RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC125 (Homo sapiens)

Ensembl gene IDs: ENSG00000183323, ENSG00000277868

Ensembl transcript IDs: ENST00000383374.6, ENST00000396496.7, ENST00000396499.5, ENST00000460090.5, ENST00000511257.1, ENST00000512045.5, ENST00000513172.1, ENST00000610685.4, ENST00000611691.4, ENST00000612469.4, ENST00000615018.4, ENST00000619386.1, ENST00000620431.4, ENST00000621007.1

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTaGATTCTCTCTCTCAGGTGTACTGTCTGTTCTGCACCTAACTTT +
Preference number: 1 (lower is better)
Translates to: SSNNQCCLTLTSSRP*ILSLRCTVCSAPNF
Trigger: AAAGTTAGGTGCAGAACAGACAGTACACCTGAGAGAGAGAATTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
3UTR TCA 90 bp TGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATaGACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCA +
Preference number: 1 (lower is better)
Translates to: CADLVAKCYYPDKKP*TQPALTQYTSAKVP
Trigger: TGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR TCA 90 bp AAACTCCTAGAAATCACCTTGGCTCAGGCAGCTTCTTCAGATTCCTaGGACCCCATTTCCTGGATCATCACAACCATCTCACAGGATGCA +
Preference number: 1 (lower is better)
Translates to: KLLEITLAQAASSDS*DPISWIITTISQDA
Trigger: TGCATCCTGTGAGATGGTTGTGATGATCCAGGAAATGGGGTCTCAGGAATCTGAAGAAGCTGCCTGAGCCAAGGTGATTTCTAGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR TCA 90 bp CAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCCGGCACTaGCTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTT +
Preference number: 1 (lower is better)
Translates to: QNVTTLTRSHERSRH*LNILLPRSHHQNCL
Trigger: AAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR TCA 90 bp TTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTaGCAAGAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTC +
Preference number: 1 (lower is better)
Translates to: LATNLCRFGCKMLLP*QEAMNAAGTDSIYF
Trigger: GAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR TCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAATCCTGCCTCAGCCCCTaGGTAGCTGGGACAACAGGT +
Preference number: 2 (lower is better)
Translates to: VSPAIINAVSPLRAAGPESCLSP*VAGTTG
Trigger: ACCTGTTGTCCCAGCTACTCAGGGGCTGAGGCAGGA...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
3UTR-3UTR TCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCAACTCCAGCCTCAGGTaGCCCACCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSNSSLR*PTHLGL
Trigger: GAGGCCAAGGTGGGTGGGTCACCTGAGGCTGGAGTT...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
3UTR-3UTR TCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAATGGTCAGACTGGTCTTaGACTCCAGCCTCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: VSPAIINAVSPLRAAGPEWSDWS*TPASGD
Trigger: GTCACCTGAGGCTGGAGTTCAAGACCAGTCTGACCA...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
3UTR-3UTR TCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCCAGGCTGGAGTGCAATaGCACAGTCTCGGCTTACCA +
Preference number: 2 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSQAGVQ*HSLGLP
Trigger: TGGTAAGCCGAGACTGTGTCATTGCACTCCAGCCTG...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR GCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAACTGAGGCAGGAGAATTaGTTGAACCGGGAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: SYTAAISSHLRYLCASLQLRQEN*LNREAE
Trigger: CTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCTCAG...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
3UTR-3UTR GCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGTCTTTGTCTTCCAATaGCCGAGCAAGCATGTAGCT +
Preference number: 2 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGVFVFQ*PSKHVA
Trigger: AGCTACATGCTTGCTCGGGCATTGGAAGACAAAGAC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
3UTR-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTGAGGCAGGAGAATTaGTTGAACCGGGAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: LFSYTAAISSHLRYLCASLRQEN*LNREAE
Trigger: CTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCTCAG...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
3UTR-3UTR GCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGCTGAGGCAGGAGAATTaGTTGAACCGGGAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKLRQEN*LNREAE
Trigger: CTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCTCAG...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR GCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTCGCCCAGGCTGGAGTaGAATGACACAGTCTCGGCT +
Preference number: 2 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKSPRLE*NDTVSA
Trigger: AGCCGAGACTGTGTCATTGCACTCCAGCCTGGGCGA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTTCTTTATTCTCGTTTaGAGCAGTGTCTTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGFFILV*SSVFVF
Trigger: GAAGACAAAGACACTGCTTCAAACGAGAATAAAGAA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
3UTR-3UTR GCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTGTCTTTGTCTTCCAATaGCCGAGCAAGCATGTAGCT +
Preference number: 2 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSVFVFQ*PSKHVA
Trigger: AGCTACATGCTTGCTCGGGCATTGGAAGACAAAGAC...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
3UTR-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAAAAAATGTTACTACCCTaGCAAGAAGCCATGAACGCA +
Preference number: 2 (lower is better)
Translates to: SYTAAISSHLRYLCASLQKMLLP*QEAMNA
Trigger: TGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTT...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
3UTR-3UTR GCA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAGACTCAATATACTTCTaGCAAGGTCCCACCATCAAA +
Preference number: 2 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTDSIYF*QGPTIK
Trigger: TTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTC...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR CAA 90 bp ATCTCACAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTaGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCC +
Preference number: 2 (lower is better)
Translates to: ISQDAMKRAVKHFVD*ATNLCRFGCKMLLP
Trigger: GGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTGTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTTCTTTATTCTCGTTTaGAGCAGTGTCTTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSFFILV*SSVFVF
Trigger: GAAGACAAAGACACTGCTTCAAACGAGAATAAAGAA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
3UTR-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCTTGGCTACAAATCTGTaGAGATTTGGTTGCAAAATG +
Preference number: 2 (lower is better)
Translates to: LFSYTAAISSHLRYLCASLATNL*RFGCKM
Trigger: CATTTTGCAACCAAATCTGCACAGATTTGTAGCCAA...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
3UTR TCA 72 bp CCCAGGCTGGTCTTGAACTCTGGACTGGTCTGGACTTaGGATTCAGACCAGATCTGTAAGCCACTGCACCCG +
Preference number: 3 (lower is better)
Translates to: PRLVLNSGLVWT*DSDQICKPLHP
Trigger: CGGGTGCAGTGGCTTACAGATCTGGTCTGAATCTCAAGTCCAGACCAGTCCAGAGTTCAAGACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
3UTR-3UTR CAA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATAGGCAGGAGAATTGCTaGAACCGGGAGGCGGAGGTT +
Preference number: 3 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYRQENC*NREAEV
Trigger: AACCTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCT...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR CAA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCAGGCAGGAGAATTGCTaGAACCGGGAGGCGGAGGTT +
Preference number: 3 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSRQENC*NREAEV
Trigger: AACCTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCT...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR TCA 72 bp ACTACCCTGACAAGAAGCCATGAACGCAGCCGGCACTaGCTCAATATACTTCTGCCAAGGTCCCACCATCAA +
Preference number: 3 (lower is better)
Translates to: TTLTRSHERSRH*LNILLPRSHHQ
Trigger: TTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGGGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR TCA 72 bp AATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTaGATTCTCTCTCTCAGGTGTACTGTCTGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: NQCCLTLTSSRP*ILSLRCTVCSA
Trigger: TGCAGAACAGACAGTACACCTGAGAGAGAGAATTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
3UTR GCA 72 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTaGCAAGGTCCCACCATCAAAACTGTCTTATTGAAG +
Preference number: 3 (lower is better)
Translates to: AMNAAGTDSIYF*QGPTIKTVLLK
Trigger: CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR CAA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGAGGCAGGAGAATTGCTaGAACCGGGAGGCGGAGGTT +
Preference number: 3 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRRQENC*NREAEV
Trigger: AACCTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCT...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR TCA 72 bp TTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATaGACGCAGCCGGCACTGACTCAATATACTTCTGCC +
Preference number: 3 (lower is better)
Translates to: LVAKCYYPDKKP*TQPALTQYTSA
Trigger: GGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR TCA 72 bp AATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTaGCAAGAAGCCATGAACGCAGCCGGCACTGACTCA +
Preference number: 3 (lower is better)
Translates to: NLCRFGCKMLLP*QEAMNAAGTDS
Trigger: TGAGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTTTGAAGCAGTGTCTTaGTCTTCCAATGCCCGAGCA +
Preference number: 3 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSFEAVS*SSNARA
Trigger: TGCTCGGGCATTGGAAGACAAAGACACTGCTTCAAA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
3UTR-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTGTAGCTAACTTTTCTTaGATGAGCCAAAGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSVANFS*MSQSFF
Trigger: GAAGAAGCTTTGGCTCATCAAAGAAAAGTTAGCTAC...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
3UTR TCA 72 bp AGCCAACACAATAAACCTCAGCATTCACATTGTAATTaGGCTCATTTAAGCAAAGCTATCTTCAGTAGGGAC +
Preference number: 3 (lower is better)
Translates to: SQHNKPQHSHCN*AHLSKAIFSRD
Trigger: GTCCCTACTGAAGATAGCTTTGCTTAAATGAGCTCAATTACAATGTGAATGCTGAGGTTTATTGTGTTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGTAGCCTCCTCTCCGTaGGCGTGCGCCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGVASSP*ACAAAA
Trigger: GGCGGCAGCGGCGCACGCGCACGGAGAGGAGGCTAC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCGTAGCCTCCTCTCCGTaGGCGTGCGCCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFVASSP*ACAAAA
Trigger: GGCGGCAGCGGCGCACGCGCACGGAGAGGAGGCTAC...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCAGCACTGCCTGCGTATaGCTTGTGGCTTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTSTACV*LVALPS
Trigger: ACTGGGCAAAGCCACAAGTCATACGCAGGCAGTGCT...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCCAGGCTGGAGTGCAATaGCACAGTCTCGGCTTACCA +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTIQAGVQ*HSLGLP
Trigger: TGGTAAGCCGAGACTGTGTCATTGCACTCCAGCCTG...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCCTGCCTCAGCCCCTaGGTAGCTGGGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLSCLSP*VAGTTG
Trigger: ACCTGTTGTCCCAGCTACTCAGGGGCTGAGGCAGGA...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCGAACGCAGCCGGCACTaGCTCAATATACTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTERSRH*LNILLP
Trigger: TGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTC...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAACCTGACAAGAAGCCATaGACGCAGCCGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: VSPAIINAVSPLRAAGPEPDKKP*TQPALT
Trigger: AGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGG...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR CCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCTGGATGCTGCCATTCTaGCACAAGAACAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTIWMLPF*HKNRGS
Trigger: GGAACCCCTGTTCTTGTGCCAGAATGGCAGCATCCA...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCTGGATGCTGCCATTCTaGCACAAGAACAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTWMLPF*HKNRGS
Trigger: GGAACCCCTGTTCTTGTGCCAGAATGGCAGCATCCA...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCGAAGCAGTTTCCGAGTaGATGCTGCCATTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTEAVSE*MLPFWH
Trigger: GTGCCAGAATGGCAGCATCCACTCGGAAACTGCTTC...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCCCATCTTCTGCTGTTTaGTATCAAGCATGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTIPSSAV*YQAWRG
Trigger: CCCTCGCCATGCTTGATATCAAACAGCAGAAGATGG...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATGCTGTCTGCCAGGTCTaGCCCCGGGTACCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYAVCQV*PRVPSQ
Trigger: TTGAGAGGGTACCCGGGGTCAGACCTGGCAGACAGC...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCCAGTTTCCGAGTGGATaGTGCCATTCTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTQFPSG*CHSGTR
Trigger: TCTTGTGCCAGAATGGCAGCATCCACTCGGAAACTG...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGACAATCACAGCTCACTaGAGCCTCAAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLTITAH*SLKLLG
Trigger: GCCCAGGAGCTTGAGGCTGCAGTGAGCTGTGATTGT...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CCA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACACCCTCTCAAGGTCCGTaGCGGGGACCGGAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTPSQGP*RGPEPG
Trigger: TCCGGGCTCCGGTCCCCGCCACGGACCTTGAGAGGG...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCTTGCCACCTTGCTCATaGGCCAAATGCCGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTILPPCS*AKCRLY
Trigger: ATAAAGACGGCATTTGGCTCATGAGCAAGGTGGCAA...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCTTGCCACCTTGCTCATaGGCCAAATGCCGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTLPPCS*AKCRLY
Trigger: ATAAAGACGGCATTTGGCTCATGAGCAAGGTGGCAA...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCAACTCCAGCCTCAGGTaGCCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFNSSLR*PTHLGL
Trigger: GAGGCCAAGGTGGGTGGGTCACCTGAGGCTGGAGTT...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCTCTGTTTCCCAGAGCTaGACGTCTGACTCACTTGAT +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTSVSQS*TSDSLD
Trigger: ATCAAGTGAGTCAGACGTGCAGCTCTGGGAAACAGA...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCCCTCTGAGTTGTCTTTaGGATGCCTCAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTPLSCL*DASSSV
Trigger: AACTGAACTTGAGGCATCTCAAAGACAACTCAGAGG...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCCTTCCTCTTTACCTCTaGGTTGTCTTTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTILPLYL*VVFEMP
Trigger: AGGCATCTCAAAGACAACTCAGAGGTAAAGAGGAAG...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAGCACTGCCTGCGTATaGCTTGTGGCTTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGSTACV*LVALPS
Trigger: ACTGGGCAAAGCCACAAGTCATACGCAGGCAGTGCT...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCCTTAGAACTGTTTTCTaGAGGGAGCATACCCAACAG +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTILRTVF*REHTQQ
Trigger: CTGTTGGGTATGCTCCCTTCAGAAAACAGTTCTAAG...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTGGTCAGACTGGTCTTaGACTCCAGCCTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGWSDWS*TPASGD
Trigger: GTCACCTGAGGCTGGAGTTCAAGACCAGTCTGACCA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCAACTCTTGTTTGAGCTaGAGAAGCAGTTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTNSCLS*RSSFRV
Trigger: CACTCGGAAACTGCTTCTTCAGCTCAAACAAGAGTT...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCGCTCAAATGCAATTCTaGAAGCATCTGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTAQMQF*KHLPSR
Trigger: ACGTGATGGCAGATGCTTTCAGAATTGCATTTGAGC...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATCTGAGGCAGGAGAATTaGTTGAACCGGGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYLRQEN*LNREAE
Trigger: CTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCTCAG...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATAGCACTGCCTGCGTATaGCTTGTGGCTTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYSTACV*LVALPS
Trigger: ACTGGGCAAAGCCACAAGTCATACGCAGGCAGTGCT...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCGCCTCCAAATACCGTTaGTTCAAAACTGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTASKYR*FKTALS
Trigger: TGACAATGCAGTTTTGAATCAACGGTATTTGGAGGC...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCTACGCCAGGGGTTGTTaGAAGGGAAATTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTIYARGC*KGNSLL
Trigger: TAAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTA...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTTGAGAGTGCTGGATTaGACAAATGCAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLLRVLD*TNAAHR
Trigger: TCTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAA...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCAACTCCAGCCTCAGGTaGCCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASNSSLR*PTHLGL
Trigger: GAGGCCAAGGTGGGTGGGTCACCTGAGGCTGGAGTT...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCTGGTCAGACTGGTCTTaGACTCCAGCCTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSWSDWS*TPASGD
Trigger: GTCACCTGAGGCTGGAGTTCAAGACCAGTCTGACCA...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCCGCAAGCTCAAGACCTaGAGCCTCTGCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSRKLKT*SLCKAT
Trigger: AGTGGCTTTGCAGAGGCTTCAGGTCTTGAGCTTGCG...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATCGCAAGCTCAAGACCTaGAGCCTCTGCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYRKLKT*SLCKAT
Trigger: AGTGGCTTTGCAGAGGCTTCAGGTCTTGAGCTTGCG...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCTTTCCAACTCTTGTTTaGGCTGAAGAAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTIFPTLV*AEEAVS
Trigger: GGAAACTGCTTCTTCAGCTCAAACAAGAGTTGGAAA...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCCTTCTTACTCCTTGGTaGTGGAAATCCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTILLTPW*WKSILF
Trigger: AAAGAGGATGGATTTCCATCACCAAGGAGTAAGAAG...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAATTTCCGAGTGGATGCTaGCATTCTGGCACAAGAACA +
Preference number: 4 (lower is better)
Translates to: VSPAIINAVSPLRAAGPEFPSGC*HSGTRT
Trigger: TGTTCTTGTGCCAGAATGGCAGCATCCACTCGGAAA...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCGACTCAATATACTTCTaGCAAGGTCCCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTIDSIYF*QGPTIK
Trigger: TTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTC...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCACAATCACAGCTCACTaGAGCCTCAAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSTITAH*SLKLLG
Trigger: GCCCAGGAGCTTGAGGCTGCAGTGAGCTGTGATTGT...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCCATCTTCTGCTGTTTaGTATCAAGCATGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGPSSAV*YQAWRG
Trigger: CCCTCGCCATGCTTGATATCAAACAGCAGAAGATGG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGATCTTAAGGACCTCTTaGGGACTGTCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGILRTS*GLSWSS
Trigger: GGAAGACCAGGACAGTCCTCAAGAGGTCCTTAAGAT...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAACCTGACAAGAAGCCATaGACGCAGCCGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQPDKKP*TQPALT
Trigger: AGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGG...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCAATTCTGAAAGCATCTaGCATCACGTAAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTNSESI*HHVSFF
Trigger: GAAGAAGCTTACGTGATGGCAGATGCTTTCAGAATT...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCCTGCGTATGACTTGTaGCTTTGCCCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGPAYDL*LCPVLP
Trigger: TGGCAATACTGGGCAAAGCCACAAGTCATACGCAGG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGCTCAGCTCGCTCACCTaGCAAGTAGCCTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKLSSLT*QVASSP
Trigger: CGGAGAGGAGGCTACTTGCCAGGTGAGCGAGCTGAG...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCAGTATTGCCATGCTTTaGAGAATTTTCAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTSIAML*RIFNAS
Trigger: GGAAGCATTGAAAATTCTTCAAAGCATGGCAATACT...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCAGCACATGTTTTCCTaGGCCATCTTCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGQHMFS*AIFCCL
Trigger: CAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAATGGTCAGACTGGTCTTaGACTCCAGCCTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQWSDWS*TPASGD
Trigger: GTCACCTGAGGCTGGAGTTCAAGACCAGTCTGACCA...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGCCTGACAAGAAGCCATaGACGCAGCCGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKPDKKP*TQPALT
Trigger: AGTCAGTGCCGGCTGCGTTCATGGCTTCTTGTCAGG...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAAAAAATGTTACTACCCTaGCAAGAAGCCATGAACGCA +
Preference number: 4 (lower is better)
Translates to: VSPAIINAVSPLRAAGPEKMLLP*QEAMNA
Trigger: TGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTT...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR TCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCGGACTGGTCTGGACTTaGGATTCAGACCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSGLVWT*DSDQIC
Trigger: ACAGATCTGGTCTGAATCTCAAGTCCAGACCAGTCC...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGTCCTGCCTCAGCCCCTaGGTAGCTGGGACAACAGGT +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRSCLSP*VAGTTG
Trigger: ACCTGTTGTCCCAGCTACTCAGGGGCTGAGGCAGGA...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCAGAGCATACACATTTTaGTTTTACCTGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTRAYTF*FYLSSN
Trigger: GTTTGAGGACAGGTAAAATCAAAATGTGTATGCTCT...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTATGACTTGTGGCTTTaGCCAGTATTGCCATGCTTT +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLYDLWL*PVLPCF
Trigger: AAAGCATGGCAATACTGGGCAAAGCCACAAGTCATA...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCTGAGGCAGGAGAATTaGTTGAACCGGGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLRQEN*LNREAE
Trigger: CTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCTCAG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCTCGCCCAGGCTGGAGTaGAATGACACAGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASSPRLE*NDTVSA
Trigger: AGCCGAGACTGTGTCATTGCACTCCAGCCTGGGCGA...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGGACTCAATATACTTCTaGCAAGGTCCCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLDSIYF*QGPTIK
Trigger: TTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTC...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCCATTTAAGATATCTGTaGGCCAGCCTACAAGAAATA +
Preference number: 4 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTHLRYL*ASLQEI
Trigger: TATTTCTTGTAGGCTGGCGCACAGATATCTTAAATG...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATCCTGCGTATGACTTGTaGCTTTGCCCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYPAYDL*LCPVLP
Trigger: TGGCAATACTGGGCAAAGCCACAAGTCATACGCAGG...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCCTCTGAGTTGTCTTTaGGATGCCTCAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGPLSCL*DASSSV
Trigger: AACTGAACTTGAGGCATCTCAAAGACAACTCAGAGG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCTTCCTCTTTACCTCTaGGTTGTCTTTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGLPLYL*VVFEMP
Trigger: AGGCATCTCAAAGACAACTCAGAGGTAAAGAGGAAG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATCAGCACATGTTTTCCTaGGCCATCTTCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYQHMFS*AIFCCL
Trigger: CAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTG...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCTTAGAACTGTTTTCTaGAGGGAGCATACCCAACAG +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGLRTVF*REHTQQ
Trigger: CTGTTGGGTATGCTCCCTTCAGAAAACAGTTCTAAG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCATCTTAAGGACCTCTTaGGGACTGTCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFILRTS*GLSWSS
Trigger: GGAAGACCAGGACAGTCCTCAAGAGGTCCTTAAGAT...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCAAAACAGAGAATTCTaGAGTCTTACGCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGQNREF*SLTPGV
Trigger: AACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGGGACCACCCAGGACATaGTTACTGCAACACCTCACC +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKGPPRT*LLQHLT
Trigger: GGTGAGGTGTTGCAGTAATCATGTCCTGGGTGGTCC...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTCTGTTTCCCAGAGCTaGACGTCTGACTCACTTGAT +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYSVSQS*TSDSLD
Trigger: ATCAAGTGAGTCAGACGTGCAGCTCTGGGAAACAGA...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGCCGTTGATTCAAAACTaGATTGTCAGACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLPLIQN*IVRLQH
Trigger: ATGCTGAAGTCTGACAATGCAGTTTTGAATCAACGG...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGTCGCCCAGGCTGGAGTaGAATGACACAGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRSPRLE*NDTVSA
Trigger: AGCCGAGACTGTGTCATTGCACTCCAGCCTGGGCGA...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTTGCCACCTTGCTCATaGGCCAAATGCCGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLPPCS*AKCRLY
Trigger: ATAAAGACGGCATTTGGCTCATGAGCAAGGTGGCAA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAACTTTCAAATTCTCTTTaGGGACTGCATTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: VSPAIINAVSPLRAAGPELSNSL*GLHFHS
Trigger: ACTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAG...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGCCTCCAAATACCGTTaGTTCAAAACTGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGASKYR*FKTALS
Trigger: TGACAATGCAGTTTTGAATCAACGGTATTTGGAGGC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAACCATCTTCTGCTGTTTaGTATCAAGCATGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQPSSAV*YQAWRG
Trigger: CCCTCGCCATGCTTGATATCAAACAGCAGAAGATGG...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAAATCTTAAGGACCTCTTaGGGACTGTCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQILRTS*GLSWSS
Trigger: GGAAGACCAGGACAGTCCTCAAGAGGTCCTTAAGAT...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTTCTTTATTCTCGTTTaGAGCAGTGTCTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLFFILV*SSVFVF
Trigger: GAAGACAAAGACACTGCTTCAAACGAGAATAAAGAA...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTACGCCAGGGGTTGTTaGAAGGGAAATTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGYARGC*KGNSLL
Trigger: TAAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTTGAGAGTGCTGGATTaGACAAATGCAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLRVLD*TNAAHR
Trigger: TCTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCGCAAGCTCAAGACCTaGAGCCTCTGCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTRKLKT*SLCKAT
Trigger: AGTGGCTTTGCAGAGGCTTCAGGTCTTGAGCTTGCG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCATACCCAACAGTCTCTaGCCGAAGGTCTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFIPNSL*PKVFLL
Trigger: GAGTAAGAAGACCTTCGGGCAGAGACTGTTGGGTAT...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTCTGAGGCAGGAGAATTaGTTGAACCGGGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFLRQEN*LNREAE
Trigger: CTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCTCAG...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAACCATCCTCTTTAAGGTaGTTCCAATTCATCCATTTT +
Preference number: 4 (lower is better)
Translates to: VSPAIINAVSPLRAAGPEPSSLR*FQFIHF
Trigger: AAAATGGATGAATTGGAAGCACCTTAAAGAGGATGG...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTTCGCCCAGGCTGGAGTaGAATGACACAGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFSPRLE*NDTVSA
Trigger: AGCCGAGACTGTGTCATTGCACTCCAGCCTGGGCGA...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTTGGCTACAAATCTGTaGAGATTTGGTTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLLATNL*RFGCKM
Trigger: CATTTTGCAACCAAATCTGCACAGATTTGTAGCCAA...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAATGCAATAAATTATGCTaGATCTCCTTTGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VSPAIINAVSPLRAAGPECNKLC*ISFAVS
Trigger: TGAGACAGCAAAGGAGATGCAGCATAATTTATTGCA...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCCTTCCTCTTTACCTCTaGGTTGTCTTTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLPLYL*VVFEMP
Trigger: AGGCATCTCAAAGACAACTCAGAGGTAAAGAGGAAG...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCCTTAGAACTGTTTTCTaGAGGGAGCATACCCAACAG +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLRTVF*REHTQQ
Trigger: CTGTTGGGTATGCTCCCTTCAGAAAACAGTTCTAAG...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCTACGCCAGGGGTTGTTaGAAGGGAAATTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSYARGC*KGNSLL
Trigger: TAAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTA...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTCAGGCTGGAGTGCAATaGCACAGTCTCGGCTTACCA +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFQAGVQ*HSLGLP
Trigger: TGGTAAGCCGAGACTGTGTCATTGCACTCCAGCCTG...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGGCTTTGCCCAGTATTaGCATGCTTTGAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGGFAQY*HALKNF
Trigger: AAAATTCTTCAAAGCATGGCAATACTGGGCAAAGCC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCCGTTGATTCAAAACTaGATTGTCAGACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGPLIQN*IVRLQH
Trigger: ATGCTGAAGTCTGACAATGCAGTTTTGAATCAACGG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAATTTCCGAGTGGATGCTaGCATTCTGGCACAAGAACA +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQFPSGC*HSGTRT
Trigger: TGTTCTTGTGCCAGAATGGCAGCATCCACTCGGAAA...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCAGTTTCCGAGTGGATaGTGCCATTCTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASQFPSG*CHSGTR
Trigger: TCTTGTGCCAGAATGGCAGCATCCACTCGGAAACTG...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTCCCTTTCTCGGAAATaGAGGAGGGCTAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFSLSRK*RRAKVL
Trigger: AAGAACTTTAGCCCTCCTCCATTTCCGAGAAAGGGA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCCTGCGTATGACTTGTaGCTTTGCCCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSPAYDL*LCPVLP
Trigger: TGGCAATACTGGGCAAAGCCACAAGTCATACGCAGG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CCA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGAAGAGTTCTATAGTTTaGATCTATTTGAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLKSSIV*IYLRVL
Trigger: CAGCACTCTCAAATAGATCCAAACTATAGAACTCTT...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGTGGATGCTGCCATTCTaGCACAAGAACAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRWMLPF*HKNRGS
Trigger: GGAACCCCTGTTCTTGTGCCAGAATGGCAGCATCCA...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCGAAGCAGTTTCCGAGTaGATGCTGCCATTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTEAVSE*MLPFWH
Trigger: GTGCCAGAATGGCAGCATCCACTCGGAAACTGCTTC...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGGAAGCAGTTTCCGAGTaGATGCTGCCATTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLREAVSE*MLPFWH
Trigger: GTGCCAGAATGGCAGCATCCACTCGGAAACTGCTTC...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTTGCCACCTTGCTCATaGGCCAAATGCCGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLPPCS*AKCRLY
Trigger: ATAAAGACGGCATTTGGCTCATGAGCAAGGTGGCAA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAGTATTGCCATGCTTTaGAGAATTTTCAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGSIAML*RIFNAS
Trigger: GGAAGCATTGAAAATTCTTCAAAGCATGGCAATACT...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCGCCTCCAAATACCGTTaGTTCAAAACTGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFASKYR*FKTALS
Trigger: TGACAATGCAGTTTTGAATCAACGGTATTTGGAGGC...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCAGCACATGTTTTCCTaGGCCATCTTCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSQHMFS*AIFCCL
Trigger: CAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGCAGCACATGTTTTCCTaGGCCATCTTCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLQHMFS*AIFCCL
Trigger: CAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTG...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTTGAGAGTGCTGGATTaGACAAATGCAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLRVLD*TNAAHR
Trigger: TCTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCTTGAGAGTGCTGGATTaGACAAATGCAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASLRVLD*TNAAHR
Trigger: TCTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAA...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTGAGAGTGCTGGATTaGACAAATGCAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKLRVLD*TNAAHR
Trigger: TCTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAAGCTCAAATGCAATTCTaGAAGCATCTGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQAQMQF*KHLPSR
Trigger: ACGTGATGGCAGATGCTTTCAGAATTGCATTTGAGC...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGAACGCAGCCGGCACTaGCTCAATATACTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFERSRH*LNILLP
Trigger: TGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTC...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCCACCTCACCTCCTTATaGATAATAATGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSHLTSL*IIMQNS
Trigger: GGAGTTTTGCATTATTATTCATAAGGAGGTGAGGTG...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTCTGTTTCCCAGAGCTaGACGTCTGACTCACTTGAT +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSSVSQS*TSDSLD
Trigger: ATCAAGTGAGTCAGACGTGCAGCTCTGGGAAACAGA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCTGAATTCGAATCAGTaGTACTTTGTCGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGLNSNQ*YFVVCN
Trigger: ATTACAGACGACAAAGTAGCACTGATTCGAATTCAG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTGCCCAGTATTGCCATaGTTTGAAGAATTTTCAATG +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGCPVLP*FEEFSM
Trigger: CATTGAAAATTCTTCAAAGCATGGCAATACTGGGCA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATGGCTTTGCCCAGTATTaGCATGCTTTGAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYGFAQY*HALKNF
Trigger: AAAATTCTTCAAAGCATGGCAATACTGGGCAAAGCC...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTATACCCAACAGTCTCTaGCCGAAGGTCTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSIPNSL*PKVFLL
Trigger: GAGTAAGAAGACCTTCGGGCAGAGACTGTTGGGTAT...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGATACCCAACAGTCTCTaGCCGAAGGTCTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLIPNSL*PKVFLL
Trigger: GAGTAAGAAGACCTTCGGGCAGAGACTGTTGGGTAT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAATACCCAACAGTCTCTaGCCGAAGGTCTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTIPNSL*PKVFLL
Trigger: GAGTAAGAAGACCTTCGGGCAGAGACTGTTGGGTAT...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGGTCTTTGTCTTCCAATaGCCGAGCAAGCATGTAGCT +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLVFVFQ*PSKHVA
Trigger: AGCTACATGCTTGCTCGGGCATTGGAAGACAAAGAC...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTTCCGAGTGGATGCTaGCATTCTGGCACAAGAACA +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKFPSGC*HSGTRT
Trigger: TGTTCTTGTGCCAGAATGGCAGCATCCACTCGGAAA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGCAGTTTCCGAGTGGATaGTGCCATTCTGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRQFPSG*CHSGTR
Trigger: TCTTGTGCCAGAATGGCAGCATCCACTCGGAAACTG...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTTTGTCGTCTGTAATTaGAAATTCTGGACACTTGAG +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGFVVCN*KFWTLE
Trigger: CTCAAGTGTCCAGAATTTCCAATTACAGACGACAAA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGCCTGCGTATGACTTGTaGCTTTGCCCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRPAYDL*LCPVLP
Trigger: TGGCAATACTGGGCAAAGCCACAAGTCATACGCAGG...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCCTGCGTATGACTTGTaGCTTTGCCCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTPAYDL*LCPVLP
Trigger: TGGCAATACTGGGCAAAGCCACAAGTCATACGCAGG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTGAAATTCTGGACACTTaGGGGAATGTATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSEILDT*GNVSCW
Trigger: CCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTC...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGCTTCCTCTTTACCTCTaGGTTGTCTTTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLLPLYL*VVFEMP
Trigger: AGGCATCTCAAAGACAACTCAGAGGTAAAGAGGAAG...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGACTTCCTCTTTACCTCTaGGTTGTCTTTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRLPLYL*VVFEMP
Trigger: AGGCATCTCAAAGACAACTCAGAGGTAAAGAGGAAG...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAAGCCTCCAAATACCGTTaGTTCAAAACTGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQASKYR*FKTALS
Trigger: TGACAATGCAGTTTTGAATCAACGGTATTTGGAGGC...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTCCATCTTCTGCTGTTTaGTATCAAGCATGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFPSSAV*YQAWRG
Trigger: CCCTCGCCATGCTTGATATCAAACAGCAGAAGATGG...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCTTCTTACTCCTTGGTaGTGGAAATCCTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLLTPW*WKSSRP
Trigger: AGGTCTTGAGGATTTCCATCACCAAGGAGTAAGAAG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTATCTTAAGGACCTCTTaGGGACTGTCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFILRTS*GLSWSS
Trigger: GGAAGACCAGGACAGTCCTCAAGAGGTCCTTAAGAT...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAATACGCCAGGGGTTGTTaGAAGGGAAATTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQYARGC*KGNSLL
Trigger: TAAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTA...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCAAAACAGAGAATTCTaGAGTCTTACGCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSQNREF*SLTPGV
Trigger: AACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGAACTCTTGTTTGAGCTaGAGAAGCAGTTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLNSCLS*RSSFRV
Trigger: CACTCGGAAACTGCTTCTTCAGCTCAAACAAGAGTT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAGCTCAAATGCAATTCTaGAAGCATCTGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRAQMQF*KHLPSR
Trigger: ACGTGATGGCAGATGCTTTCAGAATTGCATTTGAGC...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGACTGGTCTGGACTTaGGATTCAGACCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFGLVWT*DSDQIC
Trigger: ACAGATCTGGTCTGAATCTCAAGTCCAGACCAGTCC...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTTGAAGAATTTTCAATaGTTCCTCTTTACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGLKNFQ*FLFTSE
Trigger: CTCAGAGGTAAAGAGGAAGCATTGAAAATTCTTCAA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCCCGTTGATTCAAAACTaGATTGTCAGACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFPLIQN*IVRLQH
Trigger: ATGCTGAAGTCTGACAATGCAGTTTTGAATCAACGG...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGGTCTTTGTCTTCCAATaGCCGAGCAAGCATGTAGCT +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRVFVFQ*PSKHVA
Trigger: AGCTACATGCTTGCTCGGGCATTGGAAGACAAAGAC...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTCCCTTTCTCGGAAATaGAGGAGGGCTAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLSLSRK*RRAKVL
Trigger: AAGAACTTTAGCCCTCCTCCATTTCCGAGAAAGGGA...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCTCCCTTTCTCGGAAATaGAGGAGGGCTAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASSLSRK*RRAKVL
Trigger: AAGAACTTTAGCCCTCCTCCATTTCCGAGAAAGGGA...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTCCCTTTCTCGGAAATaGAGGAGGGCTAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSSLSRK*RRAKVL
Trigger: AAGAACTTTAGCCCTCCTCCATTTCCGAGAAAGGGA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAGCCTGTCATATTTTTaGATCCAAGATTCCTCTATA +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGSLSYF*IQDSSI
Trigger: TATAGAGGAATCTTGGATCCAAAAATATGACAGGCT...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CCA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAGAGTTCTATAGTTTaGATCTATTTGAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGKSSIV*IYLRVL
Trigger: CAGCACTCTCAAATAGATCCAAACTATAGAACTCTT...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCCTCTGAGTTGTCTTTaGGATGCCTCAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTPLSCL*DASSSV
Trigger: AACTGAACTTGAGGCATCTCAAAGACAACTCAGAGG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCCTTTCAAATTCTCTTTaGGGACTGCATTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLSNSL*GLHFHS
Trigger: ACTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAG...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGGCCTCCAAATACCGTTaGTTCAAAACTGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKASKYR*FKTALS
Trigger: TGACAATGCAGTTTTGAATCAACGGTATTTGGAGGC...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTTAGAACTGTTTTCTaGAGGGAGCATACCCAACAG +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTLRTVF*REHTQQ
Trigger: CTGTTGGGTATGCTCCCTTCAGAAAACAGTTCTAAG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTTCTTTATTCTCGTTTaGAGCAGTGTCTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFFFILV*SSVFVF
Trigger: GAAGACAAAGACACTGCTTCAAACGAGAATAAAGAA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTACGCCAGGGGTTGTTaGAAGGGAAATTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSYARGC*KGNSLL
Trigger: TAAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR TCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCAAAACAGAGAATTCTaGAGTCTTACGCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTQNREF*SLTPGV
Trigger: AACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGCAAAACAGAGAATTCTaGAGTCTTACGCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRQNREF*SLTPGV
Trigger: AACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTG...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCAACTCTTGTTTGAGCTaGAGAAGCAGTTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTNSCLS*RSSFRV
Trigger: CACTCGGAAACTGCTTCTTCAGCTCAAACAAGAGTT...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACATTTCCAACTCTTGTTTaGGCTGAAGAAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTFPTLV*AEEAVS
Trigger: GGAAACTGCTTCTTCAGCTCAAACAAGAGTTGGAAA...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTTCTTACTCCTTGGTaGTGGAAATCCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASLLTPW*WKSILF
Trigger: AAAGAGGATGGATTTCCATCACCAAGGAGTAAGAAG...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGAAAATGTTACTACCCTaGCAAGAAGCCATGAACGCA +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKKMLLP*QEAMNA
Trigger: TGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTT...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCGAGACATGTGGTGTATaGACAAGCATTAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASETCGV*TSINSY
Trigger: GTAGCTGTTAATGCTTGTTCATACACCACATGTCTC...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAAGGCTTTGCCCAGTATTaGCATGCTTTGAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: SYTAAISSHLRYLCASLQGFAQY*HALKNF
Trigger: AAAATTCTTCAAAGCATGGCAATACTGGGCAAAGCC...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTATGACTTGTGGCTTTaGCCAGTATTGCCATGCTTT +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSYDLWL*PVLPCF
Trigger: AAAGCATGGCAATACTGGGCAAAGCCACAAGTCATA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCTATGACTTGTGGCTTTaGCCAGTATTGCCATGCTTT +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASYDLWL*PVLPCF
Trigger: AAAGCATGGCAATACTGGGCAAAGCCACAAGTCATA...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTATGACTTGTGGCTTTaGCCAGTATTGCCATGCTTT +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKYDLWL*PVLPCF
Trigger: AAAGCATGGCAATACTGGGCAAAGCCACAAGTCATA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTATACCCAACAGTCTCTaGCCGAAGGTCTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFIPNSL*PKVFLL
Trigger: GAGTAAGAAGACCTTCGGGCAGAGACTGTTGGGTAT...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTCTTAGAACTGTTTTCTaGAGGGAGCATACCCAACAG +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFLRTVF*REHTQQ
Trigger: CTGTTGGGTATGCTCCCTTCAGAAAACAGTTCTAAG...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTCAAAACAGAGAATTCTaGAGTCTTACGCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFQNREF*SLTPGV
Trigger: AACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTG...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCAAAATGTTACTACCCTaGCAAGAAGCCATGAACGCA +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTKMLLP*QEAMNA
Trigger: TGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTT...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTTGAAGAATTTTCAATaGTTCCTCTTTACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLKNFQ*FLFTSE
Trigger: CTCAGAGGTAAAGAGGAAGCATTGAAAATTCTTCAA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCGGCTTTGCCCAGTATTaGCATGCTTTGAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASGFAQY*HALKNF
Trigger: AAAATTCTTCAAAGCATGGCAATACTGGGCAAAGCC...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTGGCTTTGCCCAGTATTaGCATGCTTTGAAGAATTTT +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSGFAQY*HALKNF
Trigger: AAAATTCTTCAAAGCATGGCAATACTGGGCAAAGCC...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACACCGTTGATTCAAAACTaGATTGTCAGACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTPLIQN*IVRLQH
Trigger: ATGCTGAAGTCTGACAATGCAGTTTTGAATCAACGG...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGAATTCTGAAAGCATCTaGCATCACGTAAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKNSESI*HHVSFF
Trigger: GAAGAAGCTTACGTGATGGCAGATGCTTTCAGAATT...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGAGTATTGCCATGCTTTaGAGAATTTTCAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLSIAML*RIFNAS
Trigger: GGAAGCATTGAAAATTCTTCAAAGCATGGCAATACT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTTTCAAATTCTCTTTaGGGACTGCATTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASLSNSL*GLHFHS
Trigger: ACTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAG...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR TCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGCTTTCAAATTCTCTTTaGGGACTGCATTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLLSNSL*GLHFHS
Trigger: ACTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAG...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTTTTCCAACTCTTGTTTaGGCTGAAGAAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFFPTLV*AEEAVS
Trigger: GGAAACTGCTTCTTCAGCTCAAACAAGAGTTGGAAA...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCAATTTAAGATGCTACTaGGACATGTGGTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASNLRCY*DMWCMN
Trigger: GTTCATACACCACATGTCTCAGTAGCATCTTAAATT...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR GCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTGCCCAGTATTGCCATaGTTTGAAGAATTTTCAATG +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSCPVLP*FEEFSM
Trigger: CATTGAAAATTCTTCAAAGCATGGCAATACTGGGCA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTGCCCAGTATTGCCATaGTTTGAAGAATTTTCAATG +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKCPVLP*FEEFSM
Trigger: CATTGAAAATTCTTCAAAGCATGGCAATACTGGGCA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCCGTTGATTCAAAACTaGATTGTCAGACTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTPLIQN*IVRLQH
Trigger: ATGCTGAAGTCTGACAATGCAGTTTTGAATCAACGG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGAATTCTGAAAGCATCTaGCATCACGTAAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRNSESI*HHVSFF
Trigger: GAAGAAGCTTACGTGATGGCAGATGCTTTCAGAATT...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACATTGGCTACAAATCTGTaGAGATTTGGTTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTLATNL*RFGCKM
Trigger: CATTTTGCAACCAAATCTGCACAGATTTGTAGCCAA...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTGGCTACAAATCTGTaGAGATTTGGTTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKLATNL*RFGCKM
Trigger: CATTTTGCAACCAAATCTGCACAGATTTGTAGCCAA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCATTTAAGATATCTGTaGGCCAGCCTACAAGAAATA +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASHLRYL*ASLQEI
Trigger: TATTTCTTGTAGGCTGGCGCACAGATATCTTAAATG...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGAAACACACCTCTAGGTaGAAATTTAAGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLKHTSR*KFKMLL
Trigger: CAGTAGCATCTTAAATTTCCACCTAGAGGTGTGTTT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
3UTR CAA 72 bp GATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTaGGCTACAAATCTGTGCAGATTTGGTTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: DAMKRAVKHFVD*ATNLCRFGCKM
Trigger: CATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR TCA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGTTCTTTATTCTCGTTTaGAGCAGTGTCTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRFFILV*SSVFVF
Trigger: GAAGACAAAGACACTGCTTCAAACGAGAATAAAGAA...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTTGAAGAATTTTCAATaGTTCCTCTTTACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLLKNFQ*FLFTSE
Trigger: CTCAGAGGTAAAGAGGAAGCATTGAAAATTCTTCAA...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGATTGAAGAATTTTCAATaGTTCCTCTTTACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRLKNFQ*FLFTSE
Trigger: CTCAGAGGTAAAGAGGAAGCATTGAAAATTCTTCAA...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCAATTCGAATCTACAGTaGTACTTTGTCGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LFSYTAAISSHLRYLCASNSNLQ*YFVVCN
Trigger: ATTACAGACGACAAAGTAGCACTGTAGATTCGAATT...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR GCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGAATTCGAATCTACAGTaGTACTTTGTCGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLNSNLQ*YFVVCN
Trigger: ATTACAGACGACAAAGTAGCACTGTAGATTCGAATT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCCATCCTCTTTAAGGTaGTTCCAATTCATCCATTTT +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTPSSLR*FQFIHF
Trigger: AAAATGGATGAATTGGAAGCACCTTAAAGAGGATGG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGAGCCTGTCATATTTTTaGATCCAAGATTCCTCTATA +
Preference number: 4 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLSLSYF*IQDSSI
Trigger: TATAGAGGAATCTTGGATCCAAAAATATGACAGGCT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTAAGAGTTCTATAGTTTaGATCTATTTGAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSKSSIV*IYLRVL
Trigger: CAGCACTCTCAAATAGATCCAAACTATAGAACTCTT...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CCA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGAAGAGTTCTATAGTTTaGATCTATTTGAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKKSSIV*IYLRVL
Trigger: CAGCACTCTCAAATAGATCCAAACTATAGAACTCTT...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
3UTR CAA 72 bp GAGTTCTATAGTTTGGATCTATTTGAGAGTGCTGGATaGAACAAATGCAGCCCACAGAATTTAAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: EFYSLDLFESAG*NKCSPQNLKCR
Trigger: TCTGCATTTTAAATTCTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAAATAGATCCAAACTATAGAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR GCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCTTGAAGAATTTTCAATaGTTCCTCTTTACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTLKNFQ*FLFTSE
Trigger: CTCAGAGGTAAAGAGGAAGCATTGAAAATTCTTCAA...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTTGCCCAGTATTGCCATaGTTTGAAGAATTTTCAATG +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFCPVLP*FEEFSM
Trigger: CATTGAAAATTCTTCAAAGCATGGCAATACTGGGCA...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCAATTCGAATCTACAGTaGTACTTTGTCGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTNSNLQ*YFVVCN
Trigger: ATTACAGACGACAAAGTAGCACTGTAGATTCGAATT...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCAGCCTGTCATATTTTTaGATCCAAGATTCCTCTATA +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTSLSYF*IQDSSI
Trigger: TATAGAGGAATCTTGGATCCAAAAATATGACAGGCT...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CCA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCAAGAGTTCTATAGTTTaGATCTATTTGAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTKSSIV*IYLRVL
Trigger: CAGCACTCTCAAATAGATCCAAACTATAGAACTCTT...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR GCA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTTTTTGCAATAAATTATaGTGCATCTCCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFFCNKL*CISFAV
Trigger: GACAGCAAAGGAGATGCAGCATAATTTATTGCAAAA...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS GCA 90 bp ACTCAATGCCAGCCTGTGAAAGCAGCCAGGAGGGAGGCTGTACTCTaGAAAGCCACAGGGGCGGAGCTGCCCAAGGCCATGGGAACCCAC +
Preference number: 5 (lower is better)
Translates to: TQCQPVKAARREAVL*KATGAELPKAMGTH
Trigger: GTGGGTTCCCATGGCCTTGGGCAGCTCCGCCCCTGTGGCTTTGCAGAGTACAGCCTCCCTCCTGGCTGCTTTCACAGGCTGGCATTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CCA 90 bp GGCTCTCATGGAGAACCGGGGCTAGGGCACTACAGAAGGGAAATGTaGGGTTGGAGCCCCCACACAGAGTCCCTACTACAGCACTGCCTA +
Preference number: 5 (lower is better)
Translates to: GSHGEPGLGHYRREM*GWSPHTESLLQHCL
Trigger: TAGGCAGTGCTGTAGTAGGGACTCTGTGTGGGGGCTCCAACCCCACATTTCCCTTCTGTAGTGCCCTAGCCCCGGTTCTCCATGAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS TCA 90 bp AGCCCCCACACAGAGTCCCTACTACAGCACTGCCTAGTGGAGCTATaGGAAGAGGGCCACCATCCTCCAGACCCCAGAATGGTAGATCCA +
Preference number: 5 (lower is better)
Translates to: SPHTESLLQHCLVEL*EEGHHPPDPRMVDP
Trigger: TGGATCTACCATTCTGGGGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCACTAGGCAGTGCTGTAGTAGGGACTCTGTGTGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS GCA 90 bp ACCCATGGCTTACACTGTGCACCTGGGAAAGCCGCAGACACTCAATaGCAGCCTGTGAAAGCAGCCAGGAGGGAGGCTGTACTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: THGLHCAPGKAADTQ*QPVKAARREAVLCK
Trigger: TTTGCAGAGTACAGCCTCCCTCCTGGCTGCTTTCACAGGCTGGCATTGAGTGTCTGCGGCTTTCCCAGGTGCACAGTGTAAGCCATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS-3UTR CAA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAGGCAGGAGAATTGCTaGAACCGGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTIRQENC*NREAEV
Trigger: AACCTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCT...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCCTGCCTGCGTATGACTaGTGGCTTTGCCCAGTATTG +
Preference number: 5 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTILPAYD*WLCPVL
Trigger: CAATACTGGGCAAAGCCACAAGTCATACGCAGGCAG...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTTGCCCAGGCTGGTCTaGAACTCTGGACTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLLPRLV*NSGLVW
Trigger: CCAGACCAGTCCAGAGTTCAAGACCAGCCTGGGCAA...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS GCA 90 bp ATGGAAATCCTCTTGTTTGAGCTGAAGAAGCAGTTTCCGAGTGGATaGTGCCATTCTGGCACAAGAACAGGGGTTCCCTCCGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: MEILLFELKKQFPSG*CHSGTRTGVPSGPM
Trigger: CATGGGCCCGGAGGGAACCCCTGTTCTTGTGCCAGAATGGCAGCATCCACTCGGAAACTGCTTCTTCAGCTCAAACAAGAGGATTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460090.5
ENST00000615018.4
CDS GCA 90 bp AATTTCCAACTCTTGTTTGAGCTGAAGAAGCAGTTTCCGAGTGGATaGTGCCATTCTGGCACAAGAACAGGGGTTCCCTCCGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: NFQLLFELKKQFPSG*CHSGTRTGVPSGPM
Trigger: CATGGGCCCGGAGGGAACCCCTGTTCTTGTGCCAGAATGGCAGCATCCACTCGGAAACTGCTTCTTCAGCTCAAACAAGAGTTGGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000511257.1
ENST00000612469.4
ENST00000619386.1
ENST00000620431.4
CDS-3UTR CAA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCGTCTTACGCCAGGGGTaGTTGAAAGGGAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTVLRQG*LKGKFS
Trigger: AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGAC...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS GCA 90 bp CCCAAGATAATGGGGAAAATGTCTCCAGGGCATGTCAGAGACCTTTaGAGCAGCCTCTCTCATCACAGAGCCAGAAGTCTCGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PKIMGKMSPGHVRDL*SSLSHHRARSLGGK
Trigger: TTTTCCTCCGAGACTTCTGGCTCTGTGATGAGAGAGGCTGCTGCAAAGGTCTCTGACATGCCCTGGAGACATTTTCCCCATTATCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS-3UTR CAA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCACCTCTGAGTTGTCTTaGAGATGCCTCAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTTSELS*RCLKFS
Trigger: ACTGAACTTGAGGCATCTCAAAGACAACTCAGAGGT...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCACCTCTGAGTTGTCTTaGAGATGCCTCAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: AMNAAGTDSIYFCQGPTITSELS*RCLKFS
Trigger: ACTGAACTTGAGGCATCTCAAAGACAACTCAGAGGT...GATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCAGGTCTTCTTACTCCTaGGTGATGGAAATCCATCCT +
Preference number: 5 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTRSSYS*VMEIHP
Trigger: AGGATGGATTTCCATCACCAAGGAGTAAGAAGACCT...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS TCA 90 bp CCTGAAGCCTCTGCAAAGCCACTTTTATCACAGCACATGTTTTCCTaGGCCATCTTCTGCTGTTTGATATCAAGCATGGCGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PEASAKPLLSQHMFS*AIFCCLISSMARAS
Trigger: GGAGGCCCTCGCCATGCTTGATATCAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTGTGATAAAAGTGGCTTTGCAGAGGCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGATGATCTTGCCACCTaGCTCATGAGCCAAATGCCG +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGDDLAT*LMSQMP
Trigger: CGGCATTTGGCTCATGAGCAAGGTGGCAAGATCATC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGCACGTCTGACTCACTaGATGATCTTGCCACCTTGC +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGARLTH*MILPPC
Trigger: GCAAGGTGGCAAGATCATCAAGTGAGTCAGACGTGC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCTGCCTGCGTATGACTaGTGGCTTTGCCCAGTATTG +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGLPAYD*WLCPVL
Trigger: CAATACTGGGCAAAGCCACAAGTCATACGCAGGCAG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGGTCTTACGCCAGGGGTaGTTGAAAGGGAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLVLRQG*LKGKFS
Trigger: AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGAC...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GTTTCTCCAGCAATAATCAATGCTGTCTCACCCTTACGAGCAGCCGGCCCTGAATTTGAGAGTGCTGGATaGAACAAATGCAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: VSPAIINAVSPLRAAGPEFESAG*NKCSPQ
Trigger: CTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAAA...TTCAGGGCCGGCTGCTCGTAAGGGTGAGACAGCATTGATTATTGCTGGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS GCA 90 bp CCTAAATCACCTTCTGTCATGTCATCCTCTTCTGTTTCCCAGAGCTaGACGTCTGACTCACTTGATGATCTTGCCACCTTGCTCATGAGC +
Preference number: 5 (lower is better)
Translates to: PKSPSVMSSSSVSQS*TSDSLDDLATLLMS
Trigger: GCTCATGAGCAAGGTGGCAAGATCATCAAGTGAGTCAGACGTGCAGCTCTGGGAAACAGAAGAGGATGACATGACAGAAGGTGATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000512045.5
ENST00000513172.1
ENST00000610685.4
ENST00000611691.4
ENST00000621007.1
CDS-3UTR CAA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGGGCCTCCAAATACCGTaGATTCAAAACTGCATTGTC +
Preference number: 5 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLGLQIP*IQNCIV
Trigger: GACAATGCAGTTTTGAATCAACGGTATTTGGAGGCC...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GAAGCCATGAACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCGTAGCTAACTTTTCTTaGATGAGCCAAAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: EAMNAAGTDSIYFCQGPTVANFS*MSQSFF
Trigger: GAAGAAGCTTTGGCTCATCAAAGAAAAGTTAGCTAC...GGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGTTCATGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCGATGATCTTGCCACCTaGCTCATGAGCCAAATGCCG +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFDDLAT*LMSQMP
Trigger: CGGCATTTGGCTCATGAGCAAGGTGGCAAGATCATC...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp ACGCAGCCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTGGCTTTGCCCAGTATaGCCATGCTTTGAAGAATTT +
Preference number: 5 (lower is better)
Translates to: TQPALTQYTSAKVPPSKLWLCPV*PCFEEF
Trigger: AAATTCTTCAAAGCATGGCAATACTGGGCAAAGCCA...CAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGGCTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCCTGCCTGCGTATGACTaGTGGCTTTGCCCAGTATTG +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLPAYD*WLCPVL
Trigger: CAATACTGGGCAAAGCCACAAGTCATACGCAGGCAG...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTTTGAAGCAGTGTCTTaGTCTTCCAATGCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGFEAVS*SSNARA
Trigger: TGCTCGGGCATTGGAAGACAAAGACACTGCTTCAAA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTTTGAGAGTGCTGGATaGAACAAATGCAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGFESAG*NKCSPQ
Trigger: CTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAAA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTAGGCAGGAGAATTGCTaGAACCGGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSRQENC*NREAEV
Trigger: AACCTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCT...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGAGGCAGGAGAATTGCTaGAACCGGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLRQENC*NREAEV
Trigger: AACCTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGGCAGGAGAATTGCTaGAACCGGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRRQENC*NREAEV
Trigger: AACCTCCGCCTCCCGGTTCAAGCAATTCTCCTGCCT...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTTGAGGGAATGTATCTaGCTGGCTCTTATGCTTGGA +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGLRECI*LALMLG
Trigger: TCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGACCTCTGAGTTGTCTTaGAGATGCCTCAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGTSELS*RCLKFS
Trigger: ACTGAACTTGAGGCATCTCAAAGACAACTCAGAGGT...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGGCCTCCAAATACCGTaGATTCAAAACTGCATTGTC +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGGLQIP*IQNCIV
Trigger: GACAATGCAGTTTTGAATCAACGGTATTTGGAGGCC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCTTTGAAGCAGTGTCTTaGTCTTCCAATGCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSFEAVS*SSNARA
Trigger: TGCTCGGGCATTGGAAGACAAAGACACTGCTTCAAA...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTTTGAAGCAGTGTCTTaGTCTTCCAATGCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYFEAVS*SSNARA
Trigger: TGCTCGGGCATTGGAAGACAAAGACACTGCTTCAAA...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATGTCTTACGCCAGGGGTaGTTGAAAGGGAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYVLRQG*LKGKFS
Trigger: AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGAC...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCGCATGCCACCATGCCTaGCCGAGTTTTTGTATAGAT +
Preference number: 5 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSACHHA*PSFCID
Trigger: ATCTATACAAAAACTCGGCAAGGCATGGTGGCATGC...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATGCATGCCACCATGCCTaGCCGAGTTTTTGTATAGAT +
Preference number: 5 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYACHHA*PSFCID
Trigger: ATCTATACAAAAACTCGGCAAGGCATGGTGGCATGC...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAGATGATCTTGCCACCTaGCTCATGAGCCAAATGCCG +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTDDLAT*LMSQMP
Trigger: CGGCATTTGGCTCATGAGCAAGGTGGCAAGATCATC...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAGATGATCTTGCCACCTaGCTCATGAGCCAAATGCCG +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRDDLAT*LMSQMP
Trigger: CGGCATTTGGCTCATGAGCAAGGTGGCAAGATCATC...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATCTCTTTACCTCTGAGTaGTCTTTGAGATGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYLFTSE*SLRCLK
Trigger: CTTGAGGCATCTCAAAGACAACTCAGAGGTAAAGAG...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGTGGCTTTGCCCAGTATaGCCATGCTTTGAAGAATTT +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGWLCPV*PCFEEF
Trigger: AAATTCTTCAAAGCATGGCAATACTGGGCAAAGCCA...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGACTGCCTGCGTATGACTaGTGGCTTTGCCCAGTATTG +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRLPAYD*WLCPVL
Trigger: CAATACTGGGCAAAGCCACAAGTCATACGCAGGCAG...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCGTCTTACGCCAGGGGTaGTTGAAAGGGAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFVLRQG*LKGKFS
Trigger: AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGAC...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTTTGAGAGTGCTGGATaGAACAAATGCAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFFESAG*NKCSPQ
Trigger: CTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAAA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS CCA 90 bp AAGGGACTTGCCTTGTCTCAGATGAGACTTTGGACTGTGGATTTTTaGGTTAATGCTGAAATGATTTCAGACTTTGGGGGACTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: KGLALSQMRLWTVDF*VNAEMISDFGGLLG
Trigger: TCCCAACAGTCCCCCAAAGTCTGAAATCATTTCAGCATTAACCCAAAAATCCACAGTCCAAAGTCTCATCTGAGACAAGGCAAGTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCCTCTTTACCTCTGAGTaGTCTTTGAGATGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLFTSE*SLRCLK
Trigger: CTTGAGGCATCTCAAAGACAACTCAGAGGTAAAGAG...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGCTGCCTGCGTATGACTaGTGGCTTTGCCCAGTATTG +
Preference number: 5 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRLPAYD*WLCPVL
Trigger: CAATACTGGGCAAAGCCACAAGTCATACGCAGGCAG...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCAGGTCTTCTTACTCCTaGGTGATGGAAATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFRSSYS*VMEILK
Trigger: CTTGAGGATTTCCATCACCAAGGAGTAAGAAGACCT...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGGTAGCTAACTTTTCTTaGATGAGCCAAAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGVANFS*MSQSFF
Trigger: GAAGAAGCTTTGGCTCATCAAAGAAAAGTTAGCTAC...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCTGGACTGGTCTGGACTaGAGATTCAGACCAGATCTG +
Preference number: 5 (lower is better)
Translates to: LFSYTAAISSHLRYLCASWTGLD*RFRPDL
Trigger: CAGATCTGGTCTGAATCTCAAGTCCAGACCAGTCCA...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS TCA 90 bp CACTTTTATCACAGCACATGTTTTCCTGAGCCATCTTCTGCTGTTTaGTATCAAGCATGGCGAGGGCCTCCAAATACCGTTGATTCAAAA +
Preference number: 5 (lower is better)
Translates to: HFYHSTCFPEPSSAV*YQAWRGPPNTVDSK
Trigger: TTTTGAATCAACGGTATTTGGAGGCCCTCGCCATGCTTGATATCAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTGTGATAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS CCA 90 bp CCAGCTCATAGGCAGAAGGGACTTGCCTTGTCTCAGATGAGACTTTaGACTGTGGATTTTTGGGTTAATGCTGAAATGATTTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: PAHRQKGLALSQMRL*TVDFWVNAEMISDF
Trigger: AAAGTCTGAAATCATTTCAGCATTAACCCAAAAATCCACAGTCCAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCTGCCTATGAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGCAGTATTGCCATGCTTaGAAGAATTTTCAATGCTTC +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGQYCHA*KNFQCF
Trigger: GAAGCATTGAAAATTCTTCAAAGCATGGCAATACTG...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTTGTTCCATAGTTTTTaGAAGCACTGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLFHSF*KHCLRM
Trigger: CATACGCAGGCAGTGCTTCAAAAAACTATGGAACAA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp GGATCACCCAAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGACTTTCAAATTCTCTTaGAGGACTGCATTTTCACAG +
Preference number: 5 (lower is better)
Translates to: GSPKTENSEVLRQGLLKGTFKFS*RTAFSQ
Trigger: CTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAGT...CCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTTGGGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCTTACGCCAGGGGTTGTaGAAAGGGAAATTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFLRQGL*KGKFSF
Trigger: AAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTAA...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTGTCTTACGCCAGGGGTaGTTGAAAGGGAAATTCTCT +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSVLRQG*LKGKFS
Trigger: AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGAC...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTTTGAGAGTGCTGGATaGAACAAATGCAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLFESAG*NKCSPQ
Trigger: CTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAAA...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp GTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAGCCATGAACGCAGCCAAAATTTCCAACTCTaGTTTGAGCTGAAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VQIWLQNVTTLTRSHERSQNFQL*FELKKQ
Trigger: CTGCTTCTTCAGCTCAAACAAGAGTTGGAAATTTTG...GCTGCGTTCATGGCTTCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCTGGACTGGTCTGGACTaGAGATTCAGACCAGATCTG +
Preference number: 5 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTWTGLD*RFRPDL
Trigger: CAGATCTGGTCTGAATCTCAAGTCCAGACCAGTCCA...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACATGCCTTGCCGAGTTTTaGTATAGATGGGGTTTCACC +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTCLAEF*YRWGFT
Trigger: GGTGAAACCCCATCTATACAAAAACTCGGCAAGGCA...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGATGCCTTGCCGAGTTTTaGTATAGATGGGGTTTCACC +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRCLAEF*YRWGFT
Trigger: GGTGAAACCCCATCTATACAAAAACTCGGCAAGGCA...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS TCA 90 bp CCCAAATCTCATTTTGAATTGTACTCTCATAATTACCACATGTTGTaGGAGGACCCGGTGGGAGATAATCTGAATCATGGGGGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: PKSHFELYSHNYHML*EDPVGDNLNHGGGF
Trigger: AAAACCACCCCCATGATTCAGATTATCTCCCACCGGGTCCTCTCACAACATGTGGTAATTATGAGAGTACAATTCAAAATGAGATTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CCA 90 bp CATTTCTACCTCCAGTGCTACTTTGTCGTCTGTAATTGGAAATTCTaGACACTTGAGGGAATGTATCTTGCTGGCTCTTATGCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: HFYLQCYFVVCNWKF*TLEGMYLAGSYAWN
Trigger: ATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGGAGGTAGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTTGAGGGAATGTATCTaGCTGGCTCTTATGCTTGGA +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLRECI*LALMLG
Trigger: TCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACATTGAGGGAATGTATCTaGCTGGCTCTTATGCTTGGA +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTLRECI*LALMLG
Trigger: TCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAA...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTTGAGGGAATGTATCTaGCTGGCTCTTATGCTTGGA +
Preference number: 5 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLLRECI*LALMLG
Trigger: TCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAA...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGATTGAGGGAATGTATCTaGCTGGCTCTTATGCTTGGA +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRLRECI*LALMLG
Trigger: TCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAA...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGACCTCTGAGTTGTCTTaGAGATGCCTCAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKTSELS*RCLKFS
Trigger: ACTGAACTTGAGGCATCTCAAAGACAACTCAGAGGT...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACACTCTTTACCTCTGAGTaGTCTTTGAGATGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTLFTSE*SLRCLK
Trigger: CTTGAGGCATCTCAAAGACAACTCAGAGGTAAAGAG...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGCTCTTTACCTCTGAGTaGTCTTTGAGATGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKLFTSE*SLRCLK
Trigger: CTTGAGGCATCTCAAAGACAACTCAGAGGTAAAGAG...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCTCTTTACCTCTGAGTaGTCTTTGAGATGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLFTSE*SLRCLK
Trigger: CTTGAGGCATCTCAAAGACAACTCAGAGGTAAAGAG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATACTTTCAAATTCTCTTaGAGGACTGCATTTTCACAG +
Preference number: 5 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYTFKFS*RTAFSQ
Trigger: CTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAGT...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAGGCCTCCAAATACCGTaGATTCAAAACTGCATTGTC +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTGLQIP*IQNCIV
Trigger: GACAATGCAGTTTTGAATCAACGGTATTTGGAGGCC...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTAGGTCTTCTTACTCCTaGGTGATGGAAATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSRSSYS*VMEILK
Trigger: CTTGAGGATTTCCATCACCAAGGAGTAAGAAGACCT...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCGTAGCTAACTTTTCTTaGATGAGCCAAAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFVANFS*MSQSFF
Trigger: GAAGAAGCTTTGGCTCATCAAAGAAAAGTTAGCTAC...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp CCGGCACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATATCTACAGTGCTACTTaGTCGTCTGTAATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: PALTQYTSAKVPPSKLSYIYSAT*SSVIGN
Trigger: ATTTCCAATTACAGACGACAAAGTAGCACTGTAGAT...ATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGTGCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGAGGTCTTCTTACTCCTaGGTGATGGAAATCCATCCT +
Preference number: 5 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLRSSYS*VMEIHP
Trigger: AGGATGGATTTCCATCACCAAGGAGTAAGAAGACCT...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCTACAATCTGTGCAGATTTGGTaGCAAAATGTTACTACCCTG +
Preference number: 5 (lower is better)
Translates to: SYTAAISSHLRYLCASLQSVQIW*QNVTTL
Trigger: CAGGGTAGTAACATTTTGCAACCAAATCTGCACAGA...TTGTAGGCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCGGCCTTGATAGCCATTaGTTTTCATACACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LFSYTAAISSHLRYLCASGLDSH*FSYTAA
Trigger: TGCTGCTGTGTATGAAAACAAATGGCTATCAAGGCC...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGGGCCTTGATAGCCATTaGTTTTCATACACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKGLDSH*FSYTAA
Trigger: TGCTGCTGTGTATGAAAACAAATGGCTATCAAGGCC...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS CCA 90 bp AAATTCTGGACACTTGAGGGAATGTATCTTGCTGGCTCTTATGCTTaGAATACTGAAAACTCGCTTCATTTCTTTCTTCTCCCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: KFWTLEGMYLAGSYA*NTENSLHFFLLPFS
Trigger: CGAGAAAGGGAGAAGAAAGAAATGAAGCGAGTTTTCAGTATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000512045.5
ENST00000513172.1
ENST00000610685.4
ENST00000611691.4
ENST00000619386.1
ENST00000620431.4
ENST00000621007.1
CDS CCA 90 bp CTGAATTCGAATCAGTGCTACTTTGTCGTCTGTAATTGGAAATTCTaGACACTTGAGGGAATGTATCTTGCTGGCTCTTATGCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: LNSNQCYFVVCNWKF*TLEGMYLAGSYAWN
Trigger: ATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGATTCGAATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383374.6
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
CDS CCA 90 bp CTGGTGGAAGAAATTTCTAAGCAGCAAAGCATTCAAGAGATGGCTTaGGTACTGTTAAAGGCATTCCATTTTAAAAGGGAAGCACAGCAT +
Preference number: 5 (lower is better)
Translates to: LVEEISKQQSIQEMA*VLLKAFHFKREAQH
Trigger: ATGCTGTGCTTCCCTTTTAAAATGGAATGCCTTTAACAGTACCCAAGCCATCTCTTGAATGCTTTGCTGCTTAGAAATTTCTTCCACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS-3UTR CAA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGGCTTTGCCCAGTATaGCCATGCTTTGAAGAATTT +
Preference number: 5 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLWLCPV*PCFEEF
Trigger: AAATTCTTCAAAGCATGGCAATACTGGGCAAAGCCA...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTGGCTTTGCCCAGTATaGCCATGCTTTGAAGAATTT +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSWLCPV*PCFEEF
Trigger: AAATTCTTCAAAGCATGGCAATACTGGGCAAAGCCA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTTGTTCCATAGTTTTTaGAAGCACTGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLFHSF*KHCLRM
Trigger: CATACGCAGGCAGTGCTTCAAAAAACTATGGAACAA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCTTGTTCCATAGTTTTTaGAAGCACTGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: LFSYTAAISSHLRYLCASLFHSF*KHCLRM
Trigger: CATACGCAGGCAGTGCTTCAAAAAACTATGGAACAA...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTGTTCCATAGTTTTTaGAAGCACTGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKLFHSF*KHCLRM
Trigger: CATACGCAGGCAGTGCTTCAAAAAACTATGGAACAA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TTCCAATGCCCGAGCAAGCATGTAGCTAACTTTTCTTTGATGAGCCAAAGCTTCACTTTCAAATTCTCTTaGAGGACTGCATTTTCACAG +
Preference number: 5 (lower is better)
Translates to: FQCPSKHVANFSLMSQSFTFKFS*RTAFSQ
Trigger: CTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAGT...GAAGCTTTGGCTCATCAAAGAAAAGTTAGCTACATGCTTGCTCGGGCATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTTTTGAAGCAGTGTCTTaGTCTTCCAATGCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFFEAVS*SSNARA
Trigger: TGCTCGGGCATTGGAAGACAAAGACACTGCTTCAAA...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTTTACGCCAGGGGTTGTaGAAAGGGAAATTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSLRQGL*KGKFSF
Trigger: AAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTAA...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGATTACGCCAGGGGTTGTaGAAAGGGAAATTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRLRQGL*KGKFSF
Trigger: AAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTAA...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CAGGATGCAATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTTACGCCAGGGGTTGTaGAAAGGGAAATTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: QDAMKRAVKHFVDLATNLLRQGL*KGKFSF
Trigger: AAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTAA...CAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCATTGCATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTACGCCAGGGGTTGTaGAAAGGGAAATTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKLRQGL*KGKFSF
Trigger: AAAAGAGAATTTCCCTTTCAACAACCCCTGGCGTAA...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTTTTGAGAGTGCTGGATaGAACAAATGCAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFFESAG*NKCSPQ
Trigger: CTGTGGGCTGCATTTGTTCAATCCAGCACTCTCAAA...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCAGGTCTTCTTACTCCTaGGTGATGGAAATCCATCCT +
Preference number: 5 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTRSSYS*VMEIHP
Trigger: AGGATGGATTTCCATCACCAAGGAGTAAGAAGACCT...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACATCTGTGCAGATTTGGTaGCAAAATGTTACTACCCTG +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTSVQIW*QNVTTL
Trigger: CAGGGTAGTAACATTTTGCAACCAAATCTGCACAGA...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAAGCACTTTGTAGACTaGGCTACAAATCTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTKHFVD*ATNLCR
Trigger: TCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTT...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGAAGCACTTTGTAGACTaGGCTACAAATCTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKKHFVD*ATNLCR
Trigger: TCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTT...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAAAGCACTTTGTAGACTaGGCTACAAATCTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRKHFVD*ATNLCR
Trigger: TCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTT...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS CCA 90 bp AATTCGAATCTACAGTGCTACTTTGTCGTCTGTAATTGGAAATTCTaGACACTTGAGGGAATGTATCTTGCTGGCTCTTATGCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: NSNLQCYFVVCNWKF*TLEGMYLAGSYAWN
Trigger: ATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGTAGATTCGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000513172.1
ENST00000619386.1
ENST00000620431.4
ENST00000621007.1
CDS CCA 90 bp CCAAATACCGTTGATTCAAAACAGTGCTACTTTGTCGTCTGTAATTaGAAATTCTGGACACTTGAGGGAATGTATCTTGCTGGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: PNTVDSKQCYFVVCN*KFWTLEGMYLAGSY
Trigger: ATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGTTTTGAATCAACGGTATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460090.5
ENST00000615018.4
CDS CCA 90 bp ACACCACCCAAATGTCCATCAACTGGTGAATGCATAAGCAAAACATaGTGCATCTACACAATGGAGTATTACTTGGCAATAAAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: TPPKCPSTGECISKT*CIYTMEYYLAIKRK
Trigger: CTTCCTTTTTATTGCCAAGTAATACTCCATTGTGTAGATGCACCATGTTTTGCTTATGCATTCACCAGTTGATGGACATTTGGGTGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCGAATCAGTGCTACTTaGTCGTCTGTAATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSRISAT*SSVIGN
Trigger: ATTTCCAATTACAGACGACAAAGTAGCACTGATTCG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGCCTCCAAATACCGTaGATTCAAAACTGCATTGTC +
Preference number: 5 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFGLQIP*IQNCIV
Trigger: GACAATGCAGTTTTGAATCAACGGTATTTGGAGGCC...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGAGTAGCTAACTTTTCTTaGATGAGCCAAAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRVANFS*MSQSFF
Trigger: GAAGAAGCTTTGGCTCATCAAAGAAAAGTTAGCTAC...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGACAAAATTTCCAACTCTaGTTTGAGCTGAAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRQNFQL*FELKKQ
Trigger: CTGCTTCTTCAGCTCAAACAAGAGTTGGAAATTTTG...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCTCTGTGCAGATTTGGTaGCAAAATGTTACTACCCTG +
Preference number: 5 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTSVQIW*QNVTTL
Trigger: CAGGGTAGTAACATTTTGCAACCAAATCTGCACAGA...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS TCA 90 bp TCTTCTTTATCATTAAGCAAATCTATGAGCATCTTAAGGACCTCTTaGGGACTGTCCTGGTCTTCCATCCTCTTAGAACTGTTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SSLSLSKSMSILRTS*GLSWSSILLELFSE
Trigger: TTCAGAAAACAGTTCTAAGAGGATGGAAGACCAGGACAGTCCTCAAGAGGTCCTTAAGATGCTCATAGATTTGCTTAATGATAAAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS CCA 90 bp TTGACAATTCTGAATTCGAATCAGTGCTACTTTGTCGTCTGTAATTaGAAATTCTGGACACTTGAGGGAATGTATCTTGCTGGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: LTILNSNQCYFVVCN*KFWTLEGMYLAGSY
Trigger: ATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGATTCGAATTCAGAATTGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383374.6
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
CDS CCA 90 bp ACAATTCTGAATTCGAATCTACAGTGCTACTTTGTCGTCTGTAATTaGAAATTCTGGACACTTGAGGGAATGTATCTTGCTGGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: TILNSNLQCYFVVCN*KFWTLEGMYLAGSY
Trigger: ATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGTAGATTCGAATTCAGAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000513172.1
ENST00000619386.1
ENST00000620431.4
ENST00000621007.1
CDS-3UTR CAA 90 bp CTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACAAGACAGTATTGCCATGCTTaGAAGAATTTTCAATGCTTC +
Preference number: 5 (lower is better)
Translates to: LGYKSVQIWLQNVTTLTRQYCHA*KNFQCF
Trigger: GAAGCATTGAAAATTCTTCAAAGCATGGCAATACTG...TCTTGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCCAGTATTGCCATGCTTaGAAGAATTTTCAATGCTTC +
Preference number: 5 (lower is better)
Translates to: LFSYTAAISSHLRYLCASQYCHA*KNFQCF
Trigger: GAAGCATTGAAAATTCTTCAAAGCATGGCAATACTG...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp AAAACAGAGAATTCTGAAGTCTTACGCCAGGGGTTGTTGAAAGGGAAATTCTCTCAGTATTGCCATGCTTaGAAGAATTTTCAATGCTTC +
Preference number: 5 (lower is better)
Translates to: KTENSEVLRQGLLKGKFSQYCHA*KNFQCF
Trigger: GAAGCATTGAAAATTCTTCAAAGCATGGCAATACTG...AGAGAATTTCCCTTTCAACAACCCCTGGCGTAAGACTTCAGAATTCTCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383374.6
ENST00000610685.4
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACACAGTATTGCCATGCTTaGAAGAATTTTCAATGCTTC +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTQYCHA*KNFQCF
Trigger: GAAGCATTGAAAATTCTTCAAAGCATGGCAATACTG...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTTTGTTCCATAGTTTTTaGAAGCACTGCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFLFHSF*KHCLRM
Trigger: CATACGCAGGCAGTGCTTCAAAAAACTATGGAACAA...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp TTGTTTTCATACACAGCAGCAATTAGTAGCCATTTAAGATATCTGTGCGCCAGCACTTTCAAATTCTCTTaGAGGACTGCATTTTCACAG +
Preference number: 5 (lower is better)
Translates to: LFSYTAAISSHLRYLCASTFKFS*RTAFSQ
Trigger: CTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAGT...GCTGGCGCACAGATATCTTAAATGGCTACTAATTGCTGCTGTGTATGAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396496.7
ENST00000396499.5
CDS-3UTR CAA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGGTAGCTAACTTTTCTTaGATGAGCCAAAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRVANFS*MSQSFF
Trigger: GAAGAAGCTTTGGCTCATCAAAGAAAAGTTAGCTAC...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGATCTACAGTGCTACTTaGTCGTCTGTAATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKIYSAT*SSVIGN
Trigger: ATTTCCAATTACAGACGACAAAGTAGCACTGTAGAT...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp CTTTGTAGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCAAAATTTCCAACTCTaGTTTGAGCTGAAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LCRLGYKSVQIWLQNVTTQNFQL*FELKKQ
Trigger: CTGCTTCTTCAGCTCAAACAAGAGTTGGAAATTTTG...GGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCTACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp AGACTTGGCTACAAATCTGTGCAGATTTGGTTGCAAAATGTTACTACCCTGACATATGCTGCATCTCCTTaGCTGTCTCATTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: RLGYKSVQIWLQNVTTLTYAASP*LSHLNS
Trigger: AGAATTTAAATGAGACAGCAAAGGAGATGCAGCATA...TGTCAGGGTAGTAACATTTTGCAACCAAATCTGCACAGATTTGTAGCCAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR CAA 90 bp ACTGACTCAATATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGGAGAGCATACACATTTaGATTTTACCTGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: TDSIYFCQGPTIKTVLLKESIHI*ILPVLK
Trigger: TTTGAGGACAGGTAAAATCAAAATGTGTATGCTCTC...CTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTATATTGAGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS-3UTR CAA 90 bp ATACTTCTGCCAAGGTCCCACCATCAAAACTGTCTTATTGAAGTTAACTTAAGGATCTACAGTGCTACTTaGTCGTCTGTAATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ILLPRSHHQNCLIEVNLRIYSAT*SSVIGN
Trigger: ATTTCCAATTACAGACGACAAAGTAGCACTGTAGAT...CCTTAAGTTAACTTCAATAAGACAGTTTTGATGGTGGGACCTTGGCAGAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS-3UTR CAA 90 bp ATGAAAAGAGCTGTTAAGCACTTTGTAGACTTGGCTACAAATCTGTGCAGATTTACTTTCAAATTCTCTTaGAGGACTGCATTTTCACAG +
Preference number: 5 (lower is better)
Translates to: MKRAVKHFVDLATNLCRFTFKFS*RTAFSQ
Trigger: CTGTGAAAATGCAGTCCTCAAAGAGAATTTGAAAGT...AAATCTGCACAGATTTGTAGCCAAGTCTACAAAGTGCTTAACAGCTCTTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000619386.1
CDS CCA 72 bp TCCTACCGCCCCGGCGCCCCACTCAGCTCGCTCACCTaGCAAGTAGCCTCCTCTCCGTGCGCGTGCGCCGCT +
Preference number: 6 (lower is better)
Translates to: SYRPGAPLSSLT*QVASSPCACAA
Trigger: AGCGGCGCACGCGCACGGAGAGGAGGCTACTTGCCAGGTGAGCGAGCTGAGTGGGGCGCCGGGGCGGTAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396496.7
CDS CAA 90 bp CGTGGGCAGGGCCCAGGGTCCCCGTGCTGTGTGCAGTCTAAGGACTaGGTGCCCTGCGTCCCAGCCACTCCAGCGGTGGCTGAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: RGQGPGSPCCVQSKD*VPCVPATPAVAERG
Trigger: GCCCCTTTCAGCCACCGCTGGAGTGGCTGGGACGCAGGGCACCAAGTCCTTAGACTGCACACAGCACGGGGACCCTGGGCCCTGCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512045.5
CDS CCA 72 bp GCCCAGGGTCCCCGTGCTGTGTGCAGTCTAAGGACTTaGTGCCCTGCGTCCCAGCCACTCCAGCGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: AQGPRAVCSLRT*CPASQPLQRWL
Trigger: CAGCCACCGCTGGAGTGGCTGGGACGCAGGGCACCAAGTCCTTAGACTGCACACAGCACGGGGACCCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS GCA 72 bp GGTTTCGTGGGCAGGGCCCAGGGTCCCCGTGCTGTGTaGAGTCTAAGGACTTGGTGCCCTGCGTCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: GFVGRAQGPRAV*SLRTWCPASQP
Trigger: TGGCTGGGACGCAGGGCACCAAGTCCTTAGACTGCACACAGCACGGGGACCCTGGGCCCTGCCCACGAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512045.5
CDS GCA 72 bp TCCCCGTGCTGTGTGCAGTCTAAGGACTTGGTGCCCTaGGTCCCAGCCACTCCAGCGGTGGCTGAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: SPCCVQSKDLVP*VPATPAVAERG
Trigger: GCCCCTTTCAGCCACCGCTGGAGTGGCTGGGACGCAGGGCACCAAGTCCTTAGACTGCACACAGCACGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS GCA 72 bp GGTTTTGTGGGCAGGGCCCAGGGTCCCCGTGCTGTGTaGAGTCTAAGGACTTGGTGCCCTGCGTCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: GFVGRAQGPRAV*SLRTWCPASQP
Trigger: TGGCTGGGACGCAGGGCACCAAGTCCTTAGACTGCACACAGCACGGGGACCCTGGGCCCTGCCCACAAAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611691.4
CDS GCA 72 bp CAGCCTGTGAAAGCAGCCAGGAGGGAGGCTGTACTCTaGAAAGCCACAGGGGCGGAGCTGCCCAAGGCCATG +
Preference number: 6 (lower is better)
Translates to: QPVKAARREAVL*KATGAELPKAM
Trigger: CATGGCCTTGGGCAGCTCCGCCCCTGTGGCTTTGCAGAGTACAGCCTCCCTCCTGGCTGCTTTCACAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS GCA 72 bp CAGGGTCCCCGTGCTGTGTGCAGTCTAAGGACTTGGTaGCCTGCGTCCCAGCCACTCCAGCGGTGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: QGPRAVCSLRTW*PASQPLQRWLK
Trigger: TTTCAGCCACCGCTGGAGTGGCTGGGACGCAGGGCACCAAGTCCTTAGACTGCACACAGCACGGGGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS GCA 72 bp GGGAGGCTGTACTCTGCAAAGCCACAGGGGCGGAGCTaGCCAAGGCCATGGGAACCCACCTCTTGCATCAGT +
Preference number: 6 (lower is better)
Translates to: GRLYSAKPQGRS*PRPWEPTSCIS
Trigger: ACTGATGCAAGAGGTGGGTTCCCATGGCCTTGGGCAGCTCCGCCCCTGTGGCTTTGCAGAGTACAGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS TCA 72 bp CTTGGTGCCCTGCGTCCCAGCCACTCCAGCGGTGGCTaGAAGGGGCCAAGGTACAGCTCCGTCTGTGAATAT +
Preference number: 6 (lower is better)
Translates to: LGALRPSHSSGG*KGPRYSSVCEY
Trigger: ATATTCACAGACGGAGCTGTACCTTGGCCCCTTTCAGCCACCGCTGGAGTGGCTGGGACGCAGGGCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CCA 72 bp GGAGAACCGGGGCTAGGGCACTACAGAAGGGAAATGTaGGGTTGGAGCCCCCACACAGAGTCCCTACTACAG +
Preference number: 6 (lower is better)
Translates to: GEPGLGHYRREM*GWSPHTESLLQ
Trigger: CTGTAGTAGGGACTCTGTGTGGGGGCTCCAACCCCACATTTCCCTTCTGTAGTGCCCTAGCCCCGGTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CCA 72 bp GCTGAAGAAGCAGTTTCCGAGTGGATGCTGCCATTCTaGCACAAGAACAGGGGTTCCCTCCGGGCCCATGAC +
Preference number: 6 (lower is better)
Translates to: AEEAVSEWMLPF*HKNRGSLRAHD
Trigger: GTCATGGGCCCGGAGGGAACCCCTGTTCTTGTGCCAGAATGGCAGCATCCACTCGGAAACTGCTTCTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS CAA 90 bp AAAGCCACAGGGGCGGAGCTGCCCAAGGCCATGGGAACCCACCTCTaGCATCAGTATGACCTGGATGTGAGACCTGGAGTCAAAGGAGAT +
Preference number: 6 (lower is better)
Translates to: KATGAELPKAMGTHL*HQYDLDVRPGVKGD
Trigger: ATCTCCTTTGACTCCAGGTCTCACATCCAGGTCATACTGATGCAAGAGGTGGGTTCCCATGGCCTTGGGCAGCTCCGCCCCTGTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS TCA 72 bp ACAGAGTCCCTACTACAGCACTGCCTAGTGGAGCTATaGGAAGAGGGCCACCATCCTCCAGACCCCAGAATG +
Preference number: 6 (lower is better)
Translates to: TESLLQHCLVEL*EEGHHPPDPRM
Trigger: CATTCTGGGGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCACTAGGCAGTGCTGTAGTAGGGACTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS TCA 72 bp GCCCAAGGCCATGGGAACCCACCTCTTGCATCAGTATaGCCTGGATGTGAGACCTGGAGTCAAAGGAGATCA +
Preference number: 6 (lower is better)
Translates to: AQGHGNPPLASV*PGCETWSQRRS
Trigger: TGATCTCCTTTGACTCCAGGTCTCACATCCAGGTCATACTGATGCAAGAGGTGGGTTCCCATGGCCTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS GCA 72 bp CTCTTGTTTGAGCTGAAGAAGCAGTTTCCGAGTGGATaGTGCCATTCTGGCACAAGAACAGGGGTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LLFELKKQFPSG*CHSGTRTGVPS
Trigger: GGAGGGAACCCCTGTTCTTGTGCCAGAATGGCAGCATCCACTCGGAAACTGCTTCTTCAGCTCAAACAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS TCA 72 bp ACTGTCCTGGTCTTCCATCCTCTTAGAACTGTTTTCTaGAGGGAGCATACCCAACAGTCTCTGCCCGAAGGT +
Preference number: 6 (lower is better)
Translates to: TVLVFHPLRTVF*REHTQQSLPEG
Trigger: ACCTTCGGGCAGAGACTGTTGGGTATGCTCCCTTCAGAAAACAGTTCTAAGAGGATGGAAGACCAGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS CAA 72 bp CATTTTCTCTTGCTGCTGCCATGTTATAAGTGCCTTTaGCCTCCCACCATGATTCTGAGACCTCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: HFLLLLPCYKCL*PPTMILRPPQP
Trigger: TGGCTGGGGAGGTCTCAGAATCATGGTGGGAGGCAAAAGGCACTTATAACATGGCAGCAGCAAGAGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611691.4
CDS CAA 90 bp CATCTCTCTCATTTTCTCTTGCTGCTGCCATGTTATAAGTGCCTTTaGCCTCCCACCATGATTCTGAGACCTCCCCAGCCATGTGGAACT +
Preference number: 6 (lower is better)
Translates to: HLSHFLLLLPCYKCL*PPTMILRPPQPCGT
Trigger: AGTTCCACATGGCTGGGGAGGTCTCAGAATCATGGTGGGAGGCAAAAGGCACTTATAACATGGCAGCAGCAAGAGAAAATGAGAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611691.4
CDS TCA 72 bp CACAGCACATGTTTTCCTGAGCCATCTTCTGCTGTTTaGTATCAAGCATGGCGAGGGCCTCCAAATACCGTT +
Preference number: 6 (lower is better)
Translates to: HSTCFPEPSSAV*YQAWRGPPNTV
Trigger: AACGGTATTTGGAGGCCCTCGCCATGCTTGATATCAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS TCA 72 bp TGGGAACCCACCTCTTGCATCAGTATGACCTGGATGTaGGACCTGGAGTCAAAGGAGATCATTTTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: WEPTSCISMTWM*DLESKEIILEL
Trigger: AAGCTCCAAAATGATCTCCTTTGACTCCAGGTCTCACATCCAGGTCATACTGATGCAAGAGGTGGGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CAA 72 bp TCCAGGCTGAGGCGGTCTCAGATGGAGATGAGGAACTaGTTGGGAACTAGAGTAAAGGTGACTCTTGTTATG +
Preference number: 6 (lower is better)
Translates to: SRLRRSQMEMRN*LGTRVKVTLVM
Trigger: CATAACAAGAGTCACCTTTACTCTAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCGCCTCAGCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CAA 72 bp GTGGAAGCTACTTTGAAACTGGGTAACAGGCAGAGATaGGGACAGTTTGGAGGGCTCAGAAGAAGACAGGAA +
Preference number: 6 (lower is better)
Translates to: VEATLKLGNRQR*GQFGGLRRRQE
Trigger: TTCCTGTCTTCTTCTGAGCCCTCCAAACTGTCCCAATCTCTGCCTGTTACCCAGTTTCAAAGTAGCTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512045.5
CDS CAA 90 bp CCCAAAAATGTGGAAGCTACTTTGAAACTGGGTAACAGGCAGAGATaGGGACAGTTTGGAGGGCTCAGAAGAAGACAGGAAAATGTGGGA +
Preference number: 6 (lower is better)
Translates to: PKNVEATLKLGNRQR*GQFGGLRRRQENVG
Trigger: TCCCACATTTTCCTGTCTTCTTCTGAGCCCTCCAAACTGTCCCAATCTCTGCCTGTTACCCAGTTTCAAAGTAGCTTCCACATTTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512045.5
CDS GCA 72 bp GAACTGTTTTCTGAAGGGAGCATACCCAACAGTCTCTaGCCGAAGGTCTTCTTACTCCTTGGTGATGGAAAT +
Preference number: 6 (lower is better)
Translates to: ELFSEGSIPNSL*PKVFLLLGDGN
Trigger: ATTTCCATCACCAAGGAGTAAGAAGACCTTCGGGCAGAGACTGTTGGGTATGCTCCCTTCAGAAAACAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS CAA 72 bp TACCCAACAGTCTCTGCCCGAAGGTCTTCTTACTCCTaGGTGATGGAAATCCTCTTGTTTGAGCTGAAGAAG +
Preference number: 6 (lower is better)
Translates to: YPTVSARRSSYS*VMEILLFELKK
Trigger: CTTCTTCAGCTCAAACAAGAGGATTTCCATCACCAAGGAGTAAGAAGACCTTCGGGCAGAGACTGTTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460090.5
ENST00000615018.4
CDS CAA 72 bp GTGGAAGCTACTTTGAAACTGGGTAACAGGCAGAGATaGGGACAGTTTGGAGGGCTCAGAAGAAGACATGAA +
Preference number: 6 (lower is better)
Translates to: VEATLKLGNRQR*GQFGGLRRRHE
Trigger: TTCATGTCTTCTTCTGAGCCCTCCAAACTGTCCCAATCTCTGCCTGTTACCCAGTTTCAAAGTAGCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611691.4
CDS CAA 90 bp CCCAAAAATGTGGAAGCTACTTTGAAACTGGGTAACAGGCAGAGATaGGGACAGTTTGGAGGGCTCAGAAGAAGACATGAAAATGTGGGA +
Preference number: 6 (lower is better)
Translates to: PKNVEATLKLGNRQR*GQFGGLRRRHENVG
Trigger: TCCCACATTTTCATGTCTTCTTCTGAGCCCTCCAAACTGTCCCAATCTCTGCCTGTTACCCAGTTTCAAAGTAGCTTCCACATTTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611691.4
CDS TCA 72 bp TCTGCAAAGCCACTTTTATCACAGCACATGTTTTCCTaGGCCATCTTCTGCTGTTTGATATCAAGCATGGCG +
Preference number: 6 (lower is better)
Translates to: SAKPLLSQHMFS*AIFCCLISSMA
Trigger: CGCCATGCTTGATATCAAACAGCAGAAGATGGCTCAGGAAAACATGTGCTGTGATAAAAGTGGCTTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS CAA 72 bp TTGATTTTACCAGCTCATAGGCAGAAGGGACTTGCCTaGTCTCAGATGAGACTTTGGACTGTGGATTTTTGG +
Preference number: 6 (lower is better)
Translates to: LILPAHRQKGLA*SQMRLWTVDFW
Trigger: CCAAAAATCCACAGTCCAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCTGCCTATGAGCTGGTAAAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS TCA 72 bp TCATTAAGCAAATCTATGAGCATCTTAAGGACCTCTTaGGGACTGTCCTGGTCTTCCATCCTCTTAGAACTG +
Preference number: 6 (lower is better)
Translates to: SLSKSMSILRTS*GLSWSSILLEL
Trigger: CAGTTCTAAGAGGATGGAAGACCAGGACAGTCCTCAAGAGGTCCTTAAGATGCTCATAGATTTGCTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
CDS CAA 90 bp ACCTCCAGTGCTACTTTGTCGTCTGTAATTGGAAATTCTGGACACTaGAGGGAATGTATCTTGCTGGCTCTTATGCTTGGAATACTGAAA +
Preference number: 6 (lower is better)
Translates to: TSSATLSSVIGNSGH*RECILLALMLGILK
Trigger: TTTCAGTATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS TCA 72 bp GGGAATGTATCTTGCTGGCTCTTATGCTTGGAATACTaGAAACTCGCTTCATTTCTTTCTTCTCCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: GNVSCWLLCLEY*KLASFLSSPFL
Trigger: GAGAAAGGGAGAAGAAAGAAATGAAGCGAGTTTTCAGTATTCCAAGCATAAGAGCCAGCAAGATACATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000512045.5
ENST00000513172.1
ENST00000610685.4
ENST00000611691.4
ENST00000619386.1
ENST00000620431.4
ENST00000621007.1
CDS TCA 72 bp TTGCTGAAAAGATACCCAAAAATGTGGAAGCTACTTTaGAACTGGGTAACAGGCAGAGATTGGGACAGTTTG +
Preference number: 6 (lower is better)
Translates to: LLKRYPKMWKLL*NWVTGRDWDSL
Trigger: CAAACTGTCCCAATCTCTGCCTGTTACCCAGTTTCAAAGTAGCTTCCACATTTTTGGGTATCTTTTCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CAA 72 bp GTAATTGGAAATTCTGGACACTTGAGGGAATGTATCTaGCTGGCTCTTATGCTTGGAATACTGAAAACTCGC +
Preference number: 6 (lower is better)
Translates to: VIGNSGHLRECI*LALMLGILKTR
Trigger: GCGAGTTTTCAGTATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000460090.5
ENST00000511257.1
ENST00000512045.5
ENST00000513172.1
ENST00000610685.4
ENST00000611691.4
ENST00000612469.4
ENST00000615018.4
ENST00000619386.1
ENST00000620431.4
ENST00000621007.1
CDS CAA 72 bp GAGGGCTCAGAAGAAGACATGAAAATGTGGGAAAGATaGGAACTTTCTAGAGACTTGTTGAGTGTCTTTCAC +
Preference number: 6 (lower is better)
Translates to: EGSEEDMKMWER*ELSRDLLSVFH
Trigger: GTGAAAGACACTCAACAAGTCTCTAGAAAGTTCCAATCTTTCCCACATTTTCATGTCTTCTTCTGAGCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611691.4
CDS CAA 90 bp CGAATCAGTGCTACTTTGTCGTCTGTAATTGGAAATTCTGGACACTaGAGGGAATGTATCTTGCTGGCTCTTATGCTTGGAATACTGAAA +
Preference number: 6 (lower is better)
Translates to: RISATLSSVIGNSGH*RECILLALMLGILK
Trigger: TTTCAGTATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGATTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383374.6
ENST00000511257.1
ENST00000610685.4
ENST00000612469.4
CDS CAA 90 bp GACAGTTTGGAGGGCTCAGAAGAAGACAGGAAAATGTGGGAAAGATaGGAACTTTCTAGAGACTTGTTGAGTGTCTTTCACAAAAACACT +
Preference number: 6 (lower is better)
Translates to: DSLEGSEEDRKMWER*ELSRDLLSVFHKNT
Trigger: AGTGTTTTTGTGAAAGACACTCAACAAGTCTCTAGAAAGTTCCAATCTTTCCCACATTTTCCTGTCTTCTTCTGAGCCCTCCAAACTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512045.5
CDS CAA 90 bp ATCTACAGTGCTACTTTGTCGTCTGTAATTGGAAATTCTGGACACTaGAGGGAATGTATCTTGCTGGCTCTTATGCTTGGAATACTGAAA +
Preference number: 6 (lower is better)
Translates to: IYSATLSSVIGNSGH*RECILLALMLGILK
Trigger: TTTCAGTATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396496.7
ENST00000396499.5
ENST00000513172.1
ENST00000619386.1
ENST00000620431.4
ENST00000621007.1
CDS CAA 90 bp CAAAACAGTGCTACTTTGTCGTCTGTAATTGGAAATTCTGGACACTaGAGGGAATGTATCTTGCTGGCTCTTATGCTTGGAATACTGAAA +
Preference number: 6 (lower is better)
Translates to: QNSATLSSVIGNSGH*RECILLALMLGILK
Trigger: TTTCAGTATTCCAAGCATAAGAGCCAGCAAGATACATTCCCTCAAGTGTCCAGAATTTCCAATTACAGACGACAAAGTAGCACTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460090.5
ENST00000615018.4
CDS CAA 90 bp GACAGTTTGGAGGGCTCAGAAGAAGACATGAAAATGTGGGAAAGATaGGAACTTTCTAGAGACTTGTTGAGTGTCTTTCACAAAAACACT +
Preference number: 6 (lower is better)
Translates to: DSLEGSEEDMKMWER*ELSRDLLSVFHKNT
Trigger: AGTGTTTTTGTGAAAGACACTCAACAAGTCTCTAGAAAGTTCCAATCTTTCCCACATTTTCATGTCTTCTTCTGAGCCCTCCAAACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611691.4
CDS GCA 72 bp TCTTGTTATGTTTTAGCAAAGAGATTTGTGGCATTTTaGCCCTGCCCTAGAGATCTGTGGAACTTTGAACTT +
Preference number: 6 (lower is better)
Translates to: SCYVLAKRFVAF*PCPRDLWNFEL
Trigger: AAGTTCAAAGTTCCACAGATCTCTAGGGCAGGGGCAAAATGCCACAAATCTCTTTGCTAAAACATAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS GCA 72 bp TGTCCATCAACTGGTGAATGCATAAGCAAAACATGGTaGATCTACACAATGGAGTATTACTTGGCAATAAAA +
Preference number: 6 (lower is better)
Translates to: CPSTGECISKTW*IYTMEYYLAIK
Trigger: TTTTATTGCCAAGTAATACTCCATTGTGTAGATGCACCATGTTTTGCTTATGCATTCACCAGTTGATGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CCA 72 bp AAATGTCCATCAACTGGTGAATGCATAAGCAAAACATaGTGCATCTACACAATGGAGTATTACTTGGCAATA +
Preference number: 6 (lower is better)
Translates to: KCPSTGECISKT*CIYTMEYYLAI
Trigger: TATTGCCAAGTAATACTCCATTGTGTAGATGCACCATGTTTTGCTTATGCATTCACCAGTTGATGGACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS CCA 72 bp GAAATTTCTAAGCAGCAAAGCATTCAAGAGATGGCTTaGGTACTGTTAAAGGCATTCCATTTTAAAAGGGAA +
Preference number: 6 (lower is better)
Translates to: EISKQQSIQEMA*VLLKAFHFKRE
Trigger: TTCCCTTTTAAAATGGAATGCCTTTAACAGTACCCAAGCCATCTCTTGAATGCTTTGCTGCTTAGAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512045.5
ENST00000611691.4
CDS TCA 72 bp ATTTTCAATGCTTCCTCTTTACCTCTGAGTTGTCTTTaGGATGCCTCAAGTTCAGTTTTTAACATTTCTACC +
Preference number: 6 (lower is better)
Translates to: IFNASSLPLSCL*DASSSVFNIST
Trigger: GGTAGAAATGTTAAAAACTGAACTTGAGGCATCTCAAAGACAACTCAGAGGTAAAGAGGAAGCATTGAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000383374.6
ENST00000396496.7
ENST00000396499.5
ENST00000511257.1
ENST00000512045.5
ENST00000610685.4
ENST00000611691.4
ENST00000612469.4
ENST00000619386.1
ENST00000620431.4