Pregenerated sensors for CCDC140 (Homo sapiens)
Ensembl gene IDs: ENSG00000163081Ensembl transcript IDs: ENST00000440903.1, ENST00000647762.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGATGGTGCGCGCGCAGGGCCACCGTGGGGAGCCGGGCAGCTTTCTaGAAGAGGGCTCTTGGAGGTTGGCGGGTTAGCGAGGGGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GWCARRATVGSRAAF*KRALGGWRVSEGSA Trigger: TGCAGACCCCTCGCTAACCCGCCAACCTCCAAGAGCCCTCTTGCAGAAAGCTGCCCGGCTCCCCACGGTGGCCCTGCGCGCGCACCATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | GCGAAGAAGCGAGACCGCGAGGATGGTGCGCGCGCAGGGCCACCGTaGGGAGCCGGGCAGCTTTCTGCAAGAGGGCTCTTGGAGGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: AKKRDREDGARAGPP*GAGQLSARGLLEVG Trigger: GCCAACCTCCAAGAGCCCTCTTGCAGAAAGCTGCCCGGCTCCCCACGGTGGCCCTGCGCGCGCACCATCCTCGCGGTCTCGCTTCTTCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | GCGCGCTGCTCTCTGCAAATCCTGGCGGAGCTGGGCGGTCAGGCCTaGGGCGAGCCGGGGAGACTTGTCCCTGTTGTTTTGGAAATGCCG | + |
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Preference number: 5 (lower is better) Translates to: ARCSLQILAELGGQA*GEPGRLVPVVLEMP Trigger: CGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCTGACCGCCCAGCTCCGCCAGGATTTGCAGAGAGCAGCGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | AGTACGTGTCCTAGGGCGGGCAGCCCTCCCGGGGTCTGTGGACTGTaGGCTCTCAGGAGACGCCCGGGTGGAGTTGGATATCTCCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: STCPRAGSPPGVCGL*ALRRRPGGVGYLRE Trigger: CTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGAGCGCACAGTCCACAGACCCCGGGAGGGCTGCCCGCCCTAGGACACGTACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | TCCCAGGTCCGCGCTCCCCAAGAACTGGCCAGATCGCGCCGGGCTTaGCCCCTGACAACTCTGCCTCCTCCACCTGTTGCGTTTACTCCG | + |
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Preference number: 5 (lower is better) Translates to: SQVRAPQELARSRRA*PLTTLPPPPVAFTP Trigger: CGGAGTAAACGCAACAGGTGGAGGAGGCAGAGTTGTCAGGGGCCAAGCCCGGCGCGATCTGGCCAGTTCTTGGGGAGCGCGGACCTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | CCCTCCCGGGGTCTGTGGACTGTGCGCTCTCAGGAGACGCCCGGGTaGAGTTGGATATCTCCGAGAGGCAGGTGCGCGCAGCACTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PSRGLWTVRSQETPG*SWISPRGRCAQHSS Trigger: TGAAGAGTGCTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGAGCGCACAGTCCACAGACCCCGGGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | ACCGTGGGGAGCCGGGCAGCTTTCTGCAAGAGGGCTCTTGGAGGTTaGCGGGTTAGCGAGGGGTCTGCACTTCTGCCGCATGCTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TVGSRAAFCKRALGG*RVSEGSALLPHAPS Trigger: GGAGGGAGCATGCGGCAGAAGTGCAGACCCCTCGCTAACCCGCCAACCTCCAAGAGCCCTCTTGCAGAAAGCTGCCCGGCTCCCCACGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | ATCTCCGAGAGGCAGGTGCGCGCAGCACTCTTCAAAACGCCTCTCTaGAGTCCCAGGTCCGCGCTCCCCAAGAACTGGCCAGATCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: ISERQVRAALFKTPL*SPRSALPKNWPDRA Trigger: GGCGCGATCTGGCCAGTTCTTGGGGAGCGCGGACCTGGGACTGCAGAGAGGCGTTTTGAAGAGTGCTGCGCGCACCTGCCTCTCGGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | GCGGTCAGGCCTGCGGCGAGCCGGGGAGACTTGTCCCTGTTGTTTTaGAAATGCCGCGGTGGAGAAGGAGGTGAACCGGCTTCTGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: AVRPAASRGDLSLLF*KCRGGEGGEPASER Trigger: CCGCTCAGAAGCCGGTTCACCTCCTTCTCCACCGCGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCTGACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | TTTCTGCAAATGGAGCGCGCTGCTCTCTGCAAATCCTGGCGGAGCTaGGCGGTCAGGCCTGCGGCGAGCCGGGGAGACTTGTCCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: FLQMERAALCKSWRS*AVRPAASRGDLSLL Trigger: CAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCTGACCGCCCAGCTCCGCCAGGATTTGCAGAGAGCAGCGCGCTCCATTTGCAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | AGTCCAGTCTCGATTTCCTTTCTGCAAATGGAGCGCGCTGCTCTCTaGAAATCCTGGCGGAGCTGGGCGGTCAGGCCTGCGGCGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SPVSISFLQMERAAL*KSWRSWAVRPAASR Trigger: CCGGCTCGCCGCAGGCCTGACCGCCCAGCTCCGCCAGGATTTGCAGAGAGCAGCGCGCTCCATTTGCAGAAAGGAAATCGAGACTGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | AGAGGGCTCTTGGAGGTTGGCGGGTTAGCGAGGGGTCTGCACTTCTaGCGCATGCTCCCTCCAGCTAATCAACGGGTCTCGGTGGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: RGLLEVGGLARGLHF*RMLPPANQRVSVAP Trigger: AGGGGCCACCGAGACCCGTTGATTAGCTGGAGGGAGCATGCGGCAGAAGTGCAGACCCCTCGCTAACCCGCCAACCTCCAAGAGCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | TCGATTTCCTTTCTGCAAATGGAGCGCGCTGCTCTCTGCAAATCCTaGCGGAGCTGGGCGGTCAGGCCTGCGGCGAGCCGGGGAGACTTG | + |
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Preference number: 5 (lower is better) Translates to: SISFLQMERAALCKS*RSWAVRPAASRGDL Trigger: CAAGTCTCCCCGGCTCGCCGCAGGCCTGACCGCCCAGCTCCGCCAGGATTTGCAGAGAGCAGCGCGCTCCATTTGCAGAAAGGAAATCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | CGGGGTCTGTGGACTGTGCGCTCTCAGGAGACGCCCGGGTGGAGTTaGATATCTCCGAGAGGCAGGTGCGCGCAGCACTCTTCAAAACGC | + |
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Preference number: 5 (lower is better) Translates to: RGLWTVRSQETPGWS*ISPRGRCAQHSSKR Trigger: GCGTTTTGAAGAGTGCTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGAGCGCACAGTCCACAGACCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | AGGCCTGCGGCGAGCCGGGGAGACTTGTCCCTGTTGTTTTGGAAATaGCGCGGTGGAGAAGGAGGTGAACCGGCTTCTGAGCGGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RPAASRGDLSLLFWK*RGGEGGEPASERQK Trigger: CTTCTGCCGCTCAGAAGCCGGTTCACCTCCTTCTCCACCGCGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | TCTCAGGAGACGCCCGGGTGGAGTTGGATATCTCCGAGAGGCAGGTaGGCGCAGCACTCTTCAAAACGCCTCTCTGCAGTCCCAGGTCCG | + |
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Preference number: 5 (lower is better) Translates to: SQETPGWSWISPRGR*AQHSSKRLSAVPGP Trigger: CGGACCTGGGACTGCAGAGAGGCGTTTTGAAGAGTGCTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS TCA 90 bp | TCCGCGCTCCCCAAGAACTGGCCAGATCGCGCCGGGCTTGGCCCCTaGCAACTCTGCCTCCTCCACCTGTTGCGTTTACTCCGTTTAGTT | + |
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Preference number: 5 (lower is better) Translates to: SALPKNWPDRAGLGP*QLCLLHLLRLLRLV Trigger: AACTAAACGGAGTAAACGCAACAGGTGGAGGAGGCAGAGTTGTCAGGGGCCAAGCCCGGCGCGATCTGGCCAGTTCTTGGGGAGCGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | CAGAAGGAGTCCAGTCTCGATTTCCTTTCTGCAAATGGAGCGCGCTaGTCTCTGCAAATCCTGGCGGAGCTGGGCGGTCAGGCCTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: QKESSLDFLSANGAR*SLQILAELGGQACG Trigger: GCCGCAGGCCTGACCGCCCAGCTCCGCCAGGATTTGCAGAGAGCAGCGCGCTCCATTTGCAGAAAGGAAATCGAGACTGGACTCCTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 90 bp | GAAGCGGCTGAGGCTCACTGCGCTGGTTCAGGAGCTGGGGCCGCGTaGAGTCAGAAGGAGTCCAGTCTCGATTTCCTTTCTGCAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: EAAEAHCAGSGAGAA*SQKESSLDFLSANG Trigger: TCCATTTGCAGAAAGGAAATCGAGACTGGACTCCTTCTGACTCCACGCGGCCCCAGCTCCTGAACCAGCGCAGTGAGCCTCAGCCGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS TCA 90 bp | TCCATCTCGAGGAGAAATTTTCTGAGACCCAGTTTGAGAAGCGGCTaGGGCTCACTGCGCTGGTTCAGGAGCTGGGGCCGCGTGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SISRRNFLRPSLRSG*GSLRWFRSWGRVES Trigger: TGACTCCACGCGGCCCCAGCTCCTGAACCAGCGCAGTGAGCCTCAGCCGCTTCTCAAACTGGGTCTCAGAAAATTTCTCCTCGAGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440903.1 ENST00000647762.1 |
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| CDS CCA 90 bp | TGCACTTCTGCCGCATGCTCCCTCCAGCTAATCAACGGGTCTCGGTaGCCCCTTTCGATGGGTTTCTGTGTCGGAGATGGTCAGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: CTSAACSLQLINGSR*PLSMGFCVGDGQFS Trigger: TGAAAACTGACCATCTCCGACACAGAAACCCATCGAAAGGGGCCACCGAGACCCGTTGATTAGCTGGAGGGAGCATGCGGCAGAAGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 90 bp | AGGAGATCTGGGTTTGAACATTCATCTCCCATGTTACTCTTTTCTTaGTCCTCGCGTCACTGGCCCCTCTTTCCTGCCGCTGAAATCCAT | + |
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Preference number: 5 (lower is better) Translates to: RRSGFEHSSPMLLFS*SSRHWPLFPAAEIH Trigger: ATGGATTTCAGCGGCAGGAAAGAGGGGCCAGTGACGCGAGGAGCAAGAAAAGAGTAACATGGGAGATGAATGTTCAAACCCAGATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440903.1 ENST00000647762.1 |
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| CDS CCA 90 bp | GAACATTCATCTCCCATGTTACTCTTTTCTTGCTCCTCGCGTCACTaGCCCCTCTTTCCTGCCGCTGAAATCCATCTCGAGGAGAAATTT | + |
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Preference number: 5 (lower is better) Translates to: EHSSPMLLFSCSSRH*PLFPAAEIHLEEKF Trigger: AAATTTCTCCTCGAGATGGATTTCAGCGGCAGGAAAGAGGGGCCAGTGACGCGAGGAGCAAGAAAAGAGTAACATGGGAGATGAATGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440903.1 ENST00000647762.1 |
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| CDS CCA 72 bp | CGAGACCGCGAGGATGGTGCGCGCGCAGGGCCACCGTaGGGAGCCGGGCAGCTTTCTGCAAGAGGGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RDREDGARAGPP*GAGQLSARGLL Trigger: CAAGAGCCCTCTTGCAGAAAGCTGCCCGGCTCCCCACGGTGGCCCTGCGCGCGCACCATCCTCGCGGTCTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 72 bp | GCGCGCAGGGCCACCGTGGGGAGCCGGGCAGCTTTCTaGAAGAGGGCTCTTGGAGGTTGGCGGGTTAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: ARRATVGSRAAF*KRALGGWRVSE Trigger: CTCGCTAACCCGCCAACCTCCAAGAGCCCTCTTGCAGAAAGCTGCCCGGCTCCCCACGGTGGCCCTGCGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | CGCGCTCCCCAAGAACTGGCCAGATCGCGCCGGGCTTaGCCCCTGACAACTCTGCCTCCTCCACCTGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: RAPQELARSRRA*PLTTLPPPPVA Trigger: CGCAACAGGTGGAGGAGGCAGAGTTGTCAGGGGCCAAGCCCGGCGCGATCTGGCCAGTTCTTGGGGAGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 90 bp | GCAGGGCCACCGTGGGGAGCCGGGCAGCTTTCTGCAAGAGGGCTCTaGGAGGTTGGCGGGTTAGCGAGGGGTCTGCACTTCTGCCGCATG | + |
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Preference number: 6 (lower is better) Translates to: AGPPWGAGQLSARGL*EVGGLARGLHFCRM Trigger: CATGCGGCAGAAGTGCAGACCCCTCGCTAACCCGCCAACCTCCAAGAGCCCTCTTGCAGAAAGCTGCCCGGCTCCCCACGGTGGCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | TTTCTGCAAATGGAGCGCGCTGCTCTCTGCAAATCCTaGCGGAGCTGGGCGGTCAGGCCTGCGGCGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: FLQMERAALCKS*RSWAVRPAASR Trigger: CCGGCTCGCCGCAGGCCTGACCGCCCAGCTCCGCCAGGATTTGCAGAGAGCAGCGCGCTCCATTTGCAGAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | GGTCTGTGGACTGTGCGCTCTCAGGAGACGCCCGGGTaGAGTTGGATATCTCCGAGAGGCAGGTGCGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: GLWTVRSQETPG*SWISPRGRCAQ Trigger: CTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGAGCGCACAGTCCACAGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 72 bp | GTGGACTGTGCGCTCTCAGGAGACGCCCGGGTGGAGTaGGATATCTCCGAGAGGCAGGTGCGCGCAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: VDCALSGDARVE*DISERQVRAAL Trigger: GAGTGCTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGAGCGCACAGTCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 72 bp | CCGTGGGGAGCCGGGCAGCTTTCTGCAAGAGGGCTCTaGGAGGTTGGCGGGTTAGCGAGGGGTCTGCACTTC | + |
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Preference number: 6 (lower is better) Translates to: PWGAGQLSARGL*EVGGLARGLHF Trigger: GAAGTGCAGACCCCTCGCTAACCCGCCAACCTCCAAGAGCCCTCTTGCAGAAAGCTGCCCGGCTCCCCACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 90 bp | TCCTGGCGGAGCTGGGCGGTCAGGCCTGCGGCGAGCCGGGGAGACTaGTCCCTGTTGTTTTGGAAATGCCGCGGTGGAGAAGGAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SWRSWAVRPAASRGD*SLLFWKCRGGEGGE Trigger: TTCACCTCCTTCTCCACCGCGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCTGACCGCCCAGCTCCGCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 72 bp | AGGCAGGTGCGCGCAGCACTCTTCAAAACGCCTCTCTaGAGTCCCAGGTCCGCGCTCCCCAAGAACTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RQVRAALFKTPL*SPRSALPKNWP Trigger: TGGCCAGTTCTTGGGGAGCGCGGACCTGGGACTGCAGAGAGGCGTTTTGAAGAGTGCTGCGCGCACCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | TGGACTGTGCGCTCTCAGGAGACGCCCGGGTGGAGTTaGATATCTCCGAGAGGCAGGTGCGCGCAGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: WTVRSQETPGWS*ISPRGRCAQHS Trigger: AGAGTGCTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGAGCGCACAGTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 72 bp | AGCTGGGCGGTCAGGCCTGCGGCGAGCCGGGGAGACTaGTCCCTGTTGTTTTGGAAATGCCGCGGTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SWAVRPAASRGD*SLLFWKCRGGE Trigger: TTCTCCACCGCGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCTGACCGCCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 90 bp | AGCTGGGCGGTCAGGCCTGCGGCGAGCCGGGGAGACTTGTCCCTGTaGTTTTGGAAATGCCGCGGTGGAGAAGGAGGTGAACCGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SWAVRPAASRGDLSL*FWKCRGGEGGEPAS Trigger: AGAAGCCGGTTCACCTCCTTCTCCACCGCGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCTGACCGCCCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 90 bp | CCGGGGTCTGTGGACTGTGCGCTCTCAGGAGACGCCCGGGTGGAGTaGGATATCTCCGAGAGGCAGGTGCGCGCAGCACTCTTCAAAACG | + |
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Preference number: 6 (lower is better) Translates to: PGSVDCALSGDARVE*DISERQVRAALFKT Trigger: CGTTTTGAAGAGTGCTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGTCTCCTGAGAGCGCACAGTCCACAGACCCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS TCA 72 bp | TTGGACTCATTCGCAGCCTCTTGCCTCTGGTTCCCGTaGTCCCACGGTGGCGAGCTTCCAGGCTCAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: LDSFAASCLWFP*SHGGELPGSAR Trigger: CCTCGCTGAGCCTGGAAGCTCGCCACCGTGGGATCACGGGAACCAGAGGCAAGAGGCTGCGAATGAGTCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS TCA 72 bp | CCCAAGAACTGGCCAGATCGCGCCGGGCTTGGCCCCTaGCAACTCTGCCTCCTCCACCTGTTGCGTTTACTC | + |
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Preference number: 6 (lower is better) Translates to: PKNWPDRAGLGP*QLCLLHLLRLL Trigger: GAGTAAACGCAACAGGTGGAGGAGGCAGAGTTGTCAGGGGCCAAGCCCGGCGCGATCTGGCCAGTTCTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | AGCCGGGCAGCTTTCTGCAAGAGGGCTCTTGGAGGTTaGCGGGTTAGCGAGGGGTCTGCACTTCTGCCGCAT | + |
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Preference number: 6 (lower is better) Translates to: SRAAFCKRALGG*RVSEGSALLPH Trigger: ATGCGGCAGAAGTGCAGACCCCTCGCTAACCCGCCAACCTCCAAGAGCCCTCTTGCAGAAAGCTGCCCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 72 bp | ACGCCCGGGTGGAGTTGGATATCTCCGAGAGGCAGGTaGGCGCAGCACTCTTCAAAACGCCTCTCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: TPGWSWISPRGR*AQHSSKRLSAV Trigger: GACTGCAGAGAGGCGTTTTGAAGAGTGCTGCGCGCACCTGCCTCTCGGAGATATCCAACTCCACCCGGGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 72 bp | TTGGAGGTTGGCGGGTTAGCGAGGGGTCTGCACTTCTaGCGCATGCTCCCTCCAGCTAATCAACGGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LEVGGLARGLHF*RMLPPANQRVS Trigger: CGAGACCCGTTGATTAGCTGGAGGGAGCATGCGGCAGAAGTGCAGACCCCTCGCTAACCCGCCAACCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 72 bp | GTCAGGCCTGCGGCGAGCCGGGGAGACTTGTCCCTGTaGTTTTGGAAATGCCGCGGTGGAGAAGGAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: VRPAASRGDLSL*FWKCRGGEGGE Trigger: TTCACCTCCTTCTCCACCGCGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGCCGCAGGCCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS GCA 72 bp | GCGAGCCGGGGAGACTTGTCCCTGTTGTTTTGGAAATaGCGCGGTGGAGAAGGAGGTGAACCGGCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ASRGDLSLLFWK*RGGEGGEPASE Trigger: CTCAGAAGCCGGTTCACCTCCTTCTCCACCGCGGCATTTCCAAAACAACAGGGACAAGTCTCCCCGGCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | GAGGCTCACTGCGCTGGTTCAGGAGCTGGGGCCGCGTaGAGTCAGAAGGAGTCCAGTCTCGATTTCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: EAHCAGSGAGAA*SQKESSLDFLS Trigger: AGAAAGGAAATCGAGACTGGACTCCTTCTGACTCCACGCGGCCCCAGCTCCTGAACCAGCGCAGTGAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | GCCGCATGCTCCCTCCAGCTAATCAACGGGTCTCGGTaGCCCCTTTCGATGGGTTTCTGTGTCGGAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: AACSLQLINGSR*PLSMGFCVGDG Trigger: ACCATCTCCGACACAGAAACCCATCGAAAGGGGCCACCGAGACCCGTTGATTAGCTGGAGGGAGCATGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS TCA 72 bp | AGGAGAAATTTTCTGAGACCCAGTTTGAGAAGCGGCTaGGGCTCACTGCGCTGGTTCAGGAGCTGGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RRNFLRPSLRSG*GSLRWFRSWGR Trigger: GCGGCCCCAGCTCCTGAACCAGCGCAGTGAGCCTCAGCCGCTTCTCAAACTGGGTCTCAGAAAATTTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440903.1 ENST00000647762.1 |
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| CDS GCA 72 bp | TCCAGTCTCGATTTCCTTTCTGCAAATGGAGCGCGCTaGTCTCTGCAAATCCTGGCGGAGCTGGGCGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSLDFLSANGAR*SLQILAELGGQ Trigger: CTGACCGCCCAGCTCCGCCAGGATTTGCAGAGAGCAGCGCGCTCCATTTGCAGAAAGGAAATCGAGACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 72 bp | CCCAGGTGTGCTTTTAAAACTCGAGGAACGCGGGTGTaGGACTCATTCGCAGCCTCTTGCCTCTGGTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: PRCAFKTRGTRV*DSFAASCLWFP Trigger: CGGGAACCAGAGGCAAGAGGCTGCGAATGAGTCCAACACCCGCGTTCCTCGAGTTTTAAAAGCACACCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | CCAGGTGTGCTTTTAAAACTCGAGGAACGCGGGTGTTaGACTCATTCGCAGCCTCTTGCCTCTGGTTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: PGVLLKLEERGC*THSQPLASGSR Trigger: ACGGGAACCAGAGGCAAGAGGCTGCGAATGAGTCCAACACCCGCGTTCCTCGAGTTTTAAAAGCACACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CCA 72 bp | TCTCCCATGTTACTCTTTTCTTGCTCCTCGCGTCACTaGCCCCTCTTTCCTGCCGCTGAAATCCATCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SPMLLFSCSSRH*PLFPAAEIHLE Trigger: CTCGAGATGGATTTCAGCGGCAGGAAAGAGGGGCCAGTGACGCGAGGAGCAAGAAAAGAGTAACATGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440903.1 ENST00000647762.1 |
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| CDS GCA 72 bp | GGGTTTGAACATTCATCTCCCATGTTACTCTTTTCTTaGTCCTCGCGTCACTGGCCCCTCTTTCCTGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GFEHSSPMLLFS*SSRHWPLFPAA Trigger: AGCGGCAGGAAAGAGGGGCCAGTGACGCGAGGAGCAAGAAAAGAGTAACATGGGAGATGAATGTTCAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440903.1 ENST00000647762.1 |
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| CDS CAA 90 bp | GGAGGTGAACCGGCTTCTGAGCGGCAGAAGCAACTTCTCCGCAATTaGTCCATTCGAAATTGTCTCGAAGTTGTCTCGAAATTGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GGEPASERQKQLLRN*SIRNCLEVVSKLSR Trigger: CCGGGACAATTTCGAGACAACTTCGAGACAATTTCGAATGGACAAATTGCGGAGAAGTTGCTTCTGCCGCTCAGAAGCCGGTTCACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 72 bp | GCAGAAGCAACTTCTCCGCAATTTGTCCATTCGAAATaGTCTCGAAGTTGTCTCGAAATTGTCCCGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: AEATSPQFVHSK*SRSCLEIVPAA Trigger: CGCAGCCGGGACAATTTCGAGACAACTTCGAGACAATTTCGAATGGACAAATTGCGGAGAAGTTGCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS CAA 72 bp | CCGGCTTCTGAGCGGCAGAAGCAACTTCTCCGCAATTaGTCCATTCGAAATTGTCTCGAAGTTGTCTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: PASERQKQLLRN*SIRNCLEVVSK Trigger: TTTCGAGACAACTTCGAGACAATTTCGAATGGACAAATTGCGGAGAAGTTGCTTCTGCCGCTCAGAAGCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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| CDS TCA 72 bp | TGTAGATATCGATCTTTATCCTTTAAACTGATACGCTaGGAATCAATTAGCCATGCAGATTACATTTCCTAC | + |
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Preference number: 6 (lower is better) Translates to: CRYRSLSFKLIR*ESISHADYISY Trigger: GTAGGAAATGTAATCTGCATGGCTAATTGATTCTCAGCGTATCAGTTTAAAGGATAAAGATCGATATCTACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647762.1 |
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