RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC134 (Homo sapiens)

Ensembl gene IDs: ENSG00000100147

Ensembl transcript IDs: ENST00000255784.6, ENST00000402061.7

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCCCTGCCCTGTGGCCTCCCGAGACGGGAAGCTGTCTGACCCATaGAGCTTAGGGCAGCCATTGCGGAGCACGGCCTCCTGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: LPCPVASRDGKLSDP*SLGQPLRSTASCRA
Trigger: AGCCCTGCAGGAGGCCGTGCTCCGCAATGGCTGCCCTAAGCTGCATGGGTCAGACAGCTTCCCGTCTCGGGAGGCCACAGGGCAGGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp GGCATGAGTGAAGGGCAGCTGCCCTACCCAGGGCCACATGCCCTCTaGAGCTTCCCTGCCCTGTGGCCTCCCGAGACGGGAAGCTGTCTG +
Preference number: 1 (lower is better)
Translates to: GMSEGQLPYPGPHAL*SFPALWPPETGSCL
Trigger: CAGACAGCTTCCCGTCTCGGGAGGCCACAGGGCAGGGAAGCTGCAGAGGGCATGTGGCCCTGGGTAGGGCAGCTGCCCTTCACTCATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp GACAGCCCAGGCTGGTCCCAAGTTGCCCAGGTCTTGCCACCACACTaGGCTGGCTTCCCCATTGCTCTGCAGTTGCCCAGCTCTGCTTCA +
Preference number: 1 (lower is better)
Translates to: DSPGWSQVAQVLPPH*AGFPIALQLPSSAS
Trigger: TGAAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCTGGGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp GACTTGGCATTAGAGCCACCCCTTCACTGCTGCCCCTGGTACCTGTaGCCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAG +
Preference number: 1 (lower is better)
Translates to: DLALEPPLHCCPWYL*PLPPPARLPQWYMQ
Trigger: CTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGGTCACAGGTACCAGGGGCAGCAGTGAAGGGGTGGCTCTAATGCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp GAACCTCCAGCCGAAGCTGGACCCACCACTGACTGTCCTGAGGTATaGTTTAGCCTCCCTGCCACCCCAAGAAAGCTAGGTCTGCTGCCA +
Preference number: 1 (lower is better)
Translates to: EPPAEAGPTTDCPEV*FSLPATPRKLGLLP
Trigger: TGGCAGCAGACCTAGCTTTCTTGGGGTGGCAGGGAGGCTAAAGCATACCTCAGGACAGTCAGTGGTGGGTCCAGCTTCGGCTGGAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp CTGATAACAACAGCTGGCAAGAGACAGCCCAGGCTGGTCCCAAGTTaGCCAGGTCTTGCCACCACACTGGGCTGGCTTCCCCATTGCTCT +
Preference number: 1 (lower is better)
Translates to: LITTAGKRQPRLVPS*PGLATTLGWLPHCS
Trigger: AGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCTGGGCTGTCTCTTGCCAGCTGTTGTTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp CCCAGGCTGGTCCCAAGTTGCCCAGGTCTTGCCACCACACTGGGCTaGCTTCCCCATTGCTCTGCAGTTGCCCAGCTCTGCTTCAAATTA +
Preference number: 1 (lower is better)
Translates to: PRLVPSCPGLATTLG*LPHCSAVAQLCFKL
Trigger: TAATTTGAAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp CACAGCACTGAGCAGGAAGGTGCCACCTTCAACTGTGCTGCCCAGTaGCTCTTGCAAGGCCCCTCACACTGGTGTGTGACTGGTACTCTG +
Preference number: 1 (lower is better)
Translates to: HSTEQEGATFNCAAQ*LLQGPSHWCVTGTL
Trigger: CAGAGTACCAGTCACACACCAGTGTGAGGGGCCTTGCAAGAGCCACTGGGCAGCACAGTTGAAGGTGGCACCTTCCTGCTCAGTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp CCCAGAGGGCGTGATGCCTCGCCAAGTGGACTGAAGGGGTACAACTaGAGGCTCAGTAGAAATGGTGGAAGAAGGGTGGCTGGACCCGAA +
Preference number: 1 (lower is better)
Translates to: PRGRDASPSGLKGYN*RLSRNGGRRVAGPE
Trigger: TTCGGGTCCAGCCACCCTTCTTCCACCATTTCTACTGAGCCTTCAGTTGTACCCCTTCAGTCCACTTGGCGAGGCATCACGCCCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp GCCAGAGGTCTTCAGCCACCAACAGGGTCCAGGCAGGCATCCTCCTaGCTCCCCCAGCAGTCTGCACAGGGTCATATTTCCAGCATAAAA +
Preference number: 1 (lower is better)
Translates to: ARGLQPPTGSRQASS*LPQQSAQGHISSIK
Trigger: TTTTATGCTGGAAATATGACCCTGTGCAGACTGCTGGGGGAGGCAGGAGGATGCCTGCCTGGACCCTGTTGGTGGCTGAAGACCTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp GCAGCTGGACAAACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTaGGCTCTGTCTGCAGTAAGACTCAGCAAGTGGACTTCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: AAGQTCALGPLQLRG*ALSAVRLSKWTSWS
Trigger: GCTCCAGGAAGTCCACTTGCTGAGTCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGTTTGTCCAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp AGTGACCTAACAATCCCAGCTGCAAGAGGCAGCTGGACAAACATGTaGCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGT +
Preference number: 1 (lower is better)
Translates to: SDLTIPAARGSWTNM*PRAFTAQGVGSVCS
Trigger: ACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGTTTGTCCAGCTGCCTCTTGCAGCTGGGATTGTTAGGTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp GCCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTaGCAAGAGACAGCCCAGGCTGGTCCCAAGTTGCCCAGGTCTTGC +
Preference number: 1 (lower is better)
Translates to: AQGSECEEPGSDNNS*QETAQAGPKLPRSC
Trigger: GCAAGACCTGGGCAACTTGGGACCAGCCTGGGCTGTCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp AGTGGACATCTGGCAATGTCTGGACACATTTTTGGTTGTCGTAACTaGGGGACTGCTACAGGCACCTGGCAGGGAGAGGCCGGGATGCTG +
Preference number: 1 (lower is better)
Translates to: SGHLAMSGHIFGCRN*GTATGTWQGEAGML
Trigger: CAGCATCCCGGCCTCTCCCTGCCAGGTGCCTGTAGCAGTCCCCCAGTTACGACAACCAAAAATGTGTCCAGACATTGCCAGATGTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp CACCCACAGGTTGACTGTCTTCCAGCGCTGCCAGAGAGAACAAGCTaGCTTCCCTGTGCTTGCTCAATGACTGTCCCCAGACATCTGAGG +
Preference number: 1 (lower is better)
Translates to: HPQVDCLPALPERTS*LPCACSMTVPRHLR
Trigger: CCTCAGATGTCTGGGGACAGTCATTGAGCAAGCACAGGGAAGTCAGCTTGTTCTCTCTGGCAGCGCTGGAAGACAGTCAACCTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp CTGACACCCAGCTCCAGCTGCTGGCACCAGGACAGGTTAAACAGCTaGGCCAGTGAATCTGACCCTTTCCCGTTGATGCAGGAAAATAGG +
Preference number: 1 (lower is better)
Translates to: LTPSSSCWHQDRLNS*ASESDPFPLMQENR
Trigger: CCTATTTTCCTGCATCAACGGGAAAGGGTCAGATTCACTGGCTCAGCTGTTTAACCTGTCCTGGTGCCAGCAGCTGGAGCTGGGTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp CCAAGTTGCCCAGGTCTTGCCACCACACTGGGCTGGCTTCCCCATTaGTCTGCAGTTGCCCAGCTCTGCTTCAAATTATACAAATCCTGC +
Preference number: 1 (lower is better)
Translates to: PSCPGLATTLGWLPH*SAVAQLCFKLYKSC
Trigger: GCAGGATTTGTATAATTTGAAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp CCCCAGACATCTGAGGACAGGGATCATGTTGCTCCAAGGTCTTCTTaGGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTC +
Preference number: 1 (lower is better)
Translates to: PQTSEDRDHVAPRSS*AKCFPGPRALPGPF
Trigger: GAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTCAAGAAGACCTTGGAGCAACATGATCCCTGTCCTCAGATGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp AACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTaGAGTAAGACTCAGCAAGTGGACTTCCTGGAGCAAGTGACTATA +
Preference number: 1 (lower is better)
Translates to: NMCPRAFTAQGVGSV*SKTQQVDFLEQVTI
Trigger: TATAGTCACTTGCTCCAGGAAGTCCACTTGCTGAGTCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp CAGGAAGCACTGATATTTTCCCTCTGGCCCTGGATCCCATGTAACTaGACATCTCTTCCAGGTGGTACCTTGCTCTGGCTAGCAGGAGGA +
Preference number: 1 (lower is better)
Translates to: QEALIFSLWPWIPCN*TSLPGGTLLWLAGG
Trigger: TCCTCCTGCTAGCCAGAGCAAGGTACCACCTGGAAGAGATGTTCAGTTACATGGGATCCAGGGCCAGAGGGAAAATATCAGTGCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp GAAATGGTGGAAGAAGGGTGGCTGGACCCGAACCTCAGGAAGCACTaGTATTTTCCCTCTGGCCCTGGATCCCATGTAACTGAACATCTC +
Preference number: 1 (lower is better)
Translates to: EMVEEGWLDPNLRKH*YFPSGPGSHVTEHL
Trigger: GAGATGTTCAGTTACATGGGATCCAGGGCCAGAGGGAAAATATCAGTGCTTCCTGAGGTTCGGGTCCAGCCACCCTTCTTCCACCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp TTGCCCAGGTCTTGCCACCACACTGGGCTGGCTTCCCCATTGCTCTaGAGTTGCCCAGCTCTGCTTCAAATTATACAAATCCTGCTAATG +
Preference number: 1 (lower is better)
Translates to: LPRSCHHTGLASPLL*SCPALLQIIQILLM
Trigger: CATTAGCAGGATTTGTATAATTTGAAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp TGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCATaGACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGG +
Preference number: 1 (lower is better)
Translates to: CSRHQEPGHPPLLMP*TSPLVHRLGCPCGW
Trigger: CCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTCCATGGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp TCGAGGCAGGAGGAGCTGCTGGCAGCCAGCTCTCGGCATAAGCTTTaGCATACAGTAAGTGCCTTGCATACTGCTGTATTGCAATTGAAA +
Preference number: 1 (lower is better)
Translates to: SRQEELLAASSRHKL*HTVSALHTAVLQLK
Trigger: TTTCAATTGCAATACAGCAGTATGCAAGGCACTTACTGTATGCCAAAGCTTATGCCGAGAGCTGGCTGCCAGCAGCTCCTCCTGCCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp CTTAAATTCCAGGTTTCATCCTTTCAACCACTGGGCATTCTGAGATaGGGGGCCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAAC +
Preference number: 1 (lower is better)
Translates to: LKFQVSSFQPLGILR*GAQGSECEEPGSDN
Trigger: GTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGGCCCCCCATCTCAGAATGCCCAGTGGTTGAAAGGATGAAACCTGGAATTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp AGGGGATCTGGGATGGTTTTCTCTGCTCCTTTAAGAGGCAGATCCTaGCTTGGCAAGGTCAAAGAGGCAGAGCTAGAATTCTCACTAAAG +
Preference number: 1 (lower is better)
Translates to: RGSGMVFSAPLRGRS*LGKVKEAELEFSLK
Trigger: CTTTAGTGAGAATTCTAGCTCTGCCTCTTTGACCTTGCCAAGTCAGGATCTGCCTCTTAAAGGAGCAGAGAAAACCATCCCAGATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 90 bp ATCTGGGATGGTTTTCTCTGCTCCTTTAAGAGGCAGATCCTGACTTaGCAAGGTCAAAGAGGCAGAGCTAGAATTCTCACTAAAGCCCTT +
Preference number: 1 (lower is better)
Translates to: IWDGFLCSFKRQILT*QGQRGRARILTKAL
Trigger: AAGGGCTTTAGTGAGAATTCTAGCTCTGCCTCTTTGACCTTGCCAAGTCAGGATCTGCCTCTTAAAGGAGCAGAGAAAACCATCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 90 bp GGAAGCCTTCCAATTGGATTAACCAAAAGCATGTACTCCACTGTTTaGCACAGAGATGGGGTTAGAGAGGGAAATAACCAGTTTGGTTTT +
Preference number: 1 (lower is better)
Translates to: GSLPIGLTKSMYSTV*HRDGVREGNNQFGF
Trigger: AAAACCAAACTGGTTATTTCCCTCTCTAACCCCATCTCTGTGTCAAACAGTGGAGTACATGCTTTTGGTTAATCCAATTGGAAGGCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 90 bp TATACTTTCATTCTCAGTAAAACCCTTCATTCCTTCCTTGCTTTGTaGATTTTGCCCAATTCTTTGTTCAAGACATCAAGAACCTGGACA +
Preference number: 1 (lower is better)
Translates to: YTFILSKTLHSFLAL*ILPNSLFKTSRTWT
Trigger: TGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGGCAAAATGCACAAAGCAAGGAAGGAATGAAGGGTTTTACTGAGAATGAAAGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 90 bp CAGCTGGCAAGAGACAGCCCAGGCTGGTCCCAAGTTGCCCAGGTCTaGCCACCACACTGGGCTGGCTTCCCCATTGCTCTGCAGTTGCCC +
Preference number: 2 (lower is better)
Translates to: QLARDSPGWSQVAQV*PPHWAGFPIALQLP
Trigger: GGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCTGGGCTGTCTCTTGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAGGACAGCGACTGGCCTaGTCCTTCCGGCAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: PLPPPARLPQWYMQLVALGQRLA*SFRQGR
Trigger: TCTTCCCTGCCGGAAGGACCAGGCCAGTCGCTGTCC...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 90 bp TCTGATAACAACAGCTGGCAAGAGACAGCCCAGGCTGGTCCCAAGTaGCCCAGGTCTTGCCACCACACTGGGCTGGCTTCCCCATTGCTC +
Preference number: 2 (lower is better)
Translates to: SDNNSWQETAQAGPK*PRSCHHTGLASPLL
Trigger: GAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCTGGGCTGTCTCTTGCCAGCTGTTGTTATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATGTGGCCTCCCCTTCTaGAAGGGGCTAGCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: PLPPPARLPQWYMQLVALCGLPF*KGLAGA
Trigger: AGCACCAGCTAGCCCCTTCCAGAAGGGGAGGCCACA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACCTCAGTCCCTTCAGCTaGGGCTCAGACCCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNLSPFS*GSDPAP
Trigger: TGGAGCTGGGTCTGAGCCCCAGCTGAAGGGACTGAG...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACGAAGGGGCTAGCTGGTaGTCTCCACCACAACCACAC +
Preference number: 2 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNEGASW*SPPQPH
Trigger: GTGTGGTTGTGGTGGAGAGCACCAGCTAGCCCCTTC...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAACACCCAGCTCCAGCTaGTGGCACCAGGACAGGTTA +
Preference number: 2 (lower is better)
Translates to: TCALGPLQLRGWALSAVRTPSSS*WHQDRL
Trigger: TAACCTGTCCTGGTGCCAGCAGCTGGAGCTGGGTGT...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAGTCTTGCCACCACACTaGGCTGGCTTCCCCATTGCT +
Preference number: 2 (lower is better)
Translates to: PLPPPARLPQWYMQLVALVLPPH*AGFPIA
Trigger: AGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGAC...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 90 bp CCAAGGCCAGTCAGCAAATCTGAAGGGCTAACACTCAGATCTCACTaGTGCTCTGTCAGTGGTAGGGGGCTGGGTGTCGAGGGGATCTGG +
Preference number: 2 (lower is better)
Translates to: PRPVSKSEGLTLRSH*CSVSGRGLGVEGIW
Trigger: CCAGATCCCCTCGACACCCAGCCCCCTACCACTGACAGAGCACAAGTGAGATCTGAGTGTTAGCCCTTCAGATTTGCTGACTGGCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGGGGCCGGGCAAATGTaGCCTCCCCTTCTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSGAGQM*PPLLEG
Trigger: CCCTTCCAGAAGGGGAGGCCACATTTGCCCGGCCCC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAAGCTTCCCTGCCCTGTaGCCTCCCGAGACGGGAAGC +
Preference number: 2 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRSFPAL*PPETGS
Trigger: GCTTCCCGTCTCGGGAGGCCACAGGGCAGGGAAGCT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAAACCACTCTCTAGCATaGAAAGGACAGCGACTGGCC +
Preference number: 2 (lower is better)
Translates to: PLPPPARLPQWYMQLVALNHSLA*KGQRLA
Trigger: GGCCAGTCGCTGTCCTTTTCATGCTAGAGAGTGGTT...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAAAGCTGTCTGACCCATaGAGCTTAGGGCAGCCATTG +
Preference number: 2 (lower is better)
Translates to: TCALGPLQLRGWALSAVRKLSDP*SLGQPL
Trigger: CAATGGCTGCCCTAAGCTGCATGGGTCAGACAGCTT...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAACTGGAAGGGGCTAGCTaGTGCTCTCCACCACAACCA +
Preference number: 2 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQLEGAS*CSPPQP
Trigger: TGGTTGTGGTGGAGAGCACCAGCTAGCCCCTTCCAG...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAAGGGCGGAAGCCAGCTaGCCAGAGGTCTTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRRAEAS*PEVFSH
Trigger: GTGGCTGAAGACCTCTGGCCAGCTGGCTTCCGCCCT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGACCAGGCCCCACTCTTTaGCTCTGCATATATAGCAGG +
Preference number: 2 (lower is better)
Translates to: TCALGPLQLRGWALSAVRPGPTL*LCIYSR
Trigger: CCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGG...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAGGACAGGGATCATGTTaGTCCAAGGTCTTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: TCALGPLQLRGWALSAVRGQGSC*SKVFLS
Trigger: GCTCAAGAAGACCTTGGAGCAACATGATCCCTGTCC...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 90 bp CTGTCTTCCAGCGCTGCCAGAGAGAACAAGCTGACTTCCCTGTGCTaGCTCAATGACTGTCCCCAGACATCTGAGGACAGGGATCATGTT +
Preference number: 2 (lower is better)
Translates to: LSSSAARENKLTSLC*LNDCPQTSEDRDHV
Trigger: AACATGATCCCTGTCCTCAGATGTCTGGGGACAGTCATTGAGCAAGCACAGGGAAGTCAGCTTGTTCTCTCTGGCAGCGCTGGAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAACAGCATAAAATCCTCTaGAGGCCCCTTCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQQHKIL*RPLQQE
Trigger: CTCCTGCTGAAGGGGCCTTCAGAGGATTTTATGCTG...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGATTACTTCCGAGTAACTaGTGGGTGCAGGATGTTCTG +
Preference number: 2 (lower is better)
Translates to: TCALGPLQLRGWALSAVRLLPSN*WVQDVL
Trigger: CAGAACATCCTGCACCCATCAGTTACTCGGAAGTAA...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATCGGTCCAAAGGGTCTaGTGGCTTTTATTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: PLPPPARLPQWYMQLVALSVQRV*WLLLCL
Trigger: GAGACACAATAAAAGCCAGCAGACCCTTTGGACCGA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTCTCTGCAGAGGGGCTaGGACCTGTGCCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: GDTDTIKFILPMKLQHRESLQRG*DLCQAA
Trigger: AGCTGCCTGGCACAGGTCCCAGCCCCTCTGCAGAGA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGTGTCCCCACCAGCCTTaGTCGGTCCAAAGGGTCTGC +
Preference number: 2 (lower is better)
Translates to: EERVSSDLTAENYNNKPECPHQP*SVQRVC
Trigger: GCAGACCCTTTGGACCGACCAAGGCTGGTGGGGACA...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTCAGTGGTAGGGGGCTaGGTGTCGAGGGGATCTGGG +
Preference number: 2 (lower is better)
Translates to: GDTDTIKFILPMKLQHRESVVGG*VSRGSG
Trigger: CCCAGATCCCCTCGACACCCAGCCCCCTACCACTGA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACCCAGCTCCAGCTGCTaGCACCAGGACAGGTTAAAC +
Preference number: 2 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSPSSSC*HQDRLN
Trigger: GTTTAACCTGTCCTGGTGCCAGCAGCTGGAGCTGGG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 90 bp GCTTGCTCAATGACTGTCCCCAGACATCTGAGGACAGGGATCATGTaGCTCCAAGGTCTTCTTGAGCTAAATGTTTCCCAGGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: ACSMTVPRHLRTGIM*LQGLLELNVSQVPG
Trigger: CCCTGGGACCTGGGAAACATTTAGCTCAAGAAGACCTTGGAGCAACATGATCCCTGTCCTCAGATGTCTGGGGACAGTCATTGAGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGATCAGCAGGAGGCCCCTaGGAGAAAATCCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRSAGGP*EKIQPS
Trigger: AGATGGCTGGATTTTCTCTCAGGGGCCTCCTGCTGA...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAATTTGTCAAGGGCAGTaGTGGCGTAGGACCAGGAGG +
Preference number: 2 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSICQGQ*WRRTRR
Trigger: CCTCCTGGTCCTACGCCATCACTGCCCTTGACAAAT...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGACTGTCCCCAGACATCTaGGGACAGGGATCATGTTGC +
Preference number: 2 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRLSPDI*GQGSCC
Trigger: GCAACATGATCCCTGTCCTCAGATGTCTGGGGACAG...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCCTCCCCCAGCAGTCTaGACAGGGTCATATTTCCAG +
Preference number: 2 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSPPPAV*TGSYFQ
Trigger: CTGGAAATATGACCCTGTGCAGACTGCTGGGGGAGG...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GAGCTAGAATTCTCACTAAAGCCCTTCCCTCCTCTGCTTGGGAGGGGCATGAGTAAGCTGACTTCCCTGTaGTTGCTCAATGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: ELEFSLKPFPPLLGRGMSKLTSL*LLNDCP
Trigger: GGGACAGTCATTGAGCAAGCACAGGGAAGTCAGCTT...ACTCATGCCCCTCCCAAGCAGAGGAGGGAAGGGCTTTAGTGAGAATTCTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAGACTGTCCTGAGGTATaGTTTAGCCTCCCTGCCACC +
Preference number: 2 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRDCPEV*FSLPAT
Trigger: GGTGGCAGGGAGGCTAAAGCATACCTCAGGACAGTC...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTATCCCTGAGGGGCCCTaGTCCCCTCACAGTGTCCCC +
Preference number: 2 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGIPEGP*SPHSVP
Trigger: GGGGACACTGTGAGGGGACCAGGGCCCCTCAGGGAT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 90 bp CAGGTCTTGCCACCACACTGGGCTGGCTTCCCCATTGCTCTGCAGTaGCCCAGCTCTGCTTCAAATTATACAAATCCTGCTAATGACAGA +
Preference number: 2 (lower is better)
Translates to: QVLPPHWAGFPIALQ*PSSASNYTNPANDR
Trigger: TCTGTCATTAGCAGGATTTGTATAATTTGAAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTAGCAGGGTGGCACCCTaGCCCGTGGCTCAGAACCTA +
Preference number: 2 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGSRVAP*PVAQNL
Trigger: TAGGTTCTGAGCCACGGGTCAGGGTGCCACCCTGCT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAAGTAAATACATGGGATaGACAAGGAACCGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: PLPPPARLPQWYMQLVALSKYMG*TRNRQR
Trigger: TCTCTGACGGTTCCTTGTTCATCCCATGTATTTACT...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATTCTATTTGTTTCTTTaGAGGTGCCCATTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: PLPPPARLPQWYMQLVALFYLFL*RCPFEG
Trigger: GCCCTCAAATGGGCACCTTCAAAGAAACAAATAGAA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAACTGTCTTCCAGCGCTaGCAGAGAGAACAAGCTGAC +
Preference number: 2 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRTVFQR*QREQAD
Trigger: GTCAGCTTGTTCTCTCTGGCAGCGCTGGAAGACAGT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTTCAGTCCCACCACACTaGCCTGCCTCCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGSVPPH*PASTAQ
Trigger: CTGGGCAGTGGAGGCAGGGCAGTGTGGTGGGACTGA...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTGACAGGTTAAACAGCTaGGCCAGTGAATCTGACCCT +
Preference number: 2 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSDRLNS*ASESDP
Trigger: AGGGTCAGATTCACTGGCTCAGCTGTTTAACCTGTC...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACAGCTCTCTTCCAGCTaGTTCTTGTCCCCTTACTTC +
Preference number: 2 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSQLSSS*FLSPYF
Trigger: GAAGTAAGGGGACAAGAAGCAGCTGGAAGAGAGCTG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCATCTGATAACAACAGCTaGCAAGAGACAGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSSDNNS*QETAQA
Trigger: AGCCTGGGCTGTCTCTTGCCAGCTGTTGTTATCAGA...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTCACTGTTGCCACCACTaGGCACCCTGGCACTGGTCA +
Preference number: 2 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGHCCHH*APWHWS
Trigger: TGACCAGTGCCAGGGTGCCCAGTGGTGGCAACAGTG...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCGAAAATCCAGCCATCTaGGGCTCAGTCCCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAENPAI*GSVPSA
Trigger: AGCTGAAGGGACTGAGCCTCAGATGGCTGGATTTTC...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGCCAGAGAGAACAAGCTaGCTTCCCTGTGCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: GDTDTIKFILPMKLQHREPERTS*LPCACS
Trigger: TGAGCAAGCACAGGGAAGTCAGCTTGTTCTCTCTGG...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCTTTTATTGTGTCTCTaGAGAGGGGCTGGGACCTGT +
Preference number: 2 (lower is better)
Translates to: EERVSSDLTAENYNNKPELLLCL*RGAGTC
Trigger: ACAGGTCCCAGCCCCTCTGCAGAGACACAATAAAAG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCGAGTAACTGATGGGTaGAGGATGTTCTGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNARVTDG*RMFWAL
Trigger: AAGGGCCCAGAACATCCTGCACCCATCAGTTACTCG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTAGGCTGGTCCCAAGTTaGCCAGGTCTTGCCACCACA +
Preference number: 2 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGRLVPS*PGLATT
Trigger: TGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCCTAACAATCCCAGCTaGAAGAGGCAGCTGGACAAA +
Preference number: 2 (lower is better)
Translates to: EERVSSDLTAENYNNKPEPNNPS*KRQLDK
Trigger: TTTGTCCAGCTGCCTCTTGCAGCTGGGATTGTTAGG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR TCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGTTAAGAGGCAGATCCTaGCTTGGCAAGGTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: EERVSSDLTAENYNNKPELRGRS*LGKVKE
Trigger: CTCTTTGACCTTGCCAAGTCAGGATCTGCCTCTTAA...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTTGGGATGGTTTTCTCTaGTCCTTTAAGAGGCAGATC +
Preference number: 2 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSWDGFL*SFKRQI
Trigger: GATCTGCCTCTTAAAGGAGCAGAGAAAACCATCCCA...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGTCCAAAGGGTCTGCTaGCTTTTATTGTGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: EERVSSDLTAENYNNKPEVQRVC*LLLCLC
Trigger: GCAGAGACACAATAAAAGCCAGCAGACCCTTTGGAC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGACCTTCATTCCTTCCTTaGTTTGTGCATTTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRPSFLP*FVHFAQ
Trigger: TTGGGCAAAATGCACAAAGCAAGGAAGGAATGAAGG...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGCAGTTGCCCAGCTCTaGTTCAAATTATACAAATCC +
Preference number: 2 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSAVAQL*FKLYKS
Trigger: GGATTTGTATAATTTGAAGCAGAGCTGGGCAACTGC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTAAGACATCAAGAACCTaGACACCCTCCACTGTTAAT +
Preference number: 2 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSKTSRT*TPSTVN
Trigger: ATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCAGTCAGTAAATACATaGGATGAACAAGGAACCGTC +
Preference number: 2 (lower is better)
Translates to: EERVSSDLTAENYNNKPEQSVNT*DEQGTV
Trigger: GACGGTTCCTTGTTCATCCCATGTATTTACTGACTG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp CAGCGACTGGCCTGGTCCTTCCGGCAGGGAAGAGCTTaGGGGCTGGTCCTGACACCCAGCTCCAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: QRLAWSFRQGRA*GLVLTPSSSCW
Trigger: CCAGCAGCTGGAGCTGGGTGTCAGGACCAGCCCGCAAGCTCTTCCCTGCCGGAAGGACCAGGCCAGTCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp CCTGTGGCCTCCCGAGACGGGAAGCTGTCTGACCCATaGAGCTTAGGGCAGCCATTGCGGAGCACGGCCTCC +
Preference number: 3 (lower is better)
Translates to: PVASRDGKLSDP*SLGQPLRSTAS
Trigger: GGAGGCCGTGCTCCGCAATGGCTGCCCTAAGCTGCATGGGTCAGACAGCTTCCCGTCTCGGGAGGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp AGGTGGCACACAGCACCTGCTCCCATAGTTCCCCACTaGGCCTGCCCAGAGGGCGTGATGCCTCGCCAAGTG +
Preference number: 3 (lower is better)
Translates to: RWHTAPAPIVPH*ACPEGVMPRQV
Trigger: CACTTGGCGAGGCATCACGCCCTCTGGGCAGGCTCAGTGGGGAACTATGGGAGCAGGTGCTGTGTGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp AGTTCTGCTGCTTCCCCACCAAGGGCGGAAGCCAGCTaGCCAGAGGTCTTCAGCCACCAACAGGGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: SSAASPPRAEAS*PEVFSHQQGPG
Trigger: GCCTGGACCCTGTTGGTGGCTGAAGACCTCTGGCCAGCTGGCTTCCGCCCTTGGTGGGGAAGCAGCAGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp GGCTGGTCCCAAGTTGCCCAGGTCTTGCCACCACACTaGGCTGGCTTCCCCATTGCTCTGCAGTTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: GWSQVAQVLPPH*AGFPIALQLPS
Trigger: GCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp TTAGAGCCACCCCTTCACTGCTGCCCCTGGTACCTGTaGCCACTACCGCCACCAGCACGACTCCCACAGTGG +
Preference number: 3 (lower is better)
Translates to: LEPPLHCCPWYL*PLPPPARLPQW
Trigger: CCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGGTCACAGGTACCAGGGGCAGCAGTGAAGGGGTGGCTCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp GTCCCAAGTTGCCCAGGTCTTGCCACCACACTGGGCTaGCTTCCCCATTGCTCTGCAGTTGCCCAGCTCTGC +
Preference number: 3 (lower is better)
Translates to: VPSCPGLATTLG*LPHCSAVAQLC
Trigger: GCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGACCTGGGCAACTTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp AGAAAATCCAGCCATCTGAGGCTCAGTCCCTTCAGCTaGGGCTCAGACCCAGCTCCAGGGGGCCGGGCAAAT +
Preference number: 3 (lower is better)
Translates to: RKSSHLRLSPFS*GSDPAPGGRAN
Trigger: ATTTGCCCGGCCCCCTGGAGCTGGGTCTGAGCCCCAGCTGAAGGGACTGAGCCTCAGATGGCTGGATTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAAGGCTTGGCTTCCCTTaGCTGCTGCAGCCCCGTAGG +
Preference number: 3 (lower is better)
Translates to: PLPPPARLPQWYMQLVALRLGFP*LLQPRR
Trigger: CCTACGGGGCTGCAGCAGCAAAGGGAAGCCAAGCCT...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp GAGCAGGAAGGTGCCACCTTCAACTGTGCTGCCCAGTaGCTCTTGCAAGGCCCCTCACACTGGTGTGTGACT +
Preference number: 3 (lower is better)
Translates to: EQEGATFNCAAQ*LLQGPSHWCVT
Trigger: AGTCACACACCAGTGTGAGGGGCCTTGCAAGAGCCACTGGGCAGCACAGTTGAAGGTGGCACCTTCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp GCCTGCCCAGAGGGCGTGATGCCTCGCCAAGTGGACTaGAGGGGTACAACTGAAGGCTCAGTAGAAATGGTG +
Preference number: 3 (lower is better)
Translates to: ACPEGVMPRQVD*RGTTEGSVEMV
Trigger: CACCATTTCTACTGAGCCTTCAGTTGTACCCCTTCAGTCCACTTGGCGAGGCATCACGCCCTCTGGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp CAAATGTGGCCTCCCCTTCTGGAAGGGGCTAGCTGGTaGTCTCCACCACAACCACACCTCCACCTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: QMWPPLLEGASW*SPPQPHLHLFF
Trigger: GAAGAAGAGGTGGAGGTGTGGTTGTGGTGGAGAGCACCAGCTAGCCCCTTCCAGAAGGGGAGGCCACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp GCCGAAGCTGGACCCACCACTGACTGTCCTGAGGTATaGTTTAGCCTCCCTGCCACCCCAAGAAAGCTAGGT +
Preference number: 3 (lower is better)
Translates to: AEAGPTTDCPEV*FSLPATPRKLG
Trigger: ACCTAGCTTTCTTGGGGTGGCAGGGAGGCTAAAGCATACCTCAGGACAGTCAGTGGTGGGTCCAGCTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp ACAATCCCAGCTGCAAGAGGCAGCTGGACAAACATGTaGCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: TIPAARGSWTNM*PRAFTAQGVGS
Trigger: AGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGTTTGTCCAGCTGCCTCTTGCAGCTGGGATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp AAACACCACTGTTGCCACCACTGGGCACCCTGGCACTaGTCACTGGACTTGGCATTAGAGCCACCCCTTCAC +
Preference number: 3 (lower is better)
Translates to: KHHCCHHWAPWH*SLDLALEPPLH
Trigger: GTGAAGGGGTGGCTCTAATGCCAAGTCCAGTGACCAGTGCCAGGGTGCCCAGTGGTGGCAACAGTGGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp CCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTaGAGTAAGACTCAGCAAGTGGACTTCCTGGAGCAA +
Preference number: 3 (lower is better)
Translates to: PRAFTAQGVGSV*SKTQQVDFLEQ
Trigger: TTGCTCCAGGAAGTCCACTTGCTGAGTCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp CTGGCAATGTCTGGACACATTTTTGGTTGTCGTAACTaGGGGACTGCTACAGGCACCTGGCAGGGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: LAMSGHIFGCRN*GTATGTWQGEA
Trigger: GGCCTCTCCCTGCCAGGTGCCTGTAGCAGTCCCCCAGTTACGACAACCAAAAATGTGTCCAGACATTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGTGTCCCCACCAGCCTaGGTCGGTCCAAAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSVSPPA*VGPKGL
Trigger: CAGACCCTTTGGACCGACCAAGGCTGGTGGGGACAC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGAGCTTAGGGCAGCCATaGCGGAGCACGGCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: EERVSSDLTAENYNNKPESLGQP*RSTASC
Trigger: GCAGGAGGCCGTGCTCCGCAATGGCTGCCCTAAGCT...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp AGCTCCAGCTGCTGGCACCAGGACAGGTTAAACAGCTaGGCCAGTGAATCTGACCCTTTCCCGTTGATGCAG +
Preference number: 3 (lower is better)
Translates to: SSSCWHQDRLNS*ASESDPFPLMQ
Trigger: CTGCATCAACGGGAAAGGGTCAGATTCACTGGCTCAGCTGTTTAACCTGTCCTGGTGCCAGCAGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp TCCAGCGCTGCCAGAGAGAACAAGCTGACTTCCCTGTaGTTGCTCAATGACTGTCCCCAGACATCTGAGGAC +
Preference number: 3 (lower is better)
Translates to: SSAARENKLTSL*LLNDCPQTSED
Trigger: GTCCTCAGATGTCTGGGGACAGTCATTGAGCAAGCACAGGGAAGTCAGCTTGTTCTCTCTGGCAGCGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACACACTCAGATCTCACTaGTGCTCTGTCAGTGGTAGG +
Preference number: 3 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNTLRSH*CSVSGR
Trigger: CCTACCACTGACAGAGCACAAGTGAGATCTGAGTGT...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGGGCTGGCTTCCCCATaGCTCTGCAGTTGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: EERVSSDLTAENYNNKPEGLASP*LCSCPA
Trigger: AGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp GTTGACTGTCTTCCAGCGCTGCCAGAGAGAACAAGCTaGCTTCCCTGTGCTTGCTCAATGACTGTCCCCAGA +
Preference number: 3 (lower is better)
Translates to: VDCLPALPERTS*LPCACSMTVPR
Trigger: TCTGGGGACAGTCATTGAGCAAGCACAGGGAAGTCAGCTTGTTCTCTCTGGCAGCGCTGGAAGACAGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp CAGCTGAGTAGACAGGAGCAATGTCCAAGATCACACTaGAAACACCACTGTTGCCACCACTGGGCACCCTGG +
Preference number: 3 (lower is better)
Translates to: QLSRQEQCPRSH*KHHCCHHWAPW
Trigger: CCAGGGTGCCCAGTGGTGGCAACAGTGGTGTTTTCAGTGTGATCTTGGACATTGCTCCTGTCTACTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp GAAGAAGGGTGGCTGGACCCGAACCTCAGGAAGCACTaGTATTTTCCCTCTGGCCCTGGATCCCATGTAACT +
Preference number: 3 (lower is better)
Translates to: EEGWLDPNLRKH*YFPSGPGSHVT
Trigger: AGTTACATGGGATCCAGGGCCAGAGGGAAAATATCAGTGCTTCCTGAGGTTCGGGTCCAGCCACCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp CGTGATGCCTCGCCAAGTGGACTGAAGGGGTACAACTaGAGGCTCAGTAGAAATGGTGGAAGAAGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: RDASPSGLKGYN*RLSRNGGRRVA
Trigger: AGCCACCCTTCTTCCACCATTTCTACTGAGCCTTCAGTTGTACCCCTTCAGTCCACTTGGCGAGGCATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp CAGGTTTCATCCTTTCAACCACTGGGCATTCTGAGATaGGGGGCCCAAGGATCTGAGTGTGAAGAGCCTGGT +
Preference number: 3 (lower is better)
Translates to: QVSSFQPLGILR*GAQGSECEEPG
Trigger: ACCAGGCTCTTCACACTCAGATCCTTGGGCCCCCCATCTCAGAATGCCCAGTGGTTGAAAGGATGAAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCCCAACACCAATCATTaGTCAAGGGCAGTGATGGCG +
Preference number: 3 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSPNTNH*SRAVMA
Trigger: CGCCATCACTGCCCTTGACAAATGATTGGTGTTGGG...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTACATTCCTTCCTTGCTTaGTGCATTTTGCCCAATTCT +
Preference number: 3 (lower is better)
Translates to: PLPPPARLPQWYMQLVALHSFLA*CILPNS
Trigger: AGAATTGGGCAAAATGCACAAAGCAAGGAAGGAATG...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGACCCATTGCTCTGCAGTaGCCCAGCTCTGCTTCAAAT +
Preference number: 3 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRPIALQ*PSSASN
Trigger: ATTTGAAGCAGAGCTGGGCAACTGCAGAGCAATGGG...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp TCTGAGGACAGGGATCATGTTGCTCCAAGGTCTTCTTaGGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCA +
Preference number: 3 (lower is better)
Translates to: SEDRDHVAPRSS*AKCFPGPRALP
Trigger: TGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTCAAGAAGACCTTGGAGCAACATGATCCCTGTCCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp TCTTGCCACCACACTGGGCTGGCTTCCCCATTGCTCTaGAGTTGCCCAGCTCTGCTTCAAATTATACAAATC +
Preference number: 3 (lower is better)
Translates to: SCHHTGLASPLL*SCPALLQIIQI
Trigger: GATTTGTATAATTTGAAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp AGAAGGGCTGTGGACCAGAGAGGTTTTCCCTCCCAGTaGACATCTGGCAATGTCTGGACACATTTTTGGTTG +
Preference number: 3 (lower is better)
Translates to: RRAVDQRGFPSQ*TSGNVWTHFWL
Trigger: CAACCAAAAATGTGTCCAGACATTGCCAGATGTCCACTGGGAGGGAAAACCTCTCTGGTCCACAGCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTAGGACAGGGATCATGTaGCTCCAAGGTCTTCTTGAG +
Preference number: 3 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSRTGIM*LQGLLE
Trigger: CTCAAGAAGACCTTGGAGCAACATGATCCCTGTCCT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp CTGATATTTTCCCTCTGGCCCTGGATCCCATGTAACTaGACATCTCTTCCAGGTGGTACCTTGCTCTGGCTA +
Preference number: 3 (lower is better)
Translates to: LIFSLWPWIPCN*TSLPGGTLLWL
Trigger: TAGCCAGAGCAAGGTACCACCTGGAAGAGATGTTCAGTTACATGGGATCCAGGGCCAGAGGGAAAATATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGGTCTGCTGGCTTTTATaGTGTCTCTGCAGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: GDTDTIKFILPMKLQHREVCWLL*CLCRGA
Trigger: AGCCCCTCTGCAGAGACACAATAAAAGCCAGCAGAC...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTATGAAACTATGTCTGTaGAGTCAGTCCCACCACACT +
Preference number: 3 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSMKLCL*SQSHHT
Trigger: AGTGTGGTGGGACTGACTCAACAGACATAGTTTCAT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp CTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTaGGAGAATCACCTCAAGGAGCTGTCAACAGCATCT +
Preference number: 3 (lower is better)
Translates to: LRLDSRELQQQA*ENHLKELSTAS
Trigger: AGATGCTGTTGACAGCTCCTTGAGGTGATTCTCTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGACCATCAAATTCATTTaGCCAATGAAGCTGCAGCAC +
Preference number: 3 (lower is better)
Translates to: EERVSSDLTAENYNNKPETIKFI*PMKLQH
Trigger: GTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGT...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTTTTGAAGGTGCCCATTaGAGGGCAGAAAGGACAGGA +
Preference number: 3 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGFEGAH*RAERTG
Trigger: TCCTGTCCTTTCTGCCCTCAAATGGGCACCTTCAAA...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp AACATTGTTCTCGTCATTGTTCACACACAGGGAGGCTaGTATAGAATACACCAGTCTCACCCTGAAAGACAC +
Preference number: 3 (lower is better)
Translates to: NIVLVIVHTQGG*YRIHQSHPERH
Trigger: GTGTCTTTCAGGGTGAGACTGGTGTATTCTATACCAGCCTCCCTGTGTGTGAACAATGACGAGAACAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTCCCTTCATTCCTTCCTaGCTTTGTGCATTTTGCCCA +
Preference number: 3 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGPFIPS*LCAFCP
Trigger: TGGGCAAAATGCACAAAGCAAGGAAGGAATGAAGGG...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp GTGTGGAGGCAGACACATGGATCCACTAATTCACTGTaGCCTTGGGTTAATTGTTCTAAGCCTCAGTTTAGT +
Preference number: 3 (lower is better)
Translates to: VWRQTHGSTNSL*PWVNCSKPQFS
Trigger: ACTAAACTGAGGCTTAGAACAATTAACCCAAGGTCACAGTGAATTAGTGGATCCATGTGTCTGCCTCCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp CACCTGAAGGTTAAAAACGATGGAAGACCCAACAGCTaGCTGTCAGACATAGTTACAGGAGTAGTGAGATTT +
Preference number: 3 (lower is better)
Translates to: HLKVKNDGRPNS*LSDIVTGVVRF
Trigger: AAATCTCACTACTCCTGTAACTATGTCTGACAGCCAGCTGTTGGGTCTTCCATCGTTTTTAACCTTCAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR TCA 72 bp CCAATTGGATTAACCAAAAGCATGTACTCCACTGTTTaGCACAGAGATGGGGTTAGAGAGGGAAATAACCAG +
Preference number: 3 (lower is better)
Translates to: PIGLTKSMYSTV*HRDGVREGNNQ
Trigger: CTGGTTATTTCCCTCTCTAACCCCATCTCTGTGTCAAACAGTGGAGTACATGCTTTTGGTTAATCCAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp AATGGATGTGATGAAACTAACAAGGGCCCTGACTTGTaGTGTCAAGAAGCCTCTGAAGAAGTGACATTTAAG +
Preference number: 3 (lower is better)
Translates to: NGCDETNKGPDL*CQEASEEVTFK
Trigger: CTTAAATGTCACTTCTTCAGAGGCTTCTTGACAGCACAAGTCAGGGCCCTTGTTAGTTTCATCACATCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR-3UTR CAA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTCTTGCTTTGTGCATTTaGCCCAATTCTTTGTTCAAG +
Preference number: 3 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGLALCI*PNSLFK
Trigger: CTTGAACAAAGAATTGGGCAAAATGCACAAAGCAAG...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp CCACTATGTTTCGATATCTACCATGGATTGGGCATGTaGTACGGGTCACAGAAGATAATTTTGTATATGGTT +
Preference number: 3 (lower is better)
Translates to: PLCFDIYHGLGM*YGSQKIILYMV
Trigger: AACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAGATATCGAAACATAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR GCA 72 bp ATTCTCAGTAAAACCCTTCATTCCTTCCTTGCTTTGTaGATTTTGCCCAATTCTTTGTTCAAGACATCAAGA +
Preference number: 3 (lower is better)
Translates to: ILSKTLHSFLAL*ILPNSLFKTSR
Trigger: TCTTGATGTCTTGAACAAAGAATTGGGCAAAATGCACAAAGCAAGGAAGGAATGAAGGGTTTTACTGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CCA 72 bp AAAAAGAAAGAAAGAAAGAAAAGGGATGGATTAGACTaGGTAACCACTATGTTTCGATATCTACCATGGATT +
Preference number: 3 (lower is better)
Translates to: KKKERKKRDGLD*VTTMFRYLPWI
Trigger: AATCCATGGTAGATATCGAAACATAGTGGTTACCCAGTCTAATCCATCCCTTTTCTTTCTTTCTTTCTTTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp ACAGCGACTGGCCTGGTCCTTCCGGCAGGGAAGAGCTaGCGGGCTGGTCCTGACACCCAGCTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TATGLVLPAGKS*RAGPDTQLQLL
Trigger: CAGCAGCTGGAGCTGGGTGTCAGGACCAGCCCGCAAGCTCTTCCCTGCCGGAAGGACCAGGCCAGTCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp TGCCACCACTGGGCACCCTGGCACTGGTCACTGGACTaGGCATTAGAGCCACCCCTTCACTGCTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CHHWAPWHWSLD*ALEPPLHCCPW
Trigger: CCAGGGGCAGCAGTGAAGGGGTGGCTCTAATGCCAAGTCCAGTGACCAGTGCCAGGGTGCCCAGTGGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAACGGAGCACGGCCTCCTaGAGGGCTGCGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQRSTAS*RAAACP
Trigger: GGGACAGGCCGCAGCCCTGCAGGAGGCCGTGCTCCG...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTGGCGAGTGGGGCCCCTaGTTGAAGACGCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSGEWGP*LKTPVW
Trigger: CCAGACAGGCGTCTTCAACCAGGGGCCCCACTCGCC...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATGGGAGGGGCATGAGTaGAGGGCAGCTGCCCTACCC +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALWEGHE*RAAALP
Trigger: GGGTAGGGCAGCTGCCCTTCACTCATGCCCCTCCCA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGACCCATAGTTCCCCACTaGGCCTGCCCAGAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRPIVPH*ACPEGV
Trigger: CACGCCCTCTGGGCAGGCTCAGTGGGGAACTATGGG...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTGGCTTGGCTTCCCTTTaGTGCTGCAGCCCCGTAGGG +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSGLASL*CCSPVG
Trigger: CCCTACGGGGCTGCAGCAGCAAAGGGAAGCCAAGCC...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAGGGGCCGGGCAAATGTaGCCTCCCCTTCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRGAGQM*PPLLEG
Trigger: CCCTTCCAGAAGGGGAGGCCACATTTGCCCGGCCCC...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAGGCCTCCTGCAGGGCTaGGGCCTGTCCCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRGLLQG*GLSPCS
Trigger: GCTGCAGGGGGACAGGCCGCAGCCCTGCAGGAGGCC...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATCAGTCCCACCACACTaGCCTGCCTCCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALSVPPH*PASTAQ
Trigger: CTGGGCAGTGGAGGCAGGGCAGTGTGGTGGGACTGA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACGGGGAAGGGCCCATCTaGGAGCACATCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNGEGPI*EHISSG
Trigger: ACCGCTGCTGATGTGCTCCCAGATGGGCCCTTCCCC...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTTTCAGCTTCTCGTCCTaGGGGAAGGGCCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSFSFSS*GKGPSG
Trigger: CCCAGATGGGCCCTTCCCCCAGGACGAGAAGCTGAA...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTCTGATCCCCAGCTCCTaGGCCATCAGGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSLIPSS*AIRLRM
Trigger: CATCCTCAGCCTGATGGCCCAGGAGCTGGGGATCAG...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTCTCAGTCCCTTCAGCTaGGGCTCAGACCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSLSPFS*GSDPAP
Trigger: TGGAGCTGGGTCTGAGCCCCAGCTGAAGGGACTGAG...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAGGCAGGAGGAGCTGCTaGCAGCCAGCTCTCGGCATA +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALGRRSC*QPALGI
Trigger: TATGCCGAGAGCTGGCTGCCAGCAGCTCCTCCTGCC...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp CAGCCTTGGTCGGTCCAAAGGGTCTGCTGGCTTTTATaGTGTCTCTGCAGAGGGGCTGGGACCTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QPWSVQRVCWLL*CLCRGAGTCAR
Trigger: CCTGGCACAGGTCCCAGCCCCTCTGCAGAGACACAATAAAAGCCAGCAGACCCTTTGGACCGACCAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTCCGAGATCGCACCACTaGACTCCAGGCAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSPRSHH*TPGRQQ
Trigger: TTGTTGCCTGCCTGGAGTGCAGTGGTGCGATCTCGG...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGACTGCCCAGTGGCTCTTaGAAGGCCCCTCACACTGGT +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRLPSGS*KAPHTG
Trigger: ACCAGTGTGAGGGGCCTTGCAAGAGCCACTGGGCAG...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGATGTGGCCTCCCCTTCTaGAAGGGGCTAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRCGLPF*KGLAGA
Trigger: AGCACCAGCTAGCCCCTTCCAGAAGGGGAGGCCACA...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAAGCTTCCCTGCCCTGTaGCCTCCCGAGACGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQSFPAL*PPETGS
Trigger: GCTTCCCGTCTCGGGAGGCCACAGGGCAGGGAAGCT...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCCTGGGCCATCAGGCTaGGGATGGGCGAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEPGPSG*GWASGA
Trigger: GGCCCCACTCGCCCATCCTCAGCCTGATGGCCCAGG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATGGAGTCTTTCTCACTaGTCCCCAGCTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALWSLSH*SPAPGP
Trigger: TGGCCCAGGAGCTGGGGATCAGTGAGAAAGACTCCA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAGGCAGGAGACTTGCTTaGACCCGGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALGRRLA*TREAEV
Trigger: AACTTCTGCCTCCCGGGTTCAAGCAAGTCTCCTGCC...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAGGGAGGTCCTCAAGGTaGCTGTGGCTCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQGRSSR*LWLPSQ
Trigger: CTGGGATGGGAGCCACAGGCACCTTGAGGACCTCCC...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAGCTTCCCTTTGCTGCTaGAGCCCCGTAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQASLCC*SPVGRP
Trigger: TGGCCTCCCTACGGGGCTGCAGCAGCAAAGGGAAGC...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTACCCAGCTCCAGCTGCTaGCACCAGGACAGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALPSSSC*HQDRLN
Trigger: GTTTAACCTGTCCTGGTGCCAGCAGCTGGAGCTGGG...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGACTGGGCATTCTGAGATaGGGGGCCCAAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRLGILR*GAQGSE
Trigger: CTCAGATCCTTGGGCCCCCCATCTCAGAATGCCCAG...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACCTGCCCAGAGGGCGTaGTGCCTCGCCAAGTGGACT +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSPAQRA*CLAKWT
Trigger: AGTCCACTTGGCGAGGCATCACGCCCTCTGGGCAGG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAGCTTCCCCATTGCTCTaGAGTTGCCCAGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALASPLL*SCPALL
Trigger: AAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGC...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACCACCTTCAACTGTGCTaGCCAGTGGCTCTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNHLQLC*PVALAR
Trigger: CCTTGCAAGAGCCACTGGGCAGCACAGTTGAAGGTG...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTATCCCTGAGGGGCCCTaGTCCCCTCACAGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSIPEGP*SPHSVP
Trigger: GGGGACACTGTGAGGGGACCAGGGCCCCTCAGGGAT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAAGTGGGGCCCCTGGTTaGAGACGCCTGTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSSGAPG*RRLSGC
Trigger: GCAACCAGACAGGCGTCTTCAACCAGGGGCCCCACT...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACCAGCATAAAATCCTCTaGAGGCCCCTTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNQHKIL*RPLQQE
Trigger: CTCCTGCTGAAGGGGCCTTCAGAGGATTTTATGCTG...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAAGCAGGGTGGCACCCTaGCCCGTGGCTCAGAACCTA +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRSRVAP*PVAQNL
Trigger: TAGGTTCTGAGCCACGGGTCAGGGTGCCACCCTGCT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTGACAGGTTAAACAGCTaGGCCAGTGAATCTGACCCT +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSDRLNS*ASESDP
Trigger: AGGGTCAGATTCACTGGCTCAGCTGTTTAACCTGTC...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAGAGGCTGCAGTGAGCTaGGATCATGTCGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQEAAVS*DHVAAL
Trigger: GAGTGCAGCGACATGATCTCAGCTCACTGCAGCCTC...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAGGTGGCCGAGTCCTGTaGGAGCAGCTAGGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRGGRVL*EQLGSK
Trigger: CTTCGAGCCTAGCTGCTCGCACAGGACTCGGCCACC...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTACCAGGCCCCACTCTTTaGCTCTGCATATATAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALPGPTL*LCIYSR
Trigger: CCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGG...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAGGGGAAATGATGACATaGACAAAGGCCTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRGEMMT*TKASRQ
Trigger: CTGCCTCGAGGCCTTTGTCCATGTCATCATTTCCCC...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp AGCGCTGCCAGAGAGAACAAGCTGACTTCCCTGTGCTaGCTCAATGACTGTCCCCAGACATCTGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SAARENKLTSLC*LNDCPQTSEDR
Trigger: CCTGTCCTCAGATGTCTGGGGACAGTCATTGAGCAAGCACAGGGAAGTCAGCTTGTTCTCTCTGGCAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp GGCTGGGCAGGGGATACAGATACCATCAAATTCATTTaGCCAATGAAGCTGCAGCACAGGGAGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GWAGDTDTIKFI*PMKLQHREGWA
Trigger: GGCCCACCCCTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCCTGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAACATATCCAAACCTCTTaGGCTGGCCAGTCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQHIQTS*AGQSVQ
Trigger: CTGCACCGACTGGCCAGCTCAAGAGGTTTGGATATG...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTTTACTTCCGAGTAACTaGTGGGTGCAGGATGTTCTG +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSLLPSN*WVQDVL
Trigger: CAGAACATCCTGCACCCATCAGTTACTCGGAAGTAA...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAAACCCAGAACCTCAGTaGCCCCCTCCAGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSNPEPQ*PPPEVA
Trigger: TGCCACCTCTGGAGGGGGTCACTGAGGTTCTGGGTT...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTTCGGTCCAAAGGGTCTaGTGGCTTTTATTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSSVQRV*WLLLCL
Trigger: GAGACACAATAAAAGCCAGCAGACCCTTTGGACCGA...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACCAGCTCTCTTCCAGCTaGTTCTTGTCCCCTTACTTC +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNQLSSS*FLSPYF
Trigger: GAAGTAAGGGGACAAGAAGCAGCTGGAAGAGAGCTG...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGCCCACCACACTGCCCTaGCTCCACTGCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHREPTTLP*LHCPVR
Trigger: CCTCACTGGGCAGTGGAGGCAGGGCAGTGTGGTGGG...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGGCTGGCTTCCCCATTaGTCTGCAGTTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSGWLPH*SAVAQL
Trigger: GAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACAAGGGCCCTGACTTGTaGTGTCAAGAAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNKGPDL*CQEASE
Trigger: TTCAGAGGCTTCTTGACAGCACAAGTCAGGGCCCTT...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCTGAGGATGGGCGAGTaGGGCCCCTGGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPELRMGE*GPWLKT
Trigger: CGTCTTCAACCAGGGGCCCCACTCGCCCATCCTCAG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAACTCAGACTGGGATCTaGAGATCCTTGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRTQTGI*RSLGLF
Trigger: GAAAAGGCCCAAGGATCTCCAGATCCCAGTCTGAGT...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAAGGCAGATCCTGACTTaGCAAGGTCAAAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRRQILT*QGQRGR
Trigger: TCTGCCTCTTTGACCTTGCCAAGTCAGGATCTGCCT...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGTCAGTGGTAGGGGGCTaGGTGTCGAGGGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPESVVGG*VSRGSG
Trigger: CCCAGATCCCCTCGACACCCAGCCCCCTACCACTGA...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATCTGATAACAACAGCTaGCAAGAGACAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALSDNNS*QETAQA
Trigger: AGCCTGGGCTGTCTCTTGCCAGCTGTTGTTATCAGA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAATGGGCACCCTGGCACTaGTCACTGGACTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQWAPWH*SLDLAL
Trigger: TAATGCCAAGTCCAGTGACCAGTGCCAGGGTGCCCA...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp GTCAGCAAATCTGAAGGGCTAACACTCAGATCTCACTaGTGCTCTGTCAGTGGTAGGGGGCTGGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: VSKSEGLTLRSH*CSVSGRGLGVE
Trigger: CTCGACACCCAGCCCCCTACCACTGACAGAGCACAAGTGAGATCTGAGTGTTAGCCCTTCAGATTTGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAACCAGAGAGAACAAGCTaGCTTCCCTGTGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQPERTS*LPCACS
Trigger: TGAGCAAGCACAGGGAAGTCAGCTTGTTCTCTCTGG...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACTTAAGAGGCAGATCCTaGCTTGGCAAGGTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNLRGRS*LGKVKE
Trigger: CTCTTTGACCTTGCCAAGTCAGGATCTGCCTCTTAA...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAGCCAGAAGGGGCAGATaGGGAGATAGTTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQARRGR*GDSSRP
Trigger: TGGTCTTGAACTATCTCCTCATCTGCCCCTTCTGGC...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAGAATTCTCACTAAAGCCCTTCCCTCCTCTGCTTGGGAGGGGCATGAGTGCTTGGCCAGCTTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ELEFSLKPFPPLLGRGMSAWPAW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCAAGCTGGCCAAGC...ACTCATGCCCCTCCCAAGCAGAGGAGGGAAGGGCTTTAGTGAGAATTCTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTACACCCAGCTCCAGCTaGTGGCACCAGGACAGGTTA +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSTPSSS*WHQDRL
Trigger: TAACCTGTCCTGGTGCCAGCAGCTGGAGCTGGGTGT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTAGGCTGGTCCCAAGTTaGCCAGGTCTTGCCACCACA +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSRLVPS*PGLATT
Trigger: TGTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGACATGGATTGGGCATGTaGTACGGGTCACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRHGLGM*YGSQKI
Trigger: TATCTTCTGTGACCCGTAGCACATGCCCAATCCATG...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACAGAGATCGCGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSQRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCGCGATCTCTG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACCAAACCTCTTGAGCTaGCCAGTCGGTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSPNLLS*PVGAGR
Trigger: CCTTCCTGCACCGACTGGCCAGCTCAAGAGGTTTGG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATTGAAGACGCCTGTCTaGTTGCAGAAACTGATACCC +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALLKTPV*LQKLIP
Trigger: GGGTATCAGTTTCTGCAACCAGACAGGCGTCTTCAA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGAGGGCGGAAGCCAGCTaGCCAGAGGTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHRERAEAS*PEVFSH
Trigger: GTGGCTGAAGACCTCTGGCCAGCTGGCTTCCGCCCT...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCTCTCTGCAGAGGGGCTaGGACCTGTGCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNASLQRG*DLCQAA
Trigger: AGCTGCCTGGCACAGGTCCCAGCCCCTCTGCAGAGA...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAGTCTTGCCACCACACTaGGCTGGCTTCCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRVLPPH*AGFPIA
Trigger: AGCAATGGGGAAGCCAGCCCAGTGTGGTGGCAAGAC...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAAAGGGGAGGAAGATGTaGGACTGGAATAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALKGRKM*DWNKEK
Trigger: CTTCTCCTTATTCCAGTCCCACATCTTCCTCCCCTT...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACATATCTACCATGGATTaGGCATGTGCTACGGGTCAC +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNISTMD*ACATGH
Trigger: GTGACCCGTAGCACATGCCCAATCCATGGTAGATAT...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAGGTGGTACCTTGCTCTaGCTAGCAGGAGGACAAGGG +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRGGTLL*LAGGQG
Trigger: CCCTTGTCCTCCTGCTAGCCAGAGCAAGGTACCACC...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp TGGGTATTTACTCCCAAAAATTCTGTAACGGGCCCCTaGAGTCCCTATGCTCAGGCCCTCTCCCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: WVFTPKNSVTGP*SPYAQALSHAV
Trigger: CACAGCATGGGAGAGGGCCTGAGCATAGGGACTCAAGGGGCCCGTTACAGAATTTTTGGGAGTAAATACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp CCACCACACTGGGCTGGCTTCCCCATTGCTCTGCAGTaGCCCAGCTCTGCTTCAAATTATACAAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: PPHWAGFPIALQ*PSSASNYTNPA
Trigger: AGCAGGATTTGTATAATTTGAAGCAGAGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCCAGTGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp CTCCCAGTGGACATCTGGCAATGTCTGGACACATTTTaGGTTGTCGTAACTGGGGGACTGCTACAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LPVDIWQCLDTF*VVVTGGLLQAP
Trigger: AGGTGCCTGTAGCAGTCCCCCAGTTACGACAACCAAAAATGTGTCCAGACATTGCCAGATGTCCACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTTCAGCAGGAGGCCCCTaGGAGAAAATCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSSAGGP*EKIQPS
Trigger: AGATGGCTGGATTTTCTCTCAGGGGCCTCCTGCTGA...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTAGTAAATACATGGGATaGACAAGGAACCGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSSKYMG*TRNRQR
Trigger: TCTCTGACGGTTCCTTGTTCATCCCATGTATTTACT...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGTTCAGTGCCAACAGCTaGTCCCGCCGCTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEFSANS*SRRFTS
Trigger: TGAGGTGAAGCGGCGGGAGCAGCTGTTGGCACTGAA...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTGCCAGGTTCTTCAGTaGCAACAGCTGCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHRECQVLQ*QQLLPP
Trigger: CGGCGGGAGCAGCTGTTGGCACTGAAGAACCTGGCA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACCTCCCCCAGCAGTCTaGACAGGGTCATATTTCCAG +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSPPPAV*TGSYFQ
Trigger: CTGGAAATATGACCCTGTGCAGACTGCTGGGGGAGG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAGGACAGGGATCATGTTaGTCCAAGGTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQGQGSC*SKVFLS
Trigger: GCTCAAGAAGACCTTGGAGCAACATGATCCCTGTCC...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATGGGATGGTTTTCTCTaGTCCTTTAAGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALWDGFL*SFKRQI
Trigger: GATCTGCCTCTTAAAGGAGCAGAGAAAACCATCCCA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAAGCTGGACAAACATGTaGCCTAGGGCCTTTACAGCT +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQSWTNM*PRAFTA
Trigger: AGCTGTAAAGGCCCTAGGGCACATGTTTGTCCAGCT...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGTGGCACACAGCACCTaGTCCCATAGTTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEVAHST*SHSSPL
Trigger: CAGTGGGGAACTATGGGAGCAGGTGCTGTGTGCCAC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCATGCCACCTTCAACTGTaGTGCCCAGTGGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSCHLQL*CPVALA
Trigger: TGCAAGAGCCACTGGGCAGCACAGTTGAAGGTGGCA...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCTGAGATCATGTCGCTaGACTCCAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSLRSCR*TPAWET
Trigger: TGTCTCCCAGGCTGGAGTGCAGCGACATGATCTCAG...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGTAGATCTCCAGGCTTaGGTCCAGGGAGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSVDLQA*VQGGPQ
Trigger: TTGAGGACCTCCCTGGACCCAAGCCTGGAGATCTAC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTTCTCTCAGGGCCTTCTaGAAAGGGTCAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSSLRAF*KGSVLG
Trigger: TCCCAGCACTGACCCTTTCCAGAAGGCCCTGAGAGA...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTGTCCCCACCAGCCTTaGTCGGTCCAAAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHRECPHQP*SVQRVC
Trigger: GCAGACCCTTTGGACCGACCAAGGCTGGTGGGGACA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTTGGGGCCCCTCCTGGTaGGGCAGAGGCATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGWGPSW*GRGILQ
Trigger: TTGGAGGATGCCTCTGCCCCACCAGGAGGGGCCCCA...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTCAGTCAGTAAATACATaGGATGAACAAGGAACCGTC +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSQSVNT*DEQGTV
Trigger: GACGGTTCCTTGTTCATCCCATGTATTTACTGACTG...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCACTGTTGCCACCACTaGGCACCCTGGCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAHCCHH*APWHWS
Trigger: TGACCAGTGCCAGGGTGCCCAGTGGTGGCAACAGTG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGATGGTGGAAGAAGGGTaGCTGGACCCGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEMVEEG*LDPNLR
Trigger: CCTGAGGTTCGGGTCCAGCCACCCTTCTTCCACCAT...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTGCACATCAGCAGCGGTaGGCACTGTCCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGAHQQR*ALSGSP
Trigger: AGGACTCCCGGACAGTGCTCACCGCTGCTGATGTGC...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCTGGGGTCACACAACCTaGGAAGGGCAGGGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAWGHTT*EGQGGD
Trigger: ATCTCCACCCTGCCCTTCTCAGGTTGTGTGACCCCA...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAAACCACTCTCTAGCATaGAAAGGACAGCGACTGGCC +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRNHSLA*KGQRLA
Trigger: GGCCAGTCGCTGTCCTTTTCATGCTAGAGAGTGGTT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGCAAACGGGGGCAGGTaGGGAAAGAAGAATCCGGAA +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEANGGR*GKKNPE
Trigger: TTCCGGATTCTTCTTTCCTCACCTGCCCCCGTTTGC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACCTGAGCTCTTCATCTaGAAAGAGATGGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSPELFI*KEMDSR
Trigger: CCGGCTGTCCATCTCTTTTCAGATGAAGAGCTCAGG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGACAAGGGCTGGCTCTaGGAGGTAGAACAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSDKGWL*EVEQLL
Trigger: CAAAAGCTGTTCTACCTCTCAGAGCCAGCCCTTGTC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGCCTCGCCAAGTGGACTaGAGGGGTACAACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHREPRQVD*RGTTEG
Trigger: GCCTTCAGTTGTACCCCTTCAGTCCACTTGGCGAGG...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTTGCAGGAAGGGCAGGTaGCCGAGTCCTGTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGCRKGR*PSPVRA
Trigger: TGCTCGCACAGGACTCGGCCACCTGCCCTTCCTGCA...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCATCCTCAAGGTGCCTGTaGCTCCCATCCCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSSSRCL*LPSQTK
Trigger: TTTTGTCTGGGATGGGAGCCACAGGCACCTTGAGGA...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAAGGATCTTGTACTGCTaGTGGATGTCGTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQRILYC*WMSFSC
Trigger: ACAGCTGAACGACATCCACCAGCAGTACAAGATCCT...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTTTACAGCTCAGGGGGTaGGCTCTGTCTGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSLQLRG*ALSAVR
Trigger: TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAA...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGGTTTTCCCTCCCAGTaGACATCTGGCAATGTCTGG +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSGFPSQ*TSGNVW
Trigger: CCAGACATTGCCAGATGTCCACTGGGAGGGAAAACC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTGGAAGAAGGGTGGCTaGACCCGAACCTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHREWKKGG*TRTSGS
Trigger: GCTTCCTGAGGTTCGGGTCCAGCCACCCTTCTTCCA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCAAGGCCCCTCACACTaGTGTGTGACTGGTACTCTG +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEQGPSH*CVTGTL
Trigger: CAGAGTACCAGTCACACACCAGTGTGAGGGGCCTTG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCTGTCCCCAGACATCTaGGGACAGGGATCATGTTGC +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNALSPDI*GQGSCC
Trigger: GCAACATGATCCCTGTCCTCAGATGTCTGGGGACAG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTTTGAAGGTGCCCATTTaGGGGCAGAAAGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSLKVPI*GQKGQD
Trigger: ATCCTGTCCTTTCTGCCCTCAAATGGGCACCTTCAA...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTTGGAAACATAAGCGATaGGAATTATCAGGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSWKHKR*ELSGSN
Trigger: GTTACTACCTGATAATTCTCATCGCTTATGTTTCCA...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAATGTACTCCACTGTTTaGCACAGAGATGGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQMYSTV*HRDGVR
Trigger: TCTAACCCCATCTCTGTGTCAAACAGTGGAGTACAT...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACCTGCTGTATTGCAATTaGAAAAATAAGGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNLLYCN*KNKDLA
Trigger: GGCCAGATCCTTATTTTTTCAATTGCAATACAGCAG...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGAAGCTGTCTGACCCATaGAGCTTAGGGCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEKLSDP*SLGQPL
Trigger: CAATGGCTGCCCTAAGCTGCATGGGTCAGACAGCTT...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCTCAGATCTCACTTGTaGTCTGTCAGTGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPELRSHL*SVSGRG
Trigger: CCCCCTACCACTGACAGAGCACAAGTGAGATCTGAG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTATCCTTCCTTGCTTTGTaGATTTTGCCCAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: PLPPPARLPQWYMQLVALSFLAL*ILPNSL
Trigger: CAAAGAATTGGGCAAAATGCACAAAGCAAGGAAGGA...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACCTAACAATCCCAGCTaGAAGAGGCAGCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSPNNPS*KRQLDK
Trigger: TTTGTCCAGCTGCCTCTTGCAGCTGGGATTGTTAGG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGGCTATAACTCAGACTaGGATCTGGAGATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSGYNSD*DLEILG
Trigger: CCCAAGGATCTCCAGATCCCAGTCTGAGTTATAGCC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGGGTGTCGAGGGGATCTaGGATGGTTTTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHREGVEGI*DGFLCS
Trigger: GGAGCAGAGAAAACCATCCCAGATCCCCTCGACACC...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGGCTGCAAGAGGCAGCTaGACAAACATGTGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHREAARGS*TNMCPR
Trigger: CCTAGGGCACATGTTTGTCCAGCTGCCTCTTGCAGC...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTAGGAAGCCTTCCAATTaGATTAACCAAAAGCATGTA +
Preference number: 4 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSRKPSN*INQKHV
Trigger: TACATGCTTTTGGTTAATCCAATTGGAAGGCTTCCT...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGAGAACTGCCGGAACCTaGGAGATAGAGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHRERTAGT*EIEAAV
Trigger: CACTGCAGCCTCTATCTCCCAGGTTCCGGCAGTTCT...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTAGACGGGAAGCTGTCTaGCCCATGCAGCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGRREAV*PMQLRA
Trigger: TGCCCTAAGCTGCATGGGTCAGACAGCTTCCCGTCT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAGAATTCTCACTAAAGCCCTTCCCTCCTCTGCTTGGGAGGGGCATGAGTTTCTATTTGTTTCTTTaGAGGTGCCCATTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELEFSLKPFPPLLGRGMSFYLFL*RCPFEG
Trigger: GCCCTCAAATGGGCACCTTCAAAGAAACAAATAGAA...ACTCATGCCCCTCCCAAGCAGAGGAGGGAAGGGCTTTAGTGAGAATTCTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTTGTCCAAGATCACACTaGAAACACCACTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSCPRSH*KHHCCH
Trigger: GTGGCAACAGTGGTGTTTTCAGTGTGATCTTGGACA...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGAACCTCAGGAAGCACTaGTATTTTCCCTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPENLRKH*YFPSGP
Trigger: AGGGCCAGAGGGAAAATATCAGTGCTTCCTGAGGTT...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAACACCAGTCTCACCCTaGAAGACACAGAAAACTAAA +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQTPVSP*KTQKTK
Trigger: TTTAGTTTTCTGTGTCTTTCAGGGTGAGACTGGTGT...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAATTGACAATATTTATTaGACATCTCTGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TCALGPLQLRGWALSAVRIDNIY*TSLWQG
Trigger: TCCCTGCCACAGAGATGTTCAATAAATATTGTCAAT...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTTCAAGGATCTTGTACTaGTGGTGGATGTCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSSRILY*WWMSFS
Trigger: GCTGAACGACATCCACCAGCAGTACAAGATCCTTGA...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTGAAGGGGCTAGCTGGTaGTCTCCACCACAACCACAC +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGEGASW*SPPQPH
Trigger: GTGTGGTTGTGGTGGAGAGCACCAGCTAGCCCCTTC...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGCGAGTAACTGATGGGTaGAGGATGTTCTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHRERVTDG*RMFWAL
Trigger: AAGGGCCCAGAACATCCTGCACCCATCAGTTACTCG...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGAAACAAATGGTTCCTaGCCTCTGAGAGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSETNGS*PLRASS
Trigger: ACTGGAAGCTCTCAGAGGGCAGGAACCATTTGTTTC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCGCACGACTCCCACAGTaGTATATGCAGTTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAARLPQ*YMQLVA
Trigger: CGCTACCAACTGCATATACCACTGTGGGAGTCGTGC...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAAACATCTGGCAATGTCTaGACACATTTTTGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQTSGNV*THFWLS
Trigger: CGACAACCAAAAATGTGTCCAGACATTGCCAGATGT...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGACTCCCAGTGGACATCTaGCAATGTCTGGACACATTT +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRLPVDI*QCLDTF
Trigger: AAATGTGTCCAGACATTGCCAGATGTCCACTGGGAG...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCTCATCTGAAAAGAGATaGACAGCCGGGCACGGTTGC +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNASSEKR*TAGHGC
Trigger: GCAACCGTGCCCGGCTGTCCATCTCTTTTCAGATGA...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTAGGAAGGCCAGGAATTaGAGAAGGTCCATATCCAAA +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSRKARN*RRSISK
Trigger: TTTGGATATGGACCTTCTTCAATTCCTGGCCTTCCT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGAGTCAGCTCAGACTTaGCAGCAGAGAACTACAACA +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEESAQT*QQRTTT
Trigger: TGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGCTGAAGGGGTACAACTaGAGGCTCAGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPELKGYN*RLSRNG
Trigger: ACCATTTCTACTGAGCCTTCAGTTGTACCCCTTCAG...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCGATGTCGTTCAGCTGTaGCAGGTTCTTCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNADVVQL*QVLQCQ
Trigger: TTGGCACTGAAGAACCTGGCACAGCTGAACGACATC...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCAAGCTGACTTCCCTGTaGTTGCTCAATGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAKLTSL*LLNDCP
Trigger: GGGACAGTCATTGAGCAAGCACAGGGAAGTCAGCTT...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTGGGGTGGGCTCTGTCTaGAGTAAGACTCAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGGVGSV*SKTQQV
Trigger: CACTTGCTGAGTCTTACTGCAGACAGAGCCCACCCC...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCTGGGAGATAGAGGCTaGAGTGAGCTGAGATCATGT +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNALGDRG*SELRSC
Trigger: ACATGATCTCAGCTCACTGCAGCCTCTATCTCCCAG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAATTGGCATACAGTAAGTaGCTTGCATACTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQLAYSK*LAYCCI
Trigger: AATACAGCAGTATGCAAGGCACTTACTGTATGCCAA...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCGGATCTGGAGATCCTTaGGCCTTTTCGGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAGSGDP*AFSDLL
Trigger: AAGGAGATCCGAAAAGGCCCAAGGATCTCCAGATCC...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGGAAGACCCAACAGCTaGCTGTCAGACATAGTTACA +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEGRPNS*LSDIVT
Trigger: TGTAACTATGTCTGACAGCCAGCTGTTGGGTCTTCC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTGGATCCCATGTAACTaGACATCTCTTCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHREWIPCN*TSLPGG
Trigger: ACCACCTGGAAGAGATGTTCAGTTACATGGGATCCA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAATCTGTGTGCTCACCTaGAGGTTAAAAACGATGGAA +
Preference number: 4 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRICVLT*RLKTME
Trigger: TTCCATCGTTTTTAACCTTCAGGTGAGCACACAGAT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTGGTGTGCAGATCATTTaGGGTCAGGAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGGVQII*GQELET
Trigger: GGTCTCCAACTCCTGACCTCAAATGATCTGCACACC...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTACTGTCTTCCAGCGCTaGCAGAGAGAACAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGTVFQR*QREQAD
Trigger: GTCAGCTTGTTCTCTCTGGCAGCGCTGGAAGACAGT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCCCACTCTTTGGCTCTaGATATATAGCAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAPTLWL*IYSRQS
Trigger: TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGCGGTCGATTTTAAATaGGTTCTGGAAGTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: EERVSSDLTAENYNNKPEAVDFK*VLEVGV
Trigger: GACTCCAACTTCCAGAACCCATTTAAAATCGACCGC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAAAGACATCAAGAACCTaGACACCCTCCACTGTTAAT +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSKTSRT*TPSTVN
Trigger: ATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTT...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCACACACAGGGAGGCTaGTATAGAATACACCAGTCT +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAHTQGG*YRIHQS
Trigger: AGACTGGTGTATTCTATACCAGCCTCCCTGTGTGTG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTCTTTTATTGTGTCTCTaGAGAGGGGCTGGGACCTGT +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGLLLCL*RGAGTC
Trigger: ACAGGTCCCAGCCCCTCTGCAGAGACACAATAAAAG...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTATCTTGTACTGCTGGTaGATGTCGTTCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGILYCW*MSFSCA
Trigger: GGCACAGCTGAACGACATCCACCAGCAGTACAAGAT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTAACATCTCTTCCAGGTaGTACCTTGCTCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGNISSR*YLALAS
Trigger: GCTAGCCAGAGCAAGGTACCACCTGGAAGAGATGTT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTAATTCATTTTGCCAATaGAGCTGCAGCACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGNSFCQ*SCSTGR
Trigger: CCTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTCTACAACAACAAGCCTaGGAGAATCACCTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGLQQQA*ENHLKE
Trigger: CTCCTTGAGGTGATTCTCTCAGGCTTGTTGTTGTAG...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTTCATTTACTTCCTCTaGCACTTTCCCCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHREFIYFL*HFPLFP
Trigger: GGGAAAAAGGGGAAAGTGTCAGAGGAAGTAAATGAA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR TCA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTATAAAAGGGAAAAGTTaGAGTTTCCTGCCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSIKGKS*SFLPVC
Trigger: ACAAACTGGCAGGAAACTTCAACTTTTCCCTTTTAT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGAGGGATGGATTAGACTaGGTAACCACTATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHRERDGLD*VTTMFR
Trigger: TCGAAACATAGTGGTTACCCAGTCTAATCCATCCCT...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTCTGATATTTTCCCTCTaGCCCTGGATCCCATGTAAC +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGLIFSL*PWIPCN
Trigger: GTTACATGGGATCCAGGGCCAGAGGGAAAATATCAG...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp GGTAATGGATGTGATGAAACTAACAAGGGCCCTGACTaGTGCTGTCAAGAAGCCTCTGAAGAAGTGACATTT +
Preference number: 4 (lower is better)
Translates to: GNGCDETNKGPD*CCQEASEEVTF
Trigger: AAATGTCACTTCTTCAGAGGCTTCTTGACAGCACAAGTCAGGGCCCTTGTTAGTTTCATCACATCCATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAATTTTAAATGGGTTCTaGAAGTTGGAGTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSILNGF*KLESFS
Trigger: TGAGAAAGACTCCAACTTCCAGAACCCATTTAAAAT...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTTGCTTTGTGCATTTTaGCCAATTCTTTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GDTDTIKFILPMKLQHRELLCAF*PILCSR
Trigger: TCTTGAACAAAGAATTGGGCAAAATGCACAAAGCAA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR GCA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCAAGTGCCTTGCATACTaGTGTATTGCAATTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAKCLAY*CIAIEK
Trigger: TTTTTCAATTGCAATACAGCAGTATGCAAGGCACTT...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CCA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTAAGAAAGAAAAGGGATaGATTAGACTGGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGKKEKG*IRLGNH
Trigger: GTGGTTACCCAGTCTAATCCATCCCTTTTCTTTCTT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp GGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTaGTATATGGTTTTTCATTTACTTCCTCTGACACTT +
Preference number: 4 (lower is better)
Translates to: GLGMCYGSQKII*YMVFHLLPLTL
Trigger: AAGTGTCAGAGGAAGTAAATGAAAAACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
3UTR CAA 72 bp TTCATTCTCAGTAAAACCCTTCATTCCTTCCTTGCTTaGTGCATTTTGCCCAATTCTTTGTTCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: FILSKTLHSFLA*CILPNSLFKTS
Trigger: TGATGTCTTGAACAAAGAATTGGGCAAAATGCACAAAGCAAGGAAGGAATGAAGGGTTTTACTGAGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CCA 90 bp GGAGAAAGCATCCTTCAGCTTCTCGTCCTGGGGGAAGGGCCCATCTaGGAGCACATCAGCAGCGGTGAGCACTGTCCGGGAGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GESILQLLVLGEGPI*EHISSGEHCPGVLQ
Trigger: CTGGAGGACTCCCGGACAGTGCTCACCGCTGCTGATGTGCTCCCAGATGGGCCCTTCCCCCAGGACGAGAAGCTGAAGGATGCTTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp AGGCATCCTCCAAGCTGTTTCTACATCCCTGAGGGGCCCTGGTCCCCTCACAGTAGCTTAGGGCAGCCATaGCGGAGCACGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RHPPSCFYIPEGPWSPHSSLGQP*RSTASC
Trigger: GCAGGAGGCCGTGCTCCGCAATGGCTGCCCTAAGCT...ACTGTGAGGGGACCAGGGCCCCTCAGGGATGTAGAAACAGCTTGGAGGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS GCA 90 bp TTGAGCTGGCCAGTCGGTGCAGGAAGGGCAGGTGGCCGAGTCCTGTaGGAGCAGCTAGGCTCGAAGGTCCAACAGGCTAACAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LSWPVGAGRAGGRVL*EQLGSKVQQANSKA
Trigger: TGCTTTGCTGTTAGCCTGTTGGACCTTCGAGCCTAGCTGCTCGCACAGGACTCGGCCACCTGCCCTTCCTGCACCGACTGGCCAGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 90 bp ATATCCAAACCTCTTGAGCTGGCCAGTCGGTGCAGGAAGGGCAGGTaGCCGAGTCCTGTGCGAGCAGCTAGGCTCGAAGGTCCAACAGGC +
Preference number: 5 (lower is better)
Translates to: ISKPLELASRCRKGR*PSPVRAARLEGPTG
Trigger: GCCTGTTGGACCTTCGAGCCTAGCTGCTCGCACAGGACTCGGCCACCTGCCCTTCCTGCACCGACTGGCCAGCTCAAGAGGTTTGGATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 90 bp TGTAGATCTCCAGGCTTGGGTCCAGGGAGGTCCTCAAGGTGCCTGTaGCTCCCATCCCAGACAAAAGCAGGACAAAGAGGAAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: CRSPGLGPGRSSRCL*LPSQTKAGQRGRPG
Trigger: TCCTGGCCTTCCTCTTTGTCCTGCTTTTGTCTGGGATGGGAGCCACAGGCACCTTGAGGACCTCCCTGGACCCAAGCCTGGAGATCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS-3UTR CAA 90 bp GAGCTAGAATTCTCACTAAAGCCCTTCCCTCCTCTGCTTGGGAGGGGCATGAGTGGGCTGGCTTCCCCATaGCTCTGCAGTTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: ELEFSLKPFPPLLGRGMSGLASP*LCSCPA
Trigger: AGCTGGGCAACTGCAGAGCAATGGGGAAGCCAGCCC...ACTCATGCCCCTCCCAAGCAGAGGAGGGAAGGGCTTTAGTGAGAATTCTAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAGCTAGAATTCTCACTAAAGCCCTTCCCTCCTCTGCTTGGGAGGGGCATGAGTCAGGCTGGTCCCAAGTaGCCCAGGTCTTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: ELEFSLKPFPPLLGRGMSQAGPK*PRSCHH
Trigger: GTGGTGGCAAGACCTGGGCAACTTGGGACCAGCCTG...ACTCATGCCCCTCCCAAGCAGAGGAGGGAAGGGCTTTAGTGAGAATTCTAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS GCA 90 bp TCTTCTTGTAGATCTCCAGGCTTGGGTCCAGGGAGGTCCTCAAGGTaGCTGTGGCTCCCATCCCAGACAAAAGCAGGACAAAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SSCRSPGLGPGRSSR*LWLPSQTKAGQRGR
Trigger: CCTTCCTCTTTGTCCTGCTTTTGTCTGGGATGGGAGCCACAGGCACCTTGAGGACCTCCCTGGACCCAAGCCTGGAGATCTACAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS GCA 90 bp CATGACATCAAGGATCTTGTACTGCTGGTGGATGTCGTTCAGCTGTaGCAGGTTCTTCAGTGCCAACAGCTGCTCCCGCCGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: HDIKDLVLLVDVVQL*QVLQCQQLLPPLHL
Trigger: GAGGTGAAGCGGCGGGAGCAGCTGTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS-3UTR CAA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAGTCTGCTGGCTTTTATaGTGTCTCTGCAGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: PLPPPARLPQWYMQLVALVCWLL*CLCRGA
Trigger: AGCCCCTCTGCAGAGACACAATAAAAGCCAGCAGAC...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAAGAGAGAGTCAGCTCAGACTTGACAGCAGAGAACTACAACAACAAGCCTGAGGTGTCCCCACCAGCCTaGGTCGGTCCAAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: EERVSSDLTAENYNNKPEVSPPA*VGPKGL
Trigger: CAGACCCTTTGGACCGACCAAGGCTGGTGGGGACAC...CTCAGGCTTGTTGTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCTCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAACACTCAGATCTCACTaGTGCTCTGTCAGTGGTAGG +
Preference number: 5 (lower is better)
Translates to: PLPPPARLPQWYMQLVALTLRSH*CSVSGR
Trigger: CCTACCACTGACAGAGCACAAGTGAGATCTGAGTGT...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCGCTGCCCAGTGGCTCTaGCAAGGCCCCTCACACTGG +
Preference number: 5 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAAAQWL*QGPSHW
Trigger: CCAGTGTGAGGGGCCTTGCAAGAGCCACTGGGCAGC...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGGCTGAGGTGGGCGGATaGCCTGAGGTCGGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: GDTDTIKFILPMKLQHREAEVGG*PEVGSS
Trigger: CGAACTCCCGACCTCAGGCAATCCGCCCACCTCAGC...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS GCA 90 bp CTTGTACTGCTGGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGTaGCAACAGCTGCTCCCGCCGCTTCACCTCAAACATCTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: LVLLVDVVQLCQVLQ*QQLLPPLHLKHLLV
Trigger: TACAAGAAGATGTTTGAGGTGAAGCGGCGGGAGCAGCTGTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS-3UTR CAA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCTGAAAACACCACTGTaGCCACCACTGGGCACCCTG +
Preference number: 5 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSLKTPL*PPLGTL
Trigger: CAGGGTGCCCAGTGGTGGCAACAGTGGTGTTTTCAG...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCACTTCCAGGTGGTACCTaGCTCTGGCTAGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSLPGGT*LWLAGG
Trigger: TCCTCCTGCTAGCCAGAGCAAGGTACCACCTGGAAG...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTGAGGCAGATCCTGACTaGGCAAGGTCAAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSEADPD*ARSKRQ
Trigger: CTGCCTCTTTGACCTTGCCAAGTCAGGATCTGCCTC...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACATGAAACTATGTCTGTaGAGTCAGTCCCACCACACT +
Preference number: 5 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNMKLCL*SQSHHT
Trigger: AGTGTGGTGGGACTGACTCAACAGACATAGTTTCAT...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCACTACCGCCACCAGCACGACTCCCACAGTGGTATATGCAGTTGGTAGCGCTAGAGGTAGAACAGCTTTaGACAAGTCACTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: PLPPPARLPQWYMQLVALEVEQL*TSHSSE
Trigger: TTCTGAGGAGTGACTTGTCAAAAGCTGTTCTACCTC...TAGCGCTACCAACTGCATATACCACTGTGGGAGTCGTGCTGGTGGCGGTAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS GCA 90 bp AGCACCTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTTGTACTaGTGGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: STLKSPLSMTSRILY*WWMSFSCARFFSAN
Trigger: GTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CCA 90 bp TTAAAGAGCCCCTTGAGCATGACATCAAGGATCTTGTACTGCTGGTaGATGTCGTTCAGCTGTGCCAGGTTCTTCAGTGCCAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LKSPLSMTSRILYCW*MSFSCARFFSANSC
Trigger: GCAGCTGTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 90 bp ACCTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTTGTACTGCTaGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGTGCCAACAGC +
Preference number: 5 (lower is better)
Translates to: TLKSPLSMTSRILYC*WMSFSCARFFSANS
Trigger: GCTGTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CCA 90 bp TCAGTGCTGGGAATGAACTCTGTGCGGTCGATTTTAAATGGGTTCTaGAAGTTGGAGTCTTTCTCACTGATCCCCAGCTCCTGGGCCATC +
Preference number: 5 (lower is better)
Translates to: SVLGMNSVRSILNGF*KLESFSLIPSSWAI
Trigger: GATGGCCCAGGAGCTGGGGATCAGTGAGAAAGACTCCAACTTCCAGAACCCATTTAAAATCGACCGCACAGAGTTCATTCCCAGCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAGCTAGAATTCTCACTAAAGCCCTTCCCTCCTCTGCTTGGGAGGGGCATGAGTATGACATCAAGGATCTaGTACTGCTGGTGGATGTCG +
Preference number: 5 (lower is better)
Translates to: ELEFSLKPFPPLLGRGMSMTSRI*YCWWMS
Trigger: CGACATCCACCAGCAGTACAAGATCCTTGATGTCAT...ACTCATGCCCCTCCCAAGCAGAGGAGGGAAGGGCTTTAGTGAGAATTCTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAGCTAGAATTCTCACTAAAGCCCTTCCCTCCTCTGCTTGGGAGGGGCATGAGTCCCTTCATTCCTTCCTaGCTTTGTGCATTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: ELEFSLKPFPPLLGRGMSPFIPS*LCAFCP
Trigger: TGGGCAAAATGCACAAAGCAAGGAAGGAATGAAGGG...ACTCATGCCCCTCCCAAGCAGAGGAGGGAAGGGCTTTAGTGAGAATTCTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CCA 90 bp AACTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTTGTACTGCTaGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGTGCCAACAGC +
Preference number: 5 (lower is better)
Translates to: NLKSPLSMTSRILYC*WMSFSCARFFSANS
Trigger: GCTGTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402061.7
CDS-3UTR CAA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCCATATCCAAACCTCTaGAGCTGGCCAGTCGGTGCA +
Preference number: 5 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAPYPNL*SWPVGA
Trigger: TGCACCGACTGGCCAGCTCAAGAGGTTTGGATATGG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCACTGGTCACTGGACTaGGCATTAGAGCCACCCCTT +
Preference number: 5 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAHWSLD*ALEPPL
Trigger: AAGGGGTGGCTCTAATGCCAAGTCCAGTGACCAGTG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp ACATGTGCCCTAGGGCCTTTACAGCTCAGGGGGTGGGCTCTGTCTGCAGTAAGAGAAAGCAAGACAACATaGTTCTCGTCATTGTTCACA +
Preference number: 5 (lower is better)
Translates to: TCALGPLQLRGWALSAVRESKTT*FSSLFT
Trigger: TGTGAACAATGACGAGAACAATGTTGTCTTGCTTTC...TCTTACTGCAGACAGAGCCCACCCCCTGAGCTGTAAAGGCCCTAGGGCACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAAGGTGTGCAGATCATTaGAGGTCAGGAGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRRCADH*RSGVGD
Trigger: GTCTCCAACTCCTGACCTCAAATGATCTGCACACCT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GACCAGCCCTTTAGTTCACAGACTCGGGTGTCCATGTGGCTGGGGTCACACAACGATAAAAGGGAAAAGTaGAAGTTTCCTGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: DQPFSSQTRVSMWLGSHNDKREK*KFPASL
Trigger: CAAACTGGCAGGAAACTTCAACTTTTCCCTTTTATC...GTTGTGTGACCCCAGCCACATGGACACCCGAGTCTGTGAACTAAAGGGCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS GCA 90 bp ATGAACTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTTGTACTaGTGGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: MNLKSPLSMTSRILY*WWMSFSCARFFSAN
Trigger: GTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402061.7
CDS-3UTR CAA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAGAGGAAGGCCAGGAATaGAAGAAGGTCCATATCCAA +
Preference number: 5 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSEEGQE*KKVHIQ
Trigger: TTGGATATGGACCTTCTTCAATTCCTGGCCTTCCTC...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTCAACCTTAAAGAGCCCCTaGAGCATGACATCAAGGATC +
Preference number: 5 (lower is better)
Translates to: DSSRPGPTLWLCIYSRQSTLKSP*SMTSRI
Trigger: GATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGGT...TGACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCCCAACACCAATCATTaGTCAAGGGCAGTGATGGCG +
Preference number: 5 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAPNTNH*SRAVMA
Trigger: CGCCATCACTGCCCTTGACAAATGATTGGTGTTGGG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAAGGATCTGAGTGTGAAGAGCCTGGTTCTGATAACAACAGCTGGCAAGAGAACATTGTTCTCGTCATaGTTCACACACAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PKDLSVKSLVLITTAGKRTLFSS*FTHREA
Trigger: AGCCTCCCTGTGTGTGAACAATGACGAGAACAATGT...TCTCTTGCCAGCTGTTGTTATCAGAACCAGGCTCTTCACACTCAGATCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTACCAGCTTGGCCAGCTaGGTGAAACCCCGTCTCTAC +
Preference number: 5 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGTSLAS*VKPRLY
Trigger: GTAGAGACGGGGTTTCACCAAGCTGGCCAAGCTGGT...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAACATACAGTAAGTGCCTaGCATACTGCTGTATTGCAA +
Preference number: 5 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQHTVSA*HTAVLQ
Trigger: TTGCAATACAGCAGTATGCAAGGCACTTACTGTATG...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTGGGATCTGGAGATCCTaGGGCCTTTTCGGATCTCCT +
Preference number: 5 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGGIWRS*GLFGSP
Trigger: AGGAGATCCGAAAAGGCCCAAGGATCTCCAGATCCC...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGAGGACAGGGATCATGTaGCTCCAAGGTCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: GDTDTIKFILPMKLQHRERTGIM*LQGLLE
Trigger: CTCAAGAAGACCTTGGAGCAACATGATCCCTGTCCT...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAGCTAAATGTTTCCCAGGTCCCAGGGCACTTCCAGGTCCTTTCCCAACACCAACTTGCTTTGTGCATTTaGCCCAATTCTTTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: ELNVSQVPGHFQVLSQHQLALCI*PNSLFK
Trigger: CTTGAACAAAGAATTGGGCAAAATGCACAAAGCAAG...TTGGTGTTGGGAAAGGACCTGGAAGTGCCCTGGGACCTGGGAAACATTTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGTTTGAAGGTGCCCATTaGAGGGCAGAAAGGACAGGA +
Preference number: 5 (lower is better)
Translates to: GDTDTIKFILPMKLQHREFEGAH*RAERTG
Trigger: TCCTGTCCTTTCTGCCCTCAAATGGGCACCTTCAAA...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCGATATCTACCATGGATaGGGCATGTGCTACGGGTCA +
Preference number: 5 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNADIYHG*GMCYGS
Trigger: TGACCCGTAGCACATGCCCAATCCATGGTAGATATC...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCAGAGTCAGCTCAGACTaGACAGCAGAGAACTACAAC +
Preference number: 5 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNARVSSD*TAENYN
Trigger: GTTGTAGTTCTCTGCTGTCAAGTCTGAGCTGACTCT...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGAATGGGTTCTGGAAGTaGGAGTCTTTCTCACTGATC +
Preference number: 5 (lower is better)
Translates to: GDTDTIKFILPMKLQHRENGFWK*ESFSLI
Trigger: GATCAGTGAGAAAGACTCCAACTTCCAGAACCCATT...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GGGGATACAGATACCATCAAATTCATTTTGCCAATGAAGCTGCAGCACAGGGAGACCATCAAATTCATTTaGCCAATGAAGCTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GDTDTIKFILPMKLQHRETIKFI*PMKLQH
Trigger: GTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGT...CTCCCTGTGCTGCAGCTTCATTGGCAAAATGAATTTGATGGTATCTGTATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp GAGATAGTTCAAGACCAGGCCCCACTCTTTGGCTCTGCATATATAGCAGGCAGTATTTTGCCCAATTCTTaGTTCAAGACATCAAGAACC +
Preference number: 5 (lower is better)
Translates to: EIVQDQAPLFGSAYIAGSILPNS*FKTSRT
Trigger: GGTTCTTGATGTCTTGAACAAAGAATTGGGCAAAAT...ACTGCCTGCTATATATGCAGAGCCAAAGAGTGGGGCCTGGTCTTGAACTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CCCAATTCTTTGTTCAAGACATCAAGAACCTGGACACCCTCCACTGTTAATGCCCATTCCTTCCTTGCTTaGTGCATTTTGCCCAATTCT +
Preference number: 5 (lower is better)
Translates to: PNSLFKTSRTWTPSTVNAHSFLA*CILPNS
Trigger: AGAATTGGGCAAAATGCACAAAGCAAGGAAGGAATG...GGCATTAACAGTGGAGGGTGTCCAGGTTCTTGATGTCTTGAACAAAGAATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS-3UTR CAA 90 bp CTACCATGGATTGGGCATGTGCTACGGGTCACAGAAGATAATTTTGTATATGGTTGTCTGGACACATTTTaGGTTGTCGTAACTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LPWIGHVLRVTEDNFVYGCLDTF*VVVTGG
Trigger: TCCCCCAGTTACGACAACCAAAAATGTGTCCAGACA...ACCATATACAAAATTATCTTCTGTGACCCGTAGCACATGCCCAATCCATGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CCA 72 bp CCTCTTGAGCTGGCCAGTCGGTGCAGGAAGGGCAGGTaGCCGAGTCCTGTGCGAGCAGCTAGGCTCGAAGGT +
Preference number: 6 (lower is better)
Translates to: PLELASRCRKGR*PSPVRAARLEG
Trigger: ACCTTCGAGCCTAGCTGCTCGCACAGGACTCGGCCACCTGCCCTTCCTGCACCGACTGGCCAGCTCAAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS GCA 72 bp CCAGTCGGTGCAGGAAGGGCAGGTGGCCGAGTCCTGTaGGAGCAGCTAGGCTCGAAGGTCCAACAGGCTAAC +
Preference number: 6 (lower is better)
Translates to: PVGAGRAGGRVL*EQLGSKVQQAN
Trigger: GTTAGCCTGTTGGACCTTCGAGCCTAGCTGCTCGCACAGGACTCGGCCACCTGCCCTTCCTGCACCGACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 72 bp ACCACGTGGGAGAAAGCATCCTTCAGCTTCTCGTCCTaGGGGAAGGGCCCATCTGGGAGCACATCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: TTWEKASFSFSS*GKGPSGSTSAA
Trigger: CGCTGCTGATGTGCTCCCAGATGGGCCCTTCCCCCAGGACGAGAAGCTGAAGGATGCTTTCTCCCACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CAA 72 bp GCCATCAGGCTGAGGATGGGCGAGTGGGGCCCCTGGTaGAAGACGCCTGTCTGGTTGCAGAAACTGATACCC +
Preference number: 6 (lower is better)
Translates to: AIRLRMGEWGPW*KTPVWLQKLIP
Trigger: GGGTATCAGTTTCTGCAACCAGACAGGCGTCTTCAACCAGGGGCCCCACTCGCCCATCCTCAGCCTGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CCA 72 bp CCAGGCTTGGGTCCAGGGAGGTCCTCAAGGTGCCTGTaGCTCCCATCCCAGACAAAAGCAGGACAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: PGLGPGRSSRCL*LPSQTKAGQRG
Trigger: TCCTCTTTGTCCTGCTTTTGTCTGGGATGGGAGCCACAGGCACCTTGAGGACCTCCCTGGACCCAAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 72 bp TGGGCCATCAGGCTGAGGATGGGCGAGTGGGGCCCCTaGTTGAAGACGCCTGTCTGGTTGCAGAAACTGATA +
Preference number: 6 (lower is better)
Translates to: WAIRLRMGEWGP*LKTPVWLQKLI
Trigger: TATCAGTTTCTGCAACCAGACAGGCGTCTTCAACCAGGGGCCCCACTCGCCCATCCTCAGCCTGATGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS GCA 72 bp AGATCTCCAGGCTTGGGTCCAGGGAGGTCCTCAAGGTaGCTGTGGCTCCCATCCCAGACAAAAGCAGGACAA +
Preference number: 6 (lower is better)
Translates to: RSPGLGPGRSSR*LWLPSQTKAGQ
Trigger: TTGTCCTGCTTTTGTCTGGGATGGGAGCCACAGGCACCTTGAGGACCTCCCTGGACCCAAGCCTGGAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS GCA 72 bp AAGGATCTTGTACTGCTGGTGGATGTCGTTCAGCTGTaGCAGGTTCTTCAGTGCCAACAGCTGCTCCCGCCG +
Preference number: 6 (lower is better)
Translates to: KDLVLLVDVVQL*QVLQCQQLLPP
Trigger: CGGCGGGAGCAGCTGTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 72 bp CTGAGCCCTGAGCTGCTCCAGGGCTATAACTCAGACTaGGATCTGGAGATCCTTGGGCCTTTTCGGATCTCC +
Preference number: 6 (lower is better)
Translates to: LSPELLQGYNSD*DLEILGPFRIS
Trigger: GGAGATCCGAAAAGGCCCAAGGATCTCCAGATCCCAGTCTGAGTTATAGCCCTGGAGCAGCTCAGGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 72 bp CTTCACCTCAAACATCTTCTTGTAGATCTCCAGGCTTaGGTCCAGGGAGGTCCTCAAGGTGCCTGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: LHLKHLLVDLQA*VQGGPQGACGS
Trigger: GGAGCCACAGGCACCTTGAGGACCTCCCTGGACCCAAGCCTGGAGATCTACAAGAAGATGTTTGAGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CAA 90 bp CTGAGCTGCTCCAGGGCTATAACTCAGACTGGGATCTGGAGATCCTaGGGCCTTTTCGGATCTCCTTCCGCTTCTCCTCTTTCTTTCGGC +
Preference number: 6 (lower is better)
Translates to: LSCSRAITQTGIWRS*GLFGSPSASPLSFG
Trigger: GCCGAAAGAAAGAGGAGAAGCGGAAGGAGATCCGAAAAGGCCCAAGGATCTCCAGATCCCAGTCTGAGTTATAGCCCTGGAGCAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 72 bp CCCTTGAGCATGACATCAAGGATCTTGTACTGCTGGTaGATGTCGTTCAGCTGTGCCAGGTTCTTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PLSMTSRILYCW*MSFSCARFFSA
Trigger: GGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 72 bp TTCTTTCGGCGTTTCTCTTCTTCTCTCAGGGCCTTCTaGAAAGGGTCAGTGCTGGGAATGAACTCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: FFRRFSSSLRAF*KGSVLGMNSVR
Trigger: CCGCACAGAGTTCATTCCCAGCACTGACCCTTTCCAGAAGGCCCTGAGAGAAGAAGAGAAACGCCGAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CAA 72 bp TCCAGGGCTATAACTCAGACTGGGATCTGGAGATCCTaGGGCCTTTTCGGATCTCCTTCCGCTTCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SRAITQTGIWRS*GLFGSPSASPL
Trigger: AAGAGGAGAAGCGGAAGGAGATCCGAAAAGGCCCAAGGATCTCCAGATCCCAGTCTGAGTTATAGCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CAA 90 bp CTGGGAATGAACTCTGTGCGGTCGATTTTAAATGGGTTCTGGAAGTaGGAGTCTTTCTCACTGATCCCCAGCTCCTGGGCCATCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LGMNSVRSILNGFWK*ESFSLIPSSWAIRL
Trigger: CAGCCTGATGGCCCAGGAGCTGGGGATCAGTGAGAAAGACTCCAACTTCCAGAACCCATTTAAAATCGACCGCACAGAGTTCATTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CAA 90 bp TCCTCCAGCACCTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTaGTACTGCTGGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: SSSTLKSPLSMTSRI*YCWWMSFSCARFFS
Trigger: ACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGGTGCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS GCA 72 bp AAGAGCCCCTTGAGCATGACATCAAGGATCTTGTACTaGTGGTGGATGTCGTTCAGCTGTGCCAGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: KSPLSMTSRILY*WWMSFSCARFF
Trigger: GAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CCA 72 bp AGCCCCTTGAGCATGACATCAAGGATCTTGTACTGCTaGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: SPLSMTSRILYC*WMSFSCARFFS
Trigger: ACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255784.6
ENST00000402061.7
CDS CAA 72 bp ACCTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTaGTACTGCTGGTGGATGTCGTTCAGCTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: TLKSPLSMTSRI*YCWWMSFSCAR
Trigger: CCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CAA 72 bp AACTCTGTGCGGTCGATTTTAAATGGGTTCTGGAAGTaGGAGTCTTTCTCACTGATCCCCAGCTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: NSVRSILNGFWK*ESFSLIPSSWA
Trigger: GGCCCAGGAGCTGGGGATCAGTGAGAAAGACTCCAACTTCCAGAACCCATTTAAAATCGACCGCACAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6
CDS CAA 72 bp AACTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTaGTACTGCTGGTGGATGTCGTTCAGCTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: NLKSPLSMTSRI*YCWWMSFSCAR
Trigger: CCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402061.7
CDS CAA 90 bp CTGGGAATGAACTTAAAGAGCCCCTTGAGCATGACATCAAGGATCTaGTACTGCTGGTGGATGTCGTTCAGCTGTGCCAGGTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LGMNLKSPLSMTSRI*YCWWMSFSCARFFS
Trigger: ACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTCAAGGGGCTCTTTAAGTTCATTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402061.7
CDS CCA 72 bp GGAATGAACTCTGTGCGGTCGATTTTAAATGGGTTCTaGAAGTTGGAGTCTTTCTCACTGATCCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GMNSVRSILNGF*KLESFSLIPSS
Trigger: GGAGCTGGGGATCAGTGAGAAAGACTCCAACTTCCAGAACCCATTTAAAATCGACCGCACAGAGTTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255784.6