RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC149 (Homo sapiens)

Ensembl gene IDs: ENSG00000181982

Ensembl transcript IDs: ENST00000324309.8, ENST00000389609.8, ENST00000502801.1, ENST00000504487.5, ENST00000507096.1, ENST00000508236.1, ENST00000512432.1, ENST00000635206.2

Found 754 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGAAGCTTTGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGGTaGGATTTAGGGAGCTCCCCCTGGATGGCCAGGCCTGGCGGGGCT +
Preference number: 1 (lower is better)
Translates to: VEALAAGRLASKESR*DLGSSPWMARPGGA
Trigger: AGCCCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 90 bp TCCTCATGCCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTaGAAGCTTTGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGGT +
Preference number: 1 (lower is better)
Translates to: SSCLRPLGSLCRLPV*KLWLLAGWPRRSPG
Trigger: ACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 90 bp AGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTTaGCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGCCT +
Preference number: 1 (lower is better)
Translates to: RFSRCSSCLRPLGSL*RLPVWKLWLLAGWP
Trigger: AGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 90 bp GCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTaGTGGCCGGCTGGCCTCGAAGGAGTCCAGGTGAGATTTAGGGAG +
Preference number: 1 (lower is better)
Translates to: ALWDPFAVFRCGSFG*WPAGLEGVQVRFRE
Trigger: CTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 90 bp TGTACCACGACAGCAGTGCTGTGGGCACAATGCCAAGCACACCCATaGCAGGCAGTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCAT +
Preference number: 1 (lower is better)
Translates to: CTTTAVLWAQCQAHP*QAVLLGPDLMGCSH
Trigger: ATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGCATTGTGCCCACAGCACTGCTGTCGTGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp CGGCTTAAGGCCCCTTCCAACTGCCAGTCTGTACCACGACAGCAGTaGTGTGGGCACAATGCCAAGCACACCCATGCCAGGCAGTCCTCC +
Preference number: 1 (lower is better)
Translates to: RLKAPSNCQSVPRQQ*CGHNAKHTHARQSS
Trigger: GGAGGACTGCCTGGCATGGGTGTGCTTGGCATTGTGCCCACAGCACTGCTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 90 bp CTCTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTaGCCGGCTGGCCTCGAAGGAGTCCAGGTGAGATTTAGGGAGCTC +
Preference number: 1 (lower is better)
Translates to: LWDPFAVFRCGSFGC*PAGLEGVQVRFREL
Trigger: GAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 90 bp CTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTaGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: LSPSGFHGAPHASAL*DPFAVFRCGSFGCW
Trigger: CCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 90 bp TTGTGTCAGATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATaGCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAG +
Preference number: 1 (lower is better)
Translates to: LCQIPLPFRFSRCSS*LRPLGSLCRLPVWK
Trigger: CTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 90 bp GGGAGACCCACCCAATGTGCATCAAAGGCCTGGGTCCTTCTGGGCTaGACTTTGAGGAGGAGCAGCATAGTAAGGGATGGGGCGCCCATT +
Preference number: 1 (lower is better)
Translates to: GRPTQCASKAWVLLG*TLRRSSIVRDGAPI
Trigger: AATGGGCGCCCCATCCCTTACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCCAGGCCTTTGATGCACATTGGGTGGGTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp GCACACCCATGCCAGGCAGTCCTCCTGGGCCCTGACTTGATGGGGTaGAGCCATGGGTCCTCTGGACACGTTTTGCTCAATTATACCTTC +
Preference number: 1 (lower is better)
Translates to: AHPCQAVLLGPDLMG*SHGSSGHVLLNYTF
Trigger: GAAGGTATAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCATGGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp ACCCAGAAGCCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTaGCAGTCTGTACCACGACAGCAGTGCTGTGGGCACAATGCCAAG +
Preference number: 1 (lower is better)
Translates to: TQKPKLLSRLKAPSN*QSVPRQQCCGHNAK
Trigger: CTTGGCATTGTGCCCACAGCACTGCTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 90 bp AAACTCCAGCTCTGGCACTCAGCACACAGGCCTCAACCGGGGCTGTaGATTTCAACCCAGAAGCCCAAACTTCTCAGCCGGCTTAAGGCC +
Preference number: 1 (lower is better)
Translates to: KLQLWHSAHRPQPGL*ISTQKPKLLSRLKA
Trigger: GGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCTGAGTGCCAGAGCTGGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 90 bp TGGGGCGCCCATTCTGCTAGCAGAGTGATTCCTGGAGATGCAATCTaGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTC +
Preference number: 1 (lower is better)
Translates to: WGAHSASRVIPGDAI*EGCIHVADPSCPDV
Trigger: GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATCTCCAGGAATCACTCTGCTAGCAGAATGGGCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp AATGTGTCATTGTGTCAGATCCCTCTCCCCTTCAGGTTTTCACGGTaGTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCG +
Preference number: 1 (lower is better)
Translates to: NVSLCQIPLPFRFSR*SSCLRPLGSLCRLP
Trigger: CGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACACAATGACACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 90 bp GCAGTTAAGGCCCAGTACAGCAGGAAGAATGATTTCTGTGACTGCTaGTCTGTGCAAGCCCTCCAGCTGCGGGAGCAACCTCCCTTGAGG +
Preference number: 1 (lower is better)
Translates to: AVKAQYSRKNDFCDC*SVQALQLREQPPLR
Trigger: CCTCAAGGGAGGTTGCTCCCGCAGCTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATCATTCTTCCTGCTGTACTGGGCCTTAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 90 bp GGTCCTTCTGGGCTGCACTTTGAGGAGGAGCAGCATAGTAAGGGATaGGGCGCCCATTCTGCTAGCAGAGTGATTCCTGGAGATGCAATC +
Preference number: 1 (lower is better)
Translates to: GPSGLHFEEEQHSKG*GAHSASRVIPGDAI
Trigger: GATTGCATCTCCAGGAATCACTCTGCTAGCAGAATGGGCGCCCCATCCCTTACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 90 bp GGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATTGTGTCAGATCCCTCTCCCCTTCAG +
Preference number: 1 (lower is better)
Translates to: GDVSAPFRCFILDPL*GFQCVIVSDPSPLQ
Trigger: CTGAAGGGGAGAGGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR TCA 90 bp GTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCT +
Preference number: 1 (lower is better)
Translates to: VFSLADSEVFQEKAT*AHHSDASFLTLSGA
Trigger: AGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp GATGGAATGTGCTGGAGTCTATTACGAGCCCTGCTTTTCAGAAGGTaGTCAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCA +
Preference number: 1 (lower is better)
Translates to: DGMCWSLLRALLFRR*STGPEDVHLADGGS
Trigger: TGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAGCACATTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR TCA 90 bp TTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTaGCCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCTC +
Preference number: 1 (lower is better)
Translates to: FRRRRRERTIPMLHS*PSLGLSMCHCVRSL
Trigger: GAGGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR TCA 90 bp GAGTCTATTACGAGCCCTGCTTTTCAGAAGGTGCTCAACAGGCCCTaGAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTG +
Preference number: 1 (lower is better)
Translates to: ESITSPAFQKVLNRP*RCASGRWWVKTRVL
Trigger: CAGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTG +
Preference number: 1 (lower is better)
Translates to: LGGISGEGDVSAPFR*FILDPLWGFQCVIV
Trigger: CACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp TTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTaGAGGCAGTTAAGGCCCAGTACAGCAGGAAGAATGATTTCTGTG +
Preference number: 1 (lower is better)
Translates to: FPSVALASYAVVLDI*RQLRPSTAGRMISV
Trigger: CACAGAAATCATTCTTCCTGCTGTACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp GTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTATTACGAGCCCTaGTTTTCAGAAGGTGCTCAACAGGCCCTGAAGATGTGCATCTGG +
Preference number: 1 (lower is better)
Translates to: VFLTLMECAGVYYEP*FSEGAQQALKMCIW
Trigger: CCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAGCACATTCCATCAGAGTCAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTaGAGTCTATTACGAGCCCTGCTTTTCAGAAGGTGCTCAACAGGC +
Preference number: 1 (lower is better)
Translates to: FSGTHCSFPDSDGMC*SLLRALLFRRCSTG
Trigger: GCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp TCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTaGAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCA +
Preference number: 1 (lower is better)
Translates to: SEYSQFATGSVRFLT*RLGGISGEGDVSAP
Trigger: TGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp TTATTAAACTTGGCTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATaGAGTAGTGCTGGACATTTGCAGGCAGTTAAGGCCCAGTACAGC +
Preference number: 1 (lower is better)
Translates to: LLNLAVFSFGGSGIL*SSAGHLQAVKAQYS
Trigger: GCTGTACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAGCCAAGTTTAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 90 bp GTTGGATGGGGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTATaGGGTGTTATCAGGGTTATATCTGTGACAGGATCAACTAACTTA +
Preference number: 1 (lower is better)
Translates to: VGWGKQGQDTRVAYL*GVIRVISVTGSTNL
Trigger: TAAGTTAGTTGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR TCA 90 bp ACACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTaGCAGGATCAACTAACTTACTGGCTCTCATTTCACCTGATAACA +
Preference number: 1 (lower is better)
Translates to: THVSRIYGVLSGLYL*QDQLTYWLSFHLIT
Trigger: TGTTATCAGGTGAAATGAGAGCCAGTAAGTTAGTTGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 90 bp TTTAATAAATCAAACTGTACTGGCATCATCAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTAT +
Preference number: 1 (lower is better)
Translates to: FNKSNCTGIIRIFTV*NRISAFSHLQTRRY
Trigger: ATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTTGATTTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR CAA 90 bp CAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTaGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: QVFTVLLMPPPSGIP*PSSGVEALAAGRLA
Trigger: GGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR TCA 90 bp GATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTGGGTGGTTCCCGCGGCTCTaGTTTGCTGGGGAGTTGACA +
Preference number: 2 (lower is better)
Translates to: DPSPLQVFTVLLMPPPSGWFPRL*FAGELT
Trigger: TGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCA...CCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR TCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGTCCTCCTGGGCCCTaGCTTGATGGGGTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSSPPGP*LDGVQP
Trigger: TGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACT...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp GTGGGGAGGGCGATAGGCTGGGACAGAAGGAAGGATGGAATACTGGACCTGGTGTGCCAAGCACACCCATaGCAGGCAGTCCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: VGRAIGWDRRKDGILDLVCQAHP*QAVLLG
Trigger: GCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGCA...CACCAGGTCCAGTATTCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 90 bp CAATGCCAAGCACACCCATGCCAGGCAGTCCTCCTGGGCCCTGACTaGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTTTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: QCQAHPCQAVLLGPD*MGCSHGSSGHVLLN
Trigger: ATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCCCTGACTTGATGGGGTaGAGCCATGGGTCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSPDLMG*SHGSSG
Trigger: TCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGG...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCCTGGATGGCCAGGCCTaGCGGGGCTGGCCCCGTCTC +
Preference number: 2 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPLDGQA*RGWPRL
Trigger: GAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR TCA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAATTCTGTTGAAGGAGTaGAGGGTTTGGAAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGILLKE*RVWKFQ
Trigger: CTGGAACTTCCAAACCCTTCACTCCTTCAACAGAAT...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAAGGCCCCTTCCAACTaGCAGTCTGTACCACGACAG +
Preference number: 2 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSKAPSN*QSVPRQ
Trigger: CTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTT...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp AAGAACCATGTTGGATGGGGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTACAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCT +
Preference number: 2 (lower is better)
Translates to: KNHVGWGKQGQDTRVAYLQEKAT*AHHSDA
Trigger: AGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTG...TAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp TTGTGTCAGATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCCGTCTCACTCCTCTaGCCTTCTATGGGACTCTCT +
Preference number: 2 (lower is better)
Translates to: LCQIPLPFRFSRCSSCLRPVSLL*PSMGLS
Trigger: AGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGG...GCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR CCA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 2 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCGAGAGGCTACCACTCTaGGAGCCTCTCTTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSERLPL*EPLFFL
Trigger: CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTC...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGATTTGCTGGGGAGTTaGCAGCGGGCCTCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDDLLGS*QRASQH
Trigger: ATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATC...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR TCA 90 bp GGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCAAAGTCCTCCTGGGCCCTaGCTTGATGGGGTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: GCIFTERLPLWEPLFFLQSPPGP*LDGVQP
Trigger: TGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACT...TTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp TTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGGTGATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 2 (lower is better)
Translates to: FRCGSFGCWPAGLEGVQVILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...CACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR CCA 90 bp AGAAGCCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTGCCAGTCTGTACGATGGGGTGCAGCCATaGGTCCTCTGGACACGTTTT +
Preference number: 2 (lower is better)
Translates to: RSPNFSAGLRPLPTASLYDGVQP*VLWTRF
Trigger: AAAACGTGTCCAGAGGACCCATGGCTGCACCCCATC...GTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp GGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGCTCCCATTTCCTCAACCGGGGCTGTaGATTTCAACCCAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GCPSHQKQQNADSSMLPFPQPGL*ISTQKP
Trigger: GGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGG...AAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTAAACCAGACCACCACTaGGAGTCCTGTTCCCCGGCT +
Preference number: 2 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSKPDHH*ESCSPA
Trigger: AGCCGGGGAACAGGACTCCCAGTGGTGGTCTGGTTT...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 90 bp GGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTTaGCTCAATTATACCTTCCTCTCCAGCTGCCTAACCTTGACCAAG +
Preference number: 2 (lower is better)
Translates to: GPDLMGCSHGSSGHV*LNYTFLSSCLTLTK
Trigger: CTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCAGGATGCATTTTCACTaGGAGGCTACCACTCTGGGA +
Preference number: 2 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVRMHFH*EATTLG
Trigger: TCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCT...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCAGCCTCTCTTTTTCCTaGAAGGAGCGCCTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVSLSFS*KERLSK
Trigger: CTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCT...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp AAGCTGACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTCAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCT +
Preference number: 2 (lower is better)
Translates to: KLTERRMLKTSHMVDTIPQEKAT*AHHSDA
Trigger: AGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTG...AGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCGTATGTGAGACAGGCTaGATGCAGAGAATGAGCATT +
Preference number: 2 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSVCETG*MQRMSI
Trigger: AATGCTCATTCTCTGCATTCAGCCTGTCTCACATAC...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 2 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSSAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp AGGCTGAATGCAGAGAATGAGCATTTCCAGGTGGTAGCTCTCATCTCATCTCACGGTGGACACGATTCCTaGGCCTGGCCCTGTTCACAG +
Preference number: 2 (lower is better)
Translates to: RLNAENEHFQVVALISSHGGHDS*AWPCSQ
Trigger: CTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACC...GTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp AACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGTGCCGTCTTCCGGTGTaGAAGCTTTGGCTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: NRISAFSHLQTRRYFRRRCRLPV*KLWLLA
Trigger: GGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCA...CCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR CCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTGATTTCTGTGACTGCTaGTCTGTGCAAGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSDFCDC*SVQALQ
Trigger: CTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATC...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCT +
Preference number: 2 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIQEKAT*AHHSDA
Trigger: AGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTG...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp GACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 2 (lower is better)
Translates to: DRKTDAENQPYGGHDSWASAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...GGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp GGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGCTCCCATTTACCTTCCTCTCCAGCTaGCTAACCTTGACCAAGATG +
Preference number: 2 (lower is better)
Translates to: GCPSHQKQQNADSSMLPFTFLSS*LTLTKM
Trigger: CATCTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGGT...AAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCCTGACTTGATGGGGTaGAGCCATGGGTCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLPDLMG*SHGSSG
Trigger: TCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGG...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTATGGGTCCTTCTGGGCTaGACTTTGAGGAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLWVLLG*TLRRSS
Trigger: GCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCCA...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp AAGAACCATGTTGGATGGGGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTAGTAGTGCTGGACATTTaGAGGCAGTTAAGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: KNHVGWGKQGQDTRVAYLVVLDI*RQLRPS
Trigger: ACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTAC...TAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTTGCAGGAAACTAGACTaGCTCCCAGCAGGTAGATCT +
Preference number: 2 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSCRKLD*LPAGRS
Trigger: AGATCTACCTGCTGGGAGCCAGTCTAGTTTCCTGCA...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAAAGCTATGGCTGGATaGCTTTTAGTTTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSKAMAG*LLVFCS
Trigger: ACTGCAGAAAACTAAAAGTCATCCAGCCATAGCTTT...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp AAGAACCATGTTGGATGGGGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTACAGCCATGGGTCCTCTaGACACGTTTTGCTCAATTA +
Preference number: 2 (lower is better)
Translates to: KNHVGWGKQGQDTRVAYLQPWVL*TRFAQL
Trigger: TAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTG...TAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp ACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTGACAGGATCAAGGGATGTATCCACGTaGCTGACCCCTCGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: TRVAYLWGVIRVISVTGSRDVST*LTPRVQ
Trigger: CTGGACACGAGGGGTCAGCCACGTGGATACATCCCT...TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCCAGCATAGTAAGGGATaGGGCGCCCATTCTGCTAGC +
Preference number: 2 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSQHSKG*GAHSAS
Trigger: GCTAGCAGAATGGGCGCCCCATCCCTTACTATGCTG...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAGTGGCCAGGGGTCAATaGGATGTCCTTCTCACCAGA +
Preference number: 2 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLVARGQ*DVLLTR
Trigger: TCTGGTGAGAAGGACATCCCATTGACCCCTGGCCAC...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAGAATACTGGACCTGGTaGCCAGGGGTCAATGGGATG +
Preference number: 2 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLEYWTW*PGVNGM
Trigger: CATCCCATTGACCCCTGGCCACCAGGTCCAGTATTC...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAATGGAATACTGGACCTaGTGGCCAGGGGTCAATGGG +
Preference number: 2 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLMEYWT*WPGVNG
Trigger: CCCATTGACCCCTGGCCACCAGGTCCAGTATTCCAT...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACCCGCGGCTCTGATTTaGTGGGGAGTTGACAGCGGG +
Preference number: 2 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSPAALI*WGVDSG
Trigger: CCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGG...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR CCA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 2 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp AGGCTGAATGCAGAGAATGAGCATTTCCAGGTGGTAGCTCTCATCTCATCTCACAAACCAGCCATATGGTaGACACGATTCCTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: RLNAENEHFQVVALISSHKPAIW*TRFLGL
Trigger: CAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTT...GTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACC +
Preference number: 2 (lower is better)
Translates to: IRIFTVCNRISAFSH*QTRRYFRRRRRERT
Trigger: GGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR CAA 90 bp TTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTaGCAGGCAGTTAAGGCCCAGTACAGCAGGAAGAATGATTTCTGT +
Preference number: 2 (lower is better)
Translates to: FSFGGSGILCSSAGH*QAVKAQYSRKNDFC
Trigger: ACAGAAATCATTCTTCCTGCTGTACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp CTCTGGACACGTTTTGCTCAATTATACCTTCCTCTCCAGCTGCCTAACCTTGACCAGAAAGACGGATGCTaGAAACCAGCCATATGGTGG +
Preference number: 2 (lower is better)
Translates to: LWTRFAQLYLPLQLPNLDQKDGC*KPAIWW
Trigger: CCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTG...GTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp TTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAAAACCAGCCATATGGTaGACACGATTCCTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: FRCFILDPLWGFQCVIVSKPAIW*TRFLGL
Trigger: CAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTT...TGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCAGGCATTCTGAGCTTTaGGATCTAGTCTCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: LCFPSVALASYAVVLDICRHSEL*DLVSGF
Trigger: AAAGCCTGAGACTAGATCCCAAAGCTCAGAATGCCT...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp GGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCAAATACAATCCTGTATGTaGGACAGGCTGAATGCAGAG +
Preference number: 2 (lower is better)
Translates to: GCIFTERLPLWEPLFFLQIQSCM*DRLNAE
Trigger: CTCTGCATTCAGCCTGTCTCACATACAGGATTGTAT...TTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 2 (lower is better)
Translates to: FATGSVRFLTCRLGGISGSAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp ACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTGACAGGATCAACCTTCCTCTCCAGCTaGCTAACCTTGACCAAGATG +
Preference number: 2 (lower is better)
Translates to: TRVAYLWGVIRVISVTGSTFLSS*LTLTKM
Trigger: CATCTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGGT...TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAAATGATTTCTGTGACTaGTGGTCTGTGCAAGCCCTC +
Preference number: 2 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLNDFCD*WSVQAL
Trigger: GAGGGCTTGCACAGACCAGCAGTCACAGAAATCATT...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp CTCTGGGAGCCTCTCTTTTTCCTGCAAGGAGCGCCTCTCAAAGGAGTGATTCTGTTCCCAAACCTGAAATaGCCATACAATCCTGTATGT +
Preference number: 2 (lower is better)
Translates to: LWEPLFFLQGAPLKGVILFPNLK*PYNPVC
Trigger: ACATACAGGATTGTATGGCCATTTCAGGTTTGGGAA...CAGAATCACTCCTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCTCCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCGTATGTGAGACAGGCTaGATGCAGAGAATGAGCATT +
Preference number: 2 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSVCETG*MQRMSI
Trigger: AATGCTCATTCTCTGCATTCAGCCTGTCTCACATAC...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAGATCTTTCCCAAACCTaGAATGGCCATACAATCCTG +
Preference number: 2 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLDLSQT*NGHTIL
Trigger: CAGGATTGTATGGCCATTTCAGGTTTGGGAAAGATC...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGTTCTGCAGTGCCGGATaGCAACTAGAAAAGCTCATT +
Preference number: 2 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLFCSAG*QLEKLI
Trigger: AATGAGCTTTTCTAGTTGGCATCCGGCACTGCAGAA...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCAGGCATTCTGAGCTTTaGGATCTAGTCTCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSRHSEL*DLVSGF
Trigger: AAAGCCTGAGACTAGATCCCAAAGCTCAGAATGCCT...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR TCA 90 bp ACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTGACAGGATCAGATCTTTCCCAAACCTaGAATGGCCATACAATCCTG +
Preference number: 2 (lower is better)
Translates to: TRVAYLWGVIRVISVTGSDLSQT*NGHTIL
Trigger: CAGGATTGTATGGCCATTTCAGGTTTGGGAAAGATC...TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TTTTATCTGAAAGGAAAGAACCAGCTAGAATTGAGCATGCCCTCCTTTCCCATCAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 2 (lower is better)
Translates to: FYLKGKNQLELSMPSFPISAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...GATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTGTGCGTTTTCTCACTTaGAGACTCGGAGGTATTTCA +
Preference number: 2 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFVRFLT*RLGGIS
Trigger: TGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCAC...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGAGACCTCTTCCAGTTCTaGAGCTGCCTGTTCCTTTGT +
Preference number: 2 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRDLFQF*SCLFLC
Trigger: ACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTC...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR GCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTT +
Preference number: 2 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPRIFTV*NRISAF
Trigger: AAACGCACTGATCCTGTTGCAAACTGTGAATATTCT...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp ACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTGACAGGATCATCAAAACCAGAGTTCTaGAGGCTGAGATTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: TRVAYLWGVIRVISVTGSSKPEF*RLRFFL
Trigger: AAGGAAAAATCTCAGCCTGCAGAACTCTGGTTTTGA...TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 90 bp ACTAGAAAAGCTCATTTTTATCTGAAAGGAAAGAACCAGCTAGAATaGAGCATGCCCTCCTTTCCCATCCCTGTATCATGTCCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: TRKAHFYLKGKNQLE*SMPSFPIPVSCPWF
Trigger: GAACCAAGGACATGATACAGGGATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAAATGAGCTTTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTT +
Preference number: 2 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIRIFTV*NRISAF
Trigger: AAACGCACTGATCCTGTTGCAAACTGTGAATATTCT...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCATTCCAGTTCTGCAGCTaGCTGTTCCTTTGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSFQFCS*LFLCQF
Trigger: AAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAA...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR CCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 2 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR GCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCAAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTT +
Preference number: 2 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSRIFTV*NRISAF
Trigger: AAACGCACTGATCCTGTTGCAAACTGTGAATATTCT...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR TCA 72 bp CTGTGCAAGCCCTCCAGCTGCGGGAGCAACCTCCCTTaGGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LCKPSSCGSNLP*GEVVGVGLVGR
Trigger: CCTCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGCTGGAGGGCTTGCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp CTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTaGAAGCTTTGGCTGCTGGCCGGCTGGCCTCGAAGG +
Preference number: 3 (lower is better)
Translates to: LRPLGSLCRLPV*KLWLLAGWPRR
Trigger: CCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR TCA 72 bp TTGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGGTaGGATTTAGGGAGCTCCCCCTGGATGGCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: LAAGRLASKESR*DLGSSPWMARP
Trigger: AGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR CAA 90 bp GTGTCAGATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCCGGTGTGGAAGCTTaGGCTGCTGGCCGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: VSDPSPLQVFTVLLMPPPSGVEA*AAGRLA
Trigger: GGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGA...GGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 72 bp CTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTaGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGGT +
Preference number: 3 (lower is better)
Translates to: LGSLCRLPVWKL*LLAGWPRRSPG
Trigger: ACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 72 bp GATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTaGTGGCCGGCTGGCCTCGAAGGAGTCCAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: DPFAVFRCGSFG*WPAGLEGVQVR
Trigger: TCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 72 bp ATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATaGCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCG +
Preference number: 3 (lower is better)
Translates to: IPLPFRFSRCSS*LRPLGSLCRLP
Trigger: CGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 72 bp CCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTaGCCGGCTGGCCTCGAAGGAGTCCAGGTGAGATTT +
Preference number: 3 (lower is better)
Translates to: PFAVFRCGSFGC*PAGLEGVQVRF
Trigger: AAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 72 bp TGCCAGGCAGTCCTCCTGGGCCCTGACTTGATGGGGTaGAGCCATGGGTCCTCTGGACACGTTTTGCTCAAT +
Preference number: 3 (lower is better)
Translates to: CQAVLLGPDLMG*SHGSSGHVLLN
Trigger: ATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp CCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTaGCAGTCTGTACCACGACAGCAGTGCTGTGGGCAC +
Preference number: 3 (lower is better)
Translates to: PKLLSRLKAPSN*QSVPRQQCCGH
Trigger: GTGCCCACAGCACTGCTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp AAAGAGCTTGCATTGGTTCCCGCGGCTCTGATTTGCTaGGGAGTTGACAGCGGGCCTCCCAGCATCCTCAGG +
Preference number: 3 (lower is better)
Translates to: KELALVPAALIC*GVDSGPPSILR
Trigger: CCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 72 bp CTCTGGCACTCAGCACACAGGCCTCAACCGGGGCTGTaGATTTCAACCCAGAAGCCCAAACTTCTCAGCCGG +
Preference number: 3 (lower is better)
Translates to: LWHSAHRPQPGL*ISTQKPKLLSR
Trigger: CCGGCTGAGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCTGAGTGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp ATGAAAGAGCTTGCATTGGTTCCCGCGGCTCTGATTTaGTGGGGAGTTGACAGCGGGCCTCCCAGCATCCTC +
Preference number: 3 (lower is better)
Translates to: MKELALVPAALI*WGVDSGPPSIL
Trigger: GAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 72 bp TTGTGTCAGATCCCTCTCCCCTTCAGGTTTTCACGGTaGTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGC +
Preference number: 3 (lower is better)
Translates to: LCQIPLPFRFSR*SSCLRPLGSLC
Trigger: GCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 72 bp TCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTaGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: SGFHGAPHASAL*DPFAVFRCGSF
Trigger: AAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR-3UTR CAA 90 bp GTGTCAGATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: VSDPSPLQVFTVLLMPPPAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...GGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CCA 72 bp GCCCAGTACAGCAGGAAGAATGATTTCTGTGACTGCTaGTCTGTGCAAGCCCTCCAGCTGCGGGAGCAACCT +
Preference number: 3 (lower is better)
Translates to: AQYSRKNDFCDC*SVQALQLREQP
Trigger: AGGTTGCTCCCGCAGCTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATCATTCTTCCTGCTGTACTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR TCA 72 bp ACGAGCCCTGCTTTTCAGAAGGTGCTCAACAGGCCCTaGAGATGTGCATCTGGCCGATGGTGGGTCAAAACC +
Preference number: 3 (lower is better)
Translates to: TSPAFQKVLNRP*RCASGRWWVKT
Trigger: GGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp ACCCAATGTGCATCAAAGGCCTGGGTCCTTCTGGGCTaGACTTTGAGGAGGAGCAGCATAGTAAGGGATGGG +
Preference number: 3 (lower is better)
Translates to: TQCASKAWVLLG*TLRRSSIVRDG
Trigger: CCCATCCCTTACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCCAGGCCTTTGATGCACATTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp TCAGAAGGTGCTCAACAGGCCCTGAAGATGTGCATCTaGCCGATGGTGGGTCAAAACCAGAGTTCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: SEGAQQALKMCI*PMVGQNQSSAG
Trigger: GCCTGCAGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR TCA 72 bp CTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCTTCATTCTTGACCCTC +
Preference number: 3 (lower is better)
Translates to: LADSEVFQEKAT*AHHSDASFLTL
Trigger: GAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp CATTCTGCTAGCAGAGTGATTCCTGGAGATGCAATCTaGGAGGGATGTATCCACGTGGCTGACCCCTCGTGT +
Preference number: 3 (lower is better)
Translates to: HSASRVIPGDAI*EGCIHVADPSC
Trigger: ACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATCTCCAGGAATCACTCTGCTAGCAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: STQASTGAVDFNPEAQTSAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR TCA 72 bp TGGAGATGCAATCTGGGAGGGATGTATCCACGTGGCTaGCCCCTCGTGTCCAGATGTCACATCTTAGTGTCA +
Preference number: 3 (lower is better)
Translates to: WRCNLGGMYPRG*PLVSRCHILVS
Trigger: TGACACTAAGATGTGACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR TCA 72 bp ATAGTAAGGGATGGGGCGCCCATTCTGCTAGCAGAGTaGTTCCTGGAGATGCAATCTGGGAGGGATGTATCC +
Preference number: 3 (lower is better)
Translates to: IVRDGAPILLAE*FLEMQSGRDVS
Trigger: GGATACATCCCTCCCAGATTGCATCTCCAGGAATCACTCTGCTAGCAGAATGGGCGCCCCATCCCTTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp GTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTaGAGGCAGTTAAGGCCCAGTACAGCAGGAAGAATG +
Preference number: 3 (lower is better)
Translates to: VALASYAVVLDI*RQLRPSTAGRM
Trigger: CATTCTTCCTGCTGTACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp TTGGCTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATaGAGTAGTGCTGGACATTTGCAGGCAGTTAAGGCC +
Preference number: 3 (lower is better)
Translates to: LAVFSFGGSGIL*SSAGHLQAVKA
Trigger: GGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp TGCTGGAGTCTATTACGAGCCCTGCTTTTCAGAAGGTaGTCAACAGGCCCTGAAGATGTGCATCTGGCCGAT +
Preference number: 3 (lower is better)
Translates to: CWSLLRALLFRR*STGPEDVHLAD
Trigger: ATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGATGAAAGAGCTTGCATaGGTTCCCGCGGCTCTGATT +
Preference number: 3 (lower is better)
Translates to: QDQCVFSLADSEVFQEKAMKELA*VPAALI
Trigger: AATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCAT...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 72 bp ATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTCTGGGGCTTTCAATGT +
Preference number: 3 (lower is better)
Translates to: ISGEGDVSAPFR*FILDPLWGFQC
Trigger: ACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp CAGAAGGTAACTGGGGTAATGAAGGATGAAAGAGCTTaGATTGGTTCCCGCGGCTCTGATTTGCTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: QKVTGVMKDERA*IGSRGSDLLGS
Trigger: ACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTTCATTACCCCAGTTACCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR GCA 72 bp TGCTTTTCAGAAGGTGCTCAACAGGCCCTGAAGATGTaGATCTGGCCGATGGTGGGTCAAAACCAGAGTTCT +
Preference number: 3 (lower is better)
Translates to: CFSEGAQQALKM*IWPMVGQNQSS
Trigger: AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp GGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTATaGGGTGTTATCAGGGTTATATCTGTGACAGGATCA +
Preference number: 3 (lower is better)
Translates to: GKQGQDTRVAYL*GVIRVISVTGS
Trigger: TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp CCTTTAATGTCTGTGGAACAGAAGAACCATGTTGGATaGGGAAAGCAGGGGCAGGACACACGTGTCGCGTAT +
Preference number: 3 (lower is better)
Translates to: PLMSVEQKNHVG*GKQGQDTRVAY
Trigger: ATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTTCTGTTCCACAGACATTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp TCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTaGAGACTCGGAGGTATTTCAGGAGAAGGCGACGTG +
Preference number: 3 (lower is better)
Translates to: SQFATGSVRFLT*RLGGISGEGDV
Trigger: CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp ACTCTGATGGAATGTGCTGGAGTCTATTACGAGCCCTaGTTTTCAGAAGGTGCTCAACAGGCCCTGAAGATG +
Preference number: 3 (lower is better)
Translates to: TLMECAGVYYEP*FSEGAQQALKM
Trigger: CATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAGCACATTCCATCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTTCCGATGCTTCATTCTaGACCCTCTCTGGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGSDASF*TLSGAF
Trigger: GAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGAAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRSAFSH*QTRRYF
Trigger: GAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACT...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGAAGAACCAGCTAGAATaGAGCATGCCCTCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLKNQLE*SMPSFP
Trigger: GGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTT...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp ACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTaGAGTCTATTACGAGCCCTGCTTTTCAGAAGGTGC +
Preference number: 3 (lower is better)
Translates to: THCSFPDSDGMC*SLLRALLFRRC
Trigger: GCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLSAFSH*QTRRYF
Trigger: GAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACT...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: FATGSVRFLTCRLGGISGSAFSH*QTRRYF
Trigger: GAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACT...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACAGAATATTCACAGTTaGCAACAGGATCAGTGCGTT +
Preference number: 3 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRQNIHS*QQDQCV
Trigger: AACGCACTGATCCTGTTGCAAACTGTGAATATTCTG...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR CCA 72 bp AGGAGTGATTCTGGTTCTCAGAGGCATTCTGAGCTTTaGGATCTAGTCTCAGGCTTTCCAGGGAAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: RSDSGSQRHSEL*DLVSGFPGKEK
Trigger: TTTTTCCTTCCCTGGAAAGCCTGAGACTAGATCCCAAAGCTCAGAATGCCTCTGAGAACCAGAATCACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp AACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCAGAATATTCACAGTTaGCAACAGGATCAGTGCGTT +
Preference number: 3 (lower is better)
Translates to: NRISAFSHLQTRRYFRRRQNIHS*QQDQCV
Trigger: AACGCACTGATCCTGTTGCAAACTGTGAATATTCTG...CCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp ACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTGACAGGATCATCCTCTGGACACGTTTaGCTCAATTATACCTTCCTC +
Preference number: 3 (lower is better)
Translates to: TRVAYLWGVIRVISVTGSSSGHV*LNYTFL
Trigger: GAGGAAGGTATAATTGAGCAAAACGTGTCCAGAGGA...TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR-3UTR CAA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
3UTR TCA 72 bp TCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTaGCAGGATCAACTAACTTACTGGCTCTCATTTCAC +
Preference number: 3 (lower is better)
Translates to: SRIYGVLSGLYL*QDQLTYWLSFH
Trigger: GTGAAATGAGAGCCAGTAAGTTAGTTGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR GCA 72 bp TCAAACTGTACTGGCATCATCAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTTTCTCACTTGCAGACT +
Preference number: 3 (lower is better)
Translates to: SNCTGIIRIFTV*NRISAFSHLQT
Trigger: AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGACAGGCCTGGCGGGGCTaGCCCCGTCTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGQAWRG*PRLTPL
Trigger: CAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTG...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCAGGCCTGGCGGGGCTaGCCCCGTCTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CRLPVWKLWLLAGWPRRSQAWRG*PRLTPL
Trigger: CAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTG...ACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CCA 90 bp TCACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTTAGGGAGCTCCCCCTaGATGGCCAGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRCSSCLRPLGSLCRLPVLGSSP*MARPGG
Trigger: CCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAA...CACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGATCACGGTGCTCCTCATaGCTCCGCCCTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGSRCSS*LRPLGS
Trigger: GGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGA...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGGTGTCGCTCACCAGCCCCTaGCAGTCGCTCTCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: FRCGSFGCWPAGLEGVQVSLTSP*QSLSVR
Trigger: CCGGACTGAGAGCGACTGGCAGGGGCTGGTGAGCGA...CACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CAA 72 bp TCTGTGCAAGCCCTCCAGCTGCGGGAGCAACCTCCCTaGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVQALQLREQPP*RRSCGGGPGGE
Trigger: CTCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGCTGGAGGGCTTGCACAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 72 bp TCTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTaGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGIPLPSSGVEA*AAGRLASKESR
Trigger: CCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
3UTR CAA 72 bp ACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTaGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVLLMPPPSGIP*PSSGVEALAAG
Trigger: GCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR TCA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAGTGCTCAACAGGCCCTaGAGATGTGCATCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGVLNRP*RCASGR
Trigger: TCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCAC...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTCCCGCGGCTCTGATTTaGTGGGGAGTTGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: VLLGPDLMGCSHGSSGHVPAALI*WGVDSG
Trigger: CCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGG...AACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTGTGGAAGCTTTGGCTaGTGGCCGGCTGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: SRCSSCLRPLGSLCRLPVCGSFG*WPAGLE
Trigger: TTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACA...CACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CCA 90 bp CTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGGCTGCTGGCCGGCTaGCCTCGAAGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPFRFSRCSSCLRPLGSLWLLAG*PRRSPG
Trigger: ACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCA...AAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR TCA 90 bp GAAGGAGTCCAGGTGAGATTTAGGGAGCTCCCCCTGGATGGCCAGGCCTGGCGGGTACTTCTTCTTCAGTaGCTGGTGGCGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: EGVQVRFRELPLDGQAWRVLLLQ*LVALPE
Trigger: CTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTAC...CCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CCA 90 bp GATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTGGGGCGGCTCTGATTTGCTaGGGAGTTGACAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: DPSPLQVFTVLLMPPPSGAALIC*GVDSGP
Trigger: AGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGC...CCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATCTGGATGGCCAGGCCTaGCGGGGCTGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHLDGQA*RGWPRL
Trigger: GAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCTGGCTGCTGGCCGGCTaGCCTCGAAGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSWLLAG*PRRSPG
Trigger: ACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCA...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CAGATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTGTCCGGTCGCCGTTCATaGCCTCCTCCTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: QIPLPFRFSRCSSCLRPLSGRRS*PPPPCA
Trigger: AGCGCATGGAGGAGGAGGCCATGAACGGCGACCGGA...CAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp GGCCAGGCCTGGCGGGGCTGGCCCCGTCTCACTCCTCTGACCTTCTATGGGACTAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQAWRGWPRLTPLTFYGTSAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...AGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCGTGACTGCTGGTCTGTaGAAGCCCTCCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSVTAGL*KPSSCG
Trigger: CCCGCAGCTGGAGGGCTTGCACAGACCAGCAGTCAC...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGCCTCCTCCTCCATaGGCTGGCCGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLWPPPP*AGRPPG
Trigger: TCCAGGAGGCCGGCCAGCGCATGGAGGAGGAGGCCA...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502801.1
ENST00000635206.2
CDS-3UTR CCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCTTAGGGAGCTCCCCCTaGATGGCCAGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLLGSSP*MARPGG
Trigger: CCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAA...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAAGGATGCATTTTCACTaGGAGGCTACCACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGRMHFH*EATTLG
Trigger: TCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCT...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTCTCCTGTCAGAGCACTaGTGCTGGATTTACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VLLGPDLMGCSHGSSGHVLLSEH*CWIYPG
Trigger: GCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAG...AACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAATGGCTGCTGGCCGGCTaGCCTCGAAGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WTRFLGLALFTVALSGRKWLLAG*PRRSPG
Trigger: ACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCA...TTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTCAGCATAGTAAGGGATaGGGCGCCCATTCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: VLLGPDLMGCSHGSSGHVQHSKG*GAHSAS
Trigger: GCTAGCAGAATGGGCGCCCCATCCCTTACTATGCTG...AACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGGGCGTCCACGTCAATaGTGCGGTTCTCGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: WTRFLGLALFTVALSGRKGRPRQ*CGSRAH
Trigger: GTGGGCACGAGAACCGCATCATTGACGTGGACGCCC...TTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCCAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCT +
Preference number: 4 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVQEKAT*AHHSDA
Trigger: AGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTG...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTTTAGCTCGCTCTAGCTaGTGCACCAAGTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: VLLGPDLMGCSHGSSGHVLARSS*CTKSSR
Trigger: GCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAA...AACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGCCTCGAAGGAGTCCAGGTGAAGGATGAAAGAGCTTaGATTGGTTCCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: FRCGSFGCWPAGLEGVQVKDERA*IGSRGS
Trigger: AGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTT...CACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp CTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGGACCTCTTCCAGTTCTaGAGCTGCCTGTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LGSLCRLPVWKLWLLAGWDLFQF*SCLFLC
Trigger: ACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTC...CCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCTGTGGAAGCTTTGGCTaGTGGCCGGCTGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVCGSFG*WPAGLE
Trigger: TTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACA...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCTCACGGTGCTCCTCATaGCTCCGCCCTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLSRCSS*LRPLGS
Trigger: GGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGA...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGTGCCAAGCACACCCATaGCAGGCAGTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSMGCPSHQKQQNADSSMCQAHP*QAVLLG
Trigger: GCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGCA...CATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGTGCCAAGCACACCCATaGCAGGCAGTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKECQAHP*QAVLLG
Trigger: GCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGCA...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGGGAAGCTTTGGCTGCTaGCCGGCTGGCCTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKEGSFGC*PAGLEG
Trigger: TCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCC...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCCGGTGTGGAAGCTTTaGCTGCTGGCCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGGISGEGDVSAPFRCFIPVWKL*LLAGWP
Trigger: AGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGG...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTGGTGGACACGATTCCTaGGCCTGGCCCTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: TDAENQPYGGHDSWAWPCGGHDS*AWPCSQ
Trigger: CTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACC...ACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACTCGCTCACCAGCCCCTaGCAGTCGCTCTCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDSLTSP*QSLSVR
Trigger: CCGGACTGAGAGCGACTGGCAGGGGCTGGTGAGCGA...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTGTAGTGCTGGACATTTaGAGGCAGTTAAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VLLGPDLMGCSHGSSGHVVVLDI*RQLRPS
Trigger: ACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTAC...AACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCGCGGCTCTGATTTGCTaGGGAGTTGACAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLAALIC*GVDSGP
Trigger: AGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGC...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCTGGATGGCCAGGCCTaGCGGGGCTGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQILDGQA*RGWPRL
Trigger: GAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTACTGGATGGCCAGGCCTaGCGGGGCTGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: IHSLQQDQCVFSLADSEVLDGQA*RGWPRL
Trigger: GAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG...TACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATGGAAGCTTTGGCTGCTaGCCGGCTGGCCTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHGSFGC*PAGLEG
Trigger: TCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCC...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTCTGGGAGCCTCTCTTTTTCCTGCAAGGAGCGCCTCTCAAAGGAGTGATTCTGGGAAGCTTTGGCTGCTaGCCGGCTGGCCTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: LWEPLFFLQGAPLKGVILGSFGC*PAGLEG
Trigger: TCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCC...CAGAATCACTCCTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCTCCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTCCGGTGTGGAAGCTTTaGCTGCTGGCCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPPVWKL*LLAGWP
Trigger: AGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGG...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTCATGCCTCCGCCCTCTaGGATCCCTTTGCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSHASAL*DPFAVF
Trigger: GAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATG...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTGGTGGACACGATTCCTaGGCCTGGCCCTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: STQASTGAVDFNPEAQTSGGHDS*AWPCSQ
Trigger: CTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACC...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GTGGGGAGGGCGATAGGCTGGGACAGAAGGAAGGATGGAATACTGGACCTGGTGGTGGCCAGGGGTCAATaGGATGTCCTTCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: VGRAIGWDRRKDGILDLVVARGQ*DVLLTR
Trigger: TCTGGTGAGAAGGACATCCCATTGACCCCTGGCCAC...CACCAGGTCCAGTATTCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTGGAGCTGATTGGCCATaGGTTTGTACTGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LPFRFSRCSSCLRPLGSLGADWP*VCTGPF
Trigger: AAAGGGACCAGTACAAACTCATGGCCAATCAGCTCC...AAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTCCCGCGGCTCTGATTTaGTGGGGAGTTGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILPAALI*WGVDSG
Trigger: CCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGG...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTGTTCCAGTTCTGCAGCTaGCTGTTCCTTTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TVLLMPPPSGIPLPSSGVFQFCS*LFLCQF
Trigger: AAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAA...CACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGTCACGGTGCTCCTCATaGCTCCGCCCTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVSRCSS*LRPLGS
Trigger: GGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGA...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GAAGGAGTCCAGGTGAGATTTAGGGAGCTCCCCCTGGATGGCCAGGCCTGGCGGGTGCGTTTTCTCACTTaGAGACTCGGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: EGVQVRFRELPLDGQAWRVRFLT*RLGGIS
Trigger: TGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCAC...CCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGGTGCTGTGGGCACAATaGCAAGCACACCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKEVLWAQ*QAHPCQ
Trigger: CTGGCATGGGTGTGCTTGGCATTGTGCCCACAGCAC...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTTGGGTCCTTCTGGGCTaGACTTTGAGGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: STQASTGAVDFNPEAQTSWVLLG*TLRRSS
Trigger: GCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCCA...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTCTGCTTTTCAGAAGGTaGTCAACAGGCCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VLLGPDLMGCSHGSSGHVLLFRR*STGPED
Trigger: ATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAG...AACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCTCAGAGCACTGCTGCTaGATTTACCCTGGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVSEHCC*IYPGPS
Trigger: CGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGA...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGTTAGGGAGCTCCCCCTaGATGGCCAGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLLGSSP*MARPGG
Trigger: CCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAA...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGATTAGGGAGCTCCCCCTaGATGGCCAGGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRLGSSP*MARPGG
Trigger: CCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAA...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGGGAAGCTTTGGCTGCTaGCCGGCTGGCCTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVGSFGC*PAGLEG
Trigger: TCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCC...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACATGCCTCCGCCCTCTaGGATCCCTTTGCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAHASAL*DPFAVF
Trigger: GAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATG...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTTCCGGTCGCCGTTCATaGCCTCCTCCTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILSGRRS*PPPPCA
Trigger: AGCGCATGGAGGAGGAGGCCATGAACGGCGACCGGA...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGAGGGATGTATCCACGTaGCTGACCCCTCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GSMGCPSHQKQQNADSSMRDVST*LTPRVQ
Trigger: CTGGACACGAGGGGTCAGCCACGTGGATACATCCCT...CATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCAAGAGAAGTTGTGGGGGTaGGCCTGGTGGGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GCIFTERLPLWEPLFFLQEKLWG*AWWGGR
Trigger: TCGCCCTCCCCACCAGGCCCACCCCCACAACTTCTC...TTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTGGCGCTCCCGGAGCTaGTTGGCCATGAGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHWRSRS*LAMSLY
Trigger: GTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCA...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACGGTGCTCCTCATGCCTCCGCCCTCTGGGATCCCTTTGCCGTCTTCCGGTGTGTTTTTCAGGAGGAAGTaGTGGATCTCCATCAATCAG +
Preference number: 4 (lower is better)
Translates to: TVLLMPPPSGIPLPSSGVFFRRK*WISINQ
Trigger: CTGATTGATGGAGATCCATCACTTCCTCCTGAAAAA...CACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR TCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGGGTTCAGCTCCTGGTTaGGCCTCTCCACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKEGSAPG*ASPLCP
Trigger: AGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACC...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGGGTTCAGCTCCTGGTTaGGCCTCTCCACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSMGCPSHQKQQNADSSMGSAPG*ASPLCP
Trigger: AGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACC...CATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAAGAGTGGGGTCGCTaGACAGTATGGTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: WTRFLGLALFTVALSGRKEEWGR*TVWCPC
Trigger: GCAAGGACACCATACTGTTCAGCGACCCCACTCTTC...TTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGATTTGCTGGGGAGTTaGCAGCGGGCCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPDLLGS*QRASQH
Trigger: ATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATC...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGGATTTGCTGGGGAGTTaGCAGCGGGCCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVDLLGS*QRASQH
Trigger: ATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATC...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCATGGTTCCCGCGGCTCTaGTTTGCTGGGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAWFPRL*FAGELT
Trigger: TGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCA...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AAGAACCATGTTGGATGGGGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTATGGTTCCCGCGGCTCTaGTTTGCTGGGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: KNHVGWGKQGQDTRVAYLWFPRL*FAGELT
Trigger: TGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCA...TAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAACCCGTCTCACTCCTCTaGCCTTCTATGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: WTRFLGLALFTVALSGRKPVSLL*PSMGLS
Trigger: AGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGG...TTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTCGAAGGAGTCCAGGTaGGATTTAGGGAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DRKTDAENQPYGGHDSWASKESR*DLGSSP
Trigger: GGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGA...GGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTTCGAAGGAGTCCAGGTaGGATTTAGGGAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGGISGEGDVSAPFRCFISKESR*DLGSSP
Trigger: GGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGA...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGCAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCT +
Preference number: 4 (lower is better)
Translates to: QDQCVFSLADSEVFQEKAQEKAT*AHHSDA
Trigger: AGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTG...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTCGCCTCTCAAAGGAGTaGTTCTGGTTCTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TDAENQPYGGHDSWAWPCRLSKE*FWFSEA
Trigger: TGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCG...ACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCATGATGCGGTTCTCGTaGCCACTCAGGATATGGTTC +
Preference number: 4 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSMMRFS*PLRIWF
Trigger: GAACCATATCCTGAGTGGGCACGAGAACCGCATCAT...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCCTCCTGTCAGAGCACTaGTGCTGGATTTACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLLLSEH*CWIYPG
Trigger: GCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAG...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCAATCACGGTGCTCCTCATaGCTCCGCCCTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: GCIFTERLPLWEPLFFLQSRCSS*LRPLGS
Trigger: GGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGA...TTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTGTACCACGACAGCAGTaGTGTGGGCACAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: STQASTGAVDFNPEAQTSVPRQQ*CGHNAK
Trigger: CTTGGCATTGTGCCCACAGCACTGCTGTCGTGGTAC...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GTGGGGAGGGCGATAGGCTGGGACAGAAGGAAGGATGGAATACTGGACCTGGTGAGCCTCTCTTTTTCCTaGAAGGAGCGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VGRAIGWDRRKDGILDLVSLSFS*KERLSK
Trigger: CTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCT...CACCAGGTCCAGTATTCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGGAGACCCACCCAATGTaGATCAAAGGCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKEETHPM*IKGLGP
Trigger: AGGACCCAGGCCTTTGATGCACATTGGGTGGGTCTC...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGCTCCCATTTCAGGCCCTGAAGATGTaGATCTGGCCGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GCPSHQKQQNADSSMLPFQALKM*IWPMVG
Trigger: ACCCACCATCGGCCAGATGCACATCTTCAGGGCCTG...AAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACAGGCCCTGAAGATGTaGATCTGGCCGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAQALKM*IWPMVG
Trigger: ACCCACCATCGGCCAGATGCACATCTTCAGGGCCTG...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATGGACTGCGGAGTAGCTaGGAGGCTGCATCCATGATC +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHGLRSS*EAASMI
Trigger: GATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCC...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGCGGCTCTGATTTGCTaGGGAGTTGACAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILAALIC*GVDSGP
Trigger: AGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGC...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGCCGGTGTGGAAGCTTTaGCTGCTGGCCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQPVWKL*LLAGWP
Trigger: AGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGG...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTCCTCAACCGGGGCTGTaGATTTCAACCCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSPQPGL*ISTQKP
Trigger: GGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGG...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTAAACCAGACCACCACTaGGAGTCCTGTTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LGGISGEGDVSAPFRCFIKPDHH*ESCSPA
Trigger: AGCCGGGGAACAGGACTCCCAGTGGTGGTCTGGTTT...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GTCCTCCTGGGCCCTGACTTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTAGGCATTCTGAGCTTTaGGATCTAGTCTCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VLLGPDLMGCSHGSSGHVRHSEL*DLVSGF
Trigger: AAAGCCTGAGACTAGATCCCAAAGCTCAGAATGCCT...AACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCGATTTCTGTGACTGCTaGTCTGTGCAAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVDFCDC*SVQALQ
Trigger: CTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATC...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTAAGAACCATGTTGGATaGGGAAAGCAGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TDAENQPYGGHDSWAWPCKNHVG*GKQGQD
Trigger: GTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT...ACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGTACTTCTTCTTCAGTaGCTGGTGGCGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPVLLLQ*LVALPE
Trigger: CTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTAC...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CCAGGCCTGGCGGGGCTGGCCCCGTCTCACTCCTCTGACCTTCTATGGGACTCTTCTCCAAGCCTTTGCTaGAGTTCTTTAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGLAGLAPSHSSDLLWDSSPSLC*SSLISS
Trigger: AGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGA...AGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR TCA 90 bp CTCTGGACACGTTTTGCTCAATTATACCTTCCTCTCCAGCTGCCTAACCTTGACGGGCGTCCACGTCAATaGTGCGGTTCTCGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LWTRFAQLYLPLQLPNLDGRPRQ*CGSRAH
Trigger: GTGGGCACGAGAACCGCATCATTGACGTGGACGCCC...GTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATGAAGAGTGGGGTCGCTaGACAGTATGGTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHEEWGR*TVWCPC
Trigger: GCAAGGACACCATACTGTTCAGCGACCCCACTCTTC...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCAAGATTTGCTGGGGAGTTaGCAGCGGGCCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GCIFTERLPLWEPLFFLQDLLGS*QRASQH
Trigger: ATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATC...TTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GAGCTTGCATTGGTTCCCGCGGCTCTGATTTGCTGGGGAGTTGACAGCGGGCCTTGGGGTAATGAAGGATaGAAGAGCTTGCATTGGTTC +
Preference number: 4 (lower is better)
Translates to: ELALVPAALICWGVDSGPWGNEG*KSLHWF
Trigger: GAACCAATGCAAGCTCTTTCATCCTTCATTACCCCA...AGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR TCA 90 bp GACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCCCCGTCTCACTCCTCTaGCCTTCTATGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: DRKTDAENQPYGGHDSWAPVSLL*PSMGLS
Trigger: AGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGG...GGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AAGCTGACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTAGTCCTCCTGGGCCCTaGCTTGATGGGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KLTERRMLKTSHMVDTIPSPPGP*LDGVQP
Trigger: TGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACT...AGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCAATGTATCCACGTGGCTaGCCCCTCGTGTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAMYPRG*PLVSRC
Trigger: ACATCTGGACACGAGGGGTCAGCCACGTGGATACAT...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTATGTATCCACGTGGCTaGCCCCTCGTGTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: LGGISGEGDVSAPFRCFIMYPRG*PLVSRC
Trigger: ACATCTGGACACGAGGGGTCAGCCACGTGGATACAT...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTACCCGCGGCTCTGATTTaGTGGGGAGTTGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLPAALI*WGVDSG
Trigger: CCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGG...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCCCTCTGGGATCCCTTTaGCGTCTTCCGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LCFPSVALASYAVVLDICPLGSL*RLPVWK
Trigger: CTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGG...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGCCTCTGGGATCCCTTTaGCGTCTTCCGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QDQCVFSLADSEVFQEKAPLGSL*RLPVWK
Trigger: CTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGG...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCAAAGGCCCCTTCCAACTaGCAGTCTGTACCACGACAG +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAKAPSN*QSVPRQ
Trigger: CTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTT...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGGTGACTGCTGGTCTGTaGAAGCCCTCCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LQQDQCVFSLADSEVFQEVTAGL*KPSSCG
Trigger: CCCGCAGCTGGAGGGCTTGCACAGACCAGCAGTCAC...CTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCAAGGTGTCCAGCTCCTTaGAGAGGATCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSARCPAP*RGSAGL
Trigger: AAGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCT...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGTGCCCACTCAGGATATaGTTCAGCTCCTGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKECPLRI*FSSWLS
Trigger: GCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCA...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTCTGCTGGATTTACCCTaGCCCTTCGAGTTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: TDAENQPYGGHDSWAWPCLLDLP*PFEFFR
Trigger: ACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAG...ACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGGGACTGCGGAGTAGCTaGGAGGCTGCATCCATGATC +
Preference number: 4 (lower is better)
Translates to: QDQCVFSLADSEVFQEKAGLRSS*EAASMI
Trigger: GATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCC...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCCTGCTTTGTTCTCAGTaGGCTGCTCGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSLLCSQ*AARQTS
Trigger: TGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAG...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACCAGGCCTGGCGGGGCTaGCCCCGTCTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADQAWRG*PRLTPL
Trigger: CAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTG...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACCAGGCCTGGCGGGGCTaGCCCCGTCTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHQAWRG*PRLTPL
Trigger: CAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTG...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTCTGGATGGCCAGGCCTaGCGGGGCTGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVLDGQA*RGWPRL
Trigger: GAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTGACAGGATCATGGCTGCTGGCCGGCTaGCCTCGAAGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRVAYLWGVIRVISVTGSWLLAG*PRRSPG
Trigger: ACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCA...TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGACCGGTGTGGAAGCTTTaGCTGCTGGCCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FATGSVRFLTCRLGGISGPVWKL*LLAGWP
Trigger: AGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGG...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGGCTGAATGCAGAGAATGAGCATTTCCAGGTGGTAGCTCTCATCTCATCTCACTCCGGTCGCCGTTCATaGCCTCCTCCTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: RLNAENEHFQVVALISSHSGRRS*PPPPCA
Trigger: AGCGCATGGAGGAGGAGGCCATGAACGGCGACCGGA...GTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGGAGCTGATTGGCCATaGGTTTGTACTGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: WTRFLGLALFTVALSGRKGADWP*VCTGPF
Trigger: AAAGGGACCAGTACAAACTCATGGCCAATCAGCTCC...TTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGGGAGCTGATTGGCCATaGGTTTGTACTGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKEGADWP*VCTGPF
Trigger: AAAGGGACCAGTACAAACTCATGGCCAATCAGCTCC...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGCGCCTCTCAAAGGAGTGATTCTGGTTCTCAGAGGCATTCTGAGCTTTGGGATGTACTTCTTCTTCAGTaGCTGGTGGCGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SASQRSDSGSQRHSELWDVLLLQ*LVALPE
Trigger: CTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTAC...ATCCCAAAGCTCAGAATGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GAAGGAGTCCAGGTGAGATTTAGGGAGCTCCCCCTGGATGGCCAGGCCTGGCGGTGTTTATTTCGGTCCTaGGAATCTCTCAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: EGVQVRFRELPLDGQAWRCLFRS*ESLNSC
Trigger: ACAACTATTGAGAGATTCTCAGGACCGAAATAAACA...CCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR TCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGGCCTCTGGTGCTGAATaGCCATGTTTTTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKEASGAE*PCFSRG
Trigger: TCCACGAGAAAAACATGGTCATTCAGCACCAGAGGC...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAGATTTGCTGGGGAGTTaGCAGCGGGCCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLDLLGS*QRASQH
Trigger: ATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATC...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTTGGTTCCCGCGGCTCTaGTTTGCTGGGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: ISAFSHLQTRRYFRRRRRWFPRL*FAGELT
Trigger: TGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCA...ACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTCCCGTCTCACTCCTCTaGCCTTCTATGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILPVSLL*PSMGLS
Trigger: AGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGG...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGAGTCCTCCTGGGCCCTaGCTTGATGGGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLQQDQCVFSLADSEVFQSPPGP*LDGVQP
Trigger: TGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACT...CTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GTGGGGAGGGCGATAGGCTGGGACAGAAGGAAGGATGGAATACTGGACCTGGTGGTATGTGAGACAGGCTaGATGCAGAGAATGAGCATT +
Preference number: 4 (lower is better)
Translates to: VGRAIGWDRRKDGILDLVVCETG*MQRMSI
Trigger: AATGCTCATTCTCTGCATTCAGCCTGTCTCACATAC...CACCAGGTCCAGTATTCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGCTCGCTCTAGCTGCTaGACCAAGTCTTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDARSSC*TKSSRS
Trigger: TGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGC...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTTTAGCTCGCTCTAGCTaGTGCACCAAGTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: LGGISGEGDVSAPFRCFILARSS*CTKSSR
Trigger: GCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAA...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTCTGTCAGAGCACTGCTaGTGGATTTACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILLSEHC*WIYPGP
Trigger: AGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAG...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGCTCCTGTCAGAGCACTaGTGCTGGATTTACCCTGGC +
Preference number: 4 (lower is better)
Translates to: QDQCVFSLADSEVFQEKALLSEH*CWIYPG
Trigger: GCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAG...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCATCCTGAACTTGCTTTaGAGACAGGACTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVILNLL*RQDSCQ
Trigger: CTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGAT...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CTCTGGGAGCCTCTCTTTTTCCTGCAAGGAGCGCCTCTCAAAGGAGTGATTCTGACAGTATGGTGTCCTTaGCCCCTGGAAGACTCCACA +
Preference number: 4 (lower is better)
Translates to: LWEPLFFLQGAPLKGVILTVWCP*PLEDST
Trigger: TGTGGAGTCTTCCAGGGGGCAAGGACACCATACTGT...CAGAATCACTCCTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCTCCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504487.5
CDS-3UTR GCA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCCCGCGGCTCTGATTTaGTGGGGAGTTGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFPAALI*WGVDSG
Trigger: CCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGG...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACCTGACTTGATGGGGTaGAGCCATGGGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRPDLMG*SHGSSG
Trigger: TCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGG...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGAGCCTCTCTTTTTCCTaGAAGGAGCGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKESLSFS*KERLSK
Trigger: CTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCT...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGAGACCCACCCAATGTaGATCAAAGGCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPETHPM*IKGLGP
Trigger: AGGACCCAGGCCTTTGATGCACATTGGGTGGGTCTC...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGAAGCCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTGCCAGTCTGTACGGCTCTGGCATCCTATaGAGTAGTGCTGGACATTTG +
Preference number: 4 (lower is better)
Translates to: RSPNFSAGLRPLPTASLYGSGIL*SSAGHL
Trigger: CAAATGTCCAGCACTACTGCATAGGATGCCAGAGCC...GTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCAGACAAACTTCAGCAGTaGGGATCTCGACCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSADKLQQ*GSRPLS
Trigger: GGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTC...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTCTGCTTTGTTCTCAGTaGGCTGCTCGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: TDAENQPYGGHDSWAWPCLLCSQ*AARQTS
Trigger: TGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAG...ACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGTGCCGTCTTCCGGTGTaGAAGCTTTGGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLCRLPV*KLWLLA
Trigger: GGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCA...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGGGTGGACACGATTCCTaGGCCTGGCCCTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NRISAFSHLQTRRYFRRRGGHDS*AWPCSQ
Trigger: CTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACC...CCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTAAACCAGCCATATGGTaGACACGATTCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSKPAIW*TRFLGL
Trigger: CAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTT...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGACAGCAGTGCTGTaGGCACAATGCCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: QDQCVFSLADSEVFQEKATTAVL*AQCQAH
Trigger: GTGTGCTTGGCATTGTGCCCACAGCACTGCTGTCGT...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGAAAACCAGACCACCACTaGGAGTCCTGTTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRKPDHH*ESCSPA
Trigger: AGCCGGGGAACAGGACTCCCAGTGGTGGTCTGGTTT...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTCCTGGAGATGCAATCTaGGAGGGATGTATCCACGTG +
Preference number: 4 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSPGDAI*EGCIHV
Trigger: CACGTGGATACATCCCTCCCAGATTGCATCTCCAGG...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGATGGAATACTGGACCTaGTGGCCAGGGGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVMEYWT*WPGVNG
Trigger: CCCATTGACCCCTGGCCACCAGGTCCAGTATTCCAT...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCGATTTCTGTGACTGCTaGTCTGTGCAAGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DRKTDAENQPYGGHDSWADFCDC*SVQALQ
Trigger: CTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATC...GGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCAGCATCTGGCCGATGGTaGGTCAAAACCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAASGRW*VKTRVL
Trigger: CAGAACTCTGGTTTTGACCCACCATCGGCCAGATGC...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 72 bp TTGATGGGGTGCAGCCATGGGTCCTCTGGACACGTTTaGCTCAATTATACCTTCCTCTCCAGCTGCCTAACC +
Preference number: 4 (lower is better)
Translates to: LMGCSHGSSGHV*LNYTFLSSCLT
Trigger: GGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACCCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 72 bp GGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTaGCAGGCAGTTAAGGCCCAGTACAGCAGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: GGSGILCSSAGH*QAVKAQYSRKN
Trigger: ATTCTTCCTGCTGTACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGAGGGAGGCTGCATCCATaGTCCTCAGATAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRGRLHP*SSDSRS
Trigger: GGATCTGCTATCTGAGGATCATGGATGCAGCCTCCC...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGATGGTTCCCGCGGCTCTaGTTTGCTGGGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRWFPRL*FAGELT
Trigger: TGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCA...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCCAGAAAGACGGATGCTaGAAACCAGCCATATGGTGG +
Preference number: 4 (lower is better)
Translates to: DRKTDAENQPYGGHDSWAQKDGC*KPAIWW
Trigger: CCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTG...GGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTACTTGGTGGCACAAATaGGGCAGCCTCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: LGGISGEGDVSAPFRCFITWWHK*GSLNIL
Trigger: CAGAATGTTGAGGCTGCCTCATTTGTGCCACCAAGT...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGAAGCCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTGCCAGTCTGTACTTCTCAGAGGCATTCTaGGCTTTGGGATCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: RSPNFSAGLRPLPTASLYFSEAF*ALGSSL
Trigger: GAGACTAGATCCCAAAGCTCAGAATGCCTCTGAGAA...GTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTGGGAGCAACCTCCCTTaGGGAGAAGTTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFGSNLP*GEVVGV
Trigger: CACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCC...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGGTGTCGCACGCCGATTaGTTCGTCTCCGAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQVSHAD*FVSEPL
Trigger: CAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACAC...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAGTGTCGCACGCCGATTaGTTCGTCTCCGAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLVSHAD*FVSEPL
Trigger: CAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACAC...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCGAAGCCTGCAGGTCGTaGTCCAGAGACTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: LCFPSVALASYAVVLDICEACRS*SRDSIC
Trigger: ACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTC...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGAAGCCTGCAGGTCGTaGTCCAGAGACTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILEACRS*SRDSIC
Trigger: ACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTC...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACTGTCAGAGCACTGCTaGTGGATTTACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRLSEHC*WIYPGP
Trigger: AGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAG...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCATCCTGAACTTGCTTTaGAGACAGGACTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLILNLL*RQDSCQ
Trigger: CTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGAT...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTTTCCAACAGGGCTGTTaGCAGAGATTTCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSFQQGC*QRFQVR
Trigger: TCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAA...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTACAGTATGGTGTCCTTaGCCCCTGGAAGACTCCACA +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILTVWCP*PLEDST
Trigger: TGTGGAGTCTTCCAGGGGGCAAGGACACCATACTGT...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389609.8
ENST00000504487.5
CDS-3UTR GCA 90 bp GGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGCTCCCATTTAAGGATGAAAGAGCTTaGATTGGTTCCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCPSHQKQQNADSSMLPFKDERA*IGSRGS
Trigger: AGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTT...AAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGATGTGGAAGCTTTGGCTaGTGGCCGGCTGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: FATGSVRFLTCRLGGISGCGSFG*WPAGLE
Trigger: TTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACA...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTCCTCTGGGATCCCTTTaGCGTCTTCCGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVIPLGSL*RLPVWK
Trigger: CTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGG...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTTTCAGGTTTTCACGGTaGTCCTCATGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: ISAFSHLQTRRYFRRRRRFRFSR*SSCLRP
Trigger: AGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAA...ACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AAGCTGACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTCCTGACTTGATGGGGTaGAGCCATGGGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KLTERRMLKTSHMVDTIPPDLMG*SHGSSG
Trigger: TCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGG...AGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCGTGCTGTGGGCACAATaGCAAGCACACCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSVLWAQ*QAHPCQ
Trigger: CTGGCATGGGTGTGCTTGGCATTGTGCCCACAGCAC...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCTGGGTCCTTCTGGGCTaGACTTTGAGGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSWVLLG*TLRRSS
Trigger: GCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCCA...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTTGGCCTCCTCCTCCATaGGCTGGCCGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLWPPPP*AGRPPG
Trigger: TCCAGGAGGCCGGCCAGCGCATGGAGGAGGAGGCCA...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502801.1
ENST00000635206.2
CDS-3UTR CCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTAGCTTGTTGTCGCCCTaGACTTCTCCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILSLLSP*TSPSLC
Trigger: GCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCT...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACTGCCCACTCAGGATATaGTTCAGCTCCTGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDCPLRI*FSSWLS
Trigger: GCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCA...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACTGCTGGATTTACCCTaGCCCTTCGAGTTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSALLDLP*PFEFFR
Trigger: ACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAG...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACAAACTTCAGCAGTaGGGATCTCGACCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILDKLQQ*GSRPLS
Trigger: GGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTC...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGGACAAACTTCAGCAGTaGGGATCTCGACCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVDKLQQ*GSRPLS
Trigger: GGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTC...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTTGCCGTCTTCCGGTGTaGAAGCTTTGGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGCRLPV*KLWLLA
Trigger: GGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCA...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGACATGCCTCCGCCCTCTaGGATCCCTTTGCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: FATGSVRFLTCRLGGISGHASAL*DPFAVF
Trigger: GAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATG...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCAAGATGGGGTGCAGCCATaGGTCCTCTGGACACGTTTT +
Preference number: 4 (lower is better)
Translates to: GCIFTERLPLWEPLFFLQDGVQP*VLWTRF
Trigger: AAAACGTGTCCAGAGGACCCATGGCTGCACCCCATC...TTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGAGAATACTGGACCTGGTaGCCAGGGGTCAATGGGATG +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRREYWTW*PGVNGM
Trigger: CATCCCATTGACCCCTGGCCACCAGGTCCAGTATTC...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAGGAAGGATGGAATACTaGACCTGGTGGCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRGRMEY*TWWPGV
Trigger: GACCCCTGGCCACCAGGTCCAGTATTCCATCCTTCC...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAGGGAGGGCGATAGGCTaGGACAGAAGGAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLGRAIG*DRRKDG
Trigger: TCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCC...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACGAGAAGTTGTGGGGGTaGGCCTGGTGGGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHEKLWG*AWWGGR
Trigger: TCGCCCTCCCCACCAGGCCCACCCCCACAACTTCTC...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AAGAACCATGTTGGATGGGGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTACTGAAGATGTGCATCTaGCCGATGGTGGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: KNHVGWGKQGQDTRVAYLLKMCI*PMVGQN
Trigger: GTTTTGACCCACCATCGGCCAGATGCACATCTTCAG...TAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGGGAGCTGATTGGCCATaGGTTTGTACTGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QDQCVFSLADSEVFQEKAGADWP*VCTGPF
Trigger: AAAGGGACCAGTACAAACTCATGGCCAATCAGCTCC...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCGCCTCTGGTGCTGAATaGCCATGTTTTTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LCFPSVALASYAVVLDICASGAE*PCFSRG
Trigger: TCCACGAGAAAAACATGGTCATTCAGCACCAGAGGC...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTGTTTGCCTCTGGTGCTaGATGACCATGTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LGGISGEGDVSAPFRCFIVCLWC*MTMFFS
Trigger: CGAGAAAAACATGGTCATTCAGCACCAGAGGCAAAC...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTTGGGGTAATGAAGGATaGAAGAGCTTGCATTGGTTC +
Preference number: 4 (lower is better)
Translates to: STQASTGAVDFNPEAQTSWGNEG*KSLHWF
Trigger: GAACCAATGCAAGCTCTTTCATCCTTCATTACCCCA...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCTCGAAGGAGTCCAGGTaGGATTTAGGGAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQISKESR*DLGSSP
Trigger: GGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGA...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACCAGAAAGACGGATGCTaGAAACCAGCCATATGGTGG +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDQKDGC*KPAIWW
Trigger: CCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTG...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCGATCTTTCCCAAACCTaGAATGGCCATACAATCCTG +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLDLSQT*NGHTIL
Trigger: CAGGATTGTATGGCCATTTCAGGTTTGGGAAAGATC...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTATTCTGTTGAAGGAGTaGAGGGTTTGGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: STQASTGAVDFNPEAQTSILLKE*RVWKFQ
Trigger: CTGGAACTTCCAAACCCTTCACTCCTTCAACAGAAT...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCAGCCTCAACATTCTGTTaGAGGAGTGAAGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAASTFC*RSEGFG
Trigger: TCCAAACCCTTCACTCCTTCAACAGAATGTTGAGGC...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCGTGCTCAACAGGCCCTaGAGATGTGCATCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIVLNRP*RCASGR
Trigger: TCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCAC...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGTTCACGCTCATGGGCTaGAAAGTGTCGCACGCCGAT +
Preference number: 4 (lower is better)
Translates to: NRISAFSHLQTRRYFRRRFTLMG*KVSHAD
Trigger: ATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAA...CCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTCGTCCACAGAAGCCTaGAGGTCGTGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRSSTEA*RSCSRD
Trigger: GTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGA...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCATTGTTCTCAGTGGGCTaGTCGACAAACTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RFLTCRLGGISGEGDVSALFSVG*STNFSS
Trigger: ACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAA...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACCCATCCTTGGGATCTaGTTTGTTCTCAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRPILGI*FVLSGL
Trigger: CAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGG...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGACCTCTTCCAGTTCTaGAGCTGCCTGTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDDLFQF*SCLFLC
Trigger: ACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTC...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGTGTGGAAGCTTTGGCTaGTGGCCGGCTGGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRCGSFG*WPAGLE
Trigger: TTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACA...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCTTCAGGTTTTCACGGTaGTCCTCATGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPFRFSR*SSCLRP
Trigger: AGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAA...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGTTCAGGTTTTCACGGTaGTCCTCATGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: NRISAFSHLQTRRYFRRRFRFSR*SSCLRP
Trigger: AGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAA...CCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTGTGCGTTTTCTCACTTaGAGACTCGGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSVRFLT*RLGGIS
Trigger: TGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCAC...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGATCGCTCACCAGCCCCTaGCAGTCGCTCTCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRSLTSP*QSLSVR
Trigger: CCGGACTGAGAGCGACTGGCAGGGGCTGGTGAGCGA...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCTTCTGCAGTGCCGGATaGCAACTAGAAAAGCTCATT +
Preference number: 4 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLFCSAG*QLEKLI
Trigger: AATGAGCTTTTCTAGTTGGCATCCGGCACTGCAGAA...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGGTCTATTACGAGCCCTaGTTTTCAGAAGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GSMGCPSHQKQQNADSSMVYYEP*FSEGAQ
Trigger: TTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGAC...CATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGAGGTGTCCAGCTCCTTaGAGAGGATCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQRCPAP*RGSAGL
Trigger: AAGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCT...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGGCTGAATGCAGAGAATGAGCATTTCCAGGTGGTAGCTCTCATCTCATCTCACAGGTGTCCAGCTCCTTaGAGAGGATCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RLNAENEHFQVVALISSHRCPAP*RGSAGL
Trigger: AAGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCT...GTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AAGCTGACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTTCAGAGCACTGCTGCTaGATTTACCCTGGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: KLTERRMLKTSHMVDTIPSEHCC*IYPGPS
Trigger: CGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGA...AGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAGGTGTCCTTGCCCCCTaGAAGACTCCACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRGVLAP*KTPQTR
Trigger: TCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACC...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389609.8
ENST00000504487.5
CDS-3UTR CCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGGGTGTCCTTGCCCCCTaGAAGACTCCACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQGVLAP*KTPQTR
Trigger: TCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACC...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389609.8
ENST00000504487.5
CDS-3UTR CCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTCAGCCATGGGTCCTCTaGACACGTTTTGCTCAATTA +
Preference number: 4 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSQPWVL*TRFAQL
Trigger: TAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTG...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGAGGCATTCTGAGCTTTaGGATCTAGTCTCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TRFLGLALFTVALSGRKERHSEL*DLVSGF
Trigger: AAAGCCTGAGACTAGATCCCAAAGCTCAGAATGCCT...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AAGCTGACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTCAGCATAGTAAGGGATaGGGCGCCCATTCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: KLTERRMLKTSHMVDTIPQHSKG*GAHSAS
Trigger: GCTAGCAGAATGGGCGCCCCATCCCTTACTATGCTG...AGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCGTGGCCAGGGGTCAATaGGATGTCCTTCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPVARGQ*DVLLTR
Trigger: TCTGGTGAGAAGGACATCCCATTGACCCCTGGCCAC...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAGAATACTGGACCTGGTaGCCAGGGGTCAATGGGATG +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRREYWTW*PGVNGM
Trigger: CATCCCATTGACCCCTGGCCACCAGGTCCAGTATTC...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGGAAGGATGGAATACTaGACCTGGTGGCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FRCFILDPLWGFQCVIVSGRMEY*TWWPGV
Trigger: GACCCCTGGCCACCAGGTCCAGTATTCCATCCTTCC...TGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGGGGAGGGCGATAGGCTaGGACAGAAGGAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRGRAIG*DRRKDG
Trigger: TCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCC...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTTGTGTTTTCCTTCGGTaGCTCTGGCATCCTATGCAG +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILCVFLR*LWHPMQ
Trigger: CTGCATAGGATGCCAGAGCCACCGAAGGAAAACACA...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACTGTGTTTTCCTTCGGTaGCTCTGGCATCCTATGCAG +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDCVFLR*LWHPMQ
Trigger: CTGCATAGGATGCCAGAGCCACCGAAGGAAAACACA...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCTGTGCATCTGGCCGATaGTGGGTCAAAACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LCFPSVALASYAVVLDICCASGR*WVKTRV
Trigger: AACTCTGGTTTTGACCCACCATCGGCCAGATGCACA...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACTGTGCATCTGGCCGATaGTGGGTCAAAACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDCASGR*WVKTRV
Trigger: AACTCTGGTTTTGACCCACCATCGGCCAGATGCACA...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGCTCCCATTTTCTGATGGAATGTGCTaGAGTCTATTACGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GCPSHQKQQNADSSMLPFSDGMC*SLLRAL
Trigger: CAGGGCTCGTAATAGACTCCAGCACATTCCATCAGA...AAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGCTCCCATTTATTGTAGCTCAGGCCTaGAAGACTCCACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: GCPSHQKQQNADSSMLPFIVAQA*KTPQTR
Trigger: TCTGGTTTGTGGAGTCTTCCAGGCCTGAGCTACAAT...AAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635206.2
CDS-3UTR TCA 90 bp CAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGTCTTCTTTAACATCCTaGAGCTCGTCCACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QDQCVFSLADSEVFQEKASSLTS*SSSTEA
Trigger: GGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGA...CGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTGGGCGTCCACGTCAATaGTGCGGTTCTCGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVGRPRQ*CGSRAH
Trigger: GTGGGCACGAGAACCGCATCATTGACGTGGACGCCC...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGGGGAGGCTGCATCCATaGTCCTCAGATAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRGRLHP*SSDSRS
Trigger: GGATCTGCTATCTGAGGATCATGGATGCAGCCTCCC...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGAGTGGGGTCGCTaGACAGTATGGTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FATGSVRFLTCRLGGISGEEWGR*TVWCPC
Trigger: GCAAGGACACCATACTGTTCAGCGACCCCACTCTTC...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTTCTTCTTCTTGCTTCTaGGCCTCCCCATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVISSSCF*ASPSLG
Trigger: TCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGA...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTCCCGTCTCACTCCTCTaGCCTTCTATGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGPVSLL*PSMGLS
Trigger: AGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGG...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTGTATGTGAGACAGGCTaGATGCAGAGAATGAGCATT +
Preference number: 4 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSVCETG*MQRMSI
Trigger: AATGCTCATTCTCTGCATTCAGCCTGTCTCACATAC...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTTTCTCAGAGGCATTCTaGGCTTTGGGATCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPFSEAF*ALGSSL
Trigger: GAGACTAGATCCCAAAGCTCAGAATGCCTCTGAGAA...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTCGCCTCTCAAAGGAGTaGTTCTGGTTCTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVIRLSKE*FWFSEA
Trigger: TGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCG...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGCTCGCTCTAGCTGCTaGACCAAGTCTTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: FRCFILDPLWGFQCVIVSARSSC*TKSSRS
Trigger: TGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGC...TGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACTTCCAACAGGGCTGTTaGCAGAGATTTCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDFQQGC*QRFQVR
Trigger: TCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAA...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCAAAAGGATGAAAGAGCTTaGATTGGTTCCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GCIFTERLPLWEPLFFLQKDERA*IGSRGS
Trigger: AGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTT...TTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCTTCAGGTTTTCACGGTaGTCCTCATGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIFRFSR*SSCLRP
Trigger: AGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAA...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGAAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRSAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTGTACCACGACAGCAGTaGTGTGGGCACAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGVPRQQ*CGHNAK
Trigger: CTTGGCATTGTGCCCACAGCACTGCTGTCGTGGTAC...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGAACAGTATGGTGTCCTTaGCCCTCCCAAATCCTACTG +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRTVWCP*PSQILL
Trigger: CAGTAGGATTTGGGAGGGGCAAGGACACCATACTGT...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635206.2
CDS-3UTR CCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCAGGTGTCCAGCTCCTTaGAGAGGATCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIRCPAP*RGSAGL
Trigger: AAGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCT...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTAGCTTGTTGTCGCCCTaGACTTCTCCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVISLLSP*TSPSLC
Trigger: GCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCT...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACATATGGTTCAGCTCCTaGTTGAGCCTCTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: GSVRFLTCRLGGISGEGDIWFSS*LSLSTL
Trigger: CAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATAT...GTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTACCATGTTTTTCTCGTaGATTGTTTCCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSTMFFS*IVSNRA
Trigger: AGCCCTGTTGGAAACAATCCACGAGAAAAACATGGT...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACGCGGCTCTGATTTGCTaGGGAGTTGACAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADAALIC*GVDSGP
Trigger: AGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGC...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GCCTGTTCCTTTGTCAGTTTAATTATTTCCCTCCCAAGGCTGTTTACTTCTTCCTGCCGTCTTCCGGTGTaGAAGCTTTGGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ACSFVSLIISLPRLFTSSCRLPV*KLWLLA
Trigger: GGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCA...GGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CCA 90 bp TTTTATCTGAAAGGAAAGAACCAGCTAGAATTGAGCATGCCCTCCTTTCCCATCCATGCCTCCGCCCTCTaGGATCCCTTTGCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: FYLKGKNQLELSMPSFPIHASAL*DPFAVF
Trigger: GAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATG...GATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAGAGAGGCTACCACTCTaGGAGCCTCTCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRERLPL*EPLFFL
Trigger: CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTC...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCGCATCTGGCCGATGGTaGGTCAAAACCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPASGRW*VKTRVL
Trigger: CAGAACTCTGGTTTTGACCCACCATCGGCCAGATGC...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCTCTGATGGAATGTGCTaGAGTCTATTACGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LCFPSVALASYAVVLDICSDGMC*SLLRAL
Trigger: CAGGGCTCGTAATAGACTCCAGCACATTCCATCAGA...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATCGTGTCGCGTATCTATaGGGTGTTATCAGGGTTATA +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHRVAYL*GVIRVI
Trigger: TATAACCCTGATAACACCCCATAGATACGCGACACG...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTAAGAACCATGTTGGATaGGGAAAGCAGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVIKNHVG*GKQGQD
Trigger: GTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACGTACTTCTTCTTCAGTaGCTGGTGGCGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADVLLLQ*LVALPE
Trigger: CTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTAC...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGCGCCTCTCAAAGGAGTGATTCTGGTTCTCAGAGGCATTCTGAGCTTTGGGATTCTTCTTTAACATCCTaGAGCTCGTCCACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SASQRSDSGSQRHSELWDSSLTS*SSSTEA
Trigger: GGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGA...ATCCCAAAGCTCAGAATGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGAAGCCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTGCCAGTCTGTACTGCTTTAATCTCTCTTaGAGGTACCTGTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: RSPNFSAGLRPLPTASLYCFNLS*RYLFSI
Trigger: TATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCA...GTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTTCTTCTTCTTGCTTCTaGGCCTCCCCATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFSSSCF*ASPSLG
Trigger: TCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGA...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACAGGAGAAGGCGACGTaGGCGCACCATTCCGATGCT +
Preference number: 4 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRQEKAT*AHHSDA
Trigger: AGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTG...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGATTCTGTTGAAGGAGTaGAGGGTTTGGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVILLKE*RVWKFQ
Trigger: CTGGAACTTCCAAACCCTTCACTCCTTCAACAGAAT...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAACTTGGTGGCACAAATaGGGCAGCCTCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLTWWHK*GSLNIL
Trigger: CAGAATGTTGAGGCTGCCTCATTTGTGCCACCAAGT...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTAAAGCTATGGCTGGATaGCTTTTAGTTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: STQASTGAVDFNPEAQTSKAMAG*LLVFCS
Trigger: ACTGCAGAAAACTAAAAGTCATCCAGCCATAGCTTT...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGAGGGAGCAACCTCCCTTaGGGAGAAGTTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRGSNLP*GEVVGV
Trigger: CACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCC...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCCAGAGTTCTGCAGGCTaGGATTTTTCCTTTTATTAT +
Preference number: 4 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVQSSAG*DFSFYY
Trigger: ATAATAAAAGGAAAAATCTCAGCCTGCAGAACTCTG...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCCCTCCCAAATCCTACTaGAACATTGTAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPPPKSY*NIVAQA
Trigger: GGCCTGAGCTACAATGTTTCAGTAGGATTTGGGAGG...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635206.2
CDS-3UTR GCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGTCCACAGAAGCCTaGAGGTCGTGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADSSTEA*RSCSRD
Trigger: GTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGA...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTCGTCCACAGAAGCCTaGAGGTCGTGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHSSTEA*RSCSRD
Trigger: GTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGA...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGAAGGATGAAAGAGCTTaGATTGGTTCCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQKDERA*IGSRGS
Trigger: AGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTT...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTTTCCAGTTCTGCAGCTaGCTGTTCCTTTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPFQFCS*LFLCQF
Trigger: AAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAA...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GCCTGTTCCTTTGTCAGTTTAATTATTTCCCTCCCAAGGCTGTTTACTTCTTCCCCTCTGGGATCCCTTTaGCGTCTTCCGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ACSFVSLIISLPRLFTSSPLGSL*RLPVWK
Trigger: CTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGG...GGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR GCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVISAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGTGCGTTTTCTCACTTaGAGACTCGGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILVRFLT*RLGGIS
Trigger: TGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCAC...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAACCTTCCTCTCCAGCTaGCTAACCTTGACCAAGATG +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLTFLSS*LTLTKM
Trigger: CATCTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGGT...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTAGTGATTCCTGGAGATaGAATCTGGGAGGGATGTAT +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPSDSWR*NLGGMY
Trigger: ATACATCCCTCCCAGATTGCATCTCCAGGAATCACT...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGCACACAGGCCTCAACCGGGGCTGTGGATTTCAACCCAGAAGCCCAAACTTCTTCAAAACCAGAGTTCTaGAGGCTGAGATTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: STQASTGAVDFNPEAQTSSKPEF*RLRFFL
Trigger: AAGGAAAAATCTCAGCCTGCAGAACTCTGGTTTTGA...AGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTAAGTCTTCACGCTCATaGGCTGCAAAGTGTCGCACG +
Preference number: 4 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGKSSRS*AAKCRT
Trigger: CGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTT...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGGTTGACCTCTTCATaGAGTTGCTTTAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSRLTSS*SCFNLS
Trigger: AGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCT...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCAAACCAGCCATATGGTaGACACGATTCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIKPAIW*TRFLGL
Trigger: CAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTT...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGTGCAGGAAACTAGACTaGCTCCCAGCAGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQCRKLD*LPAGRS
Trigger: AGATCTACCTGCTGGGAGCCAGTCTAGTTTCCTGCA...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTGAGAGGCTACCACTCTaGGAGCCTCTCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGERLPL*EPLFFL
Trigger: CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTC...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGACCTGGAGATGCAATCTaGGAGGGATGTATCCACGTG +
Preference number: 4 (lower is better)
Translates to: FATGSVRFLTCRLGGISGPGDAI*EGCIHV
Trigger: CACGTGGATACATCCCTCCCAGATTGCATCTCCAGG...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCACAGAAGAACCATGTTaGATGGGGAAAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSTEEPC*MGKAGA
Trigger: TGCCCCTGCTTTCCCCATCCAACATGGTTCTTCTGT...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGACAGAAGAACCATGTTaGATGGGGAAAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLTEEPC*MGKAGA
Trigger: TGCCCCTGCTTTCCCCATCCAACATGGTTCTTCTGT...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGCCCTTGTTGTCGCCCTaGACTTCTCCAAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRPLLSP*TSPSLC
Trigger: GCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGGG...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR TCA 90 bp AGAAGCCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTGCCAGTCTGTACTGTTTATTTCGGTCCTaGGAATCTCTCAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: RSPNFSAGLRPLPTASLYCLFRS*ESLNSC
Trigger: ACAACTATTGAGAGATTCTCAGGACCGAAATAAACA...GTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGGCTGAATGCAGAGAATGAGCATTTCCAGGTGGTAGCTCTCATCTCATCTCACTCTTCTTTAACATCCTaGAGCTCGTCCACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLNAENEHFQVVALISSHSSLTS*SSSTEA
Trigger: GGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGA...GTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACGGTTCAGCTCCTGGTTaGGCCTCTCCACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHGSAPG*ASPLCP
Trigger: AGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACC...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGCTTTAATCTCTCTTaGAGGTACCTGTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: DRKTDAENQPYGGHDSWACFNLS*RYLFSI
Trigger: TATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCA...GGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AAGCTGACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGTTTGCCTCTGGTGCTaGATGACCATGTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: KLTERRMLKTSHMVDTIPVCLWC*MTMFFS
Trigger: CGAGAAAAACATGGTCATTCAGCACCAGAGGCAAAC...AGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGATGGGGTAATGAAGGATaGAAGAGCTTGCATTGGTTC +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRWGNEG*KSLHWF
Trigger: GAACCAATGCAAGCTCTTTCATCCTTCATTACCCCA...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTCGAAGGAGTCCAGGTaGGATTTAGGGAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVSKESR*DLGSSP
Trigger: GGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGA...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTAGCCTCAACATTCTGTTaGAGGAGTGAAGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLASTFC*RSEGFG
Trigger: TCCAAACCCTTCACTCCTTCAACAGAATGTTGAGGC...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CAACAGGCCCTGAAGATGTGCATCTGGCCGATGGTGGGTCAAAACCAGAGTTCTTCAGGGTTATATCTGTaGCAGGATCAACTAACTTAC +
Preference number: 4 (lower is better)
Translates to: QQALKMCIWPMVGQNQSSSGLYL*QDQLTY
Trigger: GTAAGTTAGTTGATCCTGTCACAGATATAACCCTGA...AGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCAGTGTCGCACGCCGATTaGTTCGTCTCCGAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSVSHAD*FVSEPL
Trigger: CAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACAC...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTATGATGCGGTTCTCGTaGCCACTCAGGATATGGTTC +
Preference number: 4 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFMMRFS*PLRIWF
Trigger: GAACCATATCCTGAGTGGGCACGAGAACCGCATCAT...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAATGATGCGGTTCTCGTaGCCACTCAGGATATGGTTC +
Preference number: 4 (lower is better)
Translates to: FATGSVRFLTCRLGGISGMMRFS*PLRIWF
Trigger: GAACCATATCCTGAGTGGGCACGAGAACCGCATCAT...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGTTCCAACAGGGCTGTTaGCAGAGATTTCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQFQQGC*QRFQVR
Trigger: TCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAA...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTTTGTTCTCAGTGGGCTaGTCGACAAACTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVILFSVG*STNFSS
Trigger: ACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAA...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGTTGTTCTCAGTGGGCTaGTCGACAAACTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLLFSVG*STNFSS
Trigger: ACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAA...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGCCCATCCTTGGGATCTaGTTTGTTCTCAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRPILGI*FVLSGL
Trigger: CAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGG...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTTTCCAGTTCTGCAGCTaGCTGTTCCTTTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ISAFSHLQTRRYFRRRRRFQFCS*LFLCQF
Trigger: AAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAA...ACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTAGCGCACCATTCCGATaGTTCATTCTTGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGSAPFR*FILDPL
Trigger: GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCT...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACAAGGCCCCTTCCAACTaGCAGTCTGTACCACGACAG +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADKAPSN*QSVPRQ
Trigger: CTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTT...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCAATGATTTCTGTGACTaGTGGTCTGTGCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSNDFCD*WSVQAL
Trigger: GAGGGCTTGCACAGACCAGCAGTCACAGAAATCATT...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGAATGATTTCTGTGACTaGTGGTCTGTGCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLNDFCD*WSVQAL
Trigger: GAGGGCTTGCACAGACCAGCAGTCACAGAAATCATT...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGACTGCTTTTCAGAAGGTaGTCAACAGGCCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRLLFRR*STGPED
Trigger: ATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAG...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CTCTGGACACGTTTTGCTCAATTATACCTTCCTCTCCAGCTGCCTAACCTTGACCTCCGAGCCTTTGTTTaGCAATCGTCATCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LWTRFAQLYLPLQLPNLDLRAFV*QSSSSR
Trigger: TCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAG...GTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CCTGATAACATAAGACCCTCCCCGCTGACTACACACAGTTTAGGTTATCACTCCATATGGTTCAGCTCCTaGTTGAGCCTCTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: PDNIRPSPLTTHSLGYHSIWFSS*LSLSTL
Trigger: CAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATAT...GGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGCTGCTGGATTTACCCTaGCCCTTCGAGTTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRLLDLP*PFEFFR
Trigger: ACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAG...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGGACTGCGGAGTAGCTaGGAGGCTGCATCCATGATC +
Preference number: 4 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLGLRSS*EAASMI
Trigger: GATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCC...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGACCATGTTTTTCTCGTaGATTGTTTCCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVTMFFS*IVSNRA
Trigger: AGCCCTGTTGGAAACAATCCACGAGAAAAACATGGT...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAAACCAGCCATATGGTaGACACGATTCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRKPAIW*TRFLGL
Trigger: CAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTT...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTCTCTGGGACTCACTGCAGTTTTCCTGACTCTGATGGAATGTGCTGGAGTCTACAGCCATGGGTCCTCTaGACACGTTTTGCTCAATTA +
Preference number: 4 (lower is better)
Translates to: FSGTHCSFPDSDGMCWSLQPWVL*TRFAQL
Trigger: TAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTG...TAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACACGACAGCAGTGCTGTaGGCACAATGCCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADTTAVL*AQCQAH
Trigger: GTGTGCTTGGCATTGTGCCCACAGCACTGCTGTCGT...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTCCTCAACCGGGGCTGTaGATTTCAACCCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLPQPGL*ISTQKP
Trigger: GGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGG...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTAGGGATGTATCCACGTaGCTGACCCCTCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVRDVST*LTPRVQ
Trigger: CTGGACACGAGGGGTCAGCCACGTGGATACATCCCT...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACATGGAATACTGGACCTaGTGGCCAGGGGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADMEYWT*WPGVNG
Trigger: CCCATTGACCCCTGGCCACCAGGTCCAGTATTCCAT...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTCCAAGCCTTTGCTaGAGTTCTTTAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHSPSLC*SSLISS
Trigger: AGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGA...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGTGCTTTAATCTCTCTTaGAGGTACCTGTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVCFNLS*RYLFSI
Trigger: TATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCA...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTGGGAGGCTGCATCCATaGTCCTCAGATAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTGRLHP*SSDSRS
Trigger: GGATCTGCTATCTGAGGATCATGGATGCAGCCTCCC...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CTCTGGACACGTTTTGCTCAATTATACCTTCCTCTCCAGCTGCCTAACCTTGACTGGGGTAATGAAGGATaGAAGAGCTTGCATTGGTTC +
Preference number: 4 (lower is better)
Translates to: LWTRFAQLYLPLQLPNLDWGNEG*KSLHWF
Trigger: GAACCAATGCAAGCTCTTTCATCCTTCATTACCCCA...GTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTATTCTGCTAGCAGAGTaGTTCCTGGAGATGCAATCT +
Preference number: 4 (lower is better)
Translates to: APFRCFILDPLWGFQCVIILLAE*FLEMQS
Trigger: AGATTGCATCTCCAGGAATCACTCTGCTAGCAGAAT...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCATTCACGCTCATGGGCTaGAAAGTGTCGCACGCCGAT +
Preference number: 4 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSFTLMG*KVSHAD
Trigger: ATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAA...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCTCGCTCTAGCTGCTaGACCAAGTCTTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLARSSC*TKSSRS
Trigger: TGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGC...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTTAGCTCGCTCTAGCTaGTGCACCAAGTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADLARSS*CTKSSR
Trigger: GCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAA...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACGAAGCCTGCAGGTCGTaGTCCAGAGACTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHEACRS*SRDSIC
Trigger: ACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTC...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCTGTCAGAGCACTGCTaGTGGATTTACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTLSEHC*WIYPGP
Trigger: AGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAG...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGTTCCAGTTCTGCAGCTaGCTGTTCCTTTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: NRISAFSHLQTRRYFRRRFQFCS*LFLCQF
Trigger: AAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAA...CCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTTCAAAACCAGAGTTCTaGAGGCTGAGATTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPSKPEF*RLRFFL
Trigger: AAGGAAAAATCTCAGCCTGCAGAACTCTGGTTTTGA...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGCTCCGAGCCTTTGTTTaGCAATCGTCATCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SLQQDQCVFSLADSEVFQLRAFV*QSSSSR
Trigger: TCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAG...CTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACAAGTCTTCACGCTCATaGGCTGCAAAGTGTCGCACG +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHKSSRS*AAKCRT
Trigger: CGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTT...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCATCAGAGCACTGCTGCTaGATTTACCCTGGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSSEHCC*IYPGPS
Trigger: CGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGA...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATGATGAGTTAATGACGTaGCAACTATCCACTACTTAT +
Preference number: 4 (lower is better)
Translates to: TRRYFRRRRRERTIPMLHDELMT*QLSTTY
Trigger: ATAAGTAGTGGATAGTTGCCACGTCATTAACTCATC...ATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389609.8
CDS-3UTR CCA 90 bp AGGCTGAATGCAGAGAATGAGCATTTCCAGGTGGTAGCTCTCATCTCATCTCACTCCCTAGGATTTTGTTaGTTTGCCTCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLNAENEHFQVVALISSHSLGFC*FASGAE
Trigger: TTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGA...GTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGTCCCTAGGATTTTGTTaGTTTGCCTCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLSLGFC*FASGAE
Trigger: TTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGA...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGAATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 4 (lower is better)
Translates to: RISAFSHLQTRRYFRRRRILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...TCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTGATGGGGTGCAGCCATaGGTCCTCTGGACACGTTTT +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTDGVQP*VLWTRF
Trigger: AAAACGTGTCCAGAGGACCCATGGCTGCACCCCATC...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCGTGTCGCGTATCTATaGGGTGTTATCAGGGTTATA +
Preference number: 4 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLRVAYL*GVIRVI
Trigger: TATAACCCTGATAACACCCCATAGATACGCGACACG...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGATTTTTCAGGAGGAAGTaGTGGATCTCCATCAATCAG +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRFFRRK*WISINQ
Trigger: CTGATTGATGGAGATCCATCACTTCCTCCTGAAAAA...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTTGTTTATTTCGGTCCTaGGAATCTCTCAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPCLFRS*ESLNSC
Trigger: ACAACTATTGAGAGATTCTCAGGACCGAAATAAACA...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTTCTCCAAGCCTTTGCTaGAGTTCTTTAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGISGEGDVSAPFRCFILSPSLC*SSLISS
Trigger: AGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGA...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCATACAATCCTGTATGTaGGACAGGCTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIIQSCM*DRLNAE
Trigger: CTCTGCATTCAGCCTGTCTCACATACAGGATTGTAT...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACAGGATGCATTTTCACTaGGAGGCTACCACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADRMHFH*EATTLG
Trigger: TCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCT...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCCCATCCTTGGGATCTaGTTTGTTCTCAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTPILGI*FVLSGL
Trigger: CAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGG...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTT +
Preference number: 4 (lower is better)
Translates to: LCFPSVALASYAVVLDICRIFTV*NRISAF
Trigger: AAACGCACTGATCCTGTTGCAAACTGTGAATATTCT...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGAGTGATTCCTGGAGATaGAATCTGGGAGGGATGTAT +
Preference number: 4 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRSDSWR*NLGGMY
Trigger: ATACATCCCTCCCAGATTGCATCTCCAGGAATCACT...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACGTAGTGCTGGACATTTaGAGGCAGTTAAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADVVLDI*RQLRPS
Trigger: ACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTAC...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ACACGTGTCGCGTATCTATGGGGTGTTATCAGGGTTATATCTGTGACAGGATCAGTCTATTACGAGCCCTaGTTTTCAGAAGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TRVAYLWGVIRVISVTGSVYYEP*FSEGAQ
Trigger: TTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGAC...TGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGAAAGTCTTCACGCTCATaGGCTGCAAAGTGTCGCACG +
Preference number: 4 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRKSSRS*AAKCRT
Trigger: CGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTT...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGATGCCCACTCAGGATATaGTTCAGCTCCTGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRCPLRI*FSSWLS
Trigger: GCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCA...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCTTTTTCAGGAGGAAGTaGTGGATCTCCATCAATCAG +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIFFRRK*WISINQ
Trigger: CTGATTGATGGAGATCCATCACTTCCTCCTGAAAAA...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTTTTTTCAGGAGGAAGTaGTGGATCTCCATCAATCAG +
Preference number: 4 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFFFRRK*WISINQ
Trigger: CTGATTGATGGAGATCCATCACTTCCTCCTGAAAAA...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCAGCCTCTGGTGCTGAATaGCCATGTTTTTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSASGAE*PCFSRG
Trigger: TCCACGAGAAAAACATGGTCATTCAGCACCAGAGGC...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACGTTTGCCTCTGGTGCTaGATGACCATGTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADVCLWC*MTMFFS
Trigger: CGAGAAAAACATGGTCATTCAGCACCAGAGGCAAAC...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGATACAATCCTGTATGTaGGACAGGCTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRIQSCM*DRLNAE
Trigger: CTCTGCATTCAGCCTGTCTCACATACAGGATTGTAT...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGGATCTTTCCCAAACCTaGAATGGCCATACAATCCTG +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRDLSQT*NGHTIL
Trigger: CAGGATTGTATGGCCATTTCAGGTTTGGGAAAGATC...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTGACCTCTTCCAGTTCTaGAGCTGCCTGTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTDLFQF*SCLFLC
Trigger: ACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTC...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGACCTCTTCCAGTTCTaGAGCTGCCTGTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLDLFQF*SCLFLC
Trigger: ACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTC...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGCGCCTCTCAAAGGAGTGATTCTGGTTCTCAGAGGCATTCTGAGCTTTGGGATAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTT +
Preference number: 4 (lower is better)
Translates to: SASQRSDSGSQRHSELWDRIFTV*NRISAF
Trigger: AAACGCACTGATCCTGTTGCAAACTGTGAATATTCT...ATCCCAAAGCTCAGAATGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTACCTTCCTCTCCAGCTaGCTAACCTTGACCAAGATG +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVTFLSS*LTLTKM
Trigger: CATCTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGGT...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGATTTAGTTTTCTGCAGTaGCGGATGCCAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRFSFLQ*RMPTRK
Trigger: TTTTCTAGTTGGCATCCGGCACTGCAGAAAACTAAA...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTGGCTCTGGCATCCTATaGAGTAGTGCTGGACATTTG +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTGSGIL*SSAGHL
Trigger: CAAATGTCCAGCACTACTGCATAGGATGCCAGAGCC...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 4 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCTTCCCAAACCTGAAATaGCCATACAATCCTGTATGT +
Preference number: 4 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPFPNLK*PYNPVC
Trigger: ACATACAGGATTGTATGGCCATTTCAGGTTTGGGAA...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTTGCAGGAAACTAGACTaGCTCCCAGCAGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTCRKLD*LPAGRS
Trigger: AGATCTACCTGCTGGGAGCCAGTCTAGTTTCCTGCA...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTCTGAAGATGTGCATCTaGCCGATGGTGGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVLKMCI*PMVGQN
Trigger: GTTTTGACCCACCATCGGCCAGATGCACATCTTCAG...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCTCTCCAAGCCTTTGCTaGAGTTCTTTAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPSPSLC*SSLISS
Trigger: AGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGA...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACATTCTGCTAGCAGAGTaGTTCCTGGAGATGCAATCT +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHILLAE*FLEMQS
Trigger: AGATTGCATCTCCAGGAATCACTCTGCTAGCAGAAT...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGCAGAGTTCTGCAGGCTaGGATTTTTCCTTTTATTAT +
Preference number: 4 (lower is better)
Translates to: LQQDQCVFSLADSEVFQEQSSAG*DFSFYY
Trigger: ATAATAAAAGGAAAAATCTCAGCCTGCAGAACTCTG...CTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCTCAGGGTTATATCTGTaGCAGGATCAACTAACTTAC +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQISGLYL*QDQLTY
Trigger: GTAAGTTAGTTGATCCTGTCACAGATATAACCCTGA...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCAATCCTGAACTTGCTTTaGAGACAGGACTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSILNLL*RQDSCQ
Trigger: CTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGAT...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACGTGCGTTTTCTCACTTaGAGACTCGGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADVRFLT*RLGGIS
Trigger: TGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCAC...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGAGAATATTCACAGTTTaGAACAGGATCAGTGCGTTT +
Preference number: 4 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQRIFTV*NRISAF
Trigger: AAACGCACTGATCCTGTTGCAAACTGTGAATATTCT...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp TTTTATCTGAAAGGAAAGAACCAGCTAGAATTGAGCATGCCCTCCTTTCCCATCTTCTGCAGTGCCGGATaGCAACTAGAAAAGCTCATT +
Preference number: 4 (lower is better)
Translates to: FYLKGKNQLELSMPSFPIFCSAG*QLEKLI
Trigger: AATGAGCTTTTCTAGTTGGCATCCGGCACTGCAGAA...GATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTATATGGTTCAGCTCCTaGTTGAGCCTCTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLIWFSS*LSLSTL
Trigger: CAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATAT...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGAGGTTGACCTCTTCATaGAGTTGCTTTAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLQQDQCVFSLADSEVFQRLTSS*SCFNLS
Trigger: AGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCT...CTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTCTGCTTTGTTCTCAGTaGGCTGCTCGACAAACTTCA +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVLLCSQ*AARQTS
Trigger: TGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAG...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCTTCCCAAACCTGAAATaGCCATACAATCCTGTATGT +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIFPNLK*PYNPVC
Trigger: ACATACAGGATTGTATGGCCATTTCAGGTTTGGGAA...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
3UTR CAA 72 bp GCTCATTTTTATCTGAAAGGAAAGAACCAGCTAGAATaGAGCATGCCCTCCTTTCCCATCCCTGTATCATGT +
Preference number: 4 (lower is better)
Translates to: AHFYLKGKNQLE*SMPSFPIPVSC
Trigger: ACATGATACAGGGATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAAATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGATTTCAAGAGGTTaGCCTCTTCATGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHLISRG*PLHGVA
Trigger: AGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAA...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTTGATTTCAAGAGGTTaGCCTCTTCATGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADLISRG*PLHGVA
Trigger: AGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAA...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAAAGCTATGGCTGGATaGCTTTTAGTTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRKAMAG*LLVFCS
Trigger: ACTGCAGAAAACTAAAAGTCATCCAGCCATAGCTTT...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR GCA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGTTTAGTTTTCTGCAGTaGCGGATGCCAACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRFSFLQ*RMPTRK
Trigger: TTTTCTAGTTGGCATCCGGCACTGCAGAAAACTAAA...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCATTCAGAAGGACATCTaGACTCCAGGAAAATTTAAG +
Preference number: 4 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIIQKDI*TPGKFK
Trigger: CTTAAATTTTCCTGGAGTCCAGATGTCCTTCTGAAT...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389609.8
CDS-3UTR CCA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTCCCTAGGATTTTGTTaGTTTGCCTCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVSLGFC*FASGAE
Trigger: TTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGA...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp ATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTAGATCAACTAACTTACTaGCTCTCATTTCACCTGATA +
Preference number: 4 (lower is better)
Translates to: IHSLQQDQCVFSLADSEVDQLTY*LSFHLI
Trigger: TATCAGGTGAAATGAGAGCCAGTAAGTTAGTTGATC...TACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTTTGATTTCAAGAGGTTaGCCTCTTCATGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTLISRG*PLHGVA
Trigger: AGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAA...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACAGGTTGACCTCTTCATaGAGTTGCTTTAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADRLTSS*SCFNLS
Trigger: AGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCT...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTACCATGTTTTTCTCGTaGATTGTTTCCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLTMFFS*IVSNRA
Trigger: AGCCCTGTTGGAAACAATCCACGAGAAAAACATGGT...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGAATTCTTGACCCTCTCTaGGGCTTTCAATGTGTCATT +
Preference number: 4 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRILDPL*GFQCVI
Trigger: AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAAT...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR TCA 90 bp TTTTATCTGAAAGGAAAGAACCAGCTAGAATTGAGCATGCCCTCCTTTCCCATCTGTTTATTTCGGTCCTaGGAATCTCTCAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: FYLKGKNQLELSMPSFPICLFRS*ESLNSC
Trigger: ACAACTATTGAGAGATTCTCAGGACCGAAATAAACA...GATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CCA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACGATCAACTAACTTACTaGCTCTCATTTCACCTGATA +
Preference number: 4 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADDQLTY*LSFHLI
Trigger: TATCAGGTGAAATGAGAGCCAGTAAGTTAGTTGATC...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS GCA 90 bp GCCAGTCGCTCTCAGTCCGGTCGCCGTTCATGGCCTCCTCCTCCATaGGCTGGCCGGCCTCCTGGACCCCCGCCGCCTCCTCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: ASRSQSGRRSWPPPP*AGRPPGPPPPPPPR
Trigger: GCGAGGAGGAGGAGGCGGCGGGGGTCCAGGAGGCCGGCCAGCGCATGGAGGAGGAGGCCATGAACGGCGACCGGACTGAGAGCGACTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502801.1
ENST00000635206.2
CDS-3UTR CAA 90 bp CTGGGATCCCTTTGCCGTCTTCCGGTGTGGAAGCTTTGGCTGCTGGCCGGCTGGCAGGTGTCCAGCTCCTaGGAGAGGATCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LGSLCRLPVWKLWLLAGWQVSSS*ERISRA
Trigger: AGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCTG...CCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CAA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAAGTGTCGCACGCCGATaGCTTCGTCTCCGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGSVARR*LRLRAF
Trigger: AAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACT...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp CCAGGCCTGGCGGGGCTGGCCCCGTCTCACTCCTCTGACCTTCTATGGGACTCTCTTCTGAGCCTCCCCTaGTTGTCGCCCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: PGLAGLAPSHSSDLLWDSLLSLP*LSPWTS
Trigger: AGAAGTCCAGGGCGACAACAAGGGGAGGCTCAGAAG...AGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CAA 90 bp ACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCCGGTGTGGAAGCTTaGGCTGCTGGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: TDAENQPYGGHDSWAWPCSGVEA*AAGRLA
Trigger: GGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGA...ACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp GAAAGAGCTTGCATTGGTTCCCGCGGCTCTGATTTGCTGGGGAGTTaGCAGCGGGCCTCCCAGCATCCTCAGGCGCTGTCAACGCCTCAG +
Preference number: 5 (lower is better)
Translates to: ERACIGSRGSDLLGS*QRASQHPQALSTPQ
Trigger: CTGAGGCGTTGACAGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000507096.1
ENST00000635206.2
CDS-3UTR CAA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGATTCGTCTCCGAGCCTTaGTTTGGCAATCGTCATCCT +
Preference number: 5 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGFVSEP*FGNRHP
Trigger: AGGATGACGATTGCCAAACAAAGGCTCGGAGACGAA...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GCTGCGGGAGCAACCTCCCTTGAGGAGAAGTTGTGGGGGTGGGCCTGGTGGGGAGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: AAGATSLEEKLWGWAWWGAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...TCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCCGGGAGCAACCTCCCTaGAGGAGAAGTTGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSREQPP*RRSCGG
Trigger: ACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCG...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp TTTGAGGGGTCTCACCTTCCCTGCAGGTCCGTCGTTCCAGCTGGTTaGCATTCACTTCTGGTAGCCTCGTCCCACTTCCTTCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: FEGSHLPCRSVVPAG*HSLLVASSHFLRAH
Trigger: GTGGGCGCGAAGGAAGTGGGACGAGGCTACCAGAAGTGAATGTCAACCAGCTGGAACGACGGACCTGCAGGGAAGGTGAGACCCCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 90 bp GGCTGGGATCCTCTGCAGAGGCATGTCAGGCCGACAGCCTGTGGATaGTGTCTTTGGCAGGCAATGGGGACTCAGTCTGCTTTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GWDPLQRHVRPTACG*CLWQAMGTQSALQR
Trigger: TCTCTGCAAAGCAGACTGAGTCCCCATTGCCTGCCAAAGACAGCATCCACAGGCTGTCGGCCTGACATGCCTCTGCAGAGGATCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp CCTCTGCAGAGGCATGTCAGGCCGACAGCCTGTGGATGCTGTCTTTaGCAGGCAATGGGGACTCAGTCTGCTTTGCAGAGAAGGCTAGTG +
Preference number: 5 (lower is better)
Translates to: PLQRHVRPTACGCCL*QAMGTQSALQRRLV
Trigger: CACTAGCCTTCTCTGCAAAGCAGACTGAGTCCCCATTGCCTGCCAAAGACAGCATCCACAGGCTGTCGGCCTGACATGCCTCTGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp ATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTTCCGGTGTGGAAGCTTaGGCTGCTGGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: ISAFSHLQTRRYFRRRRRSGVEA*AAGRLA
Trigger: GGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGA...ACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GTGTCAGATCCCTCTCCCCTTCAGGTTTTCACGGTGCTCCTCATGCCTCCGCCCTCCGATGCTTCATTCTaGACCCTCTCTGGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: VSDPSPLQVFTVLLMPPPSDASF*TLSGAF
Trigger: GAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA...GGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS GCA 90 bp TCGTGCTCCAGAGACTCAATCTGTTCCTTAGCTCGCTCTAGCTGCTaGACCAAGTCTTCACGCTCATGGGCTGCAAAGTGTCGCACGCCG +
Preference number: 5 (lower is better)
Translates to: SCSRDSICSLARSSC*TKSSRSWAAKCRTP
Trigger: CGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAAGGAACAGATTGAGTCTCTGGAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS GCA 90 bp GTAGAGAGGGAAGGACGAAGCCAGCTCATGGAGGACATTTCGTGCTaGAGGGGATGCCCATTCCTTCTTCCTCCCCTGAGAAGCAACTGC +
Preference number: 5 (lower is better)
Translates to: VEREGRSQLMEDISC*RGCPFLLPPLRSNC
Trigger: GCAGTTGCTTCTCAGGGGAGGAAGAAGGAATGGGCATCCCCTGCAGCACGAAATGTCCTCCATGAGCTGGCTTCGTCCTTCCCTCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp TGTTCCTTAGCTCGCTCTAGCTGCTGCACCAAGTCTTCACGCTCATaGGCTGCAAAGTGTCGCACGCCGATTGCTTCGTCTCCGAGCCTT +
Preference number: 5 (lower is better)
Translates to: CSLARSSCCTKSSRS*AAKCRTPIASSPSL
Trigger: AAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAAGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS-3UTR CAA 90 bp AGAAGCCCAAACTTCTCAGCCGGCTTAAGGCCCCTTCCAACTGCCAGTCTGTACAGTGTCGCACGCCGATaGCTTCGTCTCCGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RSPNFSAGLRPLPTASLYSVARR*LRLRAF
Trigger: AAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACT...GTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCTCCGGTGTGGAAGCTTaGGCTGCTGGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPSGVEA*AAGRLA
Trigger: GGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGA...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp CGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCCTCTGGGATCCCTTaGCCGTCTTCCGGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: RFLTCRLGGISGEGDVSAPSGIP*PSSGVE
Trigger: TTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGG...TGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCGGGAGCAACCTCCCTaGAGGAGAAGTTGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LGGISGEGDVSAPFRCFIREQPP*RRSCGG
Trigger: ACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCG...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS GCA 90 bp TCTGTAGAGAGGGAAGGACGAAGCCAGCTCATGGAGGACATTTCGTaGTGCAGGGGATGCCCATTCCTTCTTCCTCCCCTGAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SVEREGRSQLMEDIS*CRGCPFLLPPLRSN
Trigger: GTTGCTTCTCAGGGGAGGAAGAAGGAATGGGCATCCCCTGCAGCACGAAATGTCCTCCATGAGCTGGCTTCGTCCTTCCCTCTCTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp GGGAGCAGAGGCCCAGAAGAGGAAAGATCCCATGGACCAACAAGATaGCAGCTGGTGTACTTCCTGGAGACAGGAGTGAGCAGAACATGG +
Preference number: 5 (lower is better)
Translates to: GSRGPEEERSHGPTR*QLVYFLETGVSRTW
Trigger: CCATGTTCTGCTCACTCCTGTCTCCAGGAAGTACACCAGCTGCCATCTTGTTGGTCCATGGGATCTTTCCTCTTCTGGGCCTCTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp CTCATATATTCACCACCACCTCCCCGCCATGGTAAGGCATGGGCCTaGGGGGAAGGTCTGGAGAACGAAATGTGGTGCACAGTGAAATGG +
Preference number: 5 (lower is better)
Translates to: LIYSPPPPRHGKAWA*GEGLENEMWCTVKW
Trigger: CCATTTCACTGTGCACCACATTTCGTTCTCCAGACCTTCCCCCCAGGCCCATGCCTTACCATGGCGGGGAGGTGGTGGTGAATATATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp GGGATCTGCTTTGTTCTCAGTGGGCTGCTCGACAAACTTCAGCAGTaGGGATCTCGACCTCTGTCCACTAGGAAGAGTGGGGTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: GICFVLSGLLDKLQQ*GSRPLSTRKSGVAE
Trigger: TTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000507096.1
ENST00000635206.2
CDS-3UTR CAA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGCAGGTGTCCAGCTCCTaGGAGAGGATCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVQVSSS*ERISRA
Trigger: AGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCTG...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAATCCTTGGGATCTGCTTaGTTCTCAGTGGGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: WTRFLGLALFTVALSGRKSLGSA*FSVGCS
Trigger: CGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGA...TTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCCCCTCTGGGATCCCTTaGCCGTCTTCCGGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LCFPSVALASYAVVLDICPSGIP*PSSGVE
Trigger: TTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGG...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCCTTCTGGGCTGCACTTaGAGGAGGAGCAGCATAGTA +
Preference number: 5 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVLLGCT*RRSSIV
Trigger: TACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAG...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS GCA 90 bp CACCAAGTCTTCACGCTCATGGGCTGCAAAGTGTCGCACGCCGATTaGTTCGTCTCCGAGCCTTTGTTTGGCAATCGTCATCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: HQVFTLMGCKVSHAD*FVSEPLFGNRHPQE
Trigger: CTCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS GCA 90 bp GAAGGACGAAGCCAGCTCATGGAGGACATTTCGTGCTGCAGGGGATaGCCATTCCTTCTTCCTCCCCTGAGAAGCAACTGCATTTCAGCA +
Preference number: 5 (lower is better)
Translates to: EGRSQLMEDISCCRG*PFLLPPLRSNCISA
Trigger: TGCTGAAATGCAGTTGCTTCTCAGGGGAGGAAGAAGGAATGGGCATCCCCTGCAGCACGAAATGTCCTCCATGAGCTGGCTTCGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 90 bp GACAGCCTGTGGATGCTGTCTTTGGCAGGCAATGGGGACTCAGTCTaGTTTGCAGAGAAGGCTAGTGTCATGCTCAGAACTGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: DSLWMLSLAGNGDSV*FAEKASVMLRTVAG
Trigger: GCCAGCTACAGTTCTGAGCATGACACTAGCCTTCTCTGCAAAGCAGACTGAGTCCCCATTGCCTGCCAAAGACAGCATCCACAGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp GATGGCTTCCGTTGGAGCCTCTCAAGGGTGGTAACTGTCAGGCAGTaGAAAACCAGCATAGGAGCATACGCTGCCAGGAAGGAACACCTT +
Preference number: 5 (lower is better)
Translates to: DGFRWSLSRVVTVRQ*KTSIGAYAARKEHL
Trigger: AAGGTGTTCCTTCCTGGCAGCGTATGCTCCTATGCTGGTTTTCCACTGCCTGACAGTTACCACCCTTGAGAGGCTCCAACGGAAGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 90 bp TCTCTTGAAGGTACCTGTTCTCCATACACAGGGCGTCCACGTCAATaGTGCGGTTCTCGTGCCCACTCAGGATATGGTTCAGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SLEGTCSPYTGRPRQ*CGSRAHSGYGSAPG
Trigger: ACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATGGAGAACAGGTACCTTCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS GCA 90 bp GCAGATCCTGAACTTGCTTTGCAGACAGGACTCCTGTCAGAGCACTaGTGCTGGATTTACCCTGGCCCTTCGAGTTTTTCCGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ADPELALQTGLLSEH*CWIYPGPSSFSVSP
Trigger: TGGAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS GCA 90 bp CACTTGAAGCCTAGCTTTCCAGGCCCCGCTCAGTTCTCTCACACTTaGATTTTGGTTCCAGGTGTACGTCTGTCTTGCAAGCAGGACCAG +
Preference number: 5 (lower is better)
Translates to: HLKPSFPGPAQFSHT*ILVPGVRLSCKQDQ
Trigger: CTGGTCCTGCTTGCAAGACAGACGTACACCTGGAACCAAAATGCAAGTGTGAGAGAACTGAGCGGGGCCTGGAAAGCTAGGCTTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp GGTATGGTTAGGAACACATTAGTGAATCAATCTGTCAGAGGAGGCTaGGATCCTCTGCAGAGGCATGTCAGGCCGACAGCCTGTGGATGC +
Preference number: 5 (lower is better)
Translates to: GMVRNTLVNQSVRGG*DPLQRHVRPTACGC
Trigger: GCATCCACAGGCTGTCGGCCTGACATGCCTCTGCAGAGGATCCCAGCCTCCTCTGACAGATTGATTCACTAATGTGTTCCTAACCATACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp CTCTGGACACGTTTTGCTCAATTATACCTTCCTCTCCAGCTGCCTAACCTTGACCAGGTGTCCAGCTCCTaGGAGAGGATCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LWTRFAQLYLPLQLPNLDQVSSS*ERISRA
Trigger: AGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCTG...GTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTTGGTTCAGCTCCTGGTaGAGCCTCTCCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GGISGEGDVSAPFRCFILWFSSW*SLSTLS
Trigger: GGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCA...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGTGGTTCAGCTCCTGGTaGAGCCTCTCCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVWFSSW*SLSTLS
Trigger: GGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCA...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ACACGATTCCTGGGCCTGGCCCTGTTCACAGTAGCACTCTCTGGCAGAAAAGAGGATCCTGAACTTGCTTaGCAGACAGGACTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: TRFLGLALFTVALSGRKEDPELA*QTGLLS
Trigger: TGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATC...CTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGCCCTCTGGGATCCCTTaGCCGTCTTCCGGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LQQDQCVFSLADSEVFQEPSGIP*PSSGVE
Trigger: TTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGG...CTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GATGCAATCTGGGAGGGATGTATCCACGTGGCTGACCCCTCGTGTCCAGATGTCAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: DAIWEGCIHVADPSCPDVSAFSH*QTRRYF
Trigger: GAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACT...GACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCAGGTGTCCAGCTCCTaGGAGAGGATCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIQVSSS*ERISRA
Trigger: AGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCTG...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ACAGAAAGACGGATGCTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTATCCTCAAGAGCTTGTaGTCGCCCTGGACTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TERRMLKTSHMVDTIPGPILKSL*SPWTSP
Trigger: TGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGAT...AGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GGCCAGGGGTCAATGGGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCTTTGATTTCAAGAGGTaGACCTCTTCATGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: GQGSMGCPSHQKQQNADSFDFKR*TSSWSC
Trigger: GCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAA...GGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTTCCTTGGGATCTGCTTaGTTCTCAGTGGGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: ISAFSHLQTRRYFRRRRRSLGSA*FSVGCS
Trigger: CGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGA...ACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTTCCGGTGTGGAAGCTTaGGCTGCTGGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLSGVEA*AAGRLA
Trigger: GGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGA...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GGATGTCCTTCTCACCAGAAGCAACAGAACGCCGACTCCAGCATGCTCCCATTTGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GCPSHQKQQNADSSMLPFAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...AAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGTCCGATGCTTCATTCTaGACCCTCTCTGGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVSDASF*TLSGAF
Trigger: GAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTGACCCTCTCAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: SGEGDVSAPFRCFILDPLSAFSH*QTRRYF
Trigger: GAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACT...GAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCAACAGAAGAACCATGTaGGATGGGGAAAGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LCFPSVALASYAVVLDICNRRTM*DGESRG
Trigger: GCCCCTGCTTTCCCCATCCAACATGGTTCTTCTGTT...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGCTGAGCCTCCCCTTGTaGTCGCCCTGGACTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRLSLPL*SPWTSP
Trigger: TGGAGAAGTCCAGGGCGACAACAAGGGGAGGCTCAG...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS-3UTR CAA 90 bp AAGAACCATGTTGGATGGGGAAAGCAGGGGCAGGACACACGTGTCGCGTATCTAAACAGTATGGTGTCCTaGCCCCTCCCAAATCCTACT +
Preference number: 5 (lower is better)
Translates to: KNHVGWGKQGQDTRVAYLNSMVS*PLPNPT
Trigger: AGTAGGATTTGGGAGGGGCAAGGACACCATACTGTT...TAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635206.2
CDS-3UTR CAA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGTTCGTCTCCGAGCCTTaGTTTGGCAATCGTCATCCT +
Preference number: 5 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVFVSEP*FGNRHP
Trigger: AGGATGACGATTGCCAAACAAAGGCTCGGAGACGAA...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTAACAGTATGGTGTCCTaGCCCCCTGGAAGACTCCAC +
Preference number: 5 (lower is better)
Translates to: APFRCFILDPLWGFQCVINSMVS*PPGRLH
Trigger: GTGGAGTCTTCCAGGGGGCAAGGACACCATACTGTT...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389609.8
ENST00000504487.5
CDS-3UTR CAA 90 bp CTGAAAACCAGCCATATGGTGGACACGATTCCTGGGCCTGGCCCTGTTCACAGTTCCTCTGGACACGTTTaGCTCAATTATACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LKTSHMVDTIPGPGPVHSSSGHV*LNYTFL
Trigger: GAGGAAGGTATAATTGAGCAAAACGTGTCCAGAGGA...ACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp CTCATGGTGAGAAGCCCCACTTTCTCAGTGAATGAGGAACTGTGGTaGCCTGCTGAGAATGGACCAGGGTTTAGAAGATGTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LMVRSPTFSVNEELW*PAENGPGFRRCEKA
Trigger: AGCCTTCTCACATCTTCTAAACCCTGGTCCATTCTCAGCAGGTCACCACAGTTCCTCATTCACTGAGAAAGTGGGGCTTCTCACCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 90 bp GGTGGTAACTGTCAGGCAGTGGAAAACCAGCATAGGAGCATACGCTaGCAGGAAGGAACACCTTTACTGCTATGTATAACGCTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: GGNCQAVENQHRSIR*QEGTPLLLCITLQQ
Trigger: TTGCTGGAGCGTTATACATAGCAGTAAAGGTGTTCCTTCCTGGCAGCGTATGCTCCTATGCTGGTTTTCCACTGCCTGACAGTTACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp GCTGTTGAGGAAGGAGAGGAGGCCTTCTTCAAAAACATTCCAGGCTaGGTGGTATTTTTGGGAAGGCAGCAGGGTTTAGGAAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: AVEEGEEAFFKNIPG*VVFLGRQQGLGKAL
Trigger: CAAAGCCTTTCCTAAACCCTGCTGCCTTCCCAAAAATACCACCCAGCCTGGAATGTTTTTGAAGAAGGCCTCCTCTCCTTCCTCAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAGTCATCCTCAAGAGCTaGTTGTCGCCCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRVILKS*LSPWTS
Trigger: AGAAGTCCAGGGCGACAACAAGCTCTTGAGGATGAC...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTCATCCTCAAGAGCTaGTTGTCGCCCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: APFRCFILDPLWGFQCVIVILKS*LSPWTS
Trigger: AGAAGTCCAGGGCGACAACAAGCTCTTGAGGATGAC...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGTGTCGCACGCCGATaGCTTCGTCTCCGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRSVARR*LRLRAF
Trigger: AAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACT...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATGGTTCAGCTCCTGGTaGAGCCTCTCCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: IHSLQQDQCVFSLADSEVWFSSW*SLSTLS
Trigger: GGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCA...TACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCATCCTTGGGATCTGCTTaGTTCTCAGTGGGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: FRCFILDPLWGFQCVIVSSLGSA*FSVGCS
Trigger: CGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGA...TGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGTCCGATGCTTCATTCTaGACCCTCTCTGGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LQQDQCVFSLADSEVFQESDASF*TLSGAF
Trigger: GAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA...CTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTTAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: GGISGEGDVSAPFRCFILSAFSH*QTRRYF
Trigger: GAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACT...AAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp AGCGCCTCTCAAAGGAGTGATTCTGGTTCTCAGAGGCATTCTGAGCTTTGGGATAAGAACCAGCTAGAATaGAGCATGCCCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SASQRSDSGSQRHSELWDKNQLE*SMPSFP
Trigger: GGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTT...ATCCCAAAGCTCAGAATGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTAGGATGCATTTTCACTGAGAGGCTACCACTCTGGGAGCCTCTCTTTTTCCTGCTTCTGGGCTGCACTTaGAGGAGGAGCAGCATAGTA +
Preference number: 5 (lower is better)
Translates to: LGCIFTERLPLWEPLFFLLLGCT*RRSSIV
Trigger: TACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAG...CAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp AGGCTGAATGCAGAGAATGAGCATTTCCAGGTGGTAGCTCTCATCTCATCTCACAACAGAAGAACCATGTaGGATGGGGAAAGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RLNAENEHFQVVALISSHNRRTM*DGESRG
Trigger: GCCCCTGCTTTCCCCATCCAACATGGTTCTTCTGTT...GTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp ACCACCTCGTCCACGAATGCTTTGCCACCCGGTTTGAAAGATAAATaGACCTCATATCCGTTCTTTCTCGATCACCAGGCAACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: TTSSTNALPPGLKDK*TSYPFFLDHQATAN
Trigger: GTTGGCAGTTGCCTGGTGATCGAGAAAGAACGGATATGAGGTTCATTTATCTTTCAAACCGGGTGGCAAAGCATTCGTGGACGAGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 90 bp GCCCTTGAACAACCACCTCGTCCACGAATGCTTTGCCACCCGGTTTaGAAGATAAATGAACCTCATATCCGTTCTTTCTCGATCACCAGG +
Preference number: 5 (lower is better)
Translates to: ALEQPPRPRMLCHPV*KINEPHIRSFSITR
Trigger: CCTGGTGATCGAGAAAGAACGGATATGAGGTTCATTTATCTTTCAAACCGGGTGGCAAAGCATTCGTGGACGAGGTGGTTGTTCAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 90 bp CCACCCGATTCCCTAGGATTTTGTTGGTTTGCCTCTGGTGCTGAATaGCCATGTTTTTCTCGTGGATTGTTTCCAACAGGGCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: PPDSLGFCWFASGAE*PCFSRGLFPTGLLP
Trigger: TGGCAACAGCCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGAATCGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS GCA 90 bp CTGAATGACCATGTTTTTCTCGTGGATTGTTTCCAACAGGGCTGTTaGCAGAGATTTCAGGTCAGAAATGGACTGCGGAGTAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LNDHVFLVDCFQQGC*QRFQVRNGLRSSWE
Trigger: CTCCCAGCTACTCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS GCA 90 bp AAATTACCCGTGTCATCCCTTCGAGATTGCCCTGCTTCCCTTTGCTaGTCTCCGCTTTCTTCCACATACATCTTCATCTCTGGTGCAATC +
Preference number: 5 (lower is better)
Translates to: KLPVSSLRDCPASLC*SPLSSTYIFISGAI
Trigger: GATTGCACCAGAGATGAAGATGTATGTGGAAGAAAGCGGAGAGCAGCAAAGGGAAGCAGGGCAATCTCGAAGGGATGACACGGGTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp AGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGTCATCCTCAAGAGCTaGTTGTCGCCCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: SLQQDQCVFSLADSEVFQVILKS*LSPWTS
Trigger: AGAAGTCCAGGGCGACAACAAGCTCTTGAGGATGAC...CTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp AACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGTTCGTCTCCGAGCCTTaGTTTGGCAATCGTCATCCT +
Preference number: 5 (lower is better)
Translates to: NRISAFSHLQTRRYFRRRFVSEP*FGNRHP
Trigger: AGGATGACGATTGCCAAACAAAGGCTCGGAGACGAA...CCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAGATCCTGAACTTGCTTaGCAGACAGGACTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: CNRISAFSHLQTRRYFRRDPELA*QTGLLS
Trigger: TGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATC...TCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCCGATTCCCTAGGATTTaGTTGGTTTGCCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPRFPRI*LVCLWC
Trigger: GCACCAGAGGCAAACCAACAAAATCCTAGGGAATCG...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTCGATTCCCTAGGATTTaGTTGGTTTGCCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: APFRCFILDPLWGFQCVIRFPRI*LVCLWC
Trigger: GCACCAGAGGCAAACCAACAAAATCCTAGGGAATCG...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTAGTAGTGCTGGACATTaGCAGGCAGTTAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGSSAGH*QAVKAQ
Trigger: CTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACT...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp ACAAGAGTTTGGCCACCTACTTGTTGGTTTGCCTCTGGTGCTGAATaGCCATGTTTTTCTCGTGGATTGTTTCCAACAGGGCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: TRVWPPTCWFASGAE*PCFSRGLFPTGLLP
Trigger: TGGCAACAGCCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAGTAGGTGGCCAAACTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp GCTGAAAGGATATCTGGAGAAACCATCAACCAGAAGTTGGAAATGTaGGTCTTGGTCTTGCTCTTGATGGGGTGGTGGGTACAAGAGATC +
Preference number: 5 (lower is better)
Translates to: AERISGETINQKLEM*VLVLLLMGWWVQEI
Trigger: GATCTCTTGTACCCACCACCCCATCAAGAGCAAGACCAAGACCCACATTTCCAACTTCTGGTTGATGGTTTCTCCAGATATCCTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp TGCTCAAGATGTAAAGTCCTAGGTTTCTTCATCAATTCTTCGAGATaGCTTCCGTTGGAGCCTCTCAAGGGTGGTAACTGTCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: CSRCKVLGFFINSSR*LPLEPLKGGNCQAV
Trigger: CACTGCCTGACAGTTACCACCCTTGAGAGGCTCCAACGGAAGCCATCTCGAAGAATTGATGAAGAAACCTAGGACTTTACATCTTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp TTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGATCTCCGAGCCTTTGTTaGGCAATCGTCATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: FATGSVRFLTCRLGGISGSPSLC*AIVILK
Trigger: CTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGA...TCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCATCTCCGAGCCTTTGTTaGGCAATCGTCATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: FRCFILDPLWGFQCVIVSSPSLC*AIVILK
Trigger: CTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGA...TGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp CTCGGAGGTATTTCAGGAGAAGGCGACGTGAGCGCACCATTCCGATGCTTCATTCTCTCCAGAGCATTCTaGTATTTGGCAATGTTTGAT +
Preference number: 5 (lower is better)
Translates to: LGGISGEGDVSAPFRCFILSRAF*YLAMFD
Trigger: ATCAAACATTGCCAAATACAAGAATGCTCTGGAGAG...AATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAATGAAAGAGCTTGCATaGGTTCCCGCGGCTCTGATT +
Preference number: 5 (lower is better)
Translates to: FRCFILDPLWGFQCVIVSMKELA*VPAALI
Trigger: AATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCAT...TGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCATGAAAGAGCTTGCATaGGTTCCCGCGGCTCTGATT +
Preference number: 5 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIMKELA*VPAALI
Trigger: AATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCAT...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCGCTTTCAATGTGTCATaGTGTCAGATCCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIAFNVS*CQIPLP
Trigger: GGGGAGAGGGATCTGACACAATGACACATTGAAAGC...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGAGTGCGTTTTCTCACTaGCAGACTCGGAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: SDASFLTLSGAFNVSLCQSAFSH*QTRRYF
Trigger: GAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACT...CTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGAAGGCGACGTGCAGAATATTCACAGTTaGCAACAGGATCAGTGCGTT +
Preference number: 5 (lower is better)
Translates to: SVRFLTCRLGGISGEGDVQNIHS*QQDQCV
Trigger: AACGCACTGATCCTGTTGCAAACTGTGAATATTCTG...CACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GCACCATTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTTTAAGATTCCCGTACTaGGTGGCACAAATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: APFRCFILDPLWGFQCVILRFPY*VAQMRQ
Trigger: CTGCCTCATTTGTGCCACCAAGTACGGGAATCTTAA...AATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCAAGAACCAGCTAGAATaGAGCATGCCCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIKNQLE*SMPSFP
Trigger: GGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTT...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp CAACACAAGAGTTTGGCCACCTACTTGTTGGTTTGCCTCTGGTGCTaGATGACCATGTTTTTCTCGTGGATTGTTTCCAACAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: QHKSLATYLLVCLWC*MTMFFSWIVSNRAV
Trigger: AACAGCCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAGTAGGTGGCCAAACTCTTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 90 bp TGTGTAGCTCAGAGTAAGCATTCAGTATGGCTGGTACCCTTTCCTTaGTTGGCTCCAGCTGATAGCCAAGATGCTGATATAAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CVAQSKHSVWLVPFP*LAPADSQDADIKQK
Trigger: CTTCTGCTTTATATCAGCATCTTGGCTATCAGCTGGAGCCAAGCAAGGAAAGGGTACCAGCCATACTGAATGCTTACTCTGAGCTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp CTGTGTTTTCCTTCGGTGGCTCTGGCATCCTATGCAGTAGTGCTGGACATTTGCCTCTCCAGAGCATTCTaGTATTTGGCAATGTTTGAT +
Preference number: 5 (lower is better)
Translates to: LCFPSVALASYAVVLDICLSRAF*YLAMFD
Trigger: ATCAAACATTGCCAAATACAAGAATGCTCTGGAGAG...GCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp AGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGGATCCTGAACTTGCTTaGCAGACAGGACTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: RIFTVCNRISAFSHLQTRDPELA*QTGLLS
Trigger: TGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATC...CCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGGAGTGTTTTTCTCGTGGATaGTTTCCAACAGGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LQQDQCVFSLADSEVFQECFSRG*FPTGLL
Trigger: CAACAGCCCTGTTGGAAACAATCCACGAGAAAAACA...CTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp AAACTGTACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTAACAGTATGGTGTCCTaGCCCCCTGGAAGACTCCAC +
Preference number: 5 (lower is better)
Translates to: KLYWHHQNIHSLQQDQCVNSMVS*PPGRLH
Trigger: GTGGAGTCTTCCAGGGGGCAAGGACACCATACTGTT...AACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389609.8
ENST00000504487.5
CDS-3UTR CAA 90 bp CACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTACTTTCATCTTCTTCTaGCTTCTGAGCCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: HSLQQDQCVFSLADSEVFTFIFF*LLSLPI
Trigger: GATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGT...AAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGACTTTCATCTTCTTCTaGCTTCTGAGCCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRTFIFF*LLSLPI
Trigger: GATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGT...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTCCGATGCTTCATTCTaGACCCTCTCTGGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHSDASF*TLSGAF
Trigger: GAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGA...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTTTAAGATTCCCGTACTaGGTGGCACAAATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: YSQFATGSVRFLTCRLGGLRFPY*VAQMRQ
Trigger: CTGCCTCATTTGTGCCACCAAGTACGGGAATCTTAA...ACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS CCA 90 bp GAAATACATACTACTCAGTGTGTAGCTCAGAGTAAGCATTCAGTATaGCTGGTACCCTTTCCTTGCTTGGCTCCAGCTGATAGCCAAGAT +
Preference number: 5 (lower is better)
Translates to: EIHTTQCVAQSKHSV*LVPFPCLAPADSQD
Trigger: ATCTTGGCTATCAGCTGGAGCCAAGCAAGGAAAGGGTACCAGCCATACTGAATGCTTACTCTGAGCTACACACTGAGTAGTATGTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp AGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGTATTTCAGTGTTTTTCTCGTGGATaGTTTCCAACAGGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SLQQDQCVFSLADSEVFQCFSRG*FPTGLL
Trigger: CAACAGCCCTGTTGGAAACAATCCACGAGAAAAACA...CTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTCCGATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCATGTTTTTCTCGTGGATaGTTTCCAACAGGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: FRCFILDPLWGFQCVIVSCFSRG*FPTGLL
Trigger: CAACAGCCCTGTTGGAAACAATCCACGAGAAAAACA...TGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp CATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACATGAAAGAGCTTGCATaGGTTCCCGCGGCTCTGATT +
Preference number: 5 (lower is better)
Translates to: HQNIHSLQQDQCVFSLADMKELA*VPAALI
Trigger: AATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCAT...GTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGAAGTAGTGCTGGACATTaGCAGGCAGTTAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRSSAGH*QAVKAQ
Trigger: CTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACT...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGATCTCCGAGCCTTTGTTaGGCAATCGTCATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SSEYSQFATGSVRFLTCRSPSLC*AIVILK
Trigger: CTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGA...TCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GATGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCTTTGATTTCAAGAGGTaGACCTCTTCATGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: DASFLTLSGAFNVSLCQIFDFKR*TSSWSC
Trigger: GCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAA...GATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TGCTTCATTCTTGACCCTCTCTGGGGCTTTCAATGTGTCATTGTGTCAGATCCCCTCTCCAGAGCATTCTaGTATTTGGCAATGTTTGAT +
Preference number: 5 (lower is better)
Translates to: CFILDPLWGFQCVIVSDPLSRAF*YLAMFD
Trigger: ATCAAACATTGCCAAATACAAGAATGCTCTGGAGAG...GGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGATTCCCTAGGATTTaGTTGGTTTGCCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: IRIFTVCNRISAFSHLQTRFPRI*LVCLWC
Trigger: GCACCAGAGGCAAACCAACAAAATCCTAGGGAATCG...AGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TTTTATCTGAAAGGAAAGAACCAGCTAGAATTGAGCATGCCCTCCTTTCCCATCACTTTCATCTTCTTCTaGCTTCTGAGCCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: FYLKGKNQLELSMPSFPITFIFF*LLSLPI
Trigger: GATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGT...GATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp TGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTATGAAAGAGCTTGCATaGGTTCCCGCGGCTCTGATT +
Preference number: 5 (lower is better)
Translates to: WHHQNIHSLQQDQCVFSLMKELA*VPAALI
Trigger: AATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCAT...AAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTTGCAGACTCGGAGGCAGAATATTCACAGTTaGCAACAGGATCAGTGCGTT +
Preference number: 5 (lower is better)
Translates to: IFTVCNRISAFSHLQTRRQNIHS*QQDQCV
Trigger: AACGCACTGATCCTGTTGCAAACTGTGAATATTCTG...CCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACACTTTCATCTTCTTCTaGCTTCTGAGCCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHTFIFF*LLSLPL
Trigger: CAAGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGT...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS GCA 90 bp GAACCTCATATCCGTTCTTTCTCGATCACCAGGCAACTGCCAACTTaGTGGCAAGAAGTAGCTCAAGCAAATTGCCTATTAATTGAATGT +
Preference number: 5 (lower is better)
Translates to: EPHIRSFSITRQLPT*WQEVAQANCLLIEC
Trigger: ACATTCAATTAATAGGCAATTTGCTTGAGCTACTTCTTGCCAGCAAGTTGGCAGTTGCCTGGTGATCGAGAAAGAACGGATATGAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 90 bp TTCCCTTTGCTGCTCTCCGCTTTCTTCCACATACATCTTCATCTCTaGTGCAATCTTCCCTTCACTCCAGCTTCTCTTTTTCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: FPLLLSAFFHIHLHL*CNLPFTPASLFLFC
Trigger: ACAAAATAGAAAAAGAGAAGCTGGAGTGAAGGGAAGATTGCACCAGAGATGAAGATGTATGTGGAAGAAAGCGGAGAGCAGCAAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACTCCTCTGGACACGTTTaGCTCAATTATACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHSSGHV*LNYTFL
Trigger: GAGGAAGGTATAATTGAGCAAAACGTGTCCAGAGGA...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp ACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCACCAGAATATTCACAGTTaGCAACAGGATCAGTGCGTT +
Preference number: 5 (lower is better)
Translates to: TGIIRIFTVCNRISAFSHQNIHS*QQDQCV
Trigger: AACGCACTGATCCTGTTGCAAACTGTGAATATTCTG...GTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS-3UTR CAA 90 bp GCCTGTTCCTTTGTCAGTTTAATTATTTCCCTCCCAAGGCTGTTTACTTCTTCCCAGAATATTCACAGTTaGCAACAGGATCAGTGCGTT +
Preference number: 5 (lower is better)
Translates to: ACSFVSLIISLPRLFTSSQNIHS*QQDQCV
Trigger: AACGCACTGATCCTGTTGCAAACTGTGAATATTCTG...GGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS TCA 90 bp TTTGCTTATACTGTCTATGCATCCTTTGGAAGGATATATAAGAAATaGGGAATGGACGTTTCTTCCAGGAAGGGGATTAAGGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: FAYTVYASFGRIYKK*GMDVSSRKGIKVAG
Trigger: CCCAGCTACCTTAATCCCCTTCCTGGAAGAAACGTCCATTCCTCATTTCTTATATATCCTTCCAAAGGATGCATAGACAGTATAAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS-3UTR CAA 90 bp TACTGGCATCATCAGAATATTCACAGTTTGCAACAGGATCAGTGCGTTTTCTCATTTGATTTCAAGAGGTaGACCTCTTCATGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: YWHHQNIHSLQQDQCVFSFDFKR*TSSWSC
Trigger: GCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAA...TGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp TCTCCAGAGCATTCTTGTATTTGGCAATGTTTGATTTCAAGAGGTTaGCCTCTTCATGGAGTTGCTTTAATCTCTCTTGAAGGTACCTGT +
Preference number: 5 (lower is better)
Translates to: SPEHSCIWQCLISRG*PLHGVALISLEGTC
Trigger: ACAGGTACCTTCAAGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS TCA 90 bp TTTCCTGGGAAGCTAAATGATGACTCCACCGCTGCCCAAATCATTTaGTGGAATTTCTATTTGAGAAATGCTCACTGCAAAGATGACAAT +
Preference number: 5 (lower is better)
Translates to: FPGKLNDDSTAAQII*WNFYLRNAHCKDDN
Trigger: ATTGTCATCTTTGCAGTGAGCATTTCTCAAATAGAAATTCCATCAAATGATTTGGGCAGCGGTGGAGTCATCATTTAGCTTCCCAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508236.1
CDS GCA 90 bp GAGCACAGGTTGCATGCCCACAAAGCCAACCCCATGTGTAGTATTTaGTACTTTAATTTATTGTTTATTCACCATTCTCTGAACACTCTT +
Preference number: 5 (lower is better)
Translates to: EHRLHAHKANPMCSI*YFNLLFIHHSLNTL
Trigger: AAGAGTGTTCAGAGAATGGTGAATAAACAATAAATTAAAGTAGCAAATACTACACATGGGGTTGGCTTTGTGGGCATGCAACCTGTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp TGCATTGGTTCCCGCGGCTCTGATTTGCTGGGGAGTTaGCAGCGGGCCTCCCAGCATCCTCAGGCGCTGTCA +
Preference number: 6 (lower is better)
Translates to: CIGSRGSDLLGS*QRASQHPQALS
Trigger: TGACAGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000507096.1
ENST00000635206.2
CDS GCA 72 bp TTCCTCTTACACACCAGGTACTCGCTCACCAGCCCCTaGCAGTCGCTCTCAGTCCGGTCGCCGTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: FLLHTRYSLTSP*QSLSVRSPFMA
Trigger: GGCCATGAACGGCGACCGGACTGAGAGCGACTGGCAGGGGCTGGTGAGCGAGTACCTGGTGTGTAAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS CCA 72 bp TCACCACCACCTCCCCGCCATGGTAAGGCATGGGCCTaGGGGGAAGGTCTGGAGAACGAAATGTGGTGCACA +
Preference number: 6 (lower is better)
Translates to: SPPPPRHGKAWA*GEGLENEMWCT
Trigger: TGTGCACCACATTTCGTTCTCCAGACCTTCCCCCCAGGCCCATGCCTTACCATGGCGGGGAGGTGGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp CCTCTGCAGAGGCATGTCAGGCCGACAGCCTGTGGATaGTGTCTTTGGCAGGCAATGGGGACTCAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: PLQRHVRPTACG*CLWQAMGTQSA
Trigger: AGCAGACTGAGTCCCCATTGCCTGCCAAAGACAGCATCCACAGGCTGTCGGCCTGACATGCCTCTGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp AGGGAAGGACGAAGCCAGCTCATGGAGGACATTTCGTaGTGCAGGGGATGCCCATTCCTTCTTCCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: REGRSQLMEDIS*CRGCPFLLPPL
Trigger: CAGGGGAGGAAGAAGGAATGGGCATCCCCTGCAGCACGAAATGTCCTCCATGAGCTGGCTTCGTCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp GGGGTCTCACCTTCCCTGCAGGTCCGTCGTTCCAGCTaGTTGACATTCACTTCTGGTAGCCTCGTCCCACTT +
Preference number: 6 (lower is better)
Translates to: GVSPSLQVRRSS*LTFTSGSLVPL
Trigger: AAGTGGGACGAGGCTACCAGAAGTGAATGTCAACCAGCTGGAACGACGGACCTGCAGGGAAGGTGAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp GAGGCATGTCAGGCCGACAGCCTGTGGATGCTGTCTTaGGCAGGCAATGGGGACTCAGTCTGCTTTGCAGAG +
Preference number: 6 (lower is better)
Translates to: EACQADSLWMLS*AGNGDSVCFAE
Trigger: CTCTGCAAAGCAGACTGAGTCCCCATTGCCTGCCAAAGACAGCATCCACAGGCTGTCGGCCTGACATGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp TCCTCTGCAGAGGCATGTCAGGCCGACAGCCTGTGGATGCTGTCTTaGGCAGGCAATGGGGACTCAGTCTGCTTTGCAGAGAAGGCTAGT +
Preference number: 6 (lower is better)
Translates to: SSAEACQADSLWMLS*AGNGDSVCFAEKAS
Trigger: ACTAGCCTTCTCTGCAAAGCAGACTGAGTCCCCATTGCCTGCCAAAGACAGCATCCACAGGCTGTCGGCCTGACATGCCTCTGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp AGCCAGCTCATGGAGGACATTTCGTGCTGCAGGGGATaGCCATTCCTTCTTCCTCCCCTGAGAAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: SQLMEDISCCRG*PFLLPPLRSNC
Trigger: GCAGTTGCTTCTCAGGGGAGGAAGAAGGAATGGGCATCCCCTGCAGCACGAAATGTCCTCCATGAGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp GAAGGACGAAGCCAGCTCATGGAGGACATTTCGTGCTaGAGGGGATGCCCATTCCTTCTTCCTCCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: EGRSQLMEDISC*RGCPFLLPPLR
Trigger: TCTCAGGGGAGGAAGAAGGAATGGGCATCCCCTGCAGCACGAAATGTCCTCCATGAGCTGGCTTCGTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp AATCGGCACAGGGCTGGCTACCCACAGACACTACCATaGAAGGGAAGCCTGCTACGACTGCTGACATGCTCC +
Preference number: 6 (lower is better)
Translates to: NRHRAGYPQTLP*KGSLLRLLTCS
Trigger: GGAGCATGTCAGCAGTCGTAGCAGGCTTCCCTTCAATGGTAGTGTCTGTGGGTAGCCAGCCCTGTGCCGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507096.1
CDS TCA 72 bp TCAGTGACTGGTGGCGCTCCCGGAGCTGATTGGCCATaGGTTTGTACTGGTCCCTTTCCTGTTGACAGGTGT +
Preference number: 6 (lower is better)
Translates to: SVTGGAPGADWP*VCTGPFPVDRC
Trigger: ACACCTGTCAACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS TCA 72 bp TCTCACCTTCCCTGCAGGTCCGTCGTTCCAGCTGGTTaGCATTCACTTCTGGTAGCCTCGTCCCACTTCCTT +
Preference number: 6 (lower is better)
Translates to: SHLPCRSVVPAG*HSLLVASSHFL
Trigger: AAGGAAGTGGGACGAGGCTACCAGAAGTGAATGTCAACCAGCTGGAACGACGGACCTGCAGGGAAGGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp TTCTACCCCAGGTGGCCTCCTTTCACGTCTCTGCTCTaGTCCATACACCCTCTTGCTGCTGCTCCCCAAGAT +
Preference number: 6 (lower is better)
Translates to: FYPRWPPFTSLL*SIHPLAAAPQD
Trigger: ATCTTGGGGAGCAGCAGCAAGAGGGTGTATGGATCAGAGCAGAGACGTGAAAGGAGGCCACCTGGGGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp ATACACAGGGCGTCCACGTCAATGATGCGGTTCTCGTaGCCACTCAGGATATGGTTCAGCTCCTGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: IHRASTSMMRFS*PLRIWFSSWLS
Trigger: GCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS GCA 72 bp TCCCCATCCTTGGGATCTGCTTTGTTCTCAGTGGGCTaGTCGACAAACTTCAGCAGTGGGGATCTCGACCTC +
Preference number: 6 (lower is better)
Translates to: SPSLGSALFSVG*STNFSSGDLDL
Trigger: GAGGTCGAGATCCCCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000507096.1
ENST00000635206.2
CDS CCA 72 bp GTCGCACGCCGATTGCTTCGTCTCCGAGCCTTTGTTTaGCAATCGTCATCCTCAAGAGCTTGTTGTCGCCCT +
Preference number: 6 (lower is better)
Translates to: VARRLLRLRAFV*QSSSSRACCRP
Trigger: AGGGCGACAACAAGCTCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS CCA 72 bp GGCCCAGAAGAGGAAAGATCCCATGGACCAACAAGATaGCAGCTGGTGTACTTCCTGGAGACAGGAGTGAGC +
Preference number: 6 (lower is better)
Translates to: GPEEERSHGPTR*QLVYFLETGVS
Trigger: GCTCACTCCTGTCTCCAGGAAGTACACCAGCTGCCATCTTGTTGGTCCATGGGATCTTTCCTCTTCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp CGTTGGAGCCTCTCAAGGGTGGTAACTGTCAGGCAGTaGAAAACCAGCATAGGAGCATACGCTGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RWSLSRVVTVRQ*KTSIGAYAARK
Trigger: CTTCCTGGCAGCGTATGCTCCTATGCTGGTTTTCCACTGCCTGACAGTTACCACCCTTGAGAGGCTCCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp TGTCGCACGCCGATTGCTTCGTCTCCGAGCCTTTGTTaGGCAATCGTCATCCTCAAGAGCTTGTTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: CRTPIASSPSLC*AIVILKSLLSP
Trigger: GGGCGACAACAAGCTCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS CAA 72 bp CTTCACGCTCATGGGCTGCAAAGTGTCGCACGCCGATaGCTTCGTCTCCGAGCCTTTGTTTGGCAATCGTCA +
Preference number: 6 (lower is better)
Translates to: LHAHGLQSVARR*LRLRAFVWQSS
Trigger: TGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS CAA 72 bp CAACGCCTCAGCAGCGGCACAACTTTCATCTTCTTCTaGCTTCTGAGCCTCCCCTTGTTGTCGCCCTGGACT +
Preference number: 6 (lower is better)
Translates to: QRLSSGTTFIFF*LLSLPLLSPWT
Trigger: AGTCCAGGGCGACAACAAGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGTGCCGCTGCTGAGGCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS CAA 90 bp GCACCAAGTCTTCACGCTCATGGGCTGCAAAGTGTCGCACGCCGATaGCTTCGTCTCCGAGCCTTTGTTTGGCAATCGTCATCCTCAAGA +
Preference number: 6 (lower is better)
Translates to: APSLHAHGLQSVARR*LRLRAFVWQSSSSR
Trigger: TCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS TCA 72 bp ATCTCCATCAATCAGCTCTCGGTACTTCTTCTTCAGTaGCTGGTGGCGCTCCCGGAGCTGATTGGCCATGAG +
Preference number: 6 (lower is better)
Translates to: ISINQLSVLLLQ*LVALPELIGHE
Trigger: CTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTACCGAGAGCTGATTGATGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS TCA 72 bp GGTACCTGTTCTCCATACACAGGGCGTCCACGTCAATaGTGCGGTTCTCGTGCCCACTCAGGATATGGTTCA +
Preference number: 6 (lower is better)
Translates to: GTCSPYTGRPRQ*CGSRAHSGYGS
Trigger: TGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATGGAGAACAGGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS TCA 72 bp CCCCCAGCCGCTGCACCCAAGCAATTCCAACATAAGTaGCCTCCCGGAATACATTTAGACAGGGTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: PPAAAPKQFQHK*PPGIHLDRVAV
Trigger: AACAGCCACCCTGTCTAAATGTATTCCGGGAGGTCACTTATGTTGGAATTGCTTGGGTGCAGCGGCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp TTCACGCTCATGGGCTGCAAAGTGTCGCACGCCGATTaGTTCGTCTCCGAGCCTTTGTTTGGCAATCGTCAT +
Preference number: 6 (lower is better)
Translates to: FTLMGCKVSHAD*FVSEPLFGNRH
Trigger: ATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS CCA 72 bp AGGACTCCTGTCAGAGCACTGCTGCTGGATTTACCCTaGCCCTTCGAGTTTTTCCGTCTCTCCAGAGCATTC +
Preference number: 6 (lower is better)
Translates to: RTPVRALLLDLP*PFEFFRLSRAF
Trigger: GAATGCTCTGGAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS CCA 72 bp AGGAACACATTAGTGAATCAATCTGTCAGAGGAGGCTaGGATCCTCTGCAGAGGCATGTCAGGCCGACAGCC +
Preference number: 6 (lower is better)
Translates to: RNTLVNQSVRGG*DPLQRHVRPTA
Trigger: GGCTGTCGGCCTGACATGCCTCTGCAGAGGATCCCAGCCTCCTCTGACAGATTGATTCACTAATGTGTTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp TTTGTTCTCAGTGGGCTGCTCGACAAACTTCAGCAGTaGGGATCTCGACCTCTGTCCACTAGGAAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: FVLSGLLDKLQQ*GSRPLSTRKSG
Trigger: CCCACTCTTCCTAGTGGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000507096.1
ENST00000635206.2
CDS CAA 72 bp TCCCAGCTACAAGGGAGGCTGAGGCACATGAATCACTaGAACCCGGGAGGTGGAGGTTGTAGTGATCCAAGA +
Preference number: 6 (lower is better)
Translates to: SQLQGRLRHMNH*NPGGGGCSDPR
Trigger: TCTTGGATCACTACAACCTCCACCTCCCGGGTTCAAGTGATTCATGTGCCTCAGCCTCCCTTGTAGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp GGGGAAGGTCTGGAGAACGAAATGTGGTGCACAGTGAAATGGCCCTaGAACAACCACCTCGTCCACGAATGCTTTGCCACCCGGTTTGAA +
Preference number: 6 (lower is better)
Translates to: GEGLENEMWCTVKWP*NNHLVHECFATRFE
Trigger: TTCAAACCGGGTGGCAAAGCATTCGTGGACGAGGTGGTTGTTCAAGGGCCATTTCACTGTGCACCACATTTCGTTCTCCAGACCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp CACACACTTAATCGGCACAGGGCTGGCTACCCACAGACACTACCATaGAAGGGAAGCCTGCTACGACTGCTGACATGCTCCATACTTCCT +
Preference number: 6 (lower is better)
Translates to: HTLNRHRAGYPQTLP*KGSLLRLLTCSILP
Trigger: AGGAAGTATGGAGCATGTCAGCAGTCGTAGCAGGCTTCCCTTCAATGGTAGTGTCTGTGGGTAGCCAGCCCTGTGCCGATTAAGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507096.1
CDS TCA 72 bp TACTTCTTCTTCAGTGACTGGTGGCGCTCCCGGAGCTaGTTGGCCATGAGTTTGTACTGGTCCCTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: YFFFSDWWRSRS*LAMSLYWSLSC
Trigger: ACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS GCA 72 bp TCCAGAGACTCAATCTGTTCCTTAGCTCGCTCTAGCTaGTGCACCAAGTCTTCACGCTCATGGGCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: SRDSICSLARSS*CTKSSRSWAAK
Trigger: CTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAAGGAACAGATTGAGTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS GCA 72 bp CCTAGCTTTCCAGGCCCCGCTCAGTTCTCTCACACTTaGATTTTGGTTCCAGGTGTACGTCTGTCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: PSFPGPAQFSHT*ILVPGVRLSCK
Trigger: CTTGCAAGACAGACGTACACCTGGAACCAAAATGCAAGTGTGAGAGAACTGAGCGGGGCCTGGAAAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp AATACTTTCAATCATTTTCCACTTGCCTCTCTCCCATaGCCCTGCGTTCGTCAGGCCCCGGATTCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: NTFNHFPLASLP*PCVRQAPDSLV
Trigger: GACCAGAGAATCCGGGGCCTGACGAACGCAGGGGCATGGGAGAGAGGCAAGTGGAAAATGATTGAAAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp TTTCCAGGCCCCGCTCAGTTCTCTCACACTTGCATTTaGGTTCCAGGTGTACGTCTGTCTTGCAAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: FPGPAQFSHTCI*VPGVRLSCKQD
Trigger: GTCCTGCTTGCAAGACAGACGTACACCTGGAACCAAAATGCAAGTGTGAGAGAACTGAGCGGGGCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp AAGCCTAGCTTTCCAGGCCCCGCTCAGTTCTCTCACACTTGCATTTaGGTTCCAGGTGTACGTCTGTCTTGCAAGCAGGACCAGCTACAT +
Preference number: 6 (lower is better)
Translates to: KPSFPGPAQFSHTCI*VPGVRLSCKQDQLH
Trigger: ATGTAGCTGGTCCTGCTTGCAAGACAGACGTACACCTGGAACCAAAATGCAAGTGTGAGAGAACTGAGCGGGGCCTGGAAAGCTAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp CCAGGTGGCCTCCTTTCACGTCTCTGCTCTGATCCATACACCCTCTaGCTGCTGCTCCCCAAGATGCTGAATTTCCAAGCTCATTTACCA +
Preference number: 6 (lower is better)
Translates to: PGGLLSRLCSDPYTL*LLLPKMLNFQAHLP
Trigger: TGGTAAATGAGCTTGGAAATTCAGCATCTTGGGGAGCAGCAGCAAGAGGGTGTATGGATCAGAGCAGAGACGTGAAAGGAGGCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp CCTGTCAATAAATTACCCGTGTCATCCCTTCGAGATTaGCCTGCTTCCCTTTGCTGCTCTCCGCTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: PVNKLPVSSLRD*PASLCCSPLSS
Trigger: GGAAGAAAGCGGAGAGCAGCAAAGGGAAGCAGGGCAATCTCGAAGGGATGACACGGGTAATTTATTGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp TGGATGCTGTCTTTGGCAGGCAATGGGGACTCAGTCTaGTTTGCAGAGAAGGCTAGTGTCATGCTCAGAACT +
Preference number: 6 (lower is better)
Translates to: WMLSLAGNGDSV*FAEKASVMLRT
Trigger: AGTTCTGAGCATGACACTAGCCTTCTCTGCAAAGCAGACTGAGTCCCCATTGCCTGCCAAAGACAGCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp AAAGTGTCGCACGCCGATTGCTTCGTCTCCGAGCCTTaGTTTGGCAATCGTCATCCTCAAGAGCTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: KVSHADCFVSEP*FGNRHPQELVV
Trigger: GACAACAAGCTCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000512432.1
ENST00000635206.2
CDS TCA 72 bp GTGACCTCCCGGAATACATTTAGACAGGGTGGCTGTTaGGGAAGGAGAGGAGGCCTTCTTCAAAAACATTCC +
Preference number: 6 (lower is better)
Translates to: VTSRNTFRQGGC*GRRGGLLQKHS
Trigger: GGAATGTTTTTGAAGAAGGCCTCCTCTCCTTCCTCAACAGCCACCCTGTCTAAATGTATTCCGGGAGGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp GTGTCATCCCTTCGAGATTGCCCTGCTTCCCTTTGCTaGTCTCCGCTTTCTTCCACATACATCTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: VSSLRDCPASLC*SPLSSTYIFIS
Trigger: AGAGATGAAGATGTATGTGGAAGAAAGCGGAGAGCAGCAAAGGGAAGCAGGGCAATCTCGAAGGGATGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp GAAGGAGAGGAGGCCTTCTTCAAAAACATTCCAGGCTaGGTGGTATTTTTGGGAAGGCAGCAGGGTTTAGGA +
Preference number: 6 (lower is better)
Translates to: EGEEAFFKNIPG*VVFLGRQQGLG
Trigger: TCCTAAACCCTGCTGCCTTCCCAAAAATACCACCCAGCCTGGAATGTTTTTGAAGAAGGCCTCCTCTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp GAAGGTCTGGAGAACGAAATGTGGTGCACAGTGAAATaGCCCTTGAACAACCACCTCGTCCACGAATGCTTT +
Preference number: 6 (lower is better)
Translates to: EGLENEMWCTVK*PLNNHLVHECF
Trigger: AAAGCATTCGTGGACGAGGTGGTTGTTCAAGGGCCATTTCACTGTGCACCACATTTCGTTCTCCAGACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp GGAGAAACCATCAACCAGAAGTTGGAAATGTGGGTCTaGGTCTTGCTCTTGATGGGGTGGTGGGTACAAGAG +
Preference number: 6 (lower is better)
Translates to: GETINQKLEMWV*VLLLMGWWVQE
Trigger: CTCTTGTACCCACCACCCCATCAAGAGCAAGACCAAGACCCACATTTCCAACTTCTGGTTGATGGTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp CTAGGTTTCTTCATCAATTCTTCGAGATGGCTTCCGTaGGAGCCTCTCAAGGGTGGTAACTGTCAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LGFFINSSRWLP*EPLKGGNCQAV
Trigger: CACTGCCTGACAGTTACCACCCTTGAGAGGCTCCAACGGAAGCCATCTCGAAGAATTGATGAAGAAACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp GACAGTGGAAGATCAGACCTAATGTGGGGTCCTTCTGAGCACAGGTaGCATGCCCACAAAGCCAACCCCATGTGTAGTATTTGCTACTTT +
Preference number: 6 (lower is better)
Translates to: DSGRSDLMWGPSEHR*HAHKANPMCSICYF
Trigger: AAAGTAGCAAATACTACACATGGGGTTGGCTTTGTGGGCATGCAACCTGTGCTCAGAAGGACCCCACATTAGGTCTGATCTTCCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp TGGCCACCTACTTGTTGGTTTGCCTCTGGTGCTGAATaGCCATGTTTTTCTCGTGGATTGTTTCCAACAGGG +
Preference number: 6 (lower is better)
Translates to: WPPTCWFASGAE*PCFSRGLFPTG
Trigger: CCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAGTAGGTGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp AGAAGCCCCACTTTCTCAGTGAATGAGGAACTGTGGTaGCCTGCTGAGAATGGACCAGGGTTTAGAAGATGT +
Preference number: 6 (lower is better)
Translates to: RSPTFSVNEELW*PAENGPGFRRC
Trigger: ACATCTTCTAAACCCTGGTCCATTCTCAGCAGGTCACCACAGTTCCTCATTCACTGAGAAAGTGGGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp TGTCAGGCAGTGGAAAACCAGCATAGGAGCATACGCTaGCAGGAAGGAACACCTTTACTGCTATGTATAACG +
Preference number: 6 (lower is better)
Translates to: CQAVENQHRSIR*QEGTPLLLCIT
Trigger: CGTTATACATAGCAGTAAAGGTGTTCCTTCCTGGCAGCGTATGCTCCTATGCTGGTTTTCCACTGCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp ACTACTCAGTGTGTAGCTCAGAGTAAGCATTCAGTATaGCTGGTACCCTTTCCTTGCTTGGCTCCAGCTGAT +
Preference number: 6 (lower is better)
Translates to: TTQCVAQSKHSV*LVPFPCLAPAD
Trigger: ATCAGCTGGAGCCAAGCAAGGAAAGGGTACCAGCCATACTGAATGCTTACTCTGAGCTACACACTGAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp GTAGCTCAGAGTAAGCATTCAGTATGGCTGGTACCCTTTCCTTGCTaGGCTCCAGCTGATAGCCAAGATGCTGATATAAAGCAGAAGCAC +
Preference number: 6 (lower is better)
Translates to: VAQSKHSVWLVPFPC*APADSQDADIKQKH
Trigger: GTGCTTCTGCTTTATATCAGCATCTTGGCTATCAGCTGGAGCCAAGCAAGGAAAGGGTACCAGCCATACTGAATGCTTACTCTGAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp TGTAAAGTCCTAGGTTTCTTCATCAATTCTTCGAGATGGCTTCCGTaGGAGCCTCTCAAGGGTGGTAACTGTCAGGCAGTGGAAAACCAG +
Preference number: 6 (lower is better)
Translates to: CKVLGFFINSSRWLP*EPLKGGNCQAVENQ
Trigger: CTGGTTTTCCACTGCCTGACAGTTACCACCCTTGAGAGGCTCCAACGGAAGCCATCTCGAAGAATTGATGAAGAAACCTAGGACTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp GCTTCTGAGCCTCCCCTTGTTGTCGCCCTGGACTTCTCCAAGCCTTaGCTGAAGTTCTTTAATTTCTTCTCCCAGATGTTTATTTCGGTC +
Preference number: 6 (lower is better)
Translates to: ASEPPLVVALDFSKP*LKFFNFFSQMFISV
Trigger: GACCGAAATAAACATCTGGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGGGGAGGCTCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS TCA 72 bp CAACCACCTCGTCCACGAATGCTTTGCCACCCGGTTTaGAAGATAAATGAACCTCATATCCGTTCTTTCTCG +
Preference number: 6 (lower is better)
Translates to: QPPRPRMLCHPV*KINEPHIRSFS
Trigger: CGAGAAAGAACGGATATGAGGTTCATTTATCTTTCAAACCGGGTGGCAAAGCATTCGTGGACGAGGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS GCA 72 bp CAGAGTAAGCATTCAGTATGGCTGGTACCCTTTCCTTaGTTGGCTCCAGCTGATAGCCAAGATGCTGATATA +
Preference number: 6 (lower is better)
Translates to: QSKHSVWLVPFP*LAPADSQDADI
Trigger: TATATCAGCATCTTGGCTATCAGCTGGAGCCAAGCAAGGAAAGGGTACCAGCCATACTGAATGCTTACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp ATATCTGGAGAAACCATCAACCAGAAGTTGGAAATGTaGGTCTTGGTCTTGCTCTTGATGGGGTGGTGGGTA +
Preference number: 6 (lower is better)
Translates to: ISGETINQKLEM*VLVLLLMGWWV
Trigger: TACCCACCACCCCATCAAGAGCAAGACCAAGACCCACATTTCCAACTTCTGGTTGATGGTTTCTCCAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp CCTCCCCTTGTTGTCGCCCTGGACTTCTCCAAGCCTTaGCTGAAGTTCTTTAATTTCTTCTCCCAGATGTTT +
Preference number: 6 (lower is better)
Translates to: PPLVVALDFSKP*LKFFNFFSQMF
Trigger: AAACATCTGGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502801.1
CDS CAA 90 bp ATAAAGCAGAAGCACCATTCTAGTTTAATAAGTTTCCTTCTTGATTaGAGGGGTCTCACCTTCCCTGCAGGTCCGTCGTTCCAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: IKQKHHSSLISFLLD*RGLTFPAGPSFQLV
Trigger: AACCAGCTGGAACGACGGACCTGCAGGGAAGGTGAGACCCCTCAAATCAAGAAGGAAACTTATTAAACTAGAATGGTGCTTCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp AGTTTGGCCACCTACTTGTTGGTTTGCCTCTGGTGCTaGATGACCATGTTTTTCTCGTGGATTGTTTCCAAC +
Preference number: 6 (lower is better)
Translates to: SLATYLLVCLWC*MTMFFSWIVSN
Trigger: GTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAGTAGGTGGCCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp TCCACGAATGCTTTGCCACCCGGTTTGAAAGATAAATaGACCTCATATCCGTTCTTTCTCGATCACCAGGCA +
Preference number: 6 (lower is better)
Translates to: STNALPPGLKDK*TSYPFFLDHQA
Trigger: TGCCTGGTGATCGAGAAAGAACGGATATGAGGTTCATTTATCTTTCAAACCGGGTGGCAAAGCATTCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp TCCCTAGGATTTTGTTGGTTTGCCTCTGGTGCTGAATaGCCATGTTTTTCTCGTGGATTGTTTCCAACAGGG +
Preference number: 6 (lower is better)
Translates to: SLGFCWFASGAE*PCFSRGLFPTG
Trigger: CCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS GCA 72 bp ATCCGTTCTTTCTCGATCACCAGGCAACTGCCAACTTaGTGGCAAGAAGTAGCTCAAGCAAATTGCCTATTA +
Preference number: 6 (lower is better)
Translates to: IRSFSITRQLPT*WQEVAQANCLL
Trigger: TAATAGGCAATTTGCTTGAGCTACTTCTTGCCAGCAAGTTGGCAGTTGCCTGGTGATCGAGAAAGAACGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp CTGCTCTCCGCTTTCTTCCACATACATCTTCATCTCTaGTGCAATCTTCCCTTCACTCCAGCTTCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: LLSAFFHIHLHL*CNLPFTPASLF
Trigger: AAAAAGAGAAGCTGGAGTGAAGGGAAGATTGCACCAGAGATGAAGATGTATGTGGAAGAAAGCGGAGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp TGTAAAGTCCTAGGTTTCTTCATCAATTCTTCGAGATaGCTTCCGTTGGAGCCTCTCAAGGGTGGTAACTGT +
Preference number: 6 (lower is better)
Translates to: CKVLGFFINSSR*LPLEPLKGGNC
Trigger: ACAGTTACCACCCTTGAGAGGCTCCAACGGAAGCCATCTCGAAGAATTGATGAAGAAACCTAGGACTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 72 bp AGTAAGCATTCAGTATGGCTGGTACCCTTTCCTTGCTaGGCTCCAGCTGATAGCCAAGATGCTGATATAAAG +
Preference number: 6 (lower is better)
Translates to: SKHSVWLVPFPC*APADSQDADIK
Trigger: CTTTATATCAGCATCTTGGCTATCAGCTGGAGCCAAGCAAGGAAAGGGTACCAGCCATACTGAATGCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp CGATTCCCTAGGATTTTGTTGGTTTGCCTCTGGTGCTaGATGACCATGTTTTTCTCGTGGATTGTTTCCAAC +
Preference number: 6 (lower is better)
Translates to: RFPRILLVCLWC*MTMFFSWIVSN
Trigger: GTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGAATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2
CDS TCA 72 bp CACATTATGAAATACAATCAGAAATGGAGGAGTGGATaGATGCAGGGCTTCATTGGGCTTGTGGATGCTGGT +
Preference number: 6 (lower is better)
Translates to: HIMKYNQKWRSG*MQGFIGLVDAG
Trigger: ACCAGCATCCACAAGCCCAATGAAGCCCTGCATTCATCCACTCCTCCATTTCTGATTGTATTTCATAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512432.1
CDS GCA 72 bp CTCTCCGCTTTCTTCCACATACATCTTCATCTCTGGTaGAATCTTCCCTTCACTCCAGCTTCTCTTTTTCTA +
Preference number: 6 (lower is better)
Translates to: LSAFFHIHLHLW*NLPFTPASLFL
Trigger: TAGAAAAAGAGAAGCTGGAGTGAAGGGAAGATTGCACCAGAGATGAAGATGTATGTGGAAGAAAGCGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp CGTTCTTTCTCGATCACCAGGCAACTGCCAACTTGCTaGCAAGAAGTAGCTCAAGCAAATTGCCTATTAATT +
Preference number: 6 (lower is better)
Translates to: RSFSITRQLPTC*QEVAQANCLLI
Trigger: AATTAATAGGCAATTTGCTTGAGCTACTTCTTGCCAGCAAGTTGGCAGTTGCCTGGTGATCGAGAAAGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CAA 90 bp CTCAATGTGAAGAAATTAAAGAAGGAAGAGACTCAAAGGTGGAGTTaGGGGATACTGGTGACCTGCAAAGAAAGAATACCGTGGGAAATG +
Preference number: 6 (lower is better)
Translates to: LNVKKLKKEETQRWS*GILVTCKERIPWEM
Trigger: CATTTCCCACGGTATTCTTTCTTTGCAGGTCACCAGTATCCCCAAACTCCACCTTTGAGTCTCTTCCTTCTTTAATTTCTTCACATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS CCA 72 bp AAGAAAGAATACCGTGGGAAATGTAGGAAGAGGTCTTaGGAGGCATTAAAGCCAAGGTTATCTTTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: KKEYRGKCRKRS*EALKPRLSFFP
Trigger: AGGAAAGAAAGATAACCTTGGCTTTAATGCCTCCCAAGACCTCTTCCTACATTTCCCACGGTATTCTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp ACTGTCTATGCATCCTTTGGAAGGATATATAAGAAATaGGGAATGGACGTTTCTTCCAGGAAGGGGATTAAG +
Preference number: 6 (lower is better)
Translates to: TVYASFGRIYKK*GMDVSSRKGIK
Trigger: CTTAATCCCCTTCCTGGAAGAAACGTCCATTCCTCATTTCTTATATATCCTTCCAAAGGATGCATAGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324309.8
CDS TCA 72 bp AAGCTAAATGATGACTCCACCGCTGCCCAAATCATTTaGTGGAATTTCTATTTGAGAAATGCTCACTGCAAA +
Preference number: 6 (lower is better)
Translates to: KLNDDSTAAQII*WNFYLRNAHCK
Trigger: TTTGCAGTGAGCATTTCTCAAATAGAAATTCCATCAAATGATTTGGGCAGCGGTGGAGTCATCATTTAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508236.1
CDS TCA 72 bp TCTTTAATTTCTTCTCCCAGATGTTTATTTCGGTCCTaGGAATCTCTCAATAGTTGTGCAAGATTAGCCTGT +
Preference number: 6 (lower is better)
Translates to: SLISSPRCLFRS*ESLNSCARLAC
Trigger: ACAGGCTAATCTTGCACAACTATTGAGAGATTCTCAGGACCGAAATAAACATCTGGGAGAAGAAATTAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000502801.1
ENST00000504487.5
ENST00000635206.2
CDS TCA 72 bp CATTCTTGTATTTGGCAATGTTTGATTTCAAGAGGTTaGCCTCTTCATGGAGTTGCTTTAATCTCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: HSCIWQCLISRG*PLHGVALISLE
Trigger: TTCAAGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324309.8
ENST00000389609.8
ENST00000504487.5
ENST00000635206.2