RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC13 (Homo sapiens)

Ensembl gene IDs: ENSG00000244607

Ensembl transcript IDs: ENST00000310232.11, ENST00000435327.2, ENST00000466031.5, ENST00000472921.1, ENST00000479576.5, ENST00000482100.1, ENST00000492806.5

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCTGTCCATTCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTaGCAGTGGGCTGCTGGGCCTCCCTGCTGCTGTAACCCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: ICPFTAALPSQSSRL*QWAAGPPCCCNPAS
Trigger: GCTGGCTGGGTTACAGCAGCAGGGAGGCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGAATGGACAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp CCTCCCAGGCCTGGAGAGGCTGGCATGCTGTTGGCACTCACTGACTaGCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTGACCAG +
Preference number: 1 (lower is better)
Translates to: PPRPGEAGMLLALTD*LVADWLDGMVTCDQ
Trigger: CTGGTCACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAACAGCATGCCAGCCTCTCCAGGCCTGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp GCCCCACCTCGGCCCTCTGCCACCAGCATCCATCAGCAGTCTTGGTaGGCAAACAAAGATGCCTCTTGGAGCTGCTGCCTAGGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: APPRPSATSIHQQSW*ANKDASWSCCLGVG
Trigger: CCCCACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTGGTGGCAGAGGGCCGAGGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp CAAGCTAGGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATaGCAGGCACTCCCGCACATGGCACCACAGCAATGCTGTCAAGGT +
Preference number: 1 (lower is better)
Translates to: QARGGEVPGGRCQQT*QALPHMAPQQCCQG
Trigger: ACCTTGACAGCATTGCTGTGGTGCCATGTGCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCCTAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp GTCAGATTCACCTCTAGGTCCCTCCCAGGCCTGGAGAGGCTGGCATaGTGTTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATG +
Preference number: 1 (lower is better)
Translates to: VRFTSRSLPGLERLA*CWHSLTAWWPTGWM
Trigger: CATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAACAGCATGCCAGCCTCTCCAGGCCTGGGAGGGACCTAGAGGTGAATCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp TTCACCTCTAGGTCCCTCCCAGGCCTGGAGAGGCTGGCATGCTGTTaGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGG +
Preference number: 1 (lower is better)
Translates to: FTSRSLPGLERLACC*HSLTAWWPTGWMEW
Trigger: CCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAACAGCATGCCAGCCTCTCCAGGCCTGGGAGGGACCTAGAGGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp GGGCTAGTACCTAGGATGAGGGCGATGAACACCTGCCCGAGGGACTaGATCTGTCCATTCACAGCCGCCTTGCCATCCCAGAGCTCTCGC +
Preference number: 1 (lower is better)
Translates to: GLVPRMRAMNTCPRD*ICPFTAALPSQSSR
Trigger: GCGAGAGCTCTGGGATGGCAAGGCGGCTGTGAATGGACAGATGCAGTCCCTCGGGCAGGTGTTCATCGCCCTCATCCTAGGTACTAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp AGGGAATGGAGCAGACCTGATCTAACCAAGCTAGGGGTGGGGAGGTaGCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCACA +
Preference number: 1 (lower is better)
Translates to: REWSRPDLTKLGVGR*PVVGASRHDRHSRT
Trigger: TGTGCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCCTAGCTTGGTTAGATCAGGTCTGCTCCATTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp GGTGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATaGGTGACCCTCCTTGGGGCCACTCCTTCCTGTAGCTATAAGTGC +
Preference number: 1 (lower is better)
Translates to: GAPVWPGCRSWGVWL*VTLLGATPSCSYKC
Trigger: GCACTTATAGCTACAGGAAGGAGTGGCCCCAAGGAGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp TCAGATCACCCTCTGGAGCTCCTCAGGGCCTGCAGGAGAAGGTGCTaGCTCCTCTGTGTTCAGACTCTACATCCAGCCCACCCCTCGCTG +
Preference number: 1 (lower is better)
Translates to: SDHPLELLRACRRRC*LLCVQTLHPAHPSL
Trigger: CAGCGAGGGGTGGGCTGGATGTAGAGTCTGAACACAGAGGAGTCAGCACCTTCTCCTGCAGGCCCTGAGGAGCTCCAGAGGGTGATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp AGGTGCACTGTACCTTTGACTGGAGCCACTACCTCAAAACCCTTCTaGCTGAAGCTCCAGCTGAGCCCCACCTCGGCCCTCTGCCACCAG +
Preference number: 1 (lower is better)
Translates to: RCTVPLTGATTSKPF*LKLQLSPTSALCHQ
Trigger: CTGGTGGCAGAGGGCCGAGGTGGGGCTCAGCTGGAGCTTCAGGCAGAAGGGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp TGCACTGAGGCCAGAGCCTGTACCCCTCATACTCAGATCACCCTCTaGAGCTCCTCAGGGCCTGCAGGAGAAGGTGCTGACTCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: CTEARACTPHTQITL*SSSGPAGEGADSSV
Trigger: CACAGAGGAGTCAGCACCTTCTCCTGCAGGCCCTGAGGAGCTCCAGAGGGTGATCTGAGTATGAGGGGTACAGGCTCTGGCCTCAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp GAGGCTGGCATGCTGTTGGCACTCACTGACTGCCTGGTGGCCGACTaGCTGGATGGAATGGTGACCTGTGACCAGTCTGTCTCTCTCCTC +
Preference number: 1 (lower is better)
Translates to: EAGMLLALTDCLVAD*LDGMVTCDQSVSLL
Trigger: GAGGAGAGAGACAGACTGGTCACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAACAGCATGCCAGCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp TCAGTGAACCCTGCAGAGGGTTCCAATGAGGGAATGGAGCAGACCTaGTCTAACCAAGCTAGGGGTGGGGAGGTGCCCGGTGGTAGGTGC +
Preference number: 1 (lower is better)
Translates to: SVNPAEGSNEGMEQT*SNQARGGEVPGGRC
Trigger: GCACCTACCACCGGGCACCTCCCCACCCCTAGCTTGGTTAGATCAGGTCTGCTCCATTCCCTCATTGGAACCCTCTGCAGGGTTCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp GGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTaGACTGTACCTTTGACTGGAGCCACTACCTCAAAACCCTTCTGC +
Preference number: 1 (lower is better)
Translates to: GCPCSIPPSSPWRGR*TVPLTGATTSKPFC
Trigger: GCAGAAGGGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp GGCAACACTGACAGTCATAGAGGCCTGCGGATCTTAGGGTGCCCCTaGAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTGTA +
Preference number: 1 (lower is better)
Translates to: GNTDSHRGLRILGCP*SIPPSSPWRGRCTV
Trigger: TACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAAGATCCGCAGGCCTCTATGACTGTCAGTGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp AGAAAGGGCAACACTGACAGTCATAGAGGCCTGCGGATCTTAGGGTaGCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGC +
Preference number: 1 (lower is better)
Translates to: RKGNTDSHRGLRILG*PCSIPPSSPWRGRC
Trigger: GCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAAGATCCGCAGGCCTCTATGACTGTCAGTGTTGCCCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp CTGCGGATCTTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATaGCGAGGGAGGTGCACTGTACCTTTGACTGGAGCCACTACCTCA +
Preference number: 1 (lower is better)
Translates to: LRILGCPCSIPPSSP*RGRCTVPLTGATTS
Trigger: TGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAAGATCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp AGGATGGCTGATCCTATGCCTGCTTCTCACTCCCTGGGACTGCACTaGGGCCAGAGCCTGTACCCCTCATACTCAGATCACCCTCTGGAG +
Preference number: 1 (lower is better)
Translates to: RMADPMPASHSLGLH*GQSLYPSYSDHPLE
Trigger: CTCCAGAGGGTGATCTGAGTATGAGGGGTACAGGCTCTGGCCTCAGTGCAGTCCCAGGGAGTGAGAAGCAGGCATAGGATCAGCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp AGCCAGCCCAGGGTCTCCTGCAGTGTCCCACCAGGGCTTCTCTTCTaGCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGC +
Preference number: 1 (lower is better)
Translates to: SQPRVSCSVPPGLLF*LPGLRHWFWSSLRS
Trigger: GCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGAAGCCCTGGTGGGACACTGCAGGAGACCCTGGGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp AAACCCTTCTGCCTGAAGCTCCAGCTGAGCCCCACCTCGGCCCTCTaGCACCAGCATCCATCAGCAGTCTTGGTGAGCAAACAAAGATGC +
Preference number: 1 (lower is better)
Translates to: KPFCLKLQLSPTSAL*HQHPSAVLVSKQRC
Trigger: GCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTGGTGGCAGAGGGCCGAGGTGGGGCTCAGCTGGAGCTTCAGGCAGAAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp GAGGAAGGATGGCTGATCCTATGCCTGCTTCTCACTCCCTGGGACTaGACTGAGGCCAGAGCCTGTACCCCTCATACTCAGATCACCCTC +
Preference number: 1 (lower is better)
Translates to: EEGWLILCLLLTPWD*TEARACTPHTQITL
Trigger: GAGGGTGATCTGAGTATGAGGGGTACAGGCTCTGGCCTCAGTGCAGTCCCAGGGAGTGAGAAGCAGGCATAGGATCAGCCATCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp TGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTaGCCTGTGACCAGTCTGTCTCTCTCCTCAGCTGATCTGAGAGTT +
Preference number: 1 (lower is better)
Translates to: WHSLTAWWPTGWMEW*PVTSLSLSSADLRV
Trigger: AACTCTCAGATCAGCTGAGGAGAGAGACAGACTGGTCACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 90 bp CTCTGCCACCAGCATCCATCAGCAGTCTTGGTGAGCAAACAAAGATaGCTCTTGGAGCTGCTGCCTAGGGGTGGGGTTGTTCAGTGGTGG +
Preference number: 1 (lower is better)
Translates to: LCHQHPSAVLVSKQR*LLELLPRGGVVQWW
Trigger: CCACCACTGAACAACCCCACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTGGTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp CCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTGTACCTTTGACTaGAGCCACTACCTCAAAACCCTTCTGCCTGAAGCTCCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: PSKFTMAREVHCTFD*SHYLKTLLPEAPAE
Trigger: CTCAGCTGGAGCTTCAGGCAGAAGGGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp CAGGGTCTCCTGCAGTGTCCCACCAGGGCTTCTCTTCTGCCTTCCTaGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: QGLLQCPTRASLLPS*PETLVLVILKEPLL
Trigger: CAGAAGAGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGAAGCCCTGGTGGGACACTGCAGGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp GATCTTGAGGAAGGATGGCTGATCCTATGCCTGCTTCTCACTCCCTaGGACTGCACTGAGGCCAGAGCCTGTACCCCTCATACTCAGATC +
Preference number: 1 (lower is better)
Translates to: DLEEGWLILCLLLTP*DCTEARACTPHTQI
Trigger: GATCTGAGTATGAGGGGTACAGGCTCTGGCCTCAGTGCAGTCCCAGGGAGTGAGAAGCAGGCATAGGATCAGCCATCCTTCCTCAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp TATTACAAGTCCAAGGGTCTGCACCTGAGGAAGTGTCCTGAGGAGTaGGCTGACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTA +
Preference number: 1 (lower is better)
Translates to: YYKSKGLHLRKCPEE*ADKLVESIVPQVCV
Trigger: TACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTCAGCCCACTCCTCAGGACACTTCCTCAGGTGCAGACCCTTGGACTTGTAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp TTCATCTGTCAAATAAGACAACAAACCCCTGGGTCATTAGAGGACTaGATGGGGTCAGGTTGCCACAGTAGATGCTCACTCACTGGGAGC +
Preference number: 1 (lower is better)
Translates to: FICQIRQQTPGSLED*MGSGCHSRCSLTGS
Trigger: GCTCCCAGTGAGTGAGCATCTACTGTGGCAACCTGACCCCATTCAGTCCTCTAATGACCCAGGGGTTTGTTGTCTTATTTGACAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 90 bp GGCACCACAGCAATGCTGTCAAGGTTGCCCGTGGAATCTGAAAGCTaGAACACTCATCTTTATATACAGAGTTGGCCAAAGCAAGACACC +
Preference number: 1 (lower is better)
Translates to: GTTAMLSRLPVESES*NTHLYIQSWPKQDT
Trigger: GGTGTCTTGCTTTGGCCAACTCTGTATATAAAGATGAGTGTTTCAGCTTTCAGATTCCACGGGCAACCTTGACAGCATTGCTGTGGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 90 bp TATGTGCACCTGCATTTGTGCATCACTGCACAAGCAACACACAAGTaGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGT +
Preference number: 1 (lower is better)
Translates to: YVHLHLCITAQATHK*LCLHVWECVSTSTC
Trigger: ACATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAATGCAGGTGCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCTCTGGTAGAAGTGGTTaGGCTGGCTGCCCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRSGRSG*AGCPGL
Trigger: CAGCCCAGGGCAGCCAGCTCAACCACTTCTACCAGA...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCACTCAGATCACCCTCTaGAGCTCCTCAGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRTQITL*SSSGPA
Trigger: TGCAGGCCCTGAGGAGCTCCAGAGGGTGATCTGAGT...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGCTGCTGGGCCTCCCTaGTGCTGTAACCCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLAAGPP*CCNPAS
Trigger: GCTGGCTGGGTTACAGCAGCAGGGAGGCCCAGCAGC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTGGGATAGGGCAGGGCTaGGTGGCATGGGGGATATGC +
Preference number: 2 (lower is better)
Translates to: CTCVARVSELGCVAMSDPGIGQG*VAWGIC
Trigger: GCATATCCCCCATGCCACTCAGCCCTGCCCTATCCC...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTGCTGGGCCTCCCTGCTaGTGTAACCCAGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GGWVRLPWVISERQDPGFAGPPC*CNPASP
Trigger: TGGGCTGGCTGGGTTACAGCAGCAGGGAGGCCCAGC...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 90 bp CTCTCCTCAGCTGATCTGAGAGTTCCTGGAGGCCAGGGACTGTGTTaGCCTCACCTCGGCACCTCTGTGCCTGGGGCAGAGGAACTGCTC +
Preference number: 2 (lower is better)
Translates to: LSSADLRVPGGQGLC*PHLGTSVPGAEELL
Trigger: GAGCAGTTCCTCTGCCCCAGGCACAGAGGTGCCGAGGTGAGGCAAACACAGTCCCTGGCCTCCAGGAACTCTCAGATCAGCTGAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAGAGCCGGGATGGGGGTaGGGGGATAGGGCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLEPGWG*GDRAGL
Trigger: CAGCCCTGCCCTATCCCCTCACCCCCATCCCGGCTC...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCACAGTTGCATGCTCCTaGATTGAGGTATGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRTVACS*IEVCVC
Trigger: GCACACACATACCTCAATTCAGGAGCATGCAACTGT...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCAGAGCTCTCGCCTCTaGCAGTGGGCTGCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSQSSRL*QWAAGP
Trigger: AGGCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTG...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGATGCCTCTTGGAGCTaGTGCCTAGGGGTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLDASWS*CLGVGL
Trigger: CAACCCCACCCCTAGGCAGCAGCTCCAAGAGGCATC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTATCCGTGTGACCCCATaGAGGGTCAGGGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: LALTDCLVADWLDGMVTCIRVTP*RVRGSL
Trigger: CAGGGAGCCCCTGACCCTGCATGGGGTCACACGGAT...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTACCTCGGCACCTCTGTaGCTGGGGCAGAGGAACTGC +
Preference number: 2 (lower is better)
Translates to: LALTDCLVADWLDGMVTCTSAPL*LGQRNC
Trigger: GCAGTTCCTCTGCCCCAGGCACAGAGGTGCCGAGGT...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCCTATGTCTTCACGTGTaGGAATGTGTGTCCACATCC +
Preference number: 2 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRLCLHV*ECVSTS
Trigger: GGATGTGGACACACATTCCCACACGTGAAGACATAG...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 90 bp CTGAGCCCCACCTCGGCCCTCTGCCACCAGCATCCATCAGCAGTCTaGGTGAGCAAACAAAGATGCCTCTTGGAGCTGCTGCCTAGGGGT +
Preference number: 2 (lower is better)
Translates to: LSPTSALCHQHPSAV*VSKQRCLLELLPRG
Trigger: ACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTGGTGGCAGAGGGCCGAGGTGGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTACCTGCCCGAGGGACTaGATCTGTCCATTCACAGCC +
Preference number: 2 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTTCPRD*ICPFTA
Trigger: GGCTGTGAATGGACAGATGCAGTCCCTCGGGCAGGT...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTGCCAGGGACTGTGTTTaGCTCACCTCGGCACCTCTG +
Preference number: 2 (lower is better)
Translates to: LALTDCLVADWLDGMVTCARDCV*LTSAPL
Trigger: CAGAGGTGCCGAGGTGAGGCAAACACAGTCCCTGGC...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCGTGGACGGCTACAGATaGAGCCGGGATGGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPVDGYR*SRDGGE
Trigger: CTCACCCCCATCCCGGCTCCATCTGTAGCCGTCCAC...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTGCTTCCCGGAGCAGATaGAGTCCTCAGACAGAGTCT +
Preference number: 2 (lower is better)
Translates to: CTCVARVSELGCVAMSDPASRSR*SPQTES
Trigger: AGACTCTGTCTGAGGACTCCATCTGCTCCGGGAAGC...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGAGTCTGTGTAGGGTGTaGACGGCTACAGATGGAGCC +
Preference number: 2 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLSLCRV*TATDGA
Trigger: GGCTCCATCTGTAGCCGTCCACACCCTACACAGACT...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCATCTCTAGATCCGTGTaGCCCCATGCAGGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSISRSV*PHAGSG
Trigger: CCCTGACCCTGCATGGGGTCACACGGATCTAGAGAT...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGTGCACACATGGAGGTaGCTGTGTGCACGTACAGTT +
Preference number: 2 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLVHTWR*LCARTV
Trigger: AACTGTACGTGCACACAGGCACCTCCATGTGTGCAC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCTTGTTCAGTGGTGGGTaGGTGCGCCTACCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPLFSGG*VRLPWV
Trigger: TACCCAGGGTAGGCGCACCCACCCACCACTGAACAA...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 90 bp CACCAGCATCCATCAGCAGTCTTGGTGAGCAAACAAAGATGCCTCTaGGAGCTGCTGCCTAGGGGTGGGGTTGTTCAGTGGTGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: HQHPSAVLVSKQRCL*ELLPRGGVVQWWVG
Trigger: ACCCACCCACCACTGAACAACCCCACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGTCCCTGGGACTGCACTaGGGCCAGAGCCTGTACCCC +
Preference number: 2 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVSLGLH*GQSLYP
Trigger: GGGGTACAGGCTCTGGCCTCAGTGCAGTCCCAGGGA...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACCATTCACAGCCGCCTTaGCATCCCAGAGCTCTCGCC +
Preference number: 2 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNHSQPP*HPRALA
Trigger: GGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGAATG...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCCCATGGCGAGGGAGGTaGACTGTACCTTTGACTGGA +
Preference number: 2 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPPWRGR*TVPLTG
Trigger: TCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGG...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTCTGTGTGTGAAGCCATaGGGACATCCAGGGCTAGTA +
Preference number: 2 (lower is better)
Translates to: GGWVRLPWVISERQDPGFLCVKP*GHPGLV
Trigger: TACTAGCCCTGGATGTCCCCATGGCTTCACACACAG...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGAAGTGTCCTGAGGAGTaGGCTGACAAACTGGTTGAG +
Preference number: 2 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLKCPEE*ADKLVE
Trigger: CTCAACCAGTTTGTCAGCCCACTCCTCAGGACACTT...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGAGGTGGGGTTGTTCAGTaGTGGGTGGGTGCGCCTACC +
Preference number: 2 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGGGVVQ*WVGAPT
Trigger: GGTAGGCGCACCCACCCACCACTGAACAACCCCACC...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 90 bp AGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTGTACCTTaGACTGGAGCCACTACCTCAAAACCCTTCTGCCTGAAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SIPPSSPWRGRCTVP*TGATTSKPFCLKLQ
Trigger: CTGGAGCTTCAGGCAGAAGGGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGCATCAGCAGTCTTGGTaGGCAAACAAAGATGCCTCT +
Preference number: 2 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLHQQSW*ANKDAS
Trigger: AGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATG...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCGGTGCACTGTACCTTTaGCTGGAGCCACTACCTCAA +
Preference number: 2 (lower is better)
Translates to: PETLRTPPESSVHPGGLCGALYL*LEPLPQ
Trigger: TTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACC...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTTTGAGGAAGGATGGCTaGTCCTATGCCTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: LALTDCLVADWLDGMVTCLRKDG*SYACFS
Trigger: TGAGAAGCAGGCATAGGATCAGCCATCCTTCCTCAA...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGCTGGCTGCCCTGGGCTaGCTTCCCGGAGCAGATGGA +
Preference number: 2 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGLAALG*LPGADG
Trigger: TCCATCTGCTCCGGGAAGCCAGCCCAGGGCAGCCAG...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTTCTCTTCTGCCTTCCTaGCCTGAGACATTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTSLLPS*PETLVL
Trigger: CAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCAACAAAGATGCCTCTTaGAGCTGCTGCCTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: PETLRTPPESSVHPGGLCNKDAS*SCCLGV
Trigger: CACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTT...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGCAAGCAACACACAAGTaGCTATGTCTTCACGTGTGG +
Preference number: 2 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLQATHK*LCLHVW
Trigger: CCACACGTGAAGACATAGCCACTTGTGTGTTGCTTG...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCTCTGCCTTCCTGGCCTaGGACATTGGTTTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSSAFLA*DIGFGH
Trigger: ATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGA...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGCAGCCCAGGGTCTCCTaGAGTGTCCCACCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMQPRVS*SVPPGL
Trigger: AAGCCCTGGTGGGACACTGCAGGAGACCCTGGGCTG...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGTGAGCAAACAAAGATaGCTCTTGGAGCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSVSKQR*LLELLP
Trigger: AGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCAC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 90 bp CCCACCAGGGCTTCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTaGGTCATCCTTAAGGAGCCTCTTCTGGTAGAAGTGGTTGAGCTG +
Preference number: 2 (lower is better)
Translates to: PTRASLLPSWPETLV*VILKEPLLVEVVEL
Trigger: CAGCTCAACCACTTCTACCAGAAGAGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGAAGCCCTGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGTGCATAGTTACAGCTaGGAAAGGGCAACACTGACA +
Preference number: 2 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSVHSYS*ERATLT
Trigger: TGTCAGTGTTGCCCTTTCTCAGCTGTAACTATGCAC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR TCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGATTCCAAGGAAGGAGCTaGCAAGATGCTCGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGFQGRS*QDARRS
Trigger: GCTCCTGCGAGCATCTTGTCAGCTCCTTCCTTGGAA...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATCTGCGGATCTTAGGGTaGCCCTGCAGCATCCCTCCA +
Preference number: 2 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNLRILG*PCSIPP
Trigger: TGGAGGGATGCTGCAGGGGCACCCTAAGATCCGCAG...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCACATCCACATGTGTGTaGTCATCTGCACCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPTSTCV*SSAPVC
Trigger: ACACACAGGTGCAGATGAGCACACACATGTGGATGT...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAACTCACTCCCTGGGACTaGACTGAGGCCAGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: RLLCASSCCKQWTLYLSELTPWD*TEARAC
Trigger: ACAGGCTCTGGCCTCAGTGCAGTCCCAGGGAGTGAG...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGATCTTGAGGAAGGATaGCTGATCCTATGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSDLEEG*LILCLL
Trigger: AAGCAGGCATAGGATCAGCCATCCTTCCTCAAGATC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 90 bp CAGTGTCCCACCAGGGCTTCTCTTCTGCCTTCCTGGCCTGAGACATaGGTTTTGGTCATCCTTAAGGAGCCTCTTCTGGTAGAAGTGGTT +
Preference number: 2 (lower is better)
Translates to: QCPTRASLLPSWPET*VLVILKEPLLVEVV
Trigger: AACCACTTCTACCAGAAGAGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGAAGCCCTGGTGGGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAGACATTGGTTTTaGTCATCCTTAAGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSLRHWF*SSLRSL
Trigger: GAGGCTCCTTAAGGATGACCAAAACCAATGTCTCAG...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGATCTTAGGGTGCCCCTaGAGCATCCCTCCAAGTTCA +
Preference number: 2 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVILGCP*SIPPSS
Trigger: TGAACTTGGAGGGATGCTGCAGGGGCACCCTAAGAT...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGTGGGTGCGCCTACCCTaGGTAATCTCTGAACGGCAA +
Preference number: 2 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGWVRLP*VISERQ
Trigger: TTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCA...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATCCTCCAAGTTCACCATaGCGAGGGAGGTGCACTGTA +
Preference number: 2 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNPPSSP*RGRCTV
Trigger: TACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGG...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACATGTCAAGGTTGCCCGTaGAATCTGAAAGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATCQGCP*NLKAET
Trigger: TGTTTCAGCTTTCAGATTCCACGGGCAACCTTGACA...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACATGTTTTCACAGTATGTaGACCTGCATTTGTGCATCA +
Preference number: 2 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATCFHSM*TCICAS
Trigger: TGATGCACAAATGCAGGTGCACATACTGTGAAAACA...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGCACTGTACCTTTGACTaGAGCCACTACCTCAAAACC +
Preference number: 2 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVHCTFD*SHYLKT
Trigger: GGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTG...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAACCTGGCCTGAGACATTaGTTTTGGTCATCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: RLLCASSCCKQWTLYLSEPGLRH*FWSSLR
Trigger: CCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGG...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR GCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAAGATTTCCTGTGCCTaGCTGTCTGCAGTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVKISCA*LSAVFL
Trigger: AAGAAAAACTGCAGACAGGCAGGCACAGGAAATCTT...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp GTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATaGGTGACCCTCCTTGGGGCCACTCCTTCCTGTAGC +
Preference number: 3 (lower is better)
Translates to: VWPGCRSWGVWL*VTLLGATPSCS
Trigger: GCTACAGGAAGGAGTGGCCCCAAGGAGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp CAGGCCTGGAGAGGCTGGCATGCTGTTGGCACTCACTaGCTGCCTGGTGGCCGACTGGCTGGATGGAATGGT +
Preference number: 3 (lower is better)
Translates to: QAWRGWHAVGTH*LPGGRLAGWNG
Trigger: ACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAACAGCATGCCAGCCTCTCCAGGCCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CAA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGGCAAGACCCTGGTTTaGGGGTCAGGCAGACTGCAG +
Preference number: 3 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLGKTLV*GSGRLQ
Trigger: CTGCAGTCTGCCTGACCCCAAAACCAGGGTCTTGCC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp CAGTGGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTaGACGGCAAGACCCTGGTTTTGGGGTCAGGCAGAC +
Preference number: 3 (lower is better)
Translates to: QWWVGAPTLGNL*TARPWFWGQAD
Trigger: GTCTGCCTGACCCCAAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp CCTAGGATGAGGGCGATGAACACCTGCCCGAGGGACTaGATCTGTCCATTCACAGCCGCCTTGCCATCCCAG +
Preference number: 3 (lower is better)
Translates to: PRMRAMNTCPRD*ICPFTAALPSQ
Trigger: CTGGGATGGCAAGGCGGCTGTGAATGGACAGATGCAGTCCCTCGGGCAGGTGTTCATCGCCCTCATCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp CCAGGGCTAGTACCTAGGATGAGGGCGATGAACACCTaGCCGAGGGACTGCATCTGTCCATTCACAGCCGCC +
Preference number: 3 (lower is better)
Translates to: PGLVPRMRAMNT*PRDCICPFTAA
Trigger: GGCGGCTGTGAATGGACAGATGCAGTCCCTCGGGCAGGTGTTCATCGCCCTCATCCTAGGTACTAGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp GACAGTCATAGAGGCCTGCGGATCTTAGGGTGCCCCTaGAGCATCCCTCCAAGTTCACCATGGCGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: DSHRGLRILGCP*SIPPSSPWRGR
Trigger: CCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAAGATCCGCAGGCCTCTATGACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp AGCAGACCTGATCTAACCAAGCTAGGGGTGGGGAGGTaGCCGGTGGTAGGTGCCAGCAGACATGACAGGCAC +
Preference number: 3 (lower is better)
Translates to: SRPDLTKLGVGR*PVVGASRHDRH
Trigger: GTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCCTAGCTTGGTTAGATCAGGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp GGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTaGCCCTCCTTGGGGCCACTCCTTCCTGTAGCTATA +
Preference number: 3 (lower is better)
Translates to: GQGVGVGVCGYE*PSLGPLLPVAI
Trigger: TATAGCTACAGGAAGGAGTGGCCCCAAGGAGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp GCCAGGGACTGTGTTTGCCTCACCTCGGCACCTCTGTaGCTGGGGCAGAGGAACTGCTCAACAAGTTCTGGT +
Preference number: 3 (lower is better)
Translates to: ARDCVCLTSAPL*LGQRNCSTSSG
Trigger: ACCAGAACTTGTTGAGCAGTTCCTCTGCCCCAGGCACAGAGGTGCCGAGGTGAGGCAAACACAGTCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATaGCGAGGGAGGTGCACTGTACCTTTGACTGGAGCC +
Preference number: 3 (lower is better)
Translates to: LGCPCSIPPSSP*RGRCTVPLTGA
Trigger: GGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp GTAGGTGCCAGCAGACATGACAGGCACTCCCGCACATaGCACCACAGCAATGCTGTCAAGGTTGCCCGTGGA +
Preference number: 3 (lower is better)
Translates to: VGASRHDRHSRT*HHSNAVKVARG
Trigger: TCCACGGGCAACCTTGACAGCATTGCTGTGGTGCCATGTGCGGGAGTGCCTGTCATGTCTGCTGGCACCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CAA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATACCATTCACAGCCGCCTaGCCATCCCAGAGCTCTCGC +
Preference number: 3 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIPFTAA*PSQSSR
Trigger: GCGAGAGCTCTGGGATGGCAAGGCGGCTGTGAATGG...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp TGGCTGATCCTATGCCTGCTTCTCACTCCCTGGGACTaGACTGAGGCCAGAGCCTGTACCCCTCATACTCAG +
Preference number: 3 (lower is better)
Translates to: WLILCLLLTPWD*TEARACTPHTQ
Trigger: CTGAGTATGAGGGGTACAGGCTCTGGCCTCAGTGCAGTCCCAGGGAGTGAGAAGCAGGCATAGGATCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp ATGCTGTTGGCACTCACTGACTGCCTGGTGGCCGACTaGCTGGATGGAATGGTGACCTGTGACCAGTCTGTC +
Preference number: 3 (lower is better)
Translates to: MLLALTDCLVAD*LDGMVTCDQSV
Trigger: GACAGACTGGTCACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAACAGCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp CGGCCCTCTGCCACCAGCATCCATCAGCAGTCTTGGTaGGCAAACAAAGATGCCTCTTGGAGCTGCTGCCTA +
Preference number: 3 (lower is better)
Translates to: RPSATSIHQQSW*ANKDASWSCCL
Trigger: TAGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTGGTGGCAGAGGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp AGTATGCCCCAGGCAGCCCCACCTGTCCAGACTCCATaGCCTAATGCTCCTTCCTTTCTCAGGCATAGCCCA +
Preference number: 3 (lower is better)
Translates to: SMPQAAPPVQTP*PNAPSFLRHSP
Trigger: TGGGCTATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTGCCTGGGGCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp AACACTGACAGTCATAGAGGCCTGCGGATCTTAGGGTaGCCCTGCAGCATCCCTCCAAGTTCACCATGGCGA +
Preference number: 3 (lower is better)
Translates to: NTDSHRGLRILG*PCSIPPSSPWR
Trigger: TCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAAGATCCGCAGGCCTCTATGACTGTCAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp GGGACTGTGTTTGCCTCACCTCGGCACCTCTGTGCCTaGGGCAGAGGAACTGCTCAACAAGTTCTGGTTGAA +
Preference number: 3 (lower is better)
Translates to: GTVFASPRHLCA*GRGTAQQVLVE
Trigger: TTCAACCAGAACTTGTTGAGCAGTTCCTCTGCCCCAGGCACAGAGGTGCCGAGGTGAGGCAAACACAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CAA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTTCCTGGCCTGAGACATaGGTTTTGGTCATCCTTAAG +
Preference number: 3 (lower is better)
Translates to: CTCVARVSELGCVAMSDPSWPET*VLVILK
Trigger: CTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGA...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CAA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCAAACAAAGATGCCTCTaGGAGCTGCTGCCTAGGGGT +
Preference number: 3 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSKQRCL*ELLPRG
Trigger: ACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTT...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp TCCAAGGGTCTGCACCTGAGGAAGTGTCCTGAGGAGTaGGCTGACAAACTGGTTGAGAGCATAGTGCCCCAA +
Preference number: 3 (lower is better)
Translates to: SKGLHLRKCPEE*ADKLVESIVPQ
Trigger: TTGGGGCACTATGCTCTCAACCAGTTTGTCAGCCCACTCCTCAGGACACTTCCTCAGGTGCAGACCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp CAGCATCCATCAGCAGTCTTGGTGAGCAAACAAAGATaGCTCTTGGAGCTGCTGCCTAGGGGTGGGGTTGTT +
Preference number: 3 (lower is better)
Translates to: QHPSAVLVSKQR*LLELLPRGGVV
Trigger: AACAACCCCACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp TGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTaGACTGTACCTTTGACTGGAGCCACTACCTCAAAA +
Preference number: 3 (lower is better)
Translates to: CSIPPSSPWRGR*TVPLTGATTSK
Trigger: TTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp TTCACCATGGCGAGGGAGGTGCACTGTACCTTTGACTaGAGCCACTACCTCAAAACCCTTCTGCCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: FTMAREVHCTFD*SHYLKTLLPEA
Trigger: AGCTTCAGGCAGAAGGGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CAA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGAAGGTGCACTGTACCTTaGACTGGAGCCACTACCTCA +
Preference number: 3 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGRCTVP*TGATTS
Trigger: TGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCT...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp CTCCCGCACATGGCACCACAGCAATGCTGTCAAGGTTaGCCGTGGAATCTGAAAGCTGAAACACTCATCTTT +
Preference number: 3 (lower is better)
Translates to: LPHMAPQQCCQG*PWNLKAETLIF
Trigger: AAAGATGAGTGTTTCAGCTTTCAGATTCCACGGGCAACCTTGACAGCATTGCTGTGGTGCCATGTGCGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp AAGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATaGACACTTTATCTCAGTGAACCCTGCAGAGGGTTC +
Preference number: 3 (lower is better)
Translates to: KRLLCASSCCKQ*TLYLSEPCRGF
Trigger: GAACCCTCTGCAGGGTTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR-3UTR CAA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGACCTGAGACATTGGTTTaGGTCATCCTTAAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGPETLV*VILKEP
Trigger: AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGG...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp CAAATAAGACAACAAACCCCTGGGTCATTAGAGGACTaGATGGGGTCAGGTTGCCACAGTAGATGCTCACTC +
Preference number: 3 (lower is better)
Translates to: QIRQQTPGSLED*MGSGCHSRCSL
Trigger: GAGTGAGCATCTACTGTGGCAACCTGACCCCATTCAGTCCTCTAATGACCCAGGGGTTTGTTGTCTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp CTGCATTTGTGCATCACTGCACAAGCAACACACAAGTaGCTATGTCTTCACGTGTGGGAATGTGTGTCCACA +
Preference number: 3 (lower is better)
Translates to: LHLCITAQATHK*LCLHVWECVST
Trigger: TGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp AAGGGGGTGTTTTCACAGTATGTGCACCTGCATTTGTaGATCACTGCACAAGCAACACACAAGTGGCTATGT +
Preference number: 3 (lower is better)
Translates to: KGVFSQYVHLHL*ITAQATHKWLC
Trigger: ACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAATGCAGGTGCACATACTGTGAAAACACCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CCA 72 bp CAGTTTCTTCATCTGTCAAATAAGACAACAAACCCCTaGGTCATTAGAGGACTGAATGGGGTCAGGTTGCCA +
Preference number: 3 (lower is better)
Translates to: QFLHLSNKTTNP*VIRGLNGVRLP
Trigger: TGGCAACCTGACCCCATTCAGTCCTCTAATGACCCAGGGGTTTGTTGTCTTATTTGACAGATGAAGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR TCA 72 bp CACCACAGCAATGCTGTCAAGGTTGCCCGTGGAATCTaGAAGCTGAAACACTCATCTTTATATACAGAGTTG +
Preference number: 3 (lower is better)
Translates to: HHSNAVKVARGI*KLKHSSLYTEL
Trigger: CAACTCTGTATATAAAGATGAGTGTTTCAGCTTTCAGATTCCACGGGCAACCTTGACAGCATTGCTGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR GCA 72 bp CGAATAATTATTAAGCGCTTACTGTGTGCGAGCAGCTaGTGTAAGCAATGGACACTTTATCTCAGTGAACCC +
Preference number: 3 (lower is better)
Translates to: RIIIKRLLCASS*CKQWTLYLSEP
Trigger: GGGTTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCTTAATAATTATTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCGAGCCGGGATGGGGGTaGGGGGATAGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSREPGWG*GDRAGL
Trigger: CAGCCCTGCCCTATCCCCTCACCCCCATCCCGGCTC...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCCTAGGGGTGGGGAGGTaGCCGGTGGTAGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGLGVGR*PVVGAS
Trigger: GCTGGCACCTACCACCGGGCACCTCCCCACCCCTAG...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCGCTGTTGGCACTCACTaGCTGCCTGGTGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRAVGTH*LPGGRL
Trigger: CAGTCGGCCACCAGGCAGTCAGTGAGTGCCAACAGC...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCGGTGGGGTTGTTCAGTaGTGGGTGGGTGCGCCTACC +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRGGVVQ*WVGAPT
Trigger: GGTAGGCGCACCCACCCACCACTGAACAACCCCACC...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCCCCCAAGGAAGGGGCTaGGAAGACAGGGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGPQGRG*EDRVPG
Trigger: TCCTGGGACCCTGTCTTCTCAGCCCCTTCCTTGGGG...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGGGCCCTCGGTGGCTTaGCTCCTGCGTCGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLGPSVA*LLRRWP
Trigger: GGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCGACTGGCTCCGGGCCTaGCCCAATTGCTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRDWLRA*PNCFSS
Trigger: GCTTGAGAAGCAATTGGGCCAGGCCCGGAGCCAGTC...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCCCTGCCAGAGGGCCTTaGTCTCTGACACTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRPARGP*SLTLVP
Trigger: AGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGG...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCCATCTGCTGCCATCCTaGCAGCGGTCTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRHLLPS*QRSLST
Trigger: AGTGGAGAGAGACCGCTGGCAGGATGGCAGCAGATG...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCCTGCGTGGAGAAGGCTaGGGCCATCTGAAACCTCCA +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGLRGEG*GHLKPP
Trigger: TGGAGGTTTCAGATGGCCTCAGCCTTCTCCACGCAG...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCCTGCAGCTTCCTCTCTaGCTCCAGGAGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRLQLPL*LQELAV
Trigger: AACAGCAAGCTCCTGGAGTCAGAGAGGAAGCTGCAG...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTCGGTGGCTTGGCTCCTaGGTCGGTGGCCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCRWLGS*VGGPLG
Trigger: GCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCG...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCTGCTGGTCCAGGTGGTaGTGGGACACTCGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGCWSRW*WDTRVF
Trigger: GAAAACGCGAGTGTCCCAGCACCACCTGGACCAGCA...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTTGGCTCCTGCGTCGGTaGCCCCCTTGGCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: CTCVARVSELGCVAMSDPWLLRR*PPWLTA
Trigger: GGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCA...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCTCATTCTCCTCCACCTaGATGGCCAGCCTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRSFSST*MASLVV
Trigger: GACAACCAGGCTGGCCATCCAGGTGGAGGAGAATGA...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCGGTTTTTGCACCCTCTaGTTCTGCCATCAACAGCCG +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRGFCTL*FCHQQP
Trigger: CGGCTGTTGATGGCAGAATCAGAGGGTGCAAAAACC...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTGCTGCTGGGCCTCCCTaGTGCTGTAACCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTAAGPP*CCNPAS
Trigger: GCTGGCTGGGTTACAGCAGCAGGGAGGCCCAGCAGC...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCGGTTGCCACAGTAGATaGTCACTCACTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGGCHSR*SLTGSC
Trigger: GCAGCTCCCAGTGAGTGAGCATCTACTGTGGCAACC...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCGTGCACACATGGAGGTaGCTGTGTGCACGTACAGTT +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRVHTWR*LCARTV
Trigger: AACTGTACGTGCACACAGGCACCTCCATGTGTGCAC...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCTGTAGCTGCTTCAGCTaGTCCATGAGGGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGCSCFS*SMRASM
Trigger: CATCGACGCCCTCATGGACCAGCTGAAGCAGCTACA...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCTGGGTGCGCCTACCCTaGGTAATCTCTGAACGGCAA +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGWVRLP*VISERQ
Trigger: TTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCA...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTGTGGGGGAAGCCCTGTaGTGCTGCAGCCCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GGWVRLPWVISERQDPGFVGEAL*CCSPVL
Trigger: CAGGACCGGGCTGCAGCACCACAGGGCTTCCCCCAC...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCGGGTATAGGCAGGGCTaGCCTCGCGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPGYRQG*PRGHWT
Trigger: GGTCCAGTGGCCGCGAGGTCAGCCCTGCCTATACCC...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGGGATAGGGCAGGGCTaGGTGGCATGGGGGATATGC +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLGIGQG*VAWGIC
Trigger: GCATATCCCCCATGCCACTCAGCCCTGCCCTATCCC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCGGTGCACTGTACCTTTaGCTGGAGCCACTACCTCAA +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGGALYL*LEPLPQ
Trigger: TTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACC...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCCGTTTCCCACACCTCTaGTTGGACTGGAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGRFPHL*LDWKLP
Trigger: AGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACG...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGGGCGACTAGGCTGTTaGTCCGCTGAGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLGRLGC*SAEPRC
Trigger: ACAGCGAGGCTCAGCGGAGCAACAGCCTAGTCGCCC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCACAGAGCTCTCGCCTCTaGCAGTGGGCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPQSSRL*QWAAGP
Trigger: AGGCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTG...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTCATCTGGGCCCTCGGTaGCTTGGCTCCTGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GGWVRLPWVISERQDPGFHLGPR*LGSCVG
Trigger: ACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATG...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTCTGGCTGCCCTGGGCTaGCTTCCCGGAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCLAALG*LPGADG
Trigger: TCCATCTGCTCCGGGAAGCCAGCCCAGGGCAGCCAG...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCAACAAAGATGCCTCTTaGAGCTGCTGCCTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGNKDAS*SCCLGV
Trigger: CACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTT...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCCAAGCCTGCCAACATaGTCGCCTGCTGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSPSLPT*SPAEAG
Trigger: CCCGGCCTCAGCAGGCGATCATGTTGGCAGGCTTGG...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGTCTGGTAGAAGTGGTTaGGCTGGCTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLSGRSG*AGCPGL
Trigger: CAGCCCAGGGCAGCCAGCTCAACCACTTCTACCAGA...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGTGTGTGGCTATGAGTaGCCCTCCTTGGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLVCGYE*PSLGPL
Trigger: GAGTGGCCCCAAGGAGGGTCACTCATAGCCACACAC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCATGGGGTGTGTGGCTATaGGTGACCCTCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPWGVWL*VTLLGA
Trigger: GGCCCCAAGGAGGGTCACTCATAGCCACACACCCCA...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCTCCCTGGGACTGCACTaGGGCCAGAGCCTGTACCCC +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSSLGLH*GQSLYP
Trigger: GGGGTACAGGCTCTGGCCTCAGTGCAGTCCCAGGGA...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTTTCCCCGCAGGGCACTaGCCAGGGCAGCCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GGWVRLPWVISERQDPGFFPAGH*PGQPLA
Trigger: TGCTAAAGGCTGCCCTGGGCAGTGCCCTGCGGGGAA...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCCTGTGTGCGAGCAGCTaGTGTAAGCAATGGACACTT +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGLCASS*CKQWTL
Trigger: AAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAG...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCGCTGCAGCCCGGTCCTaGATCCTTCCCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPAAARS*ILPHPA
Trigger: AGCTGGGTGGGGAAGGATGCAGGACCGGGCTGCAGC...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTCGTCGGTGGCCCCCTTaGCTGACAGCCTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGADGVLRQSLILSRPEARRWPP*LTAWSG
Trigger: CCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACG...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCTCCTGCTTCACAGACTaGATCTGGTTTCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGSCFTD*IWFRRS
Trigger: TGACCTCCGAAACCAGATCCAGTCTGTGAAGCAGGA...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGCTGTTCCCGCAGACTaGCTCCGGGCCTGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSAVPAD*LRAWPN
Trigger: ATTGGGCCAGGCCCGGAGCCAGTCTGCGGGAACAGC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTGGACTTGGTCAGGCCTaGGTCCTCCAGGAACTGGGT +
Preference number: 4 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTGLGQA*VLQELG
Trigger: ACCCAGTTCCTGGAGGACCCAGGCCTGACCAAGTCC...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGCGGCACCTCTGTGCCTaGGGCAGAGGAACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLRHLCA*GRGTAQ
Trigger: TTGAGCAGTTCCTCTGCCCCAGGCACAGAGGTGCCG...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGCAGGCCTGGAGAGGCTaGCATGCTGTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLQAWRG*HAVGTH
Trigger: GTGAGTGCCAACAGCATGCCAGCCTCTCCAGGCCTG...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGAAGGCTGAGGCCATCTaGAACCTCCAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLKAEAI*NLQGLL
Trigger: GAGGAGCCCTTGGAGGTTTCAGATGGCCTCAGCCTT...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACGGTGGCCCCCTTGGCTaGCAGCCTGGTCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNGGPLG*QPGQGC
Trigger: ACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACC...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCAAGGCTGTTGCTCCGCTaGGCCTCGCTGTTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPRLLLR*ASLFSC
Trigger: GCAACTGAACAGCGAGGCTCAGCGGAGCAACAGCCT...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTAACATGATCGCCTGCTaGGGCCGGGGACTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCNMIAC*GRGLGQ
Trigger: CTGACCAAGTCCCCGGCCTCAGCAGGCGATCATGTT...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTGCTCTCTGGGAGGCTaGTGCCTTCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PETLRTPPESSVHPGGLCCSLGG*CLPWLQ
Trigger: CTGGAGCCAGGGAAGGCATCAGCCTCCCAGAGAGCA...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTCATTCACAGCCGCCTTaGCATCCCAGAGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: GGWVRLPWVISERQDPGFHSQPP*HPRALA
Trigger: GGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGAATG...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTGATGCCTCTTGGAGCTaGTGCCTAGGGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GGWVRLPWVISERQDPGFDASWS*CLGVGL
Trigger: CAACCCCACCCCTAGGCAGCAGCTCCAAGAGGCATC...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCCCCACCTCGGCCCTCTaGCACCAGCATCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PETLRTPPESSVHPGGLCPTSAL*HQHPSA
Trigger: TGCTGATGGATGCTGGTGGCAGAGGGCCGAGGTGGG...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCATCCGTGTGACCCCATaGAGGGTCAGGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPIRVTP*RVRGSL
Trigger: CAGGGAGCCCCTGACCCTGCATGGGGTCACACGGAT...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCGCCTTTGCTCTAACTTaGTGTGGGATCTCTAGATCC +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGAFALT*CGISRS
Trigger: GGATCTAGAGATCCCACAGCAAGTTAGAGCAAAGGC...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTAGTTGCTGGTCCAGGTaGTGCTGGGACACTCGCGTT +
Preference number: 4 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTSCWSR*CWDTRV
Trigger: AACGCGAGTGTCCCAGCACCACCTGGACCAGCAACT...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTGAGCTGGGCAAAGGATaGGTCCTTCTTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: CTCVARVSELGCVAMSDPELGKG*VLLLAP
Trigger: GGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCTC...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTACTCAGATCACCCTCTaGAGCTCCTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CTCVARVSELGCVAMSDPTQITL*SSSGPA
Trigger: TGCAGGCCCTGAGGAGCTCCAGAGGGTGATCTGAGT...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTTGCCTGGTGGCCGACTaGCTGGATGGAATGGTGACC +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCCLVAD*LDGMVT
Trigger: GGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCA...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGGTCCCTCCCAGGCCTaGAGAGGCTGGCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSGPSQA*RGWHAV
Trigger: AACAGCATGCCAGCCTCTCCAGGCCTGGGAGGGACC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGACAGACCAGCTGCCTaGCTGTGCACCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PGADGVLRQSLILSRPEADRPAA*LCTWPT
Trigger: GGTGGGCCAGGTGCACAGCCAGGCAGCTGGTCTGTC...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTCACCGGCTGTCCCTGTaGAGGCAAATCTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTHRLSL*RQICPL
Trigger: AAGAGGACAGATTTGCCTTCACAGGGACAGCCGGTG...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAGCTGGGCCTCCCTGCTaGTGTAACCCAGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLAGPPC*CNPASP
Trigger: TGGGCTGGCTGGGTTACAGCAGCAGGGAGGCCCAGC...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTTCTCTCCTGGCTCTCTaGCTGGCCGTTTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CTCVARVSELGCVAMSDPSLLAL*LAVFLH
Trigger: GTGAAGGAAAACGGCCAGGCAGAGAGCCAGGAGAGA...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTGCTCCTGGATGCGATTaGTCAGCTGCTTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCAPGCD*SAASPW
Trigger: CCAGGGTGAAGCAGCTGACCAATCGCATCCAGGAGC...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGTGGCCCAGGATCTCATaGTACATCCGGAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLWPRIS*YIRKSS
Trigger: GGAGGACTTCCGGATGTACCATGAGATCCTGGGCCA...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTCCTCCAAGTTCACCATaGCGAGGGAGGTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: CTCVARVSELGCVAMSDPPPSSP*RGRCTV
Trigger: TACAGTGCACCTCCCTCGCCATGGTGAACTTGGAGG...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCACTCACTGACTGCCTaGTGGCCGACTGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSHSLTA*WPTGWM
Trigger: CATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTG...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTTCTCCTGCATTGCCTTaGACTGGAGCCGCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: CTCVARVSELGCVAMSDPSPALP*TGAAKC
Trigger: ACACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGA...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATAGTCCGAGAACCTAGGTaGGGTCCTGTGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIVREPR*GPVGTG
Trigger: CCCAGTCCCCACAGGACCTCACCTAGGTTCTCGGAC...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCATTCCAAGGAAGGAGCTaGCAAGATGCTCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPFQGRS*QDARRS
Trigger: GCTCCTGCGAGCATCTTGTCAGCTCCTTCCTTGGAA...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCTCTGCATTTTATAGATaGGAATGTGGAGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRSAFYR*ECGGSE
Trigger: CTCTGATCCTCCACATTCTCATCTATAAAATGCAGA...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTGTCTCTCTCCTCAGCTaGTCTGAGAGTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCVSLLS*SESSWR
Trigger: CCTCCAGGAACTCTCAGATCAGCTGAGGAGAGAGAC...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACACTGCGGATCTTAGGGTaGCCCTGCAGCATCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATLRILG*PCSIPP
Trigger: TGGAGGGATGCTGCAGGGGCACCCTAAGATCCGCAG...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAACCTCGGCACCTCTGTaGCTGGGGCAGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLTSAPL*LGQRNC
Trigger: GCAGTTCCTCTGCCCCAGGCACAGAGGTGCCGAGGT...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCACTGGAGAGGCTGGCATaGTGTTGGCACTCACTGACT +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPLERLA*CWHSLT
Trigger: AGTCAGTGAGTGCCAACAGCATGCCAGCCTCTCCAG...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAGAAGCCCTGTGGTGCTaGAGCCCGGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLEALWC*SPVLHP
Trigger: AGGATGCAGGACCGGGCTGCAGCACCACAGGGCTTC...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCTTTGGCTCCCCTGCGTaGAGAAGGCTGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSFGSPA*RRLRPS
Trigger: AGATGGCCTCAGCCTTCTCCACGCAGGGGAGCCAAA...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATAGCTCTGTCTCCCATCTaGGCCCTCGGTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIALSPI*ALGGLA
Trigger: AGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAGC...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACACTGGGAGCTGCTCTCTaGGAGGCTGATGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATLGAAL*EADAFP
Trigger: AGGGAAGGCATCAGCCTCCCAGAGAGCAGCTCCCAG...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACGTGGGTGCACCTGTGTaGCCAGGGTGTCGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNVGAPV*PGCRSW
Trigger: CCAACTCCGACACCCTGGCCACACAGGTGCACCCAC...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCTCCCAGGAGCCGCAGTaGCTTTTCCAAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSSQEPQ*LFQGRS
Trigger: GCTCCTTCCTTGGAAAAGCCACTGCGGCTCCTGGGA...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 72 bp CCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTaGGGAACTGCCACAGGGATGGGGTGGGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: PLYPDLIKEVGN*GTATGMGWGWW
Trigger: CCACCATCCCCACCCCATCCCTGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTGAAGATAGGAGCTGCTaGACGTTGATGTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTEDRSC*TLMSSP
Trigger: TGGGGAAGACATCAACGTTCAGCAGCTCCTATCTTC...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAGCAGGGAAGGCCTCGTaGGAGCAGATTCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLAGKAS*EQIPPV
Trigger: CACTGGTGGAATCTGCTCTCACGAGGCCTTCCCTGC...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCGGCTGGATGGAATGGTaGCCTGTGACCAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPGWMEW*PVTSLS
Trigger: AGACAGACTGGTCACAGGTCACCATTCCATCCAGCC...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAGCCTCGCTGTTCAGTTaGTGGTCCAGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLASLFS*WSRWCW
Trigger: CCAGCACCACCTGGACCAGCAACTGAACAGCGAGGC...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACTCCACCTCGGCAGCCTaGCAGAGGGCCTTGATCTCT +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNSTSAA*QRALIS
Trigger: AGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGA...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTCTGACTCCAGGAGCTTaGTGTTGCTCTCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: PGADGVLRQSLILSRPEALTPGA*CCSPPP
Trigger: GGGTGGAGGAGAGCAACAGCAAGCTCCTGGAGTCAG...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATGCTCCAGCACCACGGTaGGGTGTCGCTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYAPAPR*GVAPPA
Trigger: TGCAGGAGGAGCGACACCGCACCGTGGTGCTGGAGC...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGTGTCATCCTATTGCTTaGCTGTCTTCTGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLCHPIA*LSSAAA
Trigger: TGCGGCAGCAGAAGACAGGCAAGCAATAGGATGACA...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCTCACTCACTGGGAGCTaGAGTGATTATGAAAATACT +
Preference number: 4 (lower is better)
Translates to: SQPPCHPRALASASGLLGSLTGS*SDYENT
Trigger: AGTATTTTCATAATCACTGCAGCTCCCAGTGAGTGA...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCAACCTCAAAACCCTTCTaGCTGAAGCTCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPTSKPF*LKLQLS
Trigger: GCTCAGCTGGAGCTTCAGGCAGAAGGGTTTTGAGGT...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCGGATGGCTGATCCTATaGCTGCTTCTCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PETLRTPPESSVHPGGLCGWLIL*LLLTPW
Trigger: CCAGGGAGTGAGAAGCAGGCATAGGATCAGCCATCC...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGTCTTCAAGCTCTCTCTaGAGGACATCCCGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLSSSSL*RTSRSL
Trigger: CAGTGAACGGGATGTCCTCCAGAGAGAGCTTGAAGA...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTAGGCACTCCCGCACATaGCACCACAGCAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: PGADGVLRQSLILSRPEARHSRT*HHSNAV
Trigger: GACAGCATTGCTGTGGTGCCATGTGCGGGAGTGCCT...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 72 bp ACCTCGGCCCTCTGCCACCAGCATCCATCAGCAGTCTaGGTGAGCAAACAAAGATGCCTCTTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSALCHQHPSAV*VSKQRCLLELL
Trigger: CAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGGATGCTGGTGGCAGAGGGCCGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATAATCTCTAGATCCGTGTaGCCCCATGCAGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIISRSV*PHAGSG
Trigger: CCCTGACCCTGCATGGGGTCACACGGATCTAGAGAT...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTCTCTCTACCCAGATCTaGTCAAGGAGGTTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCLSTQI*SRRLGT
Trigger: AGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAG...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TGCACCTGTGTGGCCAGGGTGTCGGAGTTGGGGTGTGTGGCTATGAGTGACCCTATGCGATTGGTCAGCTaGTTCACCCTGGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: CTCVARVSELGCVAMSDPMRLVS*FTLVFA
Trigger: TGCAAAAACCAGGGTGAAGCAGCTGACCAATCGCAT...AGGGTCACTCATAGCCACACACCCCAACTCCGACACCCTGGCCACACAGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCAGGATCTCCTGTAGCTaGTTCAGCTGGTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPRISCS*FSWSMR
Trigger: CCTCATGGACCAGCTGAAGCAGCTACAGGAGATCCT...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCATCTGACACTTGTGCCTaGCAGCCTTTTTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPSDTCA*QPFCSG
Trigger: CCCAGAACAAAAAGGCTGGCAGGCACAAGTGTCAGA...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAACCTGCCCGAGGGACTaGATCTGTCCATTCACAGCC +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLTCPRD*ICPFTA
Trigger: GGCTGTGAATGGACAGATGCAGTCCCTCGGGCAGGT...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGAGCCTCTTGGAGCTGCTaGCTAGGGGTGGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGASWSC*LGVGLF
Trigger: GAACAACCCCACCCCTAGGCAGCAGCTCCAAGAGGC...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCCATCCCGGTGGCCTTTaGTCTAACTTGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PETLRTPPESSVHPGGLCHPGGL*SNLLWD
Trigger: ATCCCACAGCAAGTTAGAGCAAAGGCCACCGGGATG...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCCCTTTACTCCTCCTTaGTCCTTTGCCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSPFTPP*SFASGR
Trigger: TCTCCCTGAGGCAAAGGAGCAAGGAGGAGTAAAGGG...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCTAATGCTCCTTCCTTTCTCAGGCATAGCCCAGGAAGGGCAGCAGAACCACCCTCCAAGGGCTCCTCTTaGTCGTCAGCTCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PNAPSFLRHSPGRAAEPPSKGSS*SSALLL
Trigger: CAAAAGCAGAGCTGACGACCAAGAGGAGCCCTTGGA...GGGTGGTTCTGCTGCCCTTCCTGGGCTATGCCTGAGAAAGGAAGGAGCATTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTGCTATTTTTCGAGTTTaGCTCCCCTGCGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGWVRLPWVISERQDPGFAIFRV*LPCVEK
Trigger: CTTCTCCACGCAGGGGAGCCAAACTCGAAAAATAGC...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACAGCTCCACAATTTTGGTaGCGACCACGTCTCCGGCTA +
Preference number: 4 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATAPQFW*RPRLRL
Trigger: TAGCCGGAGACGTGGTCGCCACCAAAATTGTGGAGC...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCATAGCTCCACAATTTTaGTGGCGACCACGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PETLRTPPESSVHPGGLCIAPQF*WRPRLR
Trigger: CCGGAGACGTGGTCGCCACCAAAATTGTGGAGCTAT...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTTCAGCTGCTTCACCCTaGTTTTTGCACCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTSAASP*FLHPLI
Trigger: AATCAGAGGGTGCAAAAACCAGGGTGAAGCAGCTGA...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGCCTGGCCTGAGACATTaGTTTTGGTCATCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLPGLRH*FWSSLR
Trigger: CCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGG...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCCTGTGTGTGAAGCCATaGGGACATCCAGGGCTAGTA +
Preference number: 4 (lower is better)
Translates to: PETLRTPPESSVHPGGLCLCVKP*GHPGLV
Trigger: TACTAGCCCTGGATGTCCCCATGGCTTCACACACAG...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTGTGGACGGCTACAGATaGAGCCGGGATGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPVDGYR*SRDGGE
Trigger: CTCACCCCCATCCCGGCTCCATCTGTAGCCGTCCAC...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTTCTGATCAAGGAGGTTaGGAACTTGGGAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCSDQGG*ELGNCH
Trigger: GTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGA...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 72 bp CCATCAGCAGTCTTGGTGAGCAAACAAAGATGCCTCTaGGAGCTGCTGCCTAGGGGTGGGGTTGTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSAVLVSKQRCL*ELLPRGGVVQW
Trigger: CCACTGAACAACCCCACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 72 bp CCAAGTTCACCATGGCGAGGGAGGTGCACTGTACCTTaGACTGGAGCCACTACCTCAAAACCCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSSPWRGRCTVP*TGATTSKPFCL
Trigger: CAGGCAGAAGGGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGGTGAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATAGGAGCTGCTGAACGTTaGTGTCTTCCCCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIGAAER*CLPQPL
Trigger: GAGAGGTTGGGGAAGACATCAACGTTCAGCAGCTCC...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGGTCTTCATCTCACTTaGCAGCAGCTTGTTCCGAGA +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSGLHLT*QQLVPR
Trigger: TCTCGGAACAAGCTGCTGTCAAGTGAGATGAAGACC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATGAGGGCCTTGATCTCTaGCACTTGTGCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYEGLDL*HLCLPA
Trigger: GGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTC...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCAACAGTTGCATGCTCCTaGATTGAGGTATGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPTVACS*IEVCVC
Trigger: GCACACACATACCTCAATTCAGGAGCATGCAACTGT...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGGAATGGAGCAGACCTaGTCTAACCAAGCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: PGADGVLRQSLILSRPEAGMEQT*SNQARG
Trigger: ACCCCTAGCTTGGTTAGATCAGGTCTGCTCCATTCC...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACTGCAGAGGGTTCCAATaGGGGAATGGAGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNCRGFQ*GNGADL
Trigger: CAGGTCTGCTCCATTCCCTCATTGGAACCCTCTGCA...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGATCTCCTCAGCTGATCTaGGAGTTCCTGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGSPQLI*EFLEAR
Trigger: CCTGGCCTCCAGGAACTCTCAGATCAGCTGAGGAGA...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCATTCTGTAACCGTTTGTaGTGCATCTCCTGCATTGCC +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPFCNRL*CISCIA
Trigger: GGCAATGCAGGAGATGCAGCACAAACGGTTACAGAA...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAACAGCCCAGGGTCTCCTaGAGTGTCCCACCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RLLCASSCCKQWTLYLSEQPRVS*SVPPGL
Trigger: AAGCCCTGGTGGGACACTGCAGGAGACCCTGGGCTG...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACAATCTTAGGGTGCCCCTaGAGCATCCCTCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATILGCP*SIPPSS
Trigger: TGAACTTGGAGGGATGCTGCAGGGGCACCCTAAGAT...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTCTCACTCCCTGGGACTaGACTGAGGCCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPLTPWD*TEARAC
Trigger: ACAGGCTCTGGCCTCAGTGCAGTCCCAGGGAGTGAG...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGGTGGGGAGAGAAGTATaGCCCAGGCAGCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMVGREV*PRQPHL
Trigger: CAGGTGGGGCTGCCTGGGGCATACTTCTCTCCCCAC...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTACCATGGCCTGCAGCTaGGCGACTAGGCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPTMACS*ATRLLL
Trigger: GAGCAACAGCCTAGTCGCCCAGCTGCAGGCCATGGT...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGCCAGCTGTCGCACTTTaGCCTCCCGCTCAGCTACCA +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVPAVAL*PPAQLP
Trigger: TGGTAGCTGAGCGGGAGGCCAAAGTGCGACAGCTGG...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGCTAGGTGAGGTCCTGTaGGGACTGGGCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGLGEVL*GLGREG
Trigger: GCCTTCCCTGCCCAGTCCCCACAGGACCTCACCTAG...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACAGTCAGCTCTTCCATTTaGGATTCCACGGGCACATCG +
Preference number: 4 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATVSSSI*DSTGTS
Trigger: CGATGTGCCCGTGGAATCCCAAATGGAAGAGCTGAC...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGACGGCCAGGCCGACACTaGGCTGTCATCCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGRPGRH*AVILLL
Trigger: AAGCAATAGGATGACAGCCCAGTGTCGGCCTGGCCG...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTCTATGTCTTCACGTGTaGGAATGTGTGTCCACATCC +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCLCLHV*ECVSTS
Trigger: GGATGTGGACACACATTCCCACACGTGAAGACATAG...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCATCAGCAGTCTTGGTaGGCAAACAAAGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSHQQSW*ANKDAS
Trigger: AGAGGCATCTTTGTTTGCTCACCAAGACTGCTGATG...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCGTGCATAGTTACAGCTaGGAAAGGGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: PETLRTPPESSVHPGGLCVHSYS*ERATLT
Trigger: TGTCAGTGTTGCCCTTTCTCAGCTGTAACTATGCAC...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATAGGTGCCAGCAGACATaGCAGGCACTCCCGCACATG +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNRCQQT*QALPHM
Trigger: CATGTGCGGGAGTGCCTGTCATGTCTGCTGGCACCT...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATATGGAATGGTGACCTGTaGCCAGTCTGTCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIWNGDL*PVCLSP
Trigger: AGGAGAGAGACAGACTGGTCACAGGTCACCATTCCA...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATACTGCATCTCCTGCATTaGCTTGAACTGGAGCCGCAA +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGILHLLH*LELEPQ
Trigger: TTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAG...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATGCCATCCGCAGCTCCTaGTTCACAGACTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYAIRSS*FTDWIW
Trigger: CCAGATCCAGTCTGTGAAGCAGGAGCTGCGGATGGC...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATCTCCCGGTTGGGTTGTaGCTGTTGTTAGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYLPVGL*LLLEVG
Trigger: GCCCACCTCTAACAACAGGCACAACCCAACCGGGAG...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACGGGCTGTCATCCTATTaGTTGCCTGTCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNGLSSY*LPVFCC
Trigger: GCAGCAGAAGACAGGCAAGCAATAGGATGACAGCCC...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTAGGGCGATGAACACCTaGCCGAGGGACTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPRAMNT*PRDCIC
Trigger: ACAGATGCAGTCCCTCGGGCAGGTGTTCATCGCCCT...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGACCATGGCGAGGGAGGTaGACTGTACCTTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGPWRGR*TVPLTG
Trigger: TCCAGTCAAAGGTACAGTGCACCTCCCTCGCCATGG...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGAAGATTTCCTGTGCCTaGCTGTCTGCAGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLKISCA*LSAVFL
Trigger: AAGAAAAACTGCAGACAGGCAGGCACAGGAAATCTT...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGGCCAGGGACTGTGTTTaGCTCACCTCGGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMARDCV*LTSAPL
Trigger: CAGAGGTGCCGAGGTGAGGCAAACACAGTCCCTGGC...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCTTCACAGACTGGATCTaGTTTCGGAGGTCACTCATC +
Preference number: 4 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSFTDWI*FRRSLI
Trigger: GATGAGTGACCTCCGAAACCAGATCCAGTCTGTGAA...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGACAGACAACTCATCACTaGCTGTTCCCGCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGQTTHH*LFPQTG
Trigger: GCCAGTCTGCGGGAACAGCCAGTGATGAGTTGTCTG...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGGTGTGTGGCCCAGGCTaGTCACAGAGCGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVVCGPG*SQSEKI
Trigger: GATCTTCTCGCTCTGTGACCAGCCTGGGCCACACAC...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATGATTCCACCAGTGTGTaGCCCAGGCTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYDSTSV*PRLVTE
Trigger: CTCTGTGACCAGCCTGGGCCACACACTGGTGGAATC...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTACCAGCCTTTTTGTTCTaGGGAGTCCGAGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLPAFLF*GVREPR
Trigger: CCTAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGG...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATACTTCTCGCTCCCGGTTaGGTTGTGCCTGTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGILLAPG*VVPVVR
Trigger: TCTAACAACAGGCACAACCCAACCGGGAGCGAGAAG...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATTCTCCTCCACCTGGATaGCCAGCCTGGTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYSPPPG*PAWLSA
Trigger: AGCTGACAACCAGGCTGGCCATCCAGGTGGAGGAGA...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTCTGAGACATTGGTTTTaGTCATCCTTAAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LALTDCLVADWLDGMVTCLRHWF*SSLRSL
Trigger: GAGGCTCCTTAAGGATGACCAAAACCAATGTCTCAG...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCATGTCAAGGTTGCCCGTaGAATCTGAAAGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPCQGCP*NLKAET
Trigger: TGTTTCAGCTTTCAGATTCCACGGGCAACCTTGACA...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACAAAACAAGAATTTGTTaGGCCCGACCCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNKTRIC*ARPLQV
Trigger: GACCTGGAGGGGTCGGGCTCAACAAATTCTTGTTTT...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGGCTCCAGCTCCTGGATaGGATTGGTCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVAPAPG*DWSAAS
Trigger: TGAAGCAGCTGACCAATCGCATCCAGGAGCTGGAGC...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATTGGGGTCTCCAGCAATaGTCTGTCTCCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNWGLQQ*SVSHLG
Trigger: GCCCAGATGGGAGACAGAGCATTGCTGGAGACCCCA...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATATGAGCTCGTCATCATaGCGGCCCTTCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNMSSSS*RPFSTR
Trigger: CCTGGTGGAGAAGGGCCGGCATGATGACGAGCTCAT...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGCGCGTTTTCTCCTCCTaGAGACTCAGGCTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGRVFSS*RLRLPR
Trigger: CCTAGGCAGCCTGAGTCTGCAGGAGGAGAAAACGCG...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAAAAGGAGCTGACAAGATaGTCGCAGGAGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLLCASSCCKQWTLYLSEKELTR*SQEPQW
Trigger: CCACTGGGGCTCCTGCGAGCATCTTGTCAGCTCCTT...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATACTGTGCCTGCCTGTCTaGAGTTTTTCTTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGILCLPV*SFSFPS
Trigger: AGAGGGGAAAGAAAAACTGCAGACAGGCAGGCACAG...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGCCTTGGCTGACAGCCTaGTCAGGGCTGTCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMPWLTA*SGLSAV
Trigger: AACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGG...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGACACTCATCTTCAAGTTaGTGGCCACCAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGHSSSS*WPPACP
Trigger: AGGACAGGCTGGTGGCCACCAACTTGAAGATGAGTG...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATTGGTCCAGGTGGTGCTaGGACACTCGCGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNWSRWC*DTRVFS
Trigger: GGAGAAAACGCGAGTGTCCCAGCACCACCTGGACCA...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGTGGGCAGACCTGTTTTaGTCCTGGGAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVWADLF*SWELLS
Trigger: AGAGAGCAGCTCCCAGGACCAAAACAGGTCTGCCCA...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGGGCACATCGGAGAGCTaGGCAAAGGATGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGGTSES*AKDGSF
Trigger: GAAGGACCCATCCTTTGCCCAGCTCTCCGATGTGCC...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGGCTTCCCGGAGCAGATaGAGTCCTCAGACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVASRSR*SPQTES
Trigger: AGACTCTGTCTGAGGACTCCATCTGCTCCGGGAAGC...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGCTGCTTCTCACTCCCTaGGACTGCACTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGLLLTP*DCTEAR
Trigger: TCTGGCCTCAGTGCAGTCCCAGGGAGTGAGAAGCAG...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACAGTTCCAATGAGGGAATaGAGCAGACCTGATCTAACC +
Preference number: 4 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATVPMRE*SRPDLT
Trigger: GGTTAGATCAGGTCTGCTCCATTCCCTCATTGGAAC...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAGTTGCCCGTGGAATCTaGAAGCTGAAACACTCATCT +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLVARGI*KLKHSS
Trigger: AGATGAGTGTTTCAGCTTTCAGATTCCACGGGCAAC...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACTGTAACCGTTTGTGCTaGATCTCCTGCATTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNCNRLC*ISCIAL
Trigger: CAAGGCAATGCAGGAGATGCAGCACAAACGGTTACA...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGATTTCCCTTTCCAGGCTaGGGATCCTCAGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGFPFPG*GSSAGF
Trigger: AAAACCTGCTGAGGATCCGCAGCCTGGAAAGGGAAA...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAACCTGCAGACTCAGGCTaGCTAGGATCTCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RLLCASSCCKQWTLYLSEPADSG*LGSPVA
Trigger: AGCTACAGGAGATCCTAGGCAGCCTGAGTCTGCAGG...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTATGGAGGTGCCTGTGTaGACGTACAGTTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPMEVPV*TYSCML
Trigger: GAGCATGCAACTGTACGTGCACACAGGCACCTCCAT...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATAGTGCACCTGCATTTGTaGATCACTGCACAAGCAACA +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIVHLHL*ITAQAT
Trigger: TGTTGCTTGTGCAGTGATGCACAAATGCAGGTGCAC...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACCAATGCTGTCAAGGTTaGCCGTGGAATCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNQCCQG*PWNLKA
Trigger: AGCTTTCAGATTCCACGGGCAACCTTGACAGCATTG...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATATGGCACCACAGCAATaGTGTCAAGGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNMAPQQ*CQGCPW
Trigger: CCACGGGCAACCTTGACAGCATTGCTGTGGTGCCAT...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGAGTCTGTGTAGGGTGTaGACGGCTACAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMSLCRV*TATDGA
Trigger: GGCTCCATCTGTAGCCGTCCACACCCTACACAGACT...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAAGAAGTGGCTGGAGTGTaGGTCACACCATCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RLLCASSCCKQWTLYLSEEVAGV*VTPSLH
Trigger: GTGCAGAGATGGTGTGACCCACACTCCAGCCACTTC...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATAGGAGGTTGGGAACTTaGGAACTGCCACAGGGATGG +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNRRLGT*ELPQGW
Trigger: CCATCCCTGTGGCAGTTCCCAAGTTCCCAACCTCCT...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 72 bp ACCAGGGCTTCTCTTCTGCCTTCCTGGCCTGAGACATaGGTTTTGGTCATCCTTAAGGAGCCTCTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: TRASLLPSWPET*VLVILKEPLLV
Trigger: TACCAGAAGAGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGAAGCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGCGTCCACCGTTTCCCTaGGCTCATTTCGAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGRPPFP*AHFEGV
Trigger: AACACCTTCGAAATGAGCTCAGGGAAACGGTGGACG...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATACCAGGGTTCCCATCTaGCTCTTGAGGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNTRVPI*LLRVFI
Trigger: GATGAAGACCCTCAAGAGTCAGATGGGAACCCTGGT...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATTCTGCCTTCCTGGCCTaGGACATTGGTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYSAFLA*DIGFGH
Trigger: ATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGA...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGACCCTGGGTAATCTCTaGACGGCAAGACCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMTLGNL*TARPWF
Trigger: AAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGT...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTTTGAGGAAGGATGGCTaGTCCTATGCCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPLRKDG*SYACFS
Trigger: TGAGAAGCAGGCATAGGATCAGCCATCCTTCCTCAA...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATCAGGTTTTTCTCCTGTaGCGACAGCTTCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNQVFLL*RQLPWV
Trigger: GACCCAAGGAAGCTGTCGGCACAGGAGAAAAACCTG...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGTCATCTTCAAGTTGGTaGCCACCAGCCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMSSSSW*PPACPA
Trigger: TGCAGGACAGGCTGGTGGCCACCAACTTGAAGATGA...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTTGCCGACAGCTTCCTTaGGTCTGGATAGACAGACAA +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPCRQLP*VWIDRQ
Trigger: TTGTCTGTCTATCCAGACCCAAGGAAGCTGTCGGCA...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTGGACATCCCGTTCACTaGCAAGTTTCTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPGHPVH*QVSPSL
Trigger: AAGGCTTGGAGAAACTTGCCAGTGAACGGGATGTCC...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGCCTGGATGGCCAGCCTaGTTGTCAGCTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMPGWPA*LSALPF
Trigger: AAATGGAAGAGCTGACAACCAGGCTGGCCATCCAGG...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAAGTGTCCTGAGGAGTaGGCTGACAAACTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVKCPEE*ADKLVE
Trigger: CTCAACCAGTTTGTCAGCCCACTCCTCAGGACACTT...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
3UTR CAA 72 bp GGGAAGGGGGTGTTTTCACAGTATGTGCACCTGCATTaGTGCATCACTGCACAAGCAACACACAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: GKGVFSQYVHLH*CITAQATHKWL
Trigger: TAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAATGCAGGTGCACATACTGTGAAAACACCCCCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGATCTCTGCACTTCCCTaGGGTGATCTTGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMISALP*GDLEEG
Trigger: TCCTTCCTCAAGATCACCTCAGGGAAGTGCAGAGAT...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATACTCTTTTTCTCCATCTaGTTCTGTAACCGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGILFFSI*FCNRLC
Trigger: GCACAAACGGTTACAGAAGCAGATGGAGAAAAAGAG...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATTGCATTGCCTTGAACTaGAGCCGCAAAGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYCIALN*SRKVFC
Trigger: ACAGAACACTTTGCGGCTCCAGTTCAAGGCAATGCA...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTCAGCTTCCTTGGGTCTaGATAGACAGACAACTCATC +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPQLPWV*IDRQLI
Trigger: GATGAGTTGTCTGTCTATCCAGACCCAAGGAAGCTG...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATCACTGTACCTTTGACTaGAGCCACTACCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYHCTFD*SHYLKT
Trigger: GGTTTTGAGGTAGTGGCTCCAGTCAAAGGTACAGTG...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATCAAGCAACACACAAGTaGCTATGTCTTCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: THGGACVHVQLHAPELRYQATHK*LCLHVW
Trigger: CCACACGTGAAGACATAGCCACTTGTGTGTTGCTTG...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGTTCCCATCTGACTCTTaGGGGTCTTCATCTCACTTG +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGFPSDS*GSSSHL
Trigger: CAAGTGAGATGAAGACCCTCAAGAGTCAGATGGGAA...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR TCA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTGAAGATAGTGCACATTaGGTTGTCCGATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SLLPSWPETLVLVILKEPEDSAH*VVRSPS
Trigger: AGATGGAGATCGGACAACTCAATGTGCACTATCTTC...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGCACAGTATGTGCACCTaGATTTGTGCATCACTGCAC +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGHSMCT*ICASLH
Trigger: GTGCAGTGATGCACAAATGCAGGTGCACATACTGTG...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAAGACACTTTTCACCTaGCCCAGGATCTCATGGTAC +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGKTLFT*PRISWY
Trigger: GTACCATGAGATCCTGGGCCAGGTGAAAAGTGTCTT...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGTCTCTTCTGCCTTCCTaGCCTGAGACATTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMSLLPS*PETLVL
Trigger: CAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAAGATCTTGAGGAAGGATaGCTGATCCTATGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLLCASSCCKQWTLYLSEDLEEG*LILCLL
Trigger: AAGCAGGCATAGGATCAGCCATCCTTCCTCAAGATC...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAATCCCACACCTCTGATTaGACTGGAAACTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RLLCASSCCKQWTLYLSESHTSD*TGNSLK
Trigger: TTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGA...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTACAAGCTCTTGAACCTTaGTCTGCAAAACAAGAATTT +
Preference number: 4 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLQALEP*SAKQEF
Trigger: AAATTCTTGTTTTGCAGAGCAAGGTTCAAGAGCTTG...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGTGTTTTCACAGTATGTaGACCTGCATTTGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVCFHSM*TCICAS
Trigger: TGATGCACAAATGCAGGTGCACATACTGTGAAAACA...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR GCA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAAACAAGATTTCCTGTaGCTGCCTGTCTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGKQDFL*LPVCSF
Trigger: AAAACTGCAGACAGGCAGGCACAGGAAATCTTGTTT...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CCA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAGCTGCTGTAAGCAATaGACACTTTATCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVSCCKQ*TLYLSE
Trigger: TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCT...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CTGGGCCCTCGGTGGCTTGGCTCCTGCGTCGGTGGCCCCCTTGGCTaGCAGCCTGGTCAGGGCTGTCTGCAGTTCCCGCTCCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LGPRWLGSCVGGPLG*QPGQGCLQFPLQLL
Trigger: CAGGAGCTGGAGCGGGAACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 90 bp CCATCTGGGCCCTCGGTGGCTTGGCTCCTGCGTCGGTGGCCCCCTTaGCTGACAGCCTGGTCAGGGCTGTCTGCAGTTCCCGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PSGPSVAWLLRRWPP*LTAWSGLSAVPAPA
Trigger: AGCTGGAGCGGGAACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 90 bp CTCTGTCTCCCATCTGGGCCCTCGGTGGCTTGGCTCCTGCGTCGGTaGCCCCCTTGGCTGACAGCCTGGTCAGGGCTGTCTGCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LCLPSGPSVAWLLRR*PPWLTAWSGLSAVP
Trigger: GGGAACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 90 bp GGGTCTCCAGCAATGCTCTGTCTCCCATCTGGGCCCTCGGTGGCTTaGCTCCTGCGTCGGTGGCCCCCTTGGCTGACAGCCTGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: GSPAMLCLPSGPSVA*LLRRWPPWLTAWSG
Trigger: CCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAGCATTGCTGGAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 90 bp CCTGAGCAGCCAATGCTCTGTCTCCCATCTGGGCCCTCGGTGGCTTaGCTCCTGCGTCGGTGGCCCCCTTGGCTGACAGCCTGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PEQPMLCLPSGPSVA*LLRRWPPWLTAWSG
Trigger: CCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAGCATTGGCTGCTCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS-3UTR CAA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCTCCAGCTGTCGCACTTaGGCCTCCCGCTCAGCTACC +
Preference number: 5 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRSSCRT*ASRSAT
Trigger: GGTAGCTGAGCGGGAGGCCAAAGTGCGACAGCTGGA...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TCACAGCCGCCTTGCCATCCCAGAGCTCTCGCCTCTGCCAGTGGGCTGCTGGGCGCCAGGGTGTCGGAGTaGGGGTGTGTGGCTATGAGT +
Preference number: 5 (lower is better)
Translates to: SQPPCHPRALASASGLLGARVSE*GCVAMS
Trigger: ACTCATAGCCACACACCCCAACTCCGACACCCTGGC...GCCCAGCAGCCCACTGGCAGAGGCGAGAGCTCTGGGATGGCAAGGCGGCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCAGGTGCACTGTACCTTaGACTGGAGCCACTACCTCA +
Preference number: 5 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRRCTVP*TGATTS
Trigger: TGAGGTAGTGGCTCCAGTCAAAGGTACAGTGCACCT...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp TCAGCTACCATGGCCTGCAGCTGGGCGACTAGGCTGTTGCTCCGCTaGGCCTCGCTGTTCAGTTGCTGGTCCAGGTGGTGCTGGGACACT +
Preference number: 5 (lower is better)
Translates to: SATMACSWATRLLLR*ASLFSCWSRWCWDT
Trigger: AGTGTCCCAGCACCACCTGGACCAGCAACTGAACAGCGAGGCTCAGCGGAGCAACAGCCTAGTCGCCCAGCTGCAGGCCATGGTAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 90 bp GGCCAGGCCGACACTGGGCTGTCATCCTATTGCTTGCCTGTCTTCTaGTGCCGCAGGGCCTGCAGGAAGACACTTTTCACCTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GQADTGLSSYCLPVF*CRRACRKTLFTWPR
Trigger: CCTGGGCCAGGTGAAAAGTGTCTTCCTGCAGGCCCTGCGGCAGCAGAAGACAGGCAAGCAATAGGATGACAGCCCAGTGTCGGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp CGCAGGGCCTGCAGGAAGACACTTTTCACCTGGCCCAGGATCTCATaGTACATCCGGAAGTCCTCCTCCTTTCCCCGCAGGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: RRACRKTLFTWPRIS*YIRKSSSFPRRALP
Trigger: GGGCAGTGCCCTGCGGGGAAAGGAGGAGGACTTCCGGATGTACCATGAGATCCTGGGCCAGGTGAAAAGTGTCTTCCTGCAGGCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp TTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCAGGCCGACACTaGGCTGTCATCCTATTGCTTGCCTGTCTTCTGCTGCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LSSQDLRLPTRPGRH*AVILLLACLLLPQG
Trigger: GCCCTGCGGCAGCAGAAGACAGGCAAGCAATAGGATGACAGCCCAGTGTCGGCCTGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp CTTTGGAGGCCTAGGGTTGGAATGTGGATTGAGCCTGCAGGCCTCTaGAGTGTGGCTCGGGCTTGGGCCGCCCTGAGCAGCCAATGCTCT +
Preference number: 5 (lower is better)
Translates to: LWRPRVGMWIEPAGL*SVARAWAALSSQCS
Trigger: AGAGCATTGGCTGCTCAGGGCGGCCCAAGCCCGAGCCACACTCCAGAGGCCTGCAGGCTCAATCCACATTCCAACCCTAGGCCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS-3UTR CAA 90 bp GGGGTGGGGAGGTGCCCGGTGGTAGGTGCCAGCAGACATGACAGGCACTCCCGCGAGAGGTTAAATAACTaGCCCAAGGCCACACAGCTG +
Preference number: 5 (lower is better)
Translates to: GVGRCPVVGASRHDRHSRERLNN*PKATQL
Trigger: CAGCTGTGTGGCCTTGGGCAAGTTATTTAACCTCTC...GCGGGAGTGCCTGTCATGTCTGCTGGCACCTACCACCGGGCACCTCCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGGCCAGGGACTGTGTTaGCCTCACCTCGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLGQGLC*PHLGTS
Trigger: AGAGGTGCCGAGGTGAGGCAAACACAGTCCCTGGCC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp ACTTGGTCAGGCCTGGGTCCTCCAGGAACTGGGTATAGGCAGGGCTaGCCTCGCGGCCACTGGACCCCTCACCCACTCCTTTATTCCGAA +
Preference number: 5 (lower is better)
Translates to: TWSGLGPPGTGYRQG*PRGHWTPHPLLYSE
Trigger: TTCGGAATAAAGGAGTGGGTGAGGGGTCCAGTGGCCGCGAGGTCAGCCCTGCCTATACCCAGTTCCTGGAGGACCCAGGCCTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CCGGTCACGCTCCACCTCGGCAGCCTGCCAGAGGGCCTTGATCTCTaGCACTTGTGCCTGCCAGCCTTTTTGTTCTGGGGAGTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: PVTLHLGSLPEGLDL*HLCLPAFLFWGVRE
Trigger: TTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGAGCGTGACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp GGACTGGGCAGGGAAGGCCTCGTGAGAGCAGATTCCACCAGTGTGTaGCCCAGGCTGGTCACAGAGCGAGAAGATCCAAGCCTGCCAACA +
Preference number: 5 (lower is better)
Translates to: GLGREGLVRADSTSV*PRLVTEREDPSLPT
Trigger: TGTTGGCAGGCTTGGATCTTCTCGCTCTGTGACCAGCCTGGGCCACACACTGGTGGAATCTGCTCTCACGAGGCCTTCCCTGCCCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000472921.1
CDS-3UTR CAA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTCCATTCACAGCCGCCTaGCCATCCCAGAGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: GGWVRLPWVISERQDPGFPFTAA*PSQSSR
Trigger: GCGAGAGCTCTGGGATGGCAAGGCGGCTGTGAATGG...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTaGGGCTGCCCACCCGGCCAGGCCGACACTGGGCTGTCATCCTAT +
Preference number: 5 (lower is better)
Translates to: RSRWSPQTESYPLKT*GCPPGQADTGLSSY
Trigger: ATAGGATGACAGCCCAGTGTCGGCCTGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 90 bp ACAGTGACAAACTCGGTGAGCCGGTCACGCTCCACCTCGGCAGCCTaGCAGAGGGCCTTGATCTCTGACACTTGTGCCTGCCAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: TVTNSVSRSRSTSAA*QRALISDTCACQPF
Trigger: AAAAGGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGAGCGTGACCGGCTCACCGAGTTTGTCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp TCAGCTCCACTCTGGAATGTGCTTTGGAGGCCTAGGGTTGGAATGTaGATTGAGCCTGCAGGCCTCTGGAGTGTGGCTCGGGCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: SAPLWNVLWRPRVGM*IEPAGLWSVARAWA
Trigger: GGCCCAAGCCCGAGCCACACTCCAGAGGCCTGCAGGCTCAATCCACATTCCAACCCTAGGCCTCCAAAGCACATTCCAGAGTGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS-3UTR CAA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGGGATGGCCAGCCTGGTaGTCAGCTCTTCCATTTGGG +
Preference number: 5 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLGWPAW*SALPFG
Trigger: CCCAAATGGAAGAGCTGACAACCAGGCTGGCCATCC...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CTGGAACTGGAGCCTGACCCAGAGCAAGCAGTGTGCTCAAGGGACTaGGCACTCATGGCTCCAGAAAGGAATCCACTGTGCCAGCCGTGC +
Preference number: 5 (lower is better)
Translates to: LELEPDPEQAVCSRD*ALMAPERNPLCQPC
Trigger: GCACGGCTGGCACAGTGGATTCCTTTCTGGAGCCATGAGTGCTCAGTCCCTTGAGCACACTGCTTGCTCTGGGTCAGGCTCCAGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS TCA 90 bp GTTATGGACCAAGGGCTGGTGGGAGGAAGGACTGGAACTGGAGCCTaGCCCAGAGCAAGCAGTGTGCTCAAGGGACTGAGCACTCATGGC +
Preference number: 5 (lower is better)
Translates to: VMDQGLVGGRTGTGA*PRASSVLKGLSTHG
Trigger: GCCATGAGTGCTCAGTCCCTTGAGCACACTGCTTGCTCTGGGTCAGGCTCCAGTTCCAGTCCTTCCTCCCACCAGCCCTTGGTCCATAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS GCA 90 bp AGTTGCTGGTCCAGGTGGTGCTGGGACACTCGCGTTTTCTCCTCCTaGAGACTCAGGCTGCCTAGGATCTCCTGTAGCTGCTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCWSRWCWDTRVFSS*RLRLPRISCSCFSW
Trigger: CCAGCTGAAGCAGCTACAGGAGATCCTAGGCAGCCTGAGTCTGCAGGAGGAGAAAACGCGAGTGTCCCAGCACCACCTGGACCAGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 90 bp ACCTCGGCAGCCTGCCAGAGGGCCTTGATCTCTGACACTTGTGCCTaGCAGCCTTTTTGTTCTGGGGAGTCCGAGAACCTAGGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: TSAACQRALISDTCA*QPFCSGESENLGEV
Trigger: GACCTCACCTAGGTTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 90 bp CAAGTAGTGCAGGGAAGGCTTAATGGACTCTCCCTGGGTGGACAGTaGTGTCCTCCTCAGTCTAGAGCTGGGCAGGCACCACAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: QVVQGRLNGLSLGGQ*CPPQSRAGQAPQGQ
Trigger: CTGCCCTTGTGGTGCCTGCCCAGCTCTAGACTGAGGAGGACAGCACTGTCCACCCAGGGAGAGTCCATTAAGCCTTCCCTGCACTACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS CCA 90 bp GTGCCGACAGCTTCCTTGGGTCTGGATAGACAGACAACTCATCACTaGCTGTTCCCGCAGACTGGCTCCGGGCCTGGCCCAATTGCTTCT +
Preference number: 5 (lower is better)
Translates to: VPTASLGLDRQTTHH*LFPQTGSGPGPIAS
Trigger: AGAAGCAATTGGGCCAGGCCCGGAGCCAGTCTGCGGGAACAGCCAGTGATGAGTTGTCTGTCTATCCAGACCCAAGGAAGCTGTCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp ACACATGGAGGTGCCTGTGTGCACGTACAGTTGCATGCTCCTGAATTGAGGTATGCGTCGGTGGCCCCCTaGGCTGACAGCCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: THGGACVHVQLHAPELRYASVAP*ADSLVR
Trigger: CCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGC...ATACCTCAATTCAGGAGCATGCAACTGTACGTGCACACAGGCACCTCCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTTCCAGGAGCTTGCTGTaGCTCTCCTCCACCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LALTDCLVADWLDGMVTCSRSLL*LSSTRF
Trigger: GAAACGGGTGGAGGAGAGCAACAGCAAGCTCCTGGA...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 90 bp AGCTGGGCAAAGGATGGGTCCTTCTTCTCGCTCCCGGTTGGGTTGTaGCTGTTGTTAGAGGTGGGCAGACCTGTTTTGGTCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: SWAKDGSFFSLPVGL*LLLEVGRPVLVLGA
Trigger: AGCTCCCAGGACCAAAACAGGTCTGCCCACCTCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS GCA 90 bp GAAGCCCCAAGCAGAGGGAAGGGTGTTCAGCTCCACTCTGGAATGTaGTTTGGAGGCCTAGGGTTGGAATGTGGATTGAGCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: EAPSRGKGVQLHSGM*FGGLGLECGLSLQA
Trigger: GGCCTGCAGGCTCAATCCACATTCCAACCCTAGGCCTCCAAAGCACATTCCAGAGTGGAGCTGAACACCCTTCCCTCTGCTTGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS GCA 90 bp CAGCCACACAAGAAGCCCCAAGCCCTGGCTCTGAAAGACCTTCTGTaGCATCCGCAGCTCCTGCTTCACAGACTGGATCTGGTTTCGGAG +
Preference number: 5 (lower is better)
Translates to: QPHKKPQALALKDLL*HPQLLLHRLDLVSE
Trigger: CTCCGAAACCAGATCCAGTCTGTGAAGCAGGAGCTGCGGATGGCACAGAAGGTCTTTCAGAGCCAGGGCTTGGGGCTTCTTGTGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS CCA 90 bp TGGTCAGGGCTGTCTGCAGTTCCCGCTCCAGCTCCTGGATGCGATTaGTCAGCTGCTTCACCCTGGTTTTTGCACCCTCTGATTCTGCCA +
Preference number: 5 (lower is better)
Translates to: WSGLSAVPAPAPGCD*SAASPWFLHPLILP
Trigger: TGGCAGAATCAGAGGGTGCAAAAACCAGGGTGAAGCAGCTGACCAATCGCATCCAGGAGCTGGAGCGGGAACTGCAGACAGCCCTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 90 bp TCACAGACTGGATCTGGTTTCGGAGGTCACTCATCTTCAAGTTGGTaGCCACCAGCCTGTCCTGCAGGGCCTTCACCTCTGGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SQTGSGFGGHSSSSW*PPACPAGPSPLGSP
Trigger: TGGAGACCCCAGAGGTGAAGGCCCTGCAGGACAGGCTGGTGGCCACCAACTTGAAGATGAGTGACCTCCGAAACCAGATCCAGTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 90 bp GTTGTCAGCTCTTCCATTTGGGATTCCACGGGCACATCGGAGAGCTaGGCAAAGGATGGGTCCTTCTTCTCGCTCCCGGTTGGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: VVSSSIWDSTGTSES*AKDGSFFSLPVGLC
Trigger: GCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCTCTCCGATGTGCCCGTGGAATCCCAAATGGAAGAGCTGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp CCCAAGCAGAGGGAAGGGTGTTCAGCTCCACTCTGGAATGTGCTTTaGAGGCCTAGGGTTGGAATGTGGATTGAGCCTGCAGGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PKQREGCSAPLWNVL*RPRVGMWIEPAGLW
Trigger: CCAGAGGCCTGCAGGCTCAATCCACATTCCAACCCTAGGCCTCCAAAGCACATTCCAGAGTGGAGCTGAACACCCTTCCCTCTGCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS CCA 90 bp AGCCTGACCCAGAGCAAGCAGTGTGCTCAAGGGACTGAGCACTCATaGCTCCAGAAAGGAATCCACTGTGCCAGCCGTGCTCTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SLTQSKQCAQGTEHS*LQKGIHCASRALPK
Trigger: CTTGGGAAGAGCACGGCTGGCACAGTGGATTCCTTTCTGGAGCCATGAGTGCTCAGTCCCTTGAGCACACTGCTTGCTCTGGGTCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS-3UTR CAA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCATCACTTGACAGCAGCTaGTTCCGAGACCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPSLDSS*FRDLMP
Trigger: GGGCATGAGGTCTCGGAACAAGCTGCTGTCAAGTGA...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTGTTGGGTTGTGCCTGTaGTTAGAGGTGGGCAGACCT +
Preference number: 5 (lower is better)
Translates to: LALTDCLVADWLDGMVTCVGLCL*LEVGRP
Trigger: AGGTCTGCCCACCTCTAACAACAGGCACAACCCAAC...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CCAGAGACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCGCTCCCGGTTGGGTaGTGCCTGTTGTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: PETLRTPPESSVHPGGLCSLPVG*CLLLEV
Trigger: CACCTCTAACAACAGGCACAACCCAACCGGGAGCGA...GCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTAAACAAAGATGCCTCTaGGAGCTGCTGCCTAGGGGT +
Preference number: 5 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTKQRCL*ELLPRG
Trigger: ACCCCTAGGCAGCAGCTCCAAGAGGCATCTTTGTTT...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGAGGCTGGCATGCTGTaGGCACTCACTGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: PGADGVLRQSLILSRPEAEAGML*ALTDCL
Trigger: CAGGCAGTCAGTGAGTGCCAACAGCATGCCAGCCTC...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp ATCGGAGAGCTGGGCAAAGGATGGGTCCTTCTTCTCGCTCCCGGTTaGGTTGTGCCTGTTGTTAGAGGTGGGCAGACCTGTTTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: IGELGKGWVLLLAPG*VVPVVRGGQTCFGP
Trigger: AGGACCAAAACAGGTCTGCCCACCTCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCTCTCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS CCA 90 bp CTGATGGTGACAAGCAGCCGCCTGAACTTTTCAGTGTCGCTGCAATaGGTGGGTCTTTCTCTGGCCTCTCTGAGCACCTCACCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LMVTSSRLNFSVSLQ*VGLSLASLSTSPSP
Trigger: TGGGGAAGGTGAGGTGCTCAGAGAGGCCAGAGAAAGACCCACCCATTGCAGCGACACTGAAAAGTTCAGGCGGCTGCTTGTCACCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482100.1
CDS-3UTR CAA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTAGCTCCTGGATGCGATaGGTCAGCTGCTTCACCCTG +
Preference number: 5 (lower is better)
Translates to: PGADGVLRQSLILSRPEASSWMR*VSCFTL
Trigger: CAGGGTGAAGCAGCTGACCAATCGCATCCAGGAGCT...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTAGCCTGCCAGAGGGCCTaGATCTCTGACACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLACQRA*ISDTCA
Trigger: GGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGC...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTTCTGACTCCAGGAGCTaGCTGTTGCTCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PGADGVLRQSLILSRPEASDSRS*LLLSST
Trigger: GGTGGAGGAGAGCAACAGCAAGCTCCTGGAGTCAGA...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TTGGCACTCACTGACTGCCTGGTGGCCGACTGGCTGGATGGAATGGTGACCTGTTGGGCTGTCATCCTATaGCTTGCCTGTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LALTDCLVADWLDGMVTCWAVIL*LACLLL
Trigger: CAGCAGAAGACAGGCAAGCAATAGGATGACAGCCCA...ACAGGTCACCATTCCATCCAGCCAGTCGGCCACCAGGCAGTCAGTGAGTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CGTCATCATGCCGGCCCTTCTCCACCAGGGTTCCCATCTGACTCTTaGGGGTCTTCATCTCACTTGACAGCAGCTTGTTCCGAGACCTCA +
Preference number: 5 (lower is better)
Translates to: RHHAGPSPPGFPSDS*GSSSHLTAACSETS
Trigger: TGAGGTCTCGGAACAAGCTGCTGTCAAGTGAGATGAAGACCCTCAAGAGTCAGATGGGAACCCTGGTGGAGAAGGGCCGGCATGATGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp TTCCATTTGGGATTCCACGGGCACATCGGAGAGCTGGGCAAAGGATaGGTCCTTCTTCTCGCTCCCGGTTGGGTTGTGCCTGTTGTTAGA +
Preference number: 5 (lower is better)
Translates to: FHLGFHGHIGELGKG*VLLLAPGWVVPVVR
Trigger: TCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCTCTCCGATGTGCCCGTGGAATCCCAAATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS-3UTR CAA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGCTTCACCCTGGTTTTaGCACCCTCTGATTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSASPWF*HPLILP
Trigger: TGGCAGAATCAGAGGGTGCAAAAACCAGGGTGAAGC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp GGTGGGTGGGTGCGCCTACCCTGGGTAATCTCTGAACGGCAAGACCCTGGTTTTCTGCAAAACAAGAATTaGTTGAGCCCGACCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GGWVRLPWVISERQDPGFLQNKN*LSPTPP
Trigger: TGGAGGGGTCGGGCTCAACAAATTCTTGTTTTGCAG...AAAACCAGGGTCTTGCCGTTCAGAGATTACCCAGGGTAGGCGCACCCACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTACCGGGCCTGGCCCAATaGCTTCTCAAGCTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLPGLAQ*LLKLLN
Trigger: GTTCAAGAGCTTGAGAAGCAATTGGGCCAGGCCCGG...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACAGTGCCGACAGCTTCCTaGGGTCTGGATAGACAGACA +
Preference number: 5 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATVPTAS*GLDRQT
Trigger: TGTCTGTCTATCCAGACCCAAGGAAGCTGTCGGCAC...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CGCTGTCACACACTGTCCCCTCCAAGCACAGACCCTCTCTCTCCTGGCTCTCTGTCCTGGCCTGAGACATaGGTTTTGGTCATCCTTAAG +
Preference number: 5 (lower is better)
Translates to: RCHTLSPPSTDPLSPGSLSWPET*VLVILK
Trigger: CTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGA...CAGAGAGCCAGGAGAGAGAGGGTCTGTGCTTGGAGGGGACAGTGTGTGACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp GAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTGCCCACCCGGCCATGTGTGCACGTACAGTaGCATGCTCCTGAATTGAGG +
Preference number: 5 (lower is better)
Translates to: ESSDRVLSSQDLRLPTRPCVHVQ*HAPELR
Trigger: CCTCAATTCAGGAGCATGCAACTGTACGTGCACACA...TGGCCGGGTGGGCAGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCGCAATGCTGTCAAGGTaGCCCGTGGAATCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSAMLSR*PVESES
Trigger: GCTTTCAGATTCCACGGGCAACCTTGACAGCATTGC...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CTGCATCTCCTGCATTGCCTTGAACTGGAGCCGCAAAGTGTTCTGTaGGCTTTCATCTGCTGCCATCCTGCCAGCGGTCTCTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: LHLLHCLELEPQSVL*AFICCHPASGLSPL
Trigger: AAGTGGAGAGAGACCGCTGGCAGGATGGCAGCAGATGAAAGCTCACAGAACACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS TCA 90 bp TCTCAAAGCTATTTTTCGAGTTTGGCTCCCCTGCGTGGAGAAGGCTaGGGCCATCTGAAACCTCCAAGGGCTCCTCTTGGTCGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SQSYFSSLAPLRGEG*GHLKPPRAPLGRQL
Trigger: GAGCTGACGACCAAGAGGAGCCCTTGGAGGTTTCAGATGGCCTCAGCCTTCTCCACGCAGGGGAGCCAAACTCGAAAAATAGCTTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS TCA 90 bp ATGAGCTCGTCATCATGCCGGCCCTTCTCCACCAGGGTTCCCATCTaGCTCTTGAGGGTCTTCATCTCACTTGACAGCAGCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: MSSSSCRPFSTRVPI*LLRVFISLDSSLFR
Trigger: TCGGAACAAGCTGCTGTCAAGTGAGATGAAGACCCTCAAGAGTCAGATGGGAACCCTGGTGGAGAAGGGCCGGCATGATGACGAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp TTCCAGGTAGTTGAAGGACTGAGGTCCCTGTTCCCTGCAGGCTGCTaGTCAATTTCACCTTCTAGGAGCCACCTTGCCCCCTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: FQVVEGLRSLFPAGC*SISPSRSHLAPSIF
Trigger: AAAGATGGAGGGGGCAAGGTGGCTCCTAGAAGGTGAAATTGACCAGCAGCCTGCAGGGAACAGGGACCTCAGTCCTTCAACTACCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466031.5
CDS-3UTR CAA 90 bp CCCCCTCTCTACCCAGATCTGATCAAGGAGGTTGGGAACTTGGGAACTGCCACAATCTCCTGCATTGCCTaGAACTGGAGCCGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: PPLYPDLIKEVGNLGTATISCIA*NWSRKV
Trigger: CACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGAT...TGTGGCAGTTCCCAAGTTCCCAACCTCCTTGATCAGATCTGGGTAGAGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp ACCCTTAGGACCCCACCAGAATCATCAGTTCATCCCGGTGGCCTTTGCTCTAACGATAGCTCCACAATTTaGGTGGCGACCACGTCTCCG +
Preference number: 5 (lower is better)
Translates to: TLRTPPESSVHPGGLCSNDSSTI*VATTSP
Trigger: CGGAGACGTGGTCGCCACCAAAATTGTGGAGCTATC...GTTAGAGCAAAGGCCACCGGGATGAACTGATGATTCTGGTGGGGTCCTAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp GACAAACTGGTTGAGAGCATAGTGCCCCAAGTCTGTGTAGGGTGTGGACGGCTATATCTTCTCCAGATGTaGCTCCAGCACCACGGTGCG +
Preference number: 5 (lower is better)
Translates to: DKLVESIVPQVCVGCGRLYLLQM*LQHHGA
Trigger: CGCACCGTGGTGCTGGAGCAACATCTGGAGAAGATA...TAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTCTCAACCAGTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTGGCAAGACCCTGGTTTaGGGGTCAGGCAGACTGCAG +
Preference number: 5 (lower is better)
Translates to: SLLPSWPETLVLVILKEPGKTLV*GSGRLQ
Trigger: CTGCAGTCTGCCTGACCCCAAAACCAGGGTCTTGCC...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TTAGGGTGCCCCTGCAGCATCCCTCCAAGTTCACCATGGCGAGGGAGGTGCACTCTCAACAAGTTCTGGTaGAACAAATGGAGGGAACAC +
Preference number: 5 (lower is better)
Translates to: LGCPCSIPPSSPWRGRCTLNKFW*NKWREH
Trigger: GTGTTCCCTCCATTTGTTCAACCAGAACTTGTTGAG...AGTGCACCTCCCTCGCCATGGTGAACTTGGAGGGATGCTGCAGGGGCACCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGGTGGGCAGACCTGTTTaGGTCCTGGGAGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMVGRPV*VLGAAL
Trigger: GAGAGCAGCTCCCAGGACCAAAACAGGTCTGCCCAC...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CCCACCCAGCTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCTATGTGCACCTGCATTaGTGCATCACTGCACAAGCA +
Preference number: 5 (lower is better)
Translates to: PTQLHHGVSHTSDWTGNSYVHLH*CITAQA
Trigger: TGCTTGTGCAGTGATGCACAAATGCAGGTGCACATA...GGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAGCTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGTCACTCATCTTCAAGTaGGTGGCCACCAGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVSLIFK*VATSLS
Trigger: GGACAGGCTGGTGGCCACCAACTTGAAGATGAGTGA...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATACAAAACAAGAATTTGTaGAGCCCGACCCCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIQNKNL*SPTPPG
Trigger: ACCTGGAGGGGTCGGGCTCAACAAATTCTTGTTTTG...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CCCGGAGCAGATGGAGTCCTCAGACAGAGTCTTATCCTCTCAAGACCTGAGGCTATAGTGCACATTGAGTaGTCCGATCTCCATCTCCAG +
Preference number: 5 (lower is better)
Translates to: PGADGVLRQSLILSRPEAIVHIE*SDLHLQ
Trigger: CTGGAGATGGAGATCGGACAACTCAATGTGCACTAT...AGCCTCAGGTCTTGAGAGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp AGCGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGCTGTCATCCTATTGCTaGCCTGTCTTCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SAYCVRAAAVSNGHFISVLSSYC*PVFCCR
Trigger: GCGGCAGCAGAAGACAGGCAAGCAATAGGATGACAG...CACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CCATCTGCTTCTGTAACCGTTTGTGCTGCATCTCCTGCATTGCCTTaGACTGGAGCCGCAAAGTGTTCTGTGAGCTTTCATCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PSASVTVCAASPALP*TGAAKCSVSFHLLP
Trigger: TGGCAGCAGATGAAAGCTCACAGAACACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTTACAGAAGCAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS TCA 90 bp CTCCACCAGGGTTCCCATCTGACTCTTGAGGGTCTTCATCTCACTTaGCAGCAGCTTGTTCCGAGACCTCATGCCCTCGAACTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: LHQGSHLTLEGLHLT*QQLVPRPHALELLF
Trigger: AAAAAGAAGTTCGAGGGCATGAGGTCTCGGAACAAGCTGCTGTCAAGTGAGATGAAGACCCTCAAGAGTCAGATGGGAACCCTGGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 90 bp TTTTTCCCTTTCCAGGCTGCGGATCCTCAGCAGGTTTTTCTCCTGTaGCGACAGCTTCCTTGGGTCTGGATAGACAGACAACTCATCACT +
Preference number: 5 (lower is better)
Translates to: FFPFQAADPQQVFLL*RQLPWVWIDRQLIT
Trigger: AGTGATGAGTTGTCTGTCTATCCAGACCCAAGGAAGCTGTCGGCACAGGAGAAAAACCTGCTGAGGATCCGCAGCCTGGAAAGGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp TGCTTCTGTAACCGTTTGTGCTGCATCTCCTGCATTGCCTTGAACTaGAGCCGCAAAGTGTTCTGTGAGCTTTCATCTGCTGCCATCCTG +
Preference number: 5 (lower is better)
Translates to: CFCNRLCCISCIALN*SRKVFCELSSAAIL
Trigger: CAGGATGGCAGCAGATGAAAGCTCACAGAACACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTTACAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS-3UTR CAA 90 bp ATTTGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGCTCCAAGGGCTCCTCTaGGTCGTCAGCTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: ICASLHKQHTSGYVFTCGLQGLL*VVSSAF
Trigger: AAAAGCAGAGCTGACGACCAAGAGGAGCCCTTGGAG...CCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGTGCCTGCCAGCCTTTTaGTTCTGGGGAGTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMCLPAF*FWGVRE
Trigger: TTCTCGGACTCCCCAGAACAAAAAGGCTGGCAGGCA...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATACCTGAGACATTGGTTTaGGTCATCCTTAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGIPETLV*VILKEP
Trigger: AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGG...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 90 bp CCTTCAGCAGCTTATACAATCGCCCGTTCTCGTCCACCGTTTCCCTaGGCTCATTTCGAAGGTGTTCAATCTCATCTTCAAGCACCCTCT +
Preference number: 5 (lower is better)
Translates to: PSAAYTIARSRPPFP*AHFEGVQSHLQAPS
Trigger: AGAGGGTGCTTGAAGATGAGATTGAACACCTTCGAAATGAGCTCAGGGAAACGGTGGACGAGAACGGGCGATTGTATAAGCTGCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS GCA 90 bp AAATCCTTTGTTCAGGCCAGGAGAAGTCTGATGACTCACTCACCTTaGTCTGCAAAACAAGAATTTGTTGAGCCCGACCCCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KSFVQARRSLMTHSP*SAKQEFVEPDPSRS
Trigger: GGACCTGGAGGGGTCGGGCTCAACAAATTCTTGTTTTGCAGAGCAAGGTGAGTGAGTCATCAGACTTCTCCTGGCCTGAACAAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479576.5
CDS-3UTR CAA 90 bp CTCCATCATGGCGTTTCCCACACCTCTGATTGGACTGGAAACTCCCTGAAAGGATGCTTCTGTAACCGTTaGTGCTGCATCTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: LHHGVSHTSDWTGNSLKGCFCNR*CCISCI
Trigger: AATGCAGGAGATGCAGCACAAACGGTTACAGAAGCA...TCCTTTCAGGGAGTTTCCAGTCCAATCAGAGGTGTGGGAAACGCCATGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TCTCTTCTGCCTTCCTGGCCTGAGACATTGGTTTTGGTCATCCTTAAGGAGCCTAGCTATTTTTCGAGTTaGGCTCCCCTGCGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: SLLPSWPETLVLVILKEPSYFSS*APLRGE
Trigger: TTCTCCACGCAGGGGAGCCAAACTCGAAAAATAGCT...AGGCTCCTTAAGGATGACCAAAACCAATGTCTCAGGCCAGGAAGGCAGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CAGCCCCACCTGTCCAGACTCCATGACCTAATGCTCCTTCCTTTCTCAGGCATATTGCTTCTCAAGCTCTaGAACCTTGCTCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: QPHLSRLHDLMLLPFSGILLLKL*NLALQN
Trigger: GTTTTGCAGAGCAAGGTTCAAGAGCTTGAGAAGCAA...TATGCCTGAGAAAGGAAGGAGCATTAGGTCATGGAGTCTGGACAGGTGGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp TGTGCATCACTGCACAAGCAACACACAAGTGGCTATGTCTTCACGTGTGGGAATGGGTCTTCATCTCACTaGACAGCAGCTTGTTCCGAG +
Preference number: 5 (lower is better)
Translates to: CASLHKQHTSGYVFTCGNGSSSH*TAACSE
Trigger: CTCGGAACAAGCTGCTGTCAAGTGAGATGAAGACCC...ATTCCCACACGTGAAGACATAGCCACTTGTGTGTTGCTTGTGCAGTGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGTGTCAGCTCTTCCATTaGGGATTCCACGGGCACATC +
Preference number: 5 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMCQLFH*GFHGHI
Trigger: GATGTGCCCGTGGAATCCCAAATGGAAGAGCTGACA...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp AACACACAAGTGGCTATGTCTTCACGTGTGGGAATGTGTGTCCACATCCACATGTCAGGGTCCCTATCTTaGACCCCTTTGATGACCTCC +
Preference number: 5 (lower is better)
Translates to: NTQVAMSSRVGMCVHIHMSGSLS*TPLMTS
Trigger: GGAGGTCATCAAAGGGGTCAAAGATAGGGACCCTGA...CATGTGGATGTGGACACACATTCCCACACGTGAAGACATAGCCACTTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS-3UTR CAA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAATCTTTATATACAGAGTaGGCCAAAGCAAGACACCAG +
Preference number: 5 (lower is better)
Translates to: RLLCASSCCKQWTLYLSESLYTE*AKARHQ
Trigger: CTGGTGTCTTGCTTTGGCCAACTCTGTATATAAAGA...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 90 bp ACCTATTCATTTTCTGTTACAGATAGCAGAGAAGAAGGCAGGTGTTaGCAGGCTTTCAAGTTAAGTAAGGGTGACATTAAGGGGAGACCC +
Preference number: 5 (lower is better)
Translates to: TYSFSVTDSREEGRC*QAFKLSKGDIKGRP
Trigger: GGGTCTCCCCTTAATGTCACCCTTACTTAACTTGAAAGCCTGCCAACACCTGCCTTCTTCTCTGCTATCTGTAACAGAAAATGAATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS-3UTR CAA 90 bp CGCTTACTGTGTGCGAGCAGCTGCTGTAAGCAATGGACACTTTATCTCAGTGAATTCTTTTTGAGGTGTTaGATTTCAAAGTCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RLLCASSCCKQWTLYLSEFFLRC*ISKSLS
Trigger: GGAAAGGGACTTTGAAATCAAACACCTCAAAAAGAA...TTCACTGAGATAAAGTGTCCATTGCTTACAGCAGCTGCTCGCACACAGTAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CAA 90 bp CCCATCTGGGCCCTCGGTGGCTTGGCTCCTGCGTCGGTGGCCCCCTaGGCTGACAGCCTGGTCAGGGCTGTCTGCAGTTCCCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PIWALGGLAPASVAP*ADSLVRAVCSSRSS
Trigger: GCTGGAGCGGGAACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS TCA 72 bp CGGTGGCTTGGCTCCTGCGTCGGTGGCCCCCTTGGCTaGCAGCCTGGTCAGGGCTGTCTGCAGTTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: RWLGSCVGGPLG*QPGQGCLQFPL
Trigger: GAGCGGGAACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp CCCTCGGTGGCTTGGCTCCTGCGTCGGTGGCCCCCTTaGCTGACAGCCTGGTCAGGGCTGTCTGCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: PSVAWLLRRWPP*LTAWSGLSAVP
Trigger: GGGAACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp CCATCTGGGCCCTCGGTGGCTTGGCTCCTGCGTCGGTaGCCCCCTTGGCTGACAGCCTGGTCAGGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: PSGPSVAWLLRR*PPWLTAWSGLS
Trigger: AGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CAA 90 bp GGGGTCTCCAGCAATGCTCTGTCTCCCATCTGGGCCCTCGGTGGCTaGGCTCCTGCGTCGGTGGCCCCCTTGGCTGACAGCCTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GVSSNALSPIWALGG*APASVAPLADSLVR
Trigger: CCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAGCATTGCTGGAGACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp TGGCTCCTGCGTCGGTGGCCCCCTTGGCTGACAGCCTaGTCAGGGCTGTCTGCAGTTCCCGCTCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: WLLRRWPPWLTA*SGLSAVPAPAP
Trigger: AGGAGCTGGAGCGGGAACTGCAGACAGCCCTGACCAGGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp GCAATGCTCTGTCTCCCATCTGGGCCCTCGGTGGCTTaGCTCCTGCGTCGGTGGCCCCCTTGGCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: AMLCLPSGPSVA*LLRRWPPWLTA
Trigger: GGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAGCATTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp CCAATGCTCTGTCTCCCATCTGGGCCCTCGGTGGCTTaGCTCCTGCGTCGGTGGCCCCCTTGGCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: PMLCLPSGPSVA*LLRRWPPWLTA
Trigger: GGCTGTCAGCCAAGGGGGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAGCATTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS CCA 72 bp ACCTCTGGGGTCTCCAGCAATGCTCTGTCTCCCATCTaGGCCCTCGGTGGCTTGGCTCCTGCGTCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: TSGVSSNALSPI*ALGGLAPASVA
Trigger: GGCCACCGACGCAGGAGCCAAGCCACCGAGGGCCCAGATGGGAGACAGAGCATTGCTGGAGACCCCAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp GGTGGCCACCAGCCTGTCCTGCAGGGCCTTCACCTCTaGGGTCTCCAGCAATGCTCTGTCTCCCATCTGGGC +
Preference number: 6 (lower is better)
Translates to: GGHQPVLQGLHL*GLQQCSVSHLG
Trigger: GCCCAGATGGGAGACAGAGCATTGCTGGAGACCCCAGAGGTGAAGGCCCTGCAGGACAGGCTGGTGGCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp CCTAGGGTTGGAATGTGGATTGAGCCTGCAGGCCTCTaGAGTGTGGCTCGGGCTTGGGCCGCCCTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PRVGMWIEPAGL*SVARAWAALSS
Trigger: GCTGCTCAGGGCGGCCCAAGCCCGAGCCACACTCCAGAGGCCTGCAGGCTCAATCCACATTCCAACCCTAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS TCA 72 bp ATGGCCTGCAGCTGGGCGACTAGGCTGTTGCTCCGCTaGGCCTCGCTGTTCAGTTGCTGGTCCAGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: MACSWATRLLLR*ASLFSCWSRWC
Trigger: GCACCACCTGGACCAGCAACTGAACAGCGAGGCTCAGCGGAGCAACAGCCTAGTCGCCCAGCTGCAGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 72 bp AACTCGGTGAGCCGGTCACGCTCCACCTCGGCAGCCTaGCAGAGGGCCTTGATCTCTGACACTTGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: NSVSRSRSTSAA*QRALISDTCAC
Trigger: GCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGAGCGTGACCGGCTCACCGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CAA 90 bp TCGGTGAGCCGGTCACGCTCCACCTCGGCAGCCTGCCAGAGGGCCTaGATCTCTGACACTTGTGCCTGCCAGCCTTTTTGTTCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: SVSRSRSTSAACQRA*ISDTCACQPFCSGE
Trigger: CTCCCCAGAACAAAAAGGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGAGCGTGACCGGCTCACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CAA 90 bp CTCCACTCTGGAATGTGCTTTGGAGGCCTAGGGTTGGAATGTGGATaGAGCCTGCAGGCCTCTGGAGTGTGGCTCGGGCTTGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: LHSGMCFGGLGLECG*SLQASGVWLGLGPP
Trigger: GGGCGGCCCAAGCCCGAGCCACACTCCAGAGGCCTGCAGGCTCAATCCACATTCCAACCCTAGGCCTCCAAAGCACATTCCAGAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS CCA 72 bp CAAGACCTGAGGCTGCCCACCCGGCCAGGCCGACACTaGGCTGTCATCCTATTGCTTGCCTGTCTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: QDLRLPTRPGRH*AVILLLACLLL
Trigger: CAGCAGAAGACAGGCAAGCAATAGGATGACAGCCCAGTGTCGGCCTGGCCGGGTGGGCAGCCTCAGGTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 72 bp CTGGTCACAGAGCGAGAAGATCCAAGCCTGCCAACATaGTCGCCTGCTGAGGCCGGGGACTTGGTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LVTEREDPSLPT*SPAEAGDLVRP
Trigger: AGGCCTGACCAAGTCCCCGGCCTCAGCAGGCGATCATGTTGGCAGGCTTGGATCTTCTCGCTCTGTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000472921.1
CDS CCA 72 bp GGATTCCACGGGCACATCGGAGAGCTGGGCAAAGGATaGGTCCTTCTTCTCGCTCCCGGTTGGGTTGTGCCT +
Preference number: 6 (lower is better)
Translates to: GFHGHIGELGKG*VLLLAPGWVVP
Trigger: AGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCTCTCCGATGTGCCCGTGGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS CAA 72 bp CGGTCACGCTCCACCTCGGCAGCCTGCCAGAGGGCCTaGATCTCTGACACTTGTGCCTGCCAGCCTTTTTGT +
Preference number: 6 (lower is better)
Translates to: RSRSTSAACQRA*ISDTCACQPFC
Trigger: ACAAAAAGGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGAGCGTGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 72 bp GTTTGGCTCCCCTGCGTGGAGAAGGCTGAGGCCATCTaGAACCTCCAAGGGCTCCTCTTGGTCGTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: VWLPCVEKAEAI*NLQGLLLVVSS
Trigger: AGAGCTGACGACCAAGAGGAGCCCTTGGAGGTTTCAGATGGCCTCAGCCTTCTCCACGCAGGGGAGCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS TCA 72 bp CTCCACCTCGGCAGCCTGCCAGAGGGCCTTGATCTCTaGCACTTGTGCCTGCCAGCCTTTTTGTTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: LHLGSLPEGLDL*HLCLPAFLFWG
Trigger: TCCCCAGAACAAAAAGGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS TCA 72 bp GGTCACGCTCCACCTCGGCAGCCTGCCAGAGGGCCTTaGTCTCTGACACTTGTGCCTGCCAGCCTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: GHAPPRQPARGP*SLTLVPASLFV
Trigger: AACAAAAAGGCTGGCAGGCACAAGTGTCAGAGATCAAGGCCCTCTGGCAGGCTGCCGAGGTGGAGCGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 72 bp TCCTGCAGACTCAGGCTGCCTAGGATCTCCTGTAGCTaGTTCAGCTGGTCCATGAGGGCGTCGATGAGCTCG +
Preference number: 6 (lower is better)
Translates to: SCRLRLPRISCS*FSWSMRASMSS
Trigger: CGAGCTCATCGACGCCCTCATGGACCAGCTGAAGCAGCTACAGGAGATCCTAGGCAGCCTGAGTCTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 72 bp GGCGTATCTTCTCCAGATGTTGCTCCAGCACCACGGTaGGGTGTCGCTCCTCCTGCAGCTTCCTCTCTGACT +
Preference number: 6 (lower is better)
Translates to: GVSSPDVAPAPR*GVAPPAASSLT
Trigger: AGTCAGAGAGGAAGCTGCAGGAGGAGCGACACCGCACCGTGGTGCTGGAGCAACATCTGGAGAAGATACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000466031.5
ENST00000472921.1
CDS CCA 72 bp TGCTGCCGCAGGGCCTGCAGGAAGACACTTTTCACCTaGCCCAGGATCTCATGGTACATCCGGAAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: CCRRACRKTLFT*PRISWYIRKSS
Trigger: GGAGGACTTCCGGATGTACCATGAGATCCTGGGCCAGGTGAAAAGTGTCTTCCTGCAGGCCCTGCGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 72 bp GCGACTCTGCCCACCAAATGGTTATGGACCAAGGGCTaGTGGGAGGAAGGACTGGAACTGGAGCCTGACCCA +
Preference number: 6 (lower is better)
Translates to: ATLPTKWLWTKG*WEEGLELEPDP
Trigger: TGGGTCAGGCTCCAGTTCCAGTCCTTCCTCCCACCAGCCCTTGGTCCATAACCATTTGGTGGGCAGAGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS CAA 90 bp CTGGTCAGGGCTGTCTGCAGTTCCCGCTCCAGCTCCTGGATGCGATaGGTCAGCTGCTTCACCCTGGTTTTTGCACCCTCTGATTCTGCC +
Preference number: 6 (lower is better)
Translates to: LVRAVCSSRSSSWMR*VSCFTLVFAPSDSA
Trigger: GGCAGAATCAGAGGGTGCAAAAACCAGGGTGAAGCAGCTGACCAATCGCATCCAGGAGCTGGAGCGGGAACTGCAGACAGCCCTGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CAA 90 bp GAGAGCTGGGCAAAGGATGGGTCCTTCTTCTCGCTCCCGGTTGGGTaGTGCCTGTTGTTAGAGGTGGGCAGACCTGTTTTGGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: ESWAKDGSFFSLPVG*CLLLEVGRPVLVLG
Trigger: TCCCAGGACCAAAACAGGTCTGCCCACCTCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS TCA 72 bp CGACCCCTCCAGGTCCCTGGCGAAGATAGGAGCTGCTaGACGTTGATGTCTTCCCCAACCTCTCTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: RPLQVPGEDRSC*TLMSSPTSLAK
Trigger: TTTGGCCAGAGAGGTTGGGGAAGACATCAACGTTCAGCAGCTCCTATCTTCGCCAGGGACCTGGAGGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000479576.5
CDS GCA 72 bp TCAGGGCTGTCTGCAGTTCCCGCTCCAGCTCCTGGATaGGATTGGTCAGCTGCTTCACCCTGGTTTTTGCAC +
Preference number: 6 (lower is better)
Translates to: SGLSAVPAPAPG*DWSAASPWFLH
Trigger: GTGCAAAAACCAGGGTGAAGCAGCTGACCAATCGCATCCAGGAGCTGGAGCGGGAACTGCAGACAGCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS GCA 72 bp GGGACACTCGCGTTTTCTCCTCCTGCAGACTCAGGCTaGCTAGGATCTCCTGTAGCTGCTTCAGCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: GTLAFSPPADSG*LGSPVAASAGP
Trigger: TGGACCAGCTGAAGCAGCTACAGGAGATCCTAGGCAGCCTGAGTCTGCAGGAGGAGAAAACGCGAGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 72 bp CTGTCTGCAGTTCCCGCTCCAGCTCCTGGATGCGATTaGTCAGCTGCTTCACCCTGGTTTTTGCACCCTCTG +
Preference number: 6 (lower is better)
Translates to: LSAVPAPAPGCD*SAASPWFLHPL
Trigger: CAGAGGGTGCAAAAACCAGGGTGAAGCAGCTGACCAATCGCATCCAGGAGCTGGAGCGGGAACTGCAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp GGATCTGGTTTCGGAGGTCACTCATCTTCAAGTTGGTaGCCACCAGCCTGTCCTGCAGGGCCTTCACCTCTG +
Preference number: 6 (lower is better)
Translates to: GSGFGGHSSSSW*PPACPAGPSPL
Trigger: CAGAGGTGAAGGCCCTGCAGGACAGGCTGGTGGCCACCAACTTGAAGATGAGTGACCTCCGAAACCAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp CTGGGCAAAGGATGGGTCCTTCTTCTCGCTCCCGGTTaGGTTGTGCCTGTTGTTAGAGGTGGGCAGACCTGT +
Preference number: 6 (lower is better)
Translates to: LGKGWVLLLAPG*VVPVVRGGQTC
Trigger: ACAGGTCTGCCCACCTCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS CAA 72 bp GCTGTCTGCAGTTCCCGCTCCAGCTCCTGGATGCGATaGGTCAGCTGCTTCACCCTGGTTTTTGCACCCTCT +
Preference number: 6 (lower is better)
Translates to: AVCSSRSSSWMR*VSCFTLVFAPS
Trigger: AGAGGGTGCAAAAACCAGGGTGAAGCAGCTGACCAATCGCATCCAGGAGCTGGAGCGGGAACTGCAGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS CAA 72 bp GGCTGTTCCCGCAGACTGGCTCCGGGCCTGGCCCAATaGCTTCTCAAGCTCTTGAACCTTGCTCTGCAAAAC +
Preference number: 6 (lower is better)
Translates to: GCSRRLAPGLAQ*LLKLLNLALQN
Trigger: GTTTTGCAGAGCAAGGTTCAAGAGCTTGAGAAGCAATTGGGCCAGGCCCGGAGCCAGTCTGCGGGAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CAA 72 bp GGGTCCTTCTTCTCGCTCCCGGTTGGGTTGTGCCTGTaGTTAGAGGTGGGCAGACCTGTTTTGGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GSFFSLPVGLCL*LEVGRPVLVLG
Trigger: TCCCAGGACCAAAACAGGTCTGCCCACCTCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS TCA 72 bp GCCGGCCCTTCTCCACCAGGGTTCCCATCTGACTCTTaGGGGTCTTCATCTCACTTGACAGCAGCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: AGPSPPGFPSDS*GSSSHLTAACS
Trigger: GGAACAAGCTGCTGTCAAGTGAGATGAAGACCCTCAAGAGTCAGATGGGAACCCTGGTGGAGAAGGGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 72 bp TCTTCCATTTGGGATTCCACGGGCACATCGGAGAGCTaGGCAAAGGATGGGTCCTTCTTCTCGCTCCCGGTT +
Preference number: 6 (lower is better)
Translates to: SSIWDSTGTSES*AKDGSFFSLPV
Trigger: AACCGGGAGCGAGAAGAAGGACCCATCCTTTGCCCAGCTCTCCGATGTGCCCGTGGAATCCCAAATGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 72 bp TGCAGGAAGACACTTTTCACCTGGCCCAGGATCTCATaGTACATCCGGAAGTCCTCCTCCTTTCCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: CRKTLFTWPRIS*YIRKSSSFPRR
Trigger: CCTGCGGGGAAAGGAGGAGGACTTCCGGATGTACCATGAGATCCTGGGCCAGGTGAAAAGTGTCTTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 72 bp AGCCCCAAGCAGAGGGAAGGGTGTTCAGCTCCACTCTaGAATGTGCTTTGGAGGCCTAGGGTTGGAATGTGG +
Preference number: 6 (lower is better)
Translates to: SPKQREGCSAPL*NVLWRPRVGMW
Trigger: CCACATTCCAACCCTAGGCCTCCAAAGCACATTCCAGAGTGGAGCTGAACACCCTTCCCTCTGCTTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS CCA 72 bp CAGAGCAAGCAGTGTGCTCAAGGGACTGAGCACTCATaGCTCCAGAAAGGAATCCACTGTGCCAGCCGTGCT +
Preference number: 6 (lower is better)
Translates to: QSKQCAQGTEHS*LQKGIHCASRA
Trigger: AGCACGGCTGGCACAGTGGATTCCTTTCTGGAGCCATGAGTGCTCAGTCCCTTGAGCACACTGCTTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492806.5
CDS TCA 72 bp TCATCATGCCGGCCCTTCTCCACCAGGGTTCCCATCTaGCTCTTGAGGGTCTTCATCTCACTTGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSCRPFSTRVPI*LLRVFISLDSS
Trigger: GCTGCTGTCAAGTGAGATGAAGACCCTCAAGAGTCAGATGGGAACCCTGGTGGAGAAGGGCCGGCATGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 72 bp TCTCTGGCCAAAACCTTCTGTGCCATCCGCAGCTCCTaGTTCACAGACTGGATCTGGTTTCGGAGGTCACTC +
Preference number: 6 (lower is better)
Translates to: SLAKTFCAIRSS*FTDWIWFRRSL
Trigger: GAGTGACCTCCGAAACCAGATCCAGTCTGTGAAGCAGGAGCTGCGGATGGCACAGAAGGTTTTGGCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000479576.5
CDS GCA 72 bp AAGGATGGGTCCTTCTTCTCGCTCCCGGTTGGGTTGTaGCTGTTGTTAGAGGTGGGCAGACCTGTTTTGGTC +
Preference number: 6 (lower is better)
Translates to: KDGSFFSLPVGL*LLLEVGRPVLV
Trigger: GACCAAAACAGGTCTGCCCACCTCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS CCA 72 bp TGTGCCATCCGCAGCTCCTGCTTCACAGACTGGATCTaGTTTCGGAGGTCACTCATCTTCAAGTTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: CAIRSSCFTDWI*FRRSLIFKLVA
Trigger: GGCCACCAACTTGAAGATGAGTGACCTCCGAAACCAGATCCAGTCTGTGAAGCAGGAGCTGCGGATGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000479576.5
ENST00000492806.5
CDS CCA 72 bp ACAAGCAGCCGCCTGAACTTTTCAGTGTCGCTGCAATaGGTGGGTCTTTCTCTGGCCTCTCTGAGCACCTCA +
Preference number: 6 (lower is better)
Translates to: TSSRLNFSVSLQ*VGLSLASLSTS
Trigger: TGAGGTGCTCAGAGAGGCCAGAGAAAGACCCACCCATTGCAGCGACACTGAAAAGTTCAGGCGGCTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482100.1
CDS CAA 72 bp GCAAAGGATGGGTCCTTCTTCTCGCTCCCGGTTGGGTaGTGCCTGTTGTTAGAGGTGGGCAGACCTGTTTTG +
Preference number: 6 (lower is better)
Translates to: AKDGSFFSLPVG*CLLLEVGRPVL
Trigger: CAAAACAGGTCTGCCCACCTCTAACAACAGGCACAACCCAACCGGGAGCGAGAAGAAGGACCCATCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310232.11
ENST00000466031.5
CDS TCA 72 bp TATTTTTCGAGTTTGGCTCCCCTGCGTGGAGAAGGCTaGGGCCATCTGAAACCTCCAAGGGCTCCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: YFSSLAPLRGEG*GHLKPPRAPLG
Trigger: ACCAAGAGGAGCCCTTGGAGGTTTCAGATGGCCTCAGCCTTCTCCACGCAGGGGAGCCAAACTCGAAAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS TCA 72 bp GACTCACTCACCTTGCTCTGCAAAACAAGAATTTGTTaGGCCCGACCCCTCCAGGTCCCTGGCGAAGATAGG +
Preference number: 6 (lower is better)
Translates to: DSLTLLCKTRIC*ARPLQVPGEDR
Trigger: CCTATCTTCGCCAGGGACCTGGAGGGGTCGGGCTCAACAAATTCTTGTTTTGCAGAGCAAGGTGAGTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479576.5
CDS GCA 72 bp TTCCAGGCTGCGGATCCTCAGCAGGTTTTTCTCCTGTaGCGACAGCTTCCTTGGGTCTGGATAGACAGACAA +
Preference number: 6 (lower is better)
Translates to: FQAADPQQVFLL*RQLPWVWIDRQ
Trigger: TTGTCTGTCTATCCAGACCCAAGGAAGCTGTCGGCACAGGAGAAAAACCTGCTGAGGATCCGCAGCCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS GCA 72 bp AGCAGAGGGAAGGGTGTTCAGCTCCACTCTGGAATGTaGTTTGGAGGCCTAGGGTTGGAATGTGGATTGAGC +
Preference number: 6 (lower is better)
Translates to: SRGKGVQLHSGM*FGGLGLECGLS
Trigger: GCTCAATCCACATTCCAACCCTAGGCCTCCAAAGCACATTCCAGAGTGGAGCTGAACACCCTTCCCTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435327.2
CDS CAA 72 bp CCTGGATGCGATTGGTCAGCTGCTTCACCCTGGTTTTaGCACCCTCTGATTCTGCCATCAACAGCCGGTTCT +
Preference number: 6 (lower is better)
Translates to: PGCDWSAASPWF*HPLILPSTAGS
Trigger: AGAACCGGCTGTTGATGGCAGAATCAGAGGGTGCAAAAACCAGGGTGAAGCAGCTGACCAATCGCATCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000479576.5
ENST00000492806.5
CDS TCA 72 bp GGTTCCCATCTGACTCTTGAGGGTCTTCATCTCACTTaGCAGCAGCTTGTTCCGAGACCTCATGCCCTCGAA +
Preference number: 6 (lower is better)
Translates to: GSHLTLEGLHLT*QQLVPRPHALE
Trigger: TTCGAGGGCATGAGGTCTCGGAACAAGCTGCTGTCAAGTGAGATGAAGACCCTCAAGAGTCAGATGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CCA 72 bp AGGCTGAGGCCATCTGAAACCTCCAAGGGCTCCTCTTaGTCGTCAGCTCTGCTTTTGAGGCTCAGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: RLRPSETSKGSS*SSALLLRLSSF
Trigger: AAAAGAACTGAGCCTCAAAAGCAGAGCTGACGACCAAGAGGAGCCCTTGGAGGTTTCAGATGGCCTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS CCA 72 bp TTCTCAAAGCTATTTTTCGAGTTTGGCTCCCCTGCGTaGAGAAGGCTGAGGCCATCTGAAACCTCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: FSKLFFEFGSPA*RRLRPSETSKG
Trigger: GCCCTTGGAGGTTTCAGATGGCCTCAGCCTTCTCCACGCAGGGGAGCCAAACTCGAAAAATAGCTTTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS CCA 72 bp CCTCAGCAGGTTTTTCTCCTGTGCCGACAGCTTCCTTaGGTCTGGATAGACAGACAACTCATCACTGGCTGT +
Preference number: 6 (lower is better)
Translates to: PQQVFLLCRQLP*VWIDRQLITGC
Trigger: ACAGCCAGTGATGAGTTGTCTGTCTATCCAGACCCAAGGAAGCTGTCGGCACAGGAGAAAAACCTGCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CAA 72 bp TCCTCAGCAGGTTTTTCTCCTGTGCCGACAGCTTCCTaGGGTCTGGATAGACAGACAACTCATCACTGGCTG +
Preference number: 6 (lower is better)
Translates to: SSAGFSPVPTAS*GLDRQTTHHWL
Trigger: CAGCCAGTGATGAGTTGTCTGTCTATCCAGACCCAAGGAAGCTGTCGGCACAGGAGAAAAACCTGCTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310232.11
CDS CAA 90 bp TCCATCTGCTTCTGTAACCGTTTGTGCTGCATCTCCTGCATTGCCTaGAACTGGAGCCGCAAAGTGTTCTGTGAGCTTTCATCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SICFCNRLCCISCIA*NWSRKVFCELSSAA
Trigger: GGCAGCAGATGAAAGCTCACAGAACACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTTACAGAAGCAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS GCA 72 bp TCCCTCTTTTTCTCCATCTGCTTCTGTAACCGTTTGTaGTGCATCTCCTGCATTGCCTTGAACTGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: SLFFSICFCNRL*CISCIALNWSR
Trigger: GCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTTACAGAAGCAGATGGAGAAAAAGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS GCA 72 bp GTTCAGGCCAGGAGAAGTCTGATGACTCACTCACCTTaGTCTGCAAAACAAGAATTTGTTGAGCCCGACCCC +
Preference number: 6 (lower is better)
Translates to: VQARRSLMTHSP*SAKQEFVEPDP
Trigger: GGGGTCGGGCTCAACAAATTCTTGTTTTGCAGAGCAAGGTGAGTGAGTCATCAGACTTCTCCTGGCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479576.5
CDS CCA 72 bp AACCGTTTGTGCTGCATCTCCTGCATTGCCTTGAACTaGAGCCGCAAAGTGTTCTGTGAGCTTTCATCTGCT +
Preference number: 6 (lower is better)
Translates to: NRLCCISCIALN*SRKVFCELSSA
Trigger: AGCAGATGAAAGCTCACAGAACACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS TCA 72 bp TCTGTAACCGTTTGTGCTGCATCTCCTGCATTGCCTTaGACTGGAGCCGCAAAGTGTTCTGTGAGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: SVTVCAASPALP*TGAAKCSVSFH
Trigger: ATGAAAGCTCACAGAACACTTTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS GCA 72 bp CTCTTTTTCTCCATCTGCTTCTGTAACCGTTTGTGCTaGATCTCCTGCATTGCCTTGAACTGGAGCCGCAAA +
Preference number: 6 (lower is better)
Translates to: LFFSICFCNRLC*ISCIALNWSRK
Trigger: TTTGCGGCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTTACAGAAGCAGATGGAGAAAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS TCA 72 bp GCTTATACAATCGCCCGTTCTCGTCCACCGTTTCCCTaGGCTCATTTCGAAGGTGTTCAATCTCATCTTCAA +
Preference number: 6 (lower is better)
Translates to: AYTIARSRPPFP*AHFEGVQSHLQ
Trigger: TTGAAGATGAGATTGAACACCTTCGAAATGAGCTCAGGGAAACGGTGGACGAGAACGGGCGATTGTATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS CAA 72 bp TTTTCCCTCTTTTTCTCCATCTGCTTCTGTAACCGTTaGTGCTGCATCTCCTGCATTGCCTTGAACTGGAGC +
Preference number: 6 (lower is better)
Translates to: FSLFFSICFCNR*CCISCIALNWS
Trigger: GCTCCAGTTCAAGGCAATGCAGGAGATGCAGCACAAACGGTTACAGAAGCAGATGGAGAAAAAGAGGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310232.11
ENST00000435327.2
ENST00000492806.5
CDS CAA 72 bp GTTCTCTCCAAAGCACAGTGGTTTTGTCAGAGGCGTTaGAACAAGAGCAACTCCATCTTAAATAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VLSKAQWFCQRR*NKSNSILNRSW
Trigger: CCAGCTCCTATTTAAGATGGAGTTGCTCTTGTTCAAACGCCTCTGACAAAACCACTGTGCTTTGGAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482100.1
CDS CAA 72 bp TGTTATTGCATAATACCACAACCATCCACCGCCATGTaGTTCTCTCCAAAGCACAGTGGTTTTGTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CYCIIPQPSTAM*FSPKHSGFVRG
Trigger: GCCTCTGACAAAACCACTGTGCTTTGGAGAGAACAACATGGCGGTGGATGGTTGTGGTATTATGCAATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482100.1
CDS GCA 72 bp CAGCTAAAAATGGGTTTGGCACTCCGGGATGTTAACTaGTATTCTCTTTGGATTAATCTGTCTTGCACTCTT +
Preference number: 6 (lower is better)
Translates to: QLKMGLALRDVN*YSLWINLSCTL
Trigger: AAGAGTGCAAGACAGATTAATCCAAAGAGAATAGCAGTTAACATCCCGGAGTGCCAAACCCATTTTTAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482100.1