Pregenerated sensors for CCDC122 (Homo sapiens)
Ensembl gene IDs: ENSG00000151773Ensembl transcript IDs: ENST00000444614.8, ENST00000470137.5, ENST00000476570.2, ENST00000611737.1, ENST00000614023.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTATTTTGAGGAGTCTTTGATATCTAAGAATGGGCATCCTCTTTaGCTACATAGCTGCTTTCTAGCCATTAATTGGGTATCATGTTCT | + |
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Preference number: 1 (lower is better) Translates to: FYFEESLISKNGHPL*LHSCFLAINWVSCS Trigger: AGAACATGATACCCAATTAATGGCTAGAAAGCAGCTATGTAGTCAAAGAGGATGCCCATTCTTAGATATCAAAGACTCCTCAAAATAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| 3UTR-3UTR TCA 90 bp | TTGACTCTTGATAATTGCGAATATGAAGTCAGAGAGGTTTGGAAAGACGATGCTAATGGGCATCCTCTTTaGCTACATAGCTGCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LTLDNCEYEVREVWKDDANGHPL*LHSCFL Trigger: TAGAAAGCAGCTATGTAGTCAAAGAGGATGCCCATT...AGCATCGTCTTTCCAAACCTCTCTGACTTCATATTCGCAATTATCAAGAGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| 3UTR-3UTR CCA 90 bp | TTCATCCAAACAATAATGACAATAGAAGTCCACAGGCAGCACCACAACACATTAGAAGTCAGAGAGGTTTaGAAAGACGATGCTTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: FIQTIMTIEVHRQHHNTLEVREV*KDDAFH Trigger: ATGGAAAGCATCGTCTTTCCAAACCTCTCTGACTTC...TAATGTGTTGTGGTGCTGCCTGTGGACTTCTATTGTCATTATTGTTTGGATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| 3UTR-3UTR TCA 90 bp | TTAATTGGGTATCATGTTCTTAGTGGAATGAGAAAAACCTGGAAGAACCCTCGCACACATTCACATATTTaGACATCTTTGAATGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LIGYHVLSGMRKTWKNPRTHSHI*TSLNEG Trigger: CCCCTCATTCAAAGATGTTCAAATATGTGAATGTGT...GCGAGGGTTCTTCCAGGTTTTTCTCATTCCACTAAGAACATGATACCCAATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| 3UTR GCA 72 bp | GGAAGCGGAGCTTGCAGTGAGCCGAGACTGCGCCACTaGAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGA | + |
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Preference number: 3 (lower is better) Translates to: GSGACSEPRLRH*SPQSGLGDRAR Trigger: TCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAGTCTCGGCTCACTGCAAGCTCCGCTTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| 3UTR TCA 72 bp | GGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTaGGCCGAGACTGCGCCACTGCAGTCCGCAGTCCGG | + |
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Preference number: 3 (lower is better) Translates to: GEWREPRKRSLQ*AETAPLQSAVR Trigger: CCGGACTGCGGACTGCAGTGGCGCAGTCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| 3UTR TCA 72 bp | GAGGAGTCTTTGATATCTAAGAATGGGCATCCTCTTTaGCTACATAGCTGCTTTCTAGCCATTAATTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: EESLISKNGHPL*LHSCFLAINWV Trigger: TACCCAATTAATGGCTAGAAAGCAGCTATGTAGTCAAAGAGGATGCCCATTCTTAGATATCAAAGACTCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| 3UTR-3UTR CAA 90 bp | TTGACTCTTGATAATTGCGAATATGAAGTCAGAGAGGTTTGGAAAGACGATGCTAATAGGAGTGAATGCTaGCATTGTTTGAACACATTC | + |
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Preference number: 3 (lower is better) Translates to: LTLDNCEYEVREVWKDDANRSEC*HCLNTF Trigger: GAATGTGTTCAAACAATGCAAGCATTCACTCCTATT...AGCATCGTCTTTCCAAACCTCTCTGACTTCATATTCGCAATTATCAAGAGTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| CDS-3UTR CCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGCCGCCTCCCGGCAGCTaGCACGAGGGAACCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLPPPGS*HEGTWP Trigger: CGGCCAGGTTCCCTCGTGCCAGCTGCCGGGAGGCGG...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR GCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCCCAGGAAGCGGAGCTTaGAGTGAGCCGAGACTGCGC | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIPGSGA*SEPRLR Trigger: GCGCAGTCTCGGCTCACTGCAAGCTCCGCTTCCTGG...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCTGGCACGAGGGAACCTaGCCGTCAGGTTTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIWHEGT*PSGFPW Trigger: CCAGGGGAAACCTGACGGCCAGGTTCCCTCGTGCCA...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCTTTCCCCTGGGATCCTaGGACGGTATCAGGCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIFPLGS*DGIRRG Trigger: TCCCCGCCTGATACCGTCCCAGGATCCCAGGGGAAA...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCCCGTCAGGTTTCCCCTaGGATCCTGGGACGGTATCA | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIPSGFP*DPGTVS Trigger: TGATACCGTCCCAGGATCCCAGGGGAAACCTGACGG...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR TCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCCCACTGTCGTCTATTTaGCTGAAGCTTGTTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIPLSSI*LKLVHL Trigger: CAGGTGAACAAGCTTCAGTCAAATAGACGACAGTGG...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR GCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGGTCTGTGTTCCACATTaGCCTATGGCAATGTTACTC | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLVCVPH*PMAMLL Trigger: GAGTAACATTGCCATAGGGCAATGTGGAACACAGAC...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CCA 90 bp | TTCATCCAAACAATAATGACAATAGAAGTCCACAGGCAGCACCACAACACATTAGGAATGAGAAAAACCTaGAAGAACCCTCGCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: FIQTIMTIEVHRQHHNTLGMRKT*KNPRPD Trigger: ATCTGGGCGAGGGTTCTTCCAGGTTTTTCTCATTCC...TAATGTGTTGTGGTGCTGCCTGTGGACTTCTATTGTCATTATTGTTTGGATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| CDS-3UTR TCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCTCCAGGCTATCACAATaGAGTTTGGTATTCTCTATG | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAISRLSQ*SLVFSM Trigger: CATAGAGAATACCAAACTTCATTGTGATAGCCTGGA...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR TCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGGAGTTCAGTCATAAATaGCCATTTGCTCTCTACTTC | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLEFSHK*PFALYF Trigger: GAAGTAGAGAGCAAATGGTCATTTATGACTGAACTC...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR TCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGTTCCCTCCTGGATTTTaGAGATCTTGCATAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLFPPGF*RSCISS Trigger: AGAACTTATGCAAGATCTTCAAAATCCAGGAGGGAA...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR TCA 90 bp | AGAAAAACCTGGAAGAACCCTCGCCCAGATTTAAATAGGAGTGAATGCTTGCATATTTTGAGGAGTCTTTaGTATCTAAGAATGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: RKTWKNPRPDLNRSECLHILRSL*YLRMGI Trigger: GATGCCCATTCTTAGATATCAAAGACTCCTCAAAAT...ATGCAAGCATTCACTCCTATTTAAATCTGGGCGAGGGTTCTTCCAGGTTTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| CDS-3UTR CCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCGATTACTTCCTTTTCTaGCCAGGCAATGAGATTAGA | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIDYFLF*PGNEIR Trigger: TCTAATCTCATTGCCTGGCCAGAAAAGGAAGTAATC...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCTTCCACATTGCCCTATaGCAATGTTACTCTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIFHIAL*QCYSCI Trigger: AATGCAAGAGTAACATTGCCATAGGGCAATGTGGAA...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CCA 90 bp | TTGACTCTTGATAATTGCGAATATGAAGTCAGAGAGGTTTGGAAAGACGATGCTGAAGTCAGAGAGGTTTaGAAAGACGATGCTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LTLDNCEYEVREVWKDDAEVREV*KDDAFH Trigger: ATGGAAAGCATCGTCTTTCCAAACCTCTCTGACTTC...AGCATCGTCTTTCCAAACCTCTCTGACTTCATATTCGCAATTATCAAGAGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| CDS-3UTR TCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGTGTAAGGATTTGATTTaGGTTTCCAGGCTATCACAA | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLCKDLI*VSRLSQ Trigger: TTGTGATAGCCTGGAAACTCAAATCAAATCCTTACA...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR TCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGCTGAATGTAAGGATTTaGTTTGAGTTTCCAGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLLNVRI*FEFPGY Trigger: ATAGCCTGGAAACTCAAATCAAATCCTTACATTCAG...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR TCA 90 bp | TTGACTCTTGATAATTGCGAATATGAAGTCAGAGAGGTTTGGAAAGACGATGCTATGTTCTTAGTGGAATaGGAAAAACCTGGAAGAACC | + |
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Preference number: 4 (lower is better) Translates to: LTLDNCEYEVREVWKDDAMFLVE*EKPGRT Trigger: GGTTCTTCCAGGTTTTTCTCATTCCACTAAGAACAT...AGCATCGTCTTTCCAAACCTCTCTGACTTCATATTCGCAATTATCAAGAGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| CDS-3UTR GCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGGCTTGTGATTGTTGTTaGTTTGCAACTTTCTCTACA | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLACDCC*FATFST Trigger: TGTAGAGAAAGTTGCAAAGCAACAACAATCACAAGC...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR GCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGACTCTTGCATTCCAATaGATTTTCTTAATTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLTLAFQ*IFLIRL Trigger: CAGCCGAATTAAGAAAATGCATTGGAATGCAAGAGT...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR GCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGTGTTTCTTTAGTTTCTaGAGAGATAGCTGCTATTTC | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLCFFSF*RDSCYF Trigger: GAAATAGCAGCTATCTCTGCAGAAACTAAAGAAACA...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR GCA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCCAAACGCTTAAGAATTaGATCATACCTCTTATGTTG | + |
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Preference number: 4 (lower is better) Translates to: ETLALFSRRHSYCLSTAIQTLKN*IIPLML Trigger: CAACATAAGAGGTATGATGCAATTCTTAAGCGTTTG...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CCA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGAAATCTCGCTTTTCATaGAGTTCAGTCATAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLKSRFS*SSVIND Trigger: GTCATTTATGACTGAACTCCATGAAAAGCGAGATTT...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS CCA 90 bp | CCTCCCGGCAGCTGGCACGAGGGAACCTGGCCGTCAGGTTTCCCCTaGGATCCTGGGACGGTATCAGGCGGGGAATCTGTGCGGCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: PPGSWHEGTWPSGFP*DPGTVSGGESVRPR Trigger: CCGCGGCCGCACAGATTCCCCGCCTGATACCGTCCCAGGATCCCAGGGGAAACCTGACGGCCAGGTTCCCTCGTGCCAGCTGCCGGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS CCA 90 bp | ACCAGTACCGCTGAATCTGCTGACACTAGGGATTACTTCCTTTTCTaGCCAGGCAATGAGATTAGAGTTTCAGGGCACTCCCTCCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: TSTAESADTRDYFLF*PGNEIRVSGHSLPP Trigger: AGGCGGGAGGGAGTGCCCTGAAACTCTAATCTCATTGCCTGGCCAGAAAAGGAAGTAATCCCTAGTGTCAGCAGATTCAGCGGTACTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000444614.8 ENST00000476570.2 ENST00000611737.1 |
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| CDS CCA 90 bp | CTGGATGTTCTCACTTATAAGTGGGAGCTAAATGATGAGAACTTATaGACACATAGAGGGAAACAACACACACTGGAGGGTGAGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LDVLTYKWELNDENL*THRGKQHTLEGERR Trigger: CCTCCTCTCACCCTCCAGTGTGTGTTGTTTCCCTCTATGTGTCCATAAGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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| CDS GCA 90 bp | CTCCTATATAACACCAATCAAACTGAGTCAAATCCCATTCACAGTTaGCACACACACACACACACACACACACACACACCCCTAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: LLYNTNQTESNPIHS*HTHTHTHTHTPLRT Trigger: TGTTCTTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAACTGTGAATGGGATTTGACTCAGTTTGATTGGTGTTATATAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCGCCACTGTCGTCTATTaGACTGAAGCTTGTTCACCT | + |
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Preference number: 5 (lower is better) Translates to: ETLALFSRRHSYCLSTAIATVVY*TEACSP Trigger: AGGTGAACAAGCTTCAGTCAAATAGACGACAGTGGC...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CAA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGGGTCTGTGTTCCACATaGCCCTATGGCAATGTTACT | + |
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Preference number: 5 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLGLCST*PYGNVT Trigger: AGTAACATTGCCATAGGGCAATGTGGAACACAGACC...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS TCA 90 bp | GTCCTTTGCAGGAACATGAATGGAGCTGGAGGCCACTATCCTAAGTaGATTAATGCAGAAACAGAAAACCAAATACTGGATGTTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: VLCRNMNGAGGHYPK*INAETENQILDVLT Trigger: AGTGAGAACATCCAGTATTTGGTTTTCTGTTTCTGCATTAATTCACTTAGGATAGTGGCCTCCAGCTCCATTCATGTTCCTGCAAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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| CDS-3UTR CAA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCAATGTCTTCCTGTACTaGTGTTATTCGGTTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ETLALFSRRHSYCLSTAINVFLY*CYSVPS Trigger: GGAGGGAACCGAATAACACAAGTACAGGAAGACATT...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS GCA 90 bp | AAAACATATACAAATAAGAAGAGAGGAAGCCAAACTAGCCCTGTTTaGAGACGACATGATGCTATATCTAGAAAACCCAACAGTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: KTYTNKKRGSQTSPV*RRHDAISRKPNSPG Trigger: GCCAGGACTGTTGGGTTTTCTAGATATAGCATCATGTCGTCTGCAAACAGGGCTAGTTTGGCTTCCTCTCTTCTTATTTGTATATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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| CDS-3UTR CAA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGGTCATAAATGACCATTaGCTCTCTACTTCCCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLVINDH*LSTSPK Trigger: TTTGGGGGAAGTAGAGAGCAAATGGTCATTTATGAC...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CAA 90 bp | GAGACTCTTGCATTATTTTCCCGTAGACATTCCTATTGTCTGTCTACTGCTATCGTTCCCTCCTGGATTTaGAAGATCTTGCATAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: ETLALFSRRHSYCLSTAIVPSWI*KILHKF Trigger: GAACTTATGCAAGATCTTCAAAATCCAGGAGGGAAC...GATAGCAGTAGACAGACAATAGGAATGTCTACGGGAAAATAATGCAAGAGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS CCA 90 bp | ATGCTGACAAGGTTGCAGAGAAAAAGAACACTTATTATACACTGTTaGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: MLTRLQRKRTLIIHC*WECKLVQPLWKTVW Trigger: CCACACTGTCTTCCACAATGGTTGAACTAATTTACACTCCCACCAACAGTGTATAATAAGTGTTCTTTTTCTCTGCAACCTTGTCAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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| CDS-3UTR CAA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGGTGATTGTTGTTGCTTaGCAACTTTCTCTACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLVIVVA*QLSLQH Trigger: ATGCTGTAGAGAAAGTTGCAAAGCAACAACAATCAC...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CAA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGCATCAGCTAATGAACTaGTGTCTTGGTTATCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLHQLMN*CLGYLL Trigger: AAGAAGATAACCAAGACACAAGTTCATTAGCTGATG...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CAA 90 bp | AACAACAACCGAAGACATCTGTCATTAAGACAGGTCTCTAATAGTGGATGCTTGTTCCTCAAAATCTTCTaGGGCTGTTTCTATGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: NNNRRHLSLRQVSNSGCLFLKIF*GCFYVK Trigger: TTTGACATAGAAACAGCCCAAGAAGATTTTGAGGAA...CAAGCATCCACTATTAGAGACCTGTCTTAATGACAGATGTCTTCGGTTGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS-3UTR CAA 90 bp | TTCATCCAAACAATAATGACAATAGAAGTCCACAGGCAGCACCACAACACATTAAATAGGAGTGAATGCTaGCATTGTTTGAACACATTC | + |
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Preference number: 5 (lower is better) Translates to: FIQTIMTIEVHRQHHNTLNRSEC*HCLNTF Trigger: GAATGTGTTCAAACAATGCAAGCATTCACTCCTATT...TAATGTGTTGTGGTGCTGCCTGTGGACTTCTATTGTCATTATTGTTTGGATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614023.1 |
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| CDS CCA 90 bp | AATGCAGAAACAGAAAACCAAATACTGGATGTTCTCACTTATAAGTaGGAGCTAAATGATGAGAACTTATGGACACATAGAGGGAAACAA | + |
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Preference number: 5 (lower is better) Translates to: NAETENQILDVLTYK*ELNDENLWTHRGKQ Trigger: TTGTTTCCCTCTATGTGTCCATAAGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACATCCAGTATTTGGTTTTCTGTTTCTGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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| CDS CCA 72 bp | TCCCTCCCGCCTCCCGGCAGCTGGCACGAGGGAACCTaGCCGTCAGGTTTCCCCTGGGATCCTGGGACGGTA | + |
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Preference number: 6 (lower is better) Translates to: SLPPPGSWHEGT*PSGFPWDPGTV Trigger: TACCGTCCCAGGATCCCAGGGGAAACCTGACGGCCAGGTTCCCTCGTGCCAGCTGCCGGGAGGCGGGAGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444614.8 ENST00000611737.1 |
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| CDS CCA 72 bp | CGAGGGAACCTGGCCGTCAGGTTTCCCCTGGGATCCTaGGACGGTATCAGGCGGGGAATCTGTGCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RGNLAVRFPLGS*DGIRRGICAAA Trigger: CGCGGCCGCACAGATTCCCCGCCTGATACCGTCCCAGGATCCCAGGGGAAACCTGACGGCCAGGTTCCCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS CCA 72 bp | AGCTGGCACGAGGGAACCTGGCCGTCAGGTTTCCCCTaGGATCCTGGGACGGTATCAGGCGGGGAATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SWHEGTWPSGFP*DPGTVSGGESV Trigger: CACAGATTCCCCGCCTGATACCGTCCCAGGATCCCAGGGGAAACCTGACGGCCAGGTTCCCTCGTGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000444614.8 ENST00000611737.1 |
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| CDS CCA 72 bp | GCTGAATCTGCTGACACTAGGGATTACTTCCTTTTCTaGCCAGGCAATGAGATTAGAGTTTCAGGGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: AESADTRDYFLF*PGNEIRVSGHS Trigger: GGAGTGCCCTGAAACTCTAATCTCATTGCCTGGCCAGAAAAGGAAGTAATCCCTAGTGTCAGCAGATTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000444614.8 ENST00000476570.2 ENST00000611737.1 |
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| CDS CAA 72 bp | CCAATTGTTGAATGTTCCATTGCCACTGTCGTCTATTaGACTGAAGCTTGTTCACCTGACAATGCAAACGCT | + |
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Preference number: 6 (lower is better) Translates to: PIVECSIATVVY*TEACSPDNANA Trigger: AGCGTTTGCATTGTCAGGTGAACAAGCTTCAGTCAAATAGACGACAGTGGCAATGGAACATTCAACAATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS CCA 72 bp | TTTTTGTTGTCATGGTCTGTGTTCCACATTGCCCTATaGCAATGTTACTCTTGCATTCCAATGCATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLLSWSVFHIAL*QCYSCIPMHFL Trigger: AAGAAAATGCATTGGAATGCAAGAGTAACATTGCCATAGGGCAATGTGGAACACAGACCATGACAACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444614.8 |
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| CDS CCA 72 bp | AGGTTGCAGAGAAAAAGAACACTTATTATACACTGTTaGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLQRKRTLIIHC*WECKLVQPLWK Trigger: CTTCCACAATGGTTGAACTAATTTACACTCCCACCAACAGTGTATAATAAGTGTTCTTTTTCTCTGCAACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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| CDS CAA 72 bp | TTCCTGTACTTGTGTTATTCGGTTCCCTCCTGGATTTaGAAGATCTTGCATAAGTTCTTCTTTCATTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLYLCYSVPSWI*KILHKFFFHCL Trigger: AAGACAATGAAAGAAGAACTTATGCAAGATCTTCAAAATCCAGGAGGGAACCGAATAACACAAGTACAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000444614.8 ENST00000470137.5 ENST00000476570.2 |
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| CDS CCA 72 bp | ACAGAAAACCAAATACTGGATGTTCTCACTTATAAGTaGGAGCTAAATGATGAGAACTTATGGACACATAGA | + |
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Preference number: 6 (lower is better) Translates to: TENQILDVLTYK*ELNDENLWTHR Trigger: TCTATGTGTCCATAAGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACATCCAGTATTTGGTTTTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476570.2 |
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