RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC120 (Homo sapiens)

Ensembl gene IDs: ENSG00000147144

Ensembl transcript IDs: ENST00000482476.1, ENST00000496529.6, ENST00000536628.3, ENST00000597275.5, ENST00000603906.1, ENST00000603986.6, ENST00000606812.5, ENST00000620388.1

Found 882 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCCTGGCCCACCTCATAGCAGCGGGCATGGAGGAAGGGTGGGTGTaGCGGGCCCACGGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGC +
Preference number: 1 (lower is better)
Translates to: RLAHLIAAGMEEGWV*RAHGREHRPALGPR
Trigger: GCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTCCATGCCCGCTGCTATGAGGTGGGCCAGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 90 bp AAGGGTGGGTGTGGCGGGCCCACGGAAGGGAGCACAGGCCGGCGCTaGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTACCAGTCCCGC +
Preference number: 1 (lower is better)
Translates to: KGGCGGPTEGSTGRR*GPAASPEFRMYQSR
Trigger: GCGGGACTGGTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGCCCGCCACACCCACCCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 90 bp CGGCCCGGTCCACCAGCAGGGCCTCAGAACTGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGGCGCGATCGGAGGCAGGGTCCGCCC +
Preference number: 1 (lower is better)
Translates to: RPGPPAGPQNCCCGG*ELRRGRRDRRQGPP
Trigger: GGGCGGACCCTGCCTCCGATCGCGCCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGGACCGGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 90 bp GTACAGCGCCTGGCCCACCTCATAGCAGCGGGCATGGAGGAAGGGTaGGTGTGGCGGGCCCACGGAAGGGAGCACAGGCCGGCGCTGGGG +
Preference number: 1 (lower is better)
Translates to: VQRLAHLIAAGMEEG*VWRAHGREHRPALG
Trigger: CCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTCCATGCCCGCTGCTATGAGGTGGGCCAGGCGCTGTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 90 bp CCCCACCAGCGGCCCGGTCCACCAGCAGGGCCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGAAGAGGGAGGCGCGATCGGAGGCAG +
Preference number: 1 (lower is better)
Translates to: PHQRPGPPAGPQNCC*GGCELRRGRRDRRQ
Trigger: CTGCCTCCGATCGCGCCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGGACCGGGCCGCTGGTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 90 bp CTCCCCCACCAGCGGCCCGGTCCACCAGCAGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTACGAAGAGGGAGGCGCGATCGGAGG +
Preference number: 1 (lower is better)
Translates to: LPHQRPGPPAGPQNC*CGGCELRRGRRDRR
Trigger: CCTCCGATCGCGCCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGGACCGGGCCGCTGGTGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 90 bp CTCAGATCAGGGGCCAAGGCCAGGCGGCGGGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCGCGTTCCAGGGCCTCAAGAGCCAGC +
Preference number: 1 (lower is better)
Translates to: LRSGAKARRRAAAAI*CCTDTSRSRASRAS
Trigger: GCTGGCTCTTGAGGCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGCCCGCCGCCTGGCCTTGGCCCCTGATCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR TCA 90 bp CTGAGCAAGACGCATGCCCAGGCAGACTCCCTGGGTGGTGATCACTaGCCCCGTGGACAGTGGCAGTGGCTGGGGCAGCGGGAGCACTGG +
Preference number: 1 (lower is better)
Translates to: LSKTHAQADSLGGDH*PRGQWQWLGQREHW
Trigger: CCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACGGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 90 bp AGCGGGAGCACTGGGAGGCCAAGGCGGGCCCGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGCCTCCTCAGTGCATCTGCCTGGACC +
Preference number: 1 (lower is better)
Translates to: SGSTGRPRRARTSLS*SSSSCSLLSASAWT
Trigger: GGTCCAGGCAGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCGGGCCCGCCTTGGCCTCCCAGTGCTCCCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 90 bp CGGAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAATGAAGGCCTTCAGGTTTGCAGAGCT +
Preference number: 1 (lower is better)
Translates to: RRQGPPGGSPSGSPG*RTTDENEGLQVCRA
Trigger: AGCTCTGCAAACCTGAAGGCCTTCATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 90 bp TTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGATaGGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCC +
Preference number: 1 (lower is better)
Translates to: FQVWAESPLPQLPWR*VAGISVHTGVSWLP
Trigger: GGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 90 bp GTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGGGTTTGGATGCACCTCAGGGCCTTC +
Preference number: 1 (lower is better)
Translates to: VLVATAFTSRGDTGG*GHPQQRVWMHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 90 bp TGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTaGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCA +
Preference number: 1 (lower is better)
Translates to: WALSGIPPRLQSFQV*AESPLPQLPWRCVA
Trigger: TGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 90 bp CTGACTGGGGGTGGTCAGGGCAGAGGCCATGGGCACAGAGGGGGTTaGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTG +
Preference number: 1 (lower is better)
Translates to: LTGGGQGRGHGHRGG*ALSGIPPRLQSFQV
Trigger: CACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCATGGCCTCTGCCCTGACCACCCCCAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR GCA 90 bp ATGGGCACAGAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTaGAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGC +
Preference number: 1 (lower is better)
Translates to: MGTEGVGLFQASHPD*SPSKCGQRAHCPNC
Trigger: GCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 90 bp CAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCCTaGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: QSFQVWAESPLPQLP*RCVAGISVHTGVSW
Trigger: CCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR GCA 90 bp TCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTaGCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACA +
Preference number: 1 (lower is better)
Translates to: SHPDCSPSKCGQRAH*PNCPGDAWQGFLFT
Trigger: TGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 90 bp AAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGATGCGTaGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAA +
Preference number: 1 (lower is better)
Translates to: KCGQRAHCPNCPGDA*QGFLFTPESPGCPK
Trigger: TTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR GCA 90 bp CCAGGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTaGCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGT +
Preference number: 1 (lower is better)
Translates to: PGPSEVSCVLPRLES*PGQQGTYQKGSDQC
Trigger: ACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
3UTR TCA 90 bp GGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTaGGACCCGATATGGTCCATTTTATGGAGGGGGTTCCTGAATGGA +
Preference number: 1 (lower is better)
Translates to: GFLFTPESPGCPKWP*DPIWSILWRGFLNG
Trigger: TCCATTCAGGAACCCCCTCCATAAAATGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 90 bp GCCCTGAGACCCGATATGGTCCATTTTATGGAGGGGGTTCCTGAATaGAACCTGGTTGGGCATGGGAACAGGAATGAACCCAACCAGATG +
Preference number: 1 (lower is better)
Translates to: ALRPDMVHFMEGVPE*NLVGHGNRNEPNQM
Trigger: CATCTGGTTGGGTTCATTCCTGTTCCCATGCCCAACCAGGTTCCATTCAGGAACCCCCTCCATAAAATGGACCATATCGGGTCTCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR GCA 90 bp CCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTaGTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGA +
Preference number: 1 (lower is better)
Translates to: PWLQGSSSAYNLIKN*CYQCPRSPPPGPHG
Trigger: TCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR CCA 90 bp AAGAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTaGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGC +
Preference number: 1 (lower is better)
Translates to: KKTARGMRCPFLPAP*LQGSSSAYNLIKNC
Trigger: GCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
3UTR TCA 90 bp AATGGAACCTGGTTGGGCATGGGAACAGGAATGAACCCAACCAGATaGGATCACAGTTTCCCTTTTGTAAAACGCCTAGTGTTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: NGTWLGMGTGMNPTR*DHSFPFVKRLVLEE
Trigger: TTCCTCCAACACTAGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTTCCCATGCCCAACCAGGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR GCA 90 bp CACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTACCAGTCCTGTTCCACCGCCACTaGGGGGCAGGCCCCGGTCCA +
Preference number: 2 (lower is better)
Translates to: HRPALGPRSQSRVPDVPVLFHRH*GAGPGP
Trigger: TGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAG...GACTGGTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CAA 90 bp GCTCCCCCACCAGCGGCCCGGTCCACCAGCAGGGCCTCAGAACTGTaGCTGCGGCGGGTGCGAGCTACGAAGAGGGAGGCGCGATCGGAG +
Preference number: 2 (lower is better)
Translates to: APPPAARSTSRASEL*LRRVRATKREARSE
Trigger: CTCCGATCGCGCCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGGACCGGGCCGCTGGTGGGGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTACCAGTCGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT +
Preference number: 2 (lower is better)
Translates to: HRPALGPRSQSRVPDVPVASVWG*WGWPQS
Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...GACTGGTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp ACAGGGGGCGCCGTGAAACTCCTCGAGTGTGGGAGTGGCGCCTGGCTGGGGGCCCCGAGGGGATACGGGTaGGTGGGGGCATCCACAGCA +
Preference number: 2 (lower is better)
Translates to: TGGAVKLLECGSGAWLGAPRGYG*VGASTA
Trigger: TGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGG...GGCCCCCAGCCAGGCGCCACTCCCACACTCGAGGAGTTTCACGGCGCCCCCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR TCA 90 bp TGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTGCCAAGCCTTGGGTGGTaGGGGGCGCTCGGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: WHGCGGPWCGGGGCCCQLPSLGW*GALGQR
Trigger: TCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGG...CAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp GAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACGCAGGGCACAAGGAGTaGTGTGCTTGGTTGGGGTGC +
Preference number: 2 (lower is better)
Translates to: EAGSARGKPIWESWLPDHAGHKE*CAWLGC
Trigger: GCACCCCAACCAAGCACACCACTCCTTGTGCCCTGC...GTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACTGACGAGAATGCTGGTCCCAAGCCTTaGGTGGTGAGGGGCGCTCGG +
Preference number: 2 (lower is better)
Translates to: PPGGSPSGSPGCRTTDENAGPKP*VVRGAR
Trigger: CCGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGC...ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACTGACGAGAATTCAGGTTTGCAGAGCTaGGGGCCAGCGCCCCGGGTG +
Preference number: 2 (lower is better)
Translates to: PPGGSPSGSPGCRTTDENSGLQS*GPAPRV
Trigger: CACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGA...ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR TCA 90 bp GGGGAGCATGGTGAGGAGCCCATCCCGGCGGGAGAGGGGTCCTGGGACCTCAGCTCCTCTTGGCTGAGCTaGGCAAGACGCATGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GEHGEEPIPAGEGSWDLSSSWLS*ARRMPR
Trigger: CCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGA...GCTGAGGTCCCAGGACCCCTCTCCCGCCGGGATGGGCTCCTCACCATGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR GCA 90 bp GAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACCGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGC +
Preference number: 2 (lower is better)
Translates to: EAGSARGKPIWESWLPDHRTSLS*SSSSCS
Trigger: GCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCG...GTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGCACTCAGGGGGCAGCTaGCCAGTCAGCTCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKHSGGS*PVSSAS
Trigger: GGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAGTG...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CCAGTCCCGCAGCCCCTCCAGAGCCAGGTTCTTGTGGCCACTGCGTTCACCAGCTTGGTTGGGGTGCGGTaGAGGGTAGGCGCGGGCTGT +
Preference number: 2 (lower is better)
Translates to: PVPQPLQSQVLVATAFTSLVGVR*RVGAGC
Trigger: ACAGCCCGCGCCTACCCTCCACCGCACCCCAACCAA...GCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACATGGGGCTGGTGGGGCTaGCCACAGAGTTCCGCCGGC +
Preference number: 2 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTWGWWG*PQSSAG
Trigger: GCCGGCGGAACTCTGTGGCCAGCCCCACCAGCCCCA...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CCAGTCCCGCAGCCCCTCCAGAGCCAGGTTCTTGTGGCCACTGCGTTCACCAGCAGCGTGTGGGGCTGGTaGGGCTGGCCACAGAGTTCC +
Preference number: 2 (lower is better)
Translates to: PVPQPLQSQVLVATAFTSSVWGW*GWPQSS
Trigger: GGAACTCTGTGGCCAGCCCCACCAGCCCCACACGCT...GCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CAA 90 bp GAGTTCCGGATGTACCAGTCCCGCAGCCCCTCCAGAGCCAGGTTCTaGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: EFRMYQSRSPSRARF*WPLRSPAEGIRVGG
Trigger: CCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGGACTGGTACATCCGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR TCA 90 bp CAGGCCACAGGGCTTAGTGCGGGTGGCACGGGTGTGGGGGTCCTTGGTGCGGAGCTACGTCCTCTTGGCTaGGCTGAGCAAGACGCATGC +
Preference number: 2 (lower is better)
Translates to: QATGLSAGGTGVGVLGAELRPLG*AEQDAC
Trigger: GCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAG...CTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTAAGCCCTGTGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR GCA 90 bp TGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTGATGCAGCCTCCTCAGTaGATCTGCCTGGACCTGGCG +
Preference number: 2 (lower is better)
Translates to: WHGCGGPWCGGGGCCCQLMQPPQ*ICLDLA
Trigger: CGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCAT...CAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGCTCAGTGCATCTGCCTaGACCTGGCGCCGGCGCCGG +
Preference number: 2 (lower is better)
Translates to: QRGQLCAPQIGIVPRPTRLSASA*TWRRRR
Trigger: CCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAG...CCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGACAGTGGCAGTGGCTaGGGCAGCGGGAGCACTGGG +
Preference number: 2 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTDSGSG*GSGSTG
Trigger: CCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTC...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR TCA 90 bp GCCAGGTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: ARFLWPLRSPAEGIRVGGDLLLH*HLAFQG
Trigger: GCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATC...CCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCCCTCCTGACTGGGGGTaGTCAGGGCAGAGGCCATGG +
Preference number: 2 (lower is better)
Translates to: GEWPVARRQTSPEDFTGIPPDWG*SGQRPW
Trigger: CCATGGCCTCTGCCCTGACCACCCCCAGTCAGGAGG...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CAA 90 bp CCTGACTGGGGGTGGTCAGGGCAGAGGCCATGGGCACAGAGGGGGTaGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: PDWGWSGQRPWAQRG*GSFRHPTQTAVLPS
Trigger: ACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCATGGCCTCTGCCCTGACCACCCCCAGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR GCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGCTGAGCAAGACGCATaGCCAGGCAGACTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTAEQDA*PGRLPG
Trigger: CCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGC...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR GCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACATGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTCCCGG*ELRRGR
Trigger: CCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACA...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CCTCAGCAGGGCACAAGGAGTGGTGTGCTTGGTTGGGGTGCGGTGGAGGGTAGGGTCAGCTCCGCCTCCTaGAGACACACTTTGCGGAGC +
Preference number: 2 (lower is better)
Translates to: PQQGTRSGVLGWGAVEGRVSSAS*RHTLRS
Trigger: GCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGAC...CCTACCCTCCACCGCACCCCAACCAAGCACACCACTCCTTGTGCCCTGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTCCCAGGCAGACTCCCTaGGTGGTGATCACTGACCCC +
Preference number: 2 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTPRQTP*VVITDP
Trigger: GGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGG...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp GTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGGCATCCTCGTTGTCATGGCTaGCCCCAGACTCTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: VLVATAFTSRGDTGGWGHPRCHG*PQTLRG
Trigger: CCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGG...ATGCCCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp GTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGGCATGATACTGCCCGCAGCTaGTCCCAAGCCTTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: VLVATAFTSRGDTGGWGHDTARS*SQALGG
Trigger: ACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATC...ATGCCCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTCTGCCCCAACTGCCCTaGCGATGCGTGGCAGGGATT +
Preference number: 2 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTLPQLP*RCVAGI
Trigger: AATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAG...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGTGGTGGATTGGGGCTaGGTGCAGTGGCTCACGGCT +
Preference number: 2 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTVVDWG*VQWLTA
Trigger: AGCCGTGAGCCACTGCACCCAGCCCCAATCCACCAC...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR GCA 90 bp AACGAGCGCTCAGCTCCGGGGGATACAGGAAGTCCGCGTAGTATCTGCCAGAGAGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCG +
Preference number: 2 (lower is better)
Translates to: NERSAPGDTGSPRSICQRAAAAI*CCTDTS
Trigger: CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGC...TCTCTGGCAGATACTACGCGGACTTCCTGTATCCCCCGGAGCTGAGCGCTCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTGGGCACAGAGGGGGTTaGGCTCTTTCAGGCATCCCA +
Preference number: 2 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTGHRGG*ALSGIP
Trigger: TGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCC...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR GCA 90 bp CAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGCACAAGGAGTGGTGTaGTTGGTTGGGGTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: QRGQLCAPQIGIVPRPTRAQGVV*LVGVRW
Trigger: CCACCGCACCCCAACCAAGCACACCACTCCTTGTGC...CCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR GCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAGCCGGCGCTGCTCGGTaGTCAGATCAGGGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRAGAAR*SDQGPR
Trigger: CCTTGGCCCCTGATCTGAGCACCGAGCAGCGCCGGC...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp AAGCTAGCTGAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTGGAGGTGGTTTCCATaGGGTTCGCCGCTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: KLAEGPQSPAQCERRSRVWRWFP*GSPLRA
Trigger: AGCCCTGAGCGGCGAACCCCATGGAAACCACCTCCA...CACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTCAGCTAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: CQNWRTAPPLASGHLNERGDTGG*GHPQQR
Trigger: CCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCC...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCAAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCC +
Preference number: 2 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSSHSLA*ISSPSA
Trigger: GGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCT...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCAACTGGAGGCACTCCTaGGCAGCGAGCGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVNWRHS*AASVWG
Trigger: GCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTT...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCTGCCCTGGCGATGCGTaGCAGGGATTTCTGTTCACA +
Preference number: 2 (lower is better)
Translates to: GEWPVARRQTSPEDFTGICPGDA*QGFLFT
Trigger: TGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCA...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR TCA 90 bp CCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGCCCTAAATGGCCCTaGGACCCGATATGGTCCATT +
Preference number: 2 (lower is better)
Translates to: PQLPWRCVAGISVHTGVSCPKWP*DPIWSI
Trigger: AATGGACCATATCGGGTCTCAGGGCCATTTAGGGCA...GGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR GCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTGCTCCTCTAGCTCATaGAGCCTCCTCAGTGCATCT +
Preference number: 2 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTCSSSS*SLLSAS
Trigger: AGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCA...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR GCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCCCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGA +
Preference number: 2 (lower is better)
Translates to: CQNWRTAPPLASGHLNERPQNCC*GGCELR
Trigger: TCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGG...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp AAGCTAGCTGAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTTCCTCCCGGCACCCTaGCTTCAAGGCTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: KLAEGPQSPAQCERRSRVFLPAP*LQGSSS
Trigger: TGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA...CACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTCAGCTAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606812.5
3UTR-3UTR CCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCTGCATACACAGGTGGTaGGCCGGGGAGCATGGTGAG +
Preference number: 2 (lower is better)
Translates to: CQNWRTAPPLASGHLNERCIHRW*AGEHGE
Trigger: CTCACCATGCTCCCCGGCCCACCACCTGTGTATGCA...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCAGCTGCATACACAGGTaGTGGGCCGGGGAGCATGGT +
Preference number: 2 (lower is better)
Translates to: CQNWRTAPPLASGHLNERSCIHR*WAGEHG
Trigger: ACCATGCTCCCCGGCCCACCACCTGTGTATGCAGCT...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCC +
Preference number: 2 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLSHSLA*ISSPSA
Trigger: GGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCT...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGACAGTCCTTCCAAGTGTaGGCAGAGAGCCCACTGCCC +
Preference number: 2 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRQSFQV*AESPLP
Trigger: GGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTG...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR TCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCGAGGGAGCTGCTCTCTaGGTGCAGAACTACGTCCTC +
Preference number: 2 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVEGAAL*VQNYVL
Trigger: GAGGACGTAGTTCTGCACTCAGAGAGCAGCTCCCTC...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR GCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTGATATCTTCGCCATCTaGCTTACGAGACCCCTACCC +
Preference number: 2 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGDIFAI*LTRPLP
Trigger: GGGTAGGGGTCTCGTAAGGCAGATGGCGAAGATATC...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR GCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGATATCTTCGCCATCTaGCTTACGAGACCCCTACCC +
Preference number: 2 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPDIFAI*LTRPLP
Trigger: GGGTAGGGGTCTCGTAAGGCAGATGGCGAAGATATC...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
3UTR-3UTR GCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGAATTGCTGCTACCAGTaGCCAAGATCCCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRNCCYQ*PRSPPP
Trigger: TGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR GCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCACTCTGAGAGGGAGCTaGTCTCTGAGTGCAGAACTA +
Preference number: 2 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFTLRGS*SLSAEL
Trigger: TAGTTCTGCACTCAGAGAGCAGCTCCCTCTCAGAGT...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp AGAGGTGGAGGCAGGCACAGGACAGCACTTTCAGGCTCTGGGGCATGGAGAAAATTCCTCCCGGCACCCTaGCTTCAAGGCTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: RGGGRHRTALSGSGAWRKFLPAP*LQGSSS
Trigger: TGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA...TTTTCTCCATGCCCCAGAGCCTGAAAGTGCTGTCCTGTGCCTGCCTCCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGACCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRPQQRV*MHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGG...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR TCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCGTTGGAGGAAGACAGTaGATACCTAAGTCACAACTG +
Preference number: 2 (lower is better)
Translates to: GEWPVARRQTSPEDFTGIVGGRQ*IPKSQL
Trigger: CAGTTGTGACTTAGGTATTCACTGTCTTCCTCCAAC...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR GCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTAATGCAGGTCATGTaGAGTAGAGTGACCCTGTGC +
Preference number: 2 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRLMQVM*SRVTLC
Trigger: GCACAGGGTCACTCTACTGCACATGACCTGCATTAG...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR GCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCGAGCTGCTCTCTGAGTaGAGAACTACGTCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: CQNWRTAPPLASGHLNERELLSE*RTTSSW
Trigger: CCAAGAGGACGTAGTTCTGCACTCAGAGAGCAGCTC...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CCA 90 bp CATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATCCACCAGGACCCCATaGACTAATGCAGGTCATGTG +
Preference number: 2 (lower is better)
Translates to: HEMSLPPGTLASRLIFSLSTRTP*TNAGHV
Trigger: CACATGACCTGCATTAGTCCATGGGGTCCTGGTGGA...TAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCTCCACCAGGACCCCATaGACTAATGCAGGTCATGTG +
Preference number: 2 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVSTRTP*TNAGHV
Trigger: CACATGACCTGCATTAGTCCATGGGGTCCTGGTGGA...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
3UTR-3UTR TCA 90 bp AAGCTAGCTGAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGATGAACCCAACCAGATaGGATCACAGTTTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: KLAEGPQSPAQCERRSRVMNPTR*DHSFPF
Trigger: AAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCAT...CACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTCAGCTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR TCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCGCCTGGCCAATATGGTaGAACCTTGTCTCTACTAAG +
Preference number: 2 (lower is better)
Translates to: CQNWRTAPPLASGHLNERAWPIW*NLVSTK
Trigger: CTTAGTAGAGACAAGGTTTCACCATATTGGCCAGGC...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606812.5
3UTR-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAATCCCCTTCCAGTGTaGGTAATGTCTTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRNPLPV*VMSWVQ
Trigger: CTGGACCCAAGACATTACCCACACTGGAAGGGGATT...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CAA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTaGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCA +
Preference number: 2 (lower is better)
Translates to: FLPAPWLQGSSSAYN*IKNCCYQCPRSPPP
Trigger: TGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTATATGGTCCATTTTATaGAGGGGGTTCCTGAATGGA +
Preference number: 2 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPIWSIL*RGFLNG
Trigger: TCCATTCAGGAACCCCCTCCATAAAATGGACCATAT...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCCGGGTGCCCCTCCTGTaGGGCCTCCTGACTGGGGGT +
Preference number: 2 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVRVPLL*GLLTGG
Trigger: ACCCCCAGTCAGGAGGCCCCACAGGAGGGGCACCCG...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR GCA 90 bp GGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGAACTTGATAAAGAATTaGTGCTACCAGTGCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GSFRHPTQTAVLPSVGRENLIKN*CYQCPR
Trigger: TCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTT...CTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
3UTR-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCC +
Preference number: 2 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCSHSLA*ISSPSA
Trigger: GGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCT...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCACAGCTAGTTTCCTCATaGTCCAATTCATTAGCTATC +
Preference number: 2 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPQLVSS*SNSLAI
Trigger: GATAGCTAATGAATTGGACCATGAGGAAACTAGCTG...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
3UTR-3UTR GCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTGATATCTTCGCCATCTaGCTTACGAGACCCCTACCC +
Preference number: 2 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLADIFAI*LTRPLP
Trigger: GGGTAGGGGTCTCGTAAGGCAGATGGCGAAGATATC...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCAGCTAGTTTCCTCATaGTCCAATTCATTAGCTATC +
Preference number: 2 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLQLVSS*SNSLAI
Trigger: GATAGCTAATGAATTGGACCATGAGGAAACTAGCTG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR CCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCGGTGTGAGTGGTGAGTaGCCCGTGGCCCGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVGVSGE*PVARRQ
Trigger: CTGCCTACGGGCCACGGGCCACTCACCACTCACACC...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR TCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGATCATGTGCAGTAGAGTaGCCCTGTGCCATCACAGCA +
Preference number: 2 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGSCAVE*PCAITA
Trigger: TGCTGTGATGGCACAGGGTCACTCTACTGCACATGA...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACTAATGCAGGTCATGTaGAGTAGAGTGACCCTGTGC +
Preference number: 2 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGLMQVM*SRVTLC
Trigger: GCACAGGGTCACTCTACTGCACATGACCTGCATTAG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR-3UTR TCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCTATGGAGGGGGTTCCTaGATGGAACCTGGTTGGGCA +
Preference number: 2 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVYGGGS*MEPGWA
Trigger: TGCCCAACCAGGTTCCATTCAGGAACCCCCTCCATA...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CAA 90 bp GGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATCGGGTGTGGGGGTCCTaGGTGCGGAGGAGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: GREHRPALGPRSQSRVPDRVWGS*VRRRGL
Trigger: CAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCG...ATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp TGTGGCGGGCCCACGGAAGGGAGCACAGGCCGGCGCTaGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTAC +
Preference number: 3 (lower is better)
Translates to: CGGPTEGSTGRR*GPAASPEFRMY
Trigger: GTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGCCCGCCACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR TCA 72 bp CAGGCGGCGGGCGGCCGCCGCGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGCCTCAAGAGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: QAAGGRRDLLLH*HLAFQGLKSQL
Trigger: GAGCTGGCTCTTGAGGCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGCCCGCCGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 72 bp CAGCGGCCCGGTCCACCAGCAGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTACGAAGAGGGAGGCGC +
Preference number: 3 (lower is better)
Translates to: QRPGPPAGPQNC*CGGCELRRGRR
Trigger: GCGCCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGGACCGGGCCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp GTGGTGATCACTGACCCCGTGGACAGTGGCAGTGGCTaGGGCAGCGGGAGCACTGGGAGGCCAAGGCGGGCC +
Preference number: 3 (lower is better)
Translates to: VVITDPVDSGSG*GSGSTGRPRRA
Trigger: GGCCCGCCTTGGCCTCCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACGGGGTCAGTGATCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp GGCAGGCCACAGGGCTTAGTGCGGGTGGCACGGGTGTaGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: GRPQGLVRVARV*GSLVRRRGLLL
Trigger: CAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTAAGCCCTGTGGCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CAA 90 bp TGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTGAGCTGGTCCCAAGCCTaGGGTGGTGAGGGGCGCTCG +
Preference number: 3 (lower is better)
Translates to: WHGCGGPWCGGGGCCCQLSWSQA*GGEGRS
Trigger: CGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCT...CAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 72 bp CGGGTGGGTGGGGGCATCCACAGCAGAGGGTTTGGATaGACCTCAGGGCCTTCGGCAGCCTCTGGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: RVGGGIHSRGFG*TSGPSAASGGR
Trigger: CCTGCCCCCAGAGGCTGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGATGCCCCCACCCACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 72 bp CCCGCAGCCCCTCCAGAGCCAGGTTCTTGTGGCCACTaGGTTCACCAGCCGAGGGGATACGGGTGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: PAAPPEPGSCGH*VHQPRGYGWVG
Trigger: CCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR TCA 72 bp ACGCATGCCCAGGCAGACTCCCTGGGTGGTGATCACTaGCCCCGTGGACAGTGGCAGTGGCTGGGGCAGCGG +
Preference number: 3 (lower is better)
Translates to: THAQADSLGGDH*PRGQWQWLGQR
Trigger: CCGCTGCCCCAGCCACTGCCACTGTCCACGGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGGCATGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 72 bp CCACCAGCAGGGCCTCAGAACTGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGGCGCGATCGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: PPAGPQNCCCGG*ELRRGRRDRRQ
Trigger: CTGCCTCCGATCGCGCCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp GATACGGGTGGGTGGGGGCATCCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTCGGCAGCCTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: DTGGWGHPQQRV*MHLRAFGSLWG
Trigger: CCCCCAGAGGCTGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGATGCCCCCACCCACCCGTATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp GAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTaGGGCCTCCTGACTGGGGGTGGTCAGGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: EDFTGIYRVPLL*GLLTGGGQGRG
Trigger: GCCTCTGCCCTGACCACCCCCAGTCAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR GCA 72 bp GTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTaGATACACAGGTGGTGGGCCGGGGAGCATGGTGAG +
Preference number: 3 (lower is better)
Translates to: VLGAEEGAVAVS*IHRWWAGEHGE
Trigger: CTCACCATGCTCCCCGGCCCACCACCTGTGTATGCAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp TACCAGTCCCGCAGCCCCTCCAGAGCCAGGTTCTTGTaGCCACTGCGTTCACCAGCCGAGGGGATACGGGTG +
Preference number: 3 (lower is better)
Translates to: YQSRSPSRARFL*PLRSPAEGIRV
Trigger: CACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGGACTGGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR TCA 72 bp AGCTCCGCCTCCTGGAGACACACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCCTCCTGCAGGGTCCGC +
Preference number: 3 (lower is better)
Translates to: SSASWRHTLRSS*SFRLRASCRVR
Trigger: GCGGACCCTGCAGGAGGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp CAGAGAGCCCACTGCCCCAACTGCCCTGGCGATGCGTaGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: QRAHCPNCPGDA*QGFLFTPESPG
Trigger: GCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 72 bp TCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTaGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGA +
Preference number: 3 (lower is better)
Translates to: SGIPPRLQSFQV*AESPLPQLPWR
Trigger: TCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CAA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTAGGAGAAGGCAGGGGTaGGTTGGGGGCGCTCATACA +
Preference number: 3 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTRRRQG*VGGAHT
Trigger: TGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCCT...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 72 bp GCTGGCCAGTCAGCTCCGCCTCCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCAGGCTCAGGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: AGQSAPPPGDTL*GAPEVSGSGPP
Trigger: AGGAGGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGACTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 72 bp GACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTaGCCCAACTGCCCTGGCGATGCGTGGCAGGGATTT +
Preference number: 3 (lower is better)
Translates to: DCSPSKCGQRAH*PNCPGDAWQGF
Trigger: AAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR GCA 72 bp GAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTaGAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGC +
Preference number: 3 (lower is better)
Translates to: EGVGLFQASHPD*SPSKCGQRAHC
Trigger: GCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CAA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACATCCACAGCAGAGGGTTaGGATGCACCTCAGGGCCTT +
Preference number: 3 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTSTAEG*DAPQGL
Trigger: AAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGA...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR TCA 72 bp CCTTGGAAGATTAGGTTGGCGCACTCTGCTCAGGACTaGGAGCAACCACACCCCAGGGCCCAGCGAGGTCAG +
Preference number: 3 (lower is better)
Translates to: PWKIRLAHSAQD*EQPHPRAQRGQ
Trigger: CTGACCTCGCTGGGCCCTGGGGTGTGGTTGCTCTCAGTCCTGAGCAGAGTGCGCCAACCTAATCTTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
3UTR CCA 72 bp GGTGGAAGGAAAGCCAAGGAAGGTGTGAGTGGTGAGTaGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: GGRKAKEGVSGE*PVARRQTSPED
Trigger: ATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACCACTCACACCTTCCTTGGCTTTCCTTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CAA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCCCATGGGGCTCCTCGTaGTCATGGCTGGCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVPWGSS*SWLAPD
Trigger: GTCTGGGGCCAGCCATGACAACGAGGAGCCCCATGG...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CCA 72 bp CAGGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTaGAATCGTGCCCAGGCCAACAAGGGACATATCAGA +
Preference number: 3 (lower is better)
Translates to: QGPARSAVCSPD*NRAQANKGHIR
Trigger: TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CAA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCGAAGGCAGGGGTTGGTaGGGGGCGCTCATACAGCAC +
Preference number: 3 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVEGRGW*GALIQH
Trigger: GTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTTC...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR-3UTR CAA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGCAGAACTACGTCCTCTaGGCTGAGCTGAGCAAGACG +
Preference number: 3 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGQNYVL*AELSKT
Trigger: CGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTTCTG...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR TCA 72 bp AGAGTTCCGCCGGCTCTTCAGATCCCCATAAAGATCTaGTGGAGGTGGTTTCCATGGGGTTCGCCGCTCAGG +
Preference number: 3 (lower is better)
Translates to: RVPPALQIPIKI*WRWFPWGSPLR
Trigger: CCTGAGCGGCGAACCCCATGGAAACCACCTCCATCAGATCTTTATGGGGATCTGAAGAGCCGGCGGAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR GCA 72 bp AGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTaGCCAGGCCAACAAGGGACATATCAGAAGGGGTCA +
Preference number: 3 (lower is better)
Translates to: SEVSCVLPRLES*PGQQGTYQKGS
Trigger: TGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
3UTR-3UTR CAA 90 bp CCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCGTAAAACGCCTAGTGTaGGAGGAAGACAGTGAATAC +
Preference number: 3 (lower is better)
Translates to: PQLPWRCVAGISVHTGVSVKRLV*EEDSEY
Trigger: GTATTCACTGTCTTCCTCCAACACTAGGCGTTTTAC...GGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR TCA 72 bp TTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTaGGACCCGATATGGTCCATTTTATGGAGGGGGTTC +
Preference number: 3 (lower is better)
Translates to: FTPESPGCPKWP*DPIWSILWRGF
Trigger: GAACCCCCTCCATAAAATGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 72 bp GCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTaGCTTCAAGGCTCATCTTCAGCCTATAACTTGATA +
Preference number: 3 (lower is better)
Translates to: ARGMRCPFLPAP*LQGSSSAYNLI
Trigger: TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
3UTR CCA 72 bp CCCGATATGGTCCATTTTATGGAGGGGGTTCCTGAATaGAACCTGGTTGGGCATGGGAACAGGAATGAACCC +
Preference number: 3 (lower is better)
Translates to: PDMVHFMEGVPE*NLVGHGNRNEP
Trigger: GGGTTCATTCCTGTTCCCATGCCCAACCAGGTTCCATTCAGGAACCCCCTCCATAAAATGGACCATATCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR-3UTR CAA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCGTAAAACGCCTAGTGTaGGAGGAAGACAGTGAATAC +
Preference number: 3 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVVKRLV*EEDSEY
Trigger: GTATTCACTGTCTTCCTCCAACACTAGGCGTTTTAC...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
3UTR CCA 72 bp TGGTCCATTTTATGGAGGGGGTTCCTGAATGGAACCTaGTTGGGCATGGGAACAGGAATGAACCCAACCAGA +
Preference number: 3 (lower is better)
Translates to: WSILWRGFLNGT*LGMGTGMNPTR
Trigger: TCTGGTTGGGTTCATTCCTGTTCCCATGCCCAACCAGGTTCCATTCAGGAACCCCCTCCATAAAATGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 72 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCCTTACGAGACCCCTAC +
Preference number: 3 (lower is better)
Translates to: NSLAIMTSHSLA*ISSPSALRDPY
Trigger: GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR GCA 72 bp CAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTaGTGCTACCAGTGCCCAAGATCCCCTCCACCAGGA +
Preference number: 3 (lower is better)
Translates to: QGSSSAYNLIKN*CYQCPRSPPPG
Trigger: TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR CCA 72 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATaGTCCAATTCATTAGCTATCATGACTAGCCACTCC +
Preference number: 3 (lower is better)
Translates to: SDPVPSQQLVSS*SNSLAIMTSHS
Trigger: GGAGTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
3UTR TCA 72 bp TGGTTGGGCATGGGAACAGGAATGAACCCAACCAGATaGGATCACAGTTTCCCTTTTGTAAAACGCCTAGTG +
Preference number: 3 (lower is better)
Translates to: WLGMGTGMNPTR*DHSFPFVKRLV
Trigger: CACTAGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTTCCCATGCCCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
3UTR CCA 72 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTaGGTAATGTCTTGGGTCCAGATCCACTGGTATAAA +
Preference number: 3 (lower is better)
Translates to: SLHIYYTNPLPV*VMSWVQIHWYK
Trigger: TTTATACCAGTGGATCTGGACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GCCCACGGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTTGGGGCTGGTGGGGCTaGCCACAGAGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AHGREHRPALGPRSQSRVWGWWG*PQSSAG
Trigger: GCCGGCGGAACTCTGTGGCCAGCCCCACCAGCCCCA...AACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp CCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACTGACGAGAATGGCCGGGGAGCATGGTaGGGAGCCCATCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: PPGGSPSGSPGCRTTDENGRGAW*GAHPGG
Trigger: CCCGCCGGGATGGGCTCCTCACCATGCTCCCCGGCC...ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CGCGATCGGAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGCCGGCGGACCAACTaGGGCCGTTCACCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RDRRQGPPGGSPSGSPGCRRRTN*GRSPGS
Trigger: AGAGCCTGGTGAACGGCCCCAGTTGGTCCGCCGGCG...GCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTCCGATCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: GREHRPALGPRSQSRVPDASVWG*WGWPQS
Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...ATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp ACAGGGGGCGCCGTGAAACTCCTCGAGTGTGGGAGTGGCGCCTGGCTGGGGGCCCGGGTGGCACGGGTGTaGGGGTCCTTGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TGGAVKLLECGSGAWLGARVARV*GSLVRR
Trigger: CCTCCGCACCAAGGACCCCCACACCCGTGCCACCCG...GGCCCCCAGCCAGGCGCCACTCCCACACTCGAGGAGTTTCACGGCGCCCCCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp GCCCACGGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTAGACAGGGGGCGCCGTaGAACTCCTCGAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: AHGREHRPALGPRSQSRVRQGAP*NSSSVG
Trigger: TCCCACACTCGAGGAGTTTCACGGCGCCCCCTGTCT...AACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp CACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTACCAGTCGCCGGCGCTGCTCGGTaGTCAGATCAGGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HRPALGPRSQSRVPDVPVAGAAR*SDQGPR
Trigger: CCTTGGCCCCTGATCTGAGCACCGAGCAGCGCCGGC...GACTGGTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATTTGGTTGGGGTGCGGTaGAGGGTAGGCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GREHRPALGPRSQSRVPDLVGVR*RVGAGC
Trigger: ACAGCCCGCGCCTACCCTCCACCGCACCCCAACCAA...ATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACAGCGTGTGGGGCTGGTaGGGCTGGCCACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: EAGSARGKPIWESWLPDHSVWGW*GWPQSS
Trigger: GGAACTCTGTGGCCAGCCCCACCAGCCCCACACGCT...GTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
3UTR CAA 72 bp CCAGCGGCCCGGTCCACCAGCAGGGCCTCAGAACTGTaGCTGCGGCGGGTGCGAGCTACGAAGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PAARSTSRASEL*LRRVRATKREA
Trigger: CGCCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGGACCGGGCCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACAGTCCGCGTAGTATCTaGCAGAGACAGGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: EAGSARGKPIWESWLPDHSPRSI*QRQGAP
Trigger: CGGCGCCCCCTGTCTCTGGCAGATACTACGCGGACT...GTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACTGACGAGAATCTCAGTGCATCTGCCTaGACCTGGCGCCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PPGGSPSGSPGCRTTDENLSASA*TWRRRR
Trigger: CCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAG...ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp GAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACGGCCGGGGAGCATGGTaGGGAGCCCATCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: EPTAPTALAMRGRDFCSHGRGAW*GAHPGG
Trigger: CCCGCCGGGATGGGCTCCTCACCATGCTCCCCGGCC...GTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGGGAGCATGGTGAGGAGCCCATCCCGGCGGGAGAGGGGTCCTGGGACCTCAGCTGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GEHGEEPIPAGEGSWDLSCCCGG*ELRRGR
Trigger: CCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACA...GCTGAGGTCCCAGGACCCCTCTCCCGCCGGGATGGGCTCCTCACCATGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTCAGCTCCGCCTCCTaGAGACACACTTTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GREHRPALGPRSQSRVPDVSSAS*RHTLRS
Trigger: GCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGAC...ATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATTGCATACACAGGTGGTaGGCCGGGGAGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: GREHRPALGPRSQSRVPDCIHRW*AGEHGE
Trigger: CTCACCATGCTCCCCGGCCCACCACCTGTGTATGCA...ATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACTGACGAGAATGAGGAAGGGTGGGTGTaGCGGGCCCACGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PPGGSPSGSPGCRTTDENEEGWV*RAHGRE
Trigger: CTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTC...ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp ACAGGGGGCGCCGTGAAACTCCTCGAGTGTGGGAGTGGCGCCTGGCTGGGGGCCGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TGGAVKLLECGSGAWLGADLLLH*HLAFQG
Trigger: GCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATC...GGCCCCCAGCCAGGCGCCACTCCCACACTCGAGGAGTTTCACGGCGCCCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp CACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTACCAGTCTCCTCTTGGCTGAGCTaGGCAAGACGCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HRPALGPRSQSRVPDVPVSSWLS*ARRMPR
Trigger: CCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGA...GACTGGTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp CGCGATCGGAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCTACGTCCTCTTGGCTaGGCTGAGCAAGACGCATGC +
Preference number: 4 (lower is better)
Translates to: RDRRQGPPGGSPSGSPGCLRPLG*AEQDAC
Trigger: GCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAG...GCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTCCGATCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CGCGATCGGAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RDRRQGPPGGSPSGSPGCPQQRV*MHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGG...GCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTCCGATCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAGGAGTGGCGCCTGGCTaGGGGCCCCGTACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: HPTQTAVLPSVGREPTAPGVAPG*GPRTAP
Trigger: AGGCGCTGTACGGGGCCCCCAGCCAGGCGCCACTCC...TGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACCAAGCCTTGGGTGGTaGGGGGCGCTCGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQPSLGW*GALGQR
Trigger: TCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGG...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACTCCTGCAGGGTCCGCTaGCGGTCAAGCAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: EPTAPTALAMRGRDFCSHSCRVR*RSSSPR
Trigger: GCGGGGGCTGCTTGACCGGCAGCGGACCCTGCAGGA...GTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAAAGGCTCAGGGCCTCCTaGAGGGTCCGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQRLRAS*RVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCT...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CAGGCCACAGGGCTTAGTGCGGGTGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGCACAAGGAGTGGTGTaGTTGGTTGGGGTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QATGLSAGGTGVGVLGAEAQGVV*LVGVRW
Trigger: CCACCGCACCCCAACCAAGCACACCACTCCTTGTGC...CTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTAAGCCCTGTGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCCTGTTCCACCGCCACTaGGGGGCAGGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTLFHRH*GAGPGP
Trigger: TGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAG...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp ACAGGGGGCGCCGTGAAACTCCTCGAGTGTGGGAGTGGCGCCTGGCTGGGGGCCGGAGGAGGGGGCTGTTaGTGTCAGCTGCATACACAG +
Preference number: 4 (lower is better)
Translates to: TGGAVKLLECGSGAWLGAGGGGC*CQLHTQ
Trigger: CTGTGTATGCAGCTGACAGCAACAGCCCCCTCCTCC...GGCCCCCAGCCAGGCGCCACTCCCACACTCGAGGAGTTTCACGGCGCCCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GGGGAGCATGGTGAGGAGCCCATCCCGGCGGGAGAGGGGTCCTGGGACCTCAGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GEHGEEPIPAGEGSWDLSLLRGP*VTATSL
Trigger: AAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAG...GCTGAGGTCCCAGGACCCCTCTCCCGCCGGGATGGGCTCCTCACCATGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CAGGCCACAGGGCTTAGTGCGGGTGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGGACCCACTTGGCCCTaGTACCTTGGTTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: QATGLSAGGTGVGVLGAEGPTWP*YLGSLR
Trigger: GCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCC...CTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTAAGCCCTGTGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTCCGGATGTACCAGTCGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: HRPALGPRSQSRVPDVPVAVERP*LMAGQS
Trigger: ACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGC...GACTGGTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTCTCAGTGCATCTGCCTaGACCTGGCGCCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTLSASA*TWRRRR
Trigger: CCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAG...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGGCTGGTCCCAAGCCTTaGGTGGTGAGGGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKAGPKP*VVRGAR
Trigger: CCGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGC...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAAGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQASVWG*WGWPQS
Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCCGGGTGCCCCTCCTGTaGGGCCTCCTGACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PQLPWRCVAGISVHTGVSRVPLL*GLLTGG
Trigger: ACCCCCAGTCAGGAGGCCCCACAGGAGGGGCACCCG...GGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCCCAAGCCTTGGGTGGTaGGGGGCGCTCGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTAPSLGW*GALGQR
Trigger: TCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGG...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACCGAACAGGGCAGCTTTaGCTTCCATCTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EAGSARGKPIWESWLPDHRTGQL*LPSWCC
Trigger: ACAGCACCAAGATGGAAGTCAAAGCTGCCCTGTTCG...GTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp TGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTGGCCGCGATCTGCTGTTaGACTGACACCTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: WHGCGGPWCGGGGCCCQLAAICC*TDTSRS
Trigger: GGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGC...CAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCGCCGGCGCTGCTCGGTaGTCAGATCAGGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTAGAAR*SDQGPR
Trigger: CCTTGGCCCCTGATCTGAGCACCGAGCAGCGCCGGC...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CAGGCCACAGGGCTTAGTGCGGGTGGCACGGGTGTGGGGGTCCTTGGTGCGGAGCGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: QATGLSAGGTGVGVLGAERTSLS*SSSSCS
Trigger: GCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCG...CTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTAAGCCCTGTGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GCCAGGTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: ARFLWPLRSPAEGIRVGGGPQNC*CGGCEL
Trigger: TAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCC...CCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACCTGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp CAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGCTGTTCCACCGCCACTaGGGGGCAGGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: QRGQLCAPQIGIVPRPTRLFHRH*GAGPGP
Trigger: TGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAG...CCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCCTGGCATCTACCGGGTaGCCCTCCTGTGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GEWPVARRQTSPEDFTGILASTG*PSCGAS
Trigger: GGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAG...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGGGAGCATGGTGAGGAGCCCATCCCGGCGGGAGAGGGGTCCTGGGACCTCAGCATGTCTGGACCCACTTaGCCCTGGTACCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GEHGEEPIPAGEGSWDLSMSGPT*PWYLGS
Trigger: GGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACAT...GCTGAGGTCCCAGGACCCCTCTCCCGCCGGGATGGGCTCCTCACCATGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGGTCTCGACCAGGCCCTaGCTCCGGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKVSTRP*LRLVVA
Trigger: TGCCACTACCAGCCGGAGCCAGGGCCTGGTCGAGAC...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGACACTCAGGGGGCAGCTaGCCAGTCAGCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPQLPWRCVAGISVHTGHSGGS*PVSSAS
Trigger: GGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAGTG...TCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCACTCAGTGCATCTGCCTaGACCTGGCGCCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSLSASA*TWRRRR
Trigger: CCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAG...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACTCAGTGCATCTGCCTaGACCTGGCGCCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ARSAVCSPDWNRAQANKGLSASA*TWRRRR
Trigger: CCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAG...TCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AGAGGCCATGGGCACAGAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGGACAGTGGCAGTGGCTaGGGCAGCGGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: RGHGHRGGWALSGIPPRLDSGSG*GSGSTG
Trigger: CCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTC...CAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCATGGCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCGACAGTGGCAGTGGCTaGGGCAGCGGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTADSGSG*GSGSTG
Trigger: CCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTC...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATGGGCAGCGAGCGTGTaGGGCTGGTGGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSWAASV*GWWGWP
Trigger: TGGCCAGCCCCACCAGCCCCACACGCTCGCTGCCCA...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCTCAGGTTTGCAGAGCTaGGGGCCAGCGCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GEWPVARRQTSPEDFTGISGLQS*GPAPRV
Trigger: CACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGA...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTCAGGTTTGCAGAGCTaGGGGCCAGCGCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PQLPWRCVAGISVHTGVSSGLQS*GPAPRV
Trigger: CACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGA...GGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTGGGAGAAGGCAGGGGTTaGTTGGGGGCGCTCATACAG +
Preference number: 4 (lower is better)
Translates to: WHGCGGPWCGGGGCCCQLGEGRG*LGALIQ
Trigger: CTGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCC...CAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTGGGTGTGGGGGTCCTTaGTGCGGAGGAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTGCGGP*CGGGGC
Trigger: ACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCC...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACGGGTGGCACGGGTGTaGGGGTCCTTGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ARSAVCSPDWNRAQANKGRVARV*GSLVRR
Trigger: CCTCCGCACCAAGGACCCCCACACCCGTGCCACCCG...TCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGCCGAGGGGATACGGGTaGGTGGGGGCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKPRGYG*VGASTA
Trigger: TGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGG...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTGAGGAAGGGTGGGTGTaGCGGGCCCACGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTEEGWV*RAHGRE
Trigger: CTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTC...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGGCCAGTCAGCTCCGCCTCCTGGAGACACACTTTGCGGAGCTCCTGAAGTTTGGAGTGGCGCCTGGCTaGGGGCCCCGTACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LASQLRLLETHFAELLKFGVAPG*GPRTAP
Trigger: AGGCGCTGTACGGGGCCCCCAGCCAGGCGCCACTCC...AAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGACTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp CTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCGGAGTGGCGCCTGGCTaGGGGCCCCGTACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LFQASHPDCSPSKCGQRAGVAPG*GPRTAP
Trigger: AGGCGCTGTACGGGGCCCCCAGCCAGGCGCCACTCC...GGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCTCGGCGCCCTGCCCGTaGGCCGTGTTCGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVSAPCP*AVFGCA
Trigger: AGCGCAGCCGAACACGGCCCACGGGCAGGGCGCCGA...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597275.5
3UTR CAA 72 bp GGGTGGTCAGGGCAGAGGCCATGGGCACAGAGGGGGTaGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GWSGQRPWAQRG*GSFRHPTQTAV
Trigger: GACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCATGGCCTCTGCCCTGACCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACCCAAGCCTTGGGTGGTaGGGGGCGCTCGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDPSLGW*GALGQR
Trigger: TCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGG...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTGGCCGGGGAGCATGGTaGGGAGCCCATCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTGRGAW*GAHPGG
Trigger: CCCGCCGGGATGGGCTCCTCACCATGCTCCCCGGCC...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGTCCTGCAGGGTCCGCTaGCGGTCAAGCAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGSCRVR*RSSSPR
Trigger: GCGGGGGCTGCTTGACCGGCAGCGGACCCTGCAGGA...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAAGGCTCAGGGCCTCCTaGAGGGTCCGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQRLRAS*RVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCT...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCAGGCTCAGGGCCTCCTaGAGGGTCCGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFRLRAS*RVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCT...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGCCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: GQRAHCPNCPGDAWQGFLPQNCC*GGCELR
Trigger: TCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGG...CAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTGTTCCACCGCCACTaGGGGGCAGGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRLFHRH*GAGPGP
Trigger: TGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAG...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCTGTTCCACCGCCACTaGGGGGCAGGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFQASHPDCSPSKCGQRALFHRH*GAGPGP
Trigger: TGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAG...GGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACTGACGAGAATAGCAGAGGGTTTGGATaGACCTCAGGGCCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: PPGGSPSGSPGCRTTDENSRGFG*TSGPSA
Trigger: TGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCT...ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGCCCACTGCCCCAACTaGCCTGGCGATGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQAHCPN*PGDAWQ
Trigger: CTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACACTCAGGGGGCAGCTaGCCAGTCAGCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARSAVCSPDWNRAQANKGHSGGS*PVSSAS
Trigger: GGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAGTG...TCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGCTAGCTGAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGCGCCGGCGGACCAACTaGGGCCGTTCACCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KLAEGPQSPAQCERRSRVRRRTN*GRSPGS
Trigger: AGAGCCTGGTGAACGGCCCCAGTTGGTCCGCCGGCG...CACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTCAGCTAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACCGTGGACAGTGGCAGTaGCTGGGGCAGCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDRGQWQ*LGQREH
Trigger: GTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACG...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCACGTGGACAGTGGCAGTaGCTGGGGCAGCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSRGQWQ*LGQREH
Trigger: GTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACG...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGCCCAGGCAGACTCCCTaGGTGGTGATCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKPRQTP*VVITDP
Trigger: GGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGG...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGGATACTGCCCGCAGCTaGTCCCAAGCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GQRAHCPNCPGDAWQGFLDTARS*SQALGG
Trigger: ACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATC...CAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTTGGGGCTGGTGGGGCTaGCCACAGAGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGWGWWG*PQSSAG
Trigger: GCCGGCGGAACTCTGTGGCCAGCCCCACCAGCCCCA...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQASVWG*WGWPQS
Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGTGGGCAGCGAGCGTGTaGGGCTGGTGGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGWAASV*GWWGWP
Trigger: TGGCCAGCCCCACCAGCCCCACACGCTCGCTGCCCA...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCTCAGGTTTGCAGAGCTaGGGGCCAGCGCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFSGLQS*GPAPRV
Trigger: CACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGA...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCAGTCCCGCAGCCCCTCCAGAGCCAGGTTCTTGTGGCCACTGCGTTCACCAGCAGCTGCATACACAGGTaGTGGGCCGGGGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: PVPQPLQSQVLVATAFTSSCIHR*WAGEHG
Trigger: ACCATGCTCCCCGGCCCACCACCTGTGTATGCAGCT...GCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCGGGTGGCACGGGTGTaGGGGTCCTTGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSFRHPTQTAVLPSVGRERVARV*GSLVRR
Trigger: CCTCCGCACCAAGGACCCCCACACCCGTGCCACCCG...CTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGCCTTCGGCAGCCTCTaGGGGCAGGCCACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQAFGSL*GQATGL
Trigger: AAGCCCTGTGGCCTGCCCCCAGAGGCTGCCGAAGGC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGCTAGCTGAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGGCCTTCGGCAGCCTCTaGGGGCAGGCCACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KLAEGPQSPAQCERRSRVAFGSL*GQATGL
Trigger: AAGCCCTGTGGCCTGCCCCCAGAGGCTGCCGAAGGC...CACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTCAGCTAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTGDTGG*GHPQQR
Trigger: CCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCC...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CGCAGCCCCTCCAGAGCCAGGTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGAGAGCCAGGTTCTTGTaGCCACTGCGTTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RSPSRARFLWPLRSPAEGRARFL*PLRSPA
Trigger: GGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCT...CCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAATGTCAGACACCTTCCTaGGCCTACGGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQCQTPS*AYGEPG
Trigger: CCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACA...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCTCAGGGCAGAGGCCATaGGCACAGAGGGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTASGQRP*AQRGLG
Trigger: GCCCAACCCCCTCTGTGCCCATGGCCTCTGCCCTGA...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCGGGTGCCCCTCCTGTaGGGCCTCCTGACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRRVPLL*GLLTGG
Trigger: ACCCCCAGTCAGGAGGCCCCACAGGAGGGGCACCCG...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp CCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTGGTGAGTGGCCCGTaGCCCGTAGGCAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: PLPQLPWRCVAGISVHTGVVSGP*PVGRPH
Trigger: GTGAGGTCTGCCTACGGGCCACGGGCCACTCACCAC...TCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACCTGAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTGGGGCCTCCTGGTGGTGAGTGGCCCGTaGCCCGTAGGCAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: SPEDFTGIYRVPLLWGLLVVSGP*PVGRPH
Trigger: GTGAGGTCTGCCTACGGGCCACGGGCCACTCACCAC...CAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTCAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp CGCGATCGGAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCATCCCCATAAAGATCTaGTGGAGGTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: RDRRQGPPGGSPSGSPGCIPIKI*WRWFPW
Trigger: CCATGGAAACCACCTCCATCAGATCTTTATGGGGAT...GCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTCCGATCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCAGACAGGGGGCGCCGTaGAACTCCTCGAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GEWPVARRQTSPEDFTGIRQGAP*NSSSVG
Trigger: TCCCACACTCGAGGAGTTTCACGGCGCCCCCTGTCT...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGGCAGAGGTTGCAGTaGGCTGAGATTGCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANRQRLQ*AEIAPL
Trigger: CAGCGGCGCAATCTCAGCTCACTGCAACCTCTGCCT...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: QRGQLCAPQIGIVPRPTRAAAAI*CCTDTS
Trigger: CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGC...CCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCAGCAGGGCACAAGGAGTGGTGTGCTTGGTTGGGGTGCGGTGGAGGGTAGGATGCAGCCTCCTCAGTaGATCTGCCTGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: PQQGTRSGVLGWGAVEGRMQPPQ*ICLDLA
Trigger: CGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCAT...CCTACCCTCCACCGCACCCCAACCAAGCACACCACTCCTTGTGCCCTGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACATGCAGCCTCCTCAGTaGATCTGCCTGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANMQPPQ*ICLDLA
Trigger: CGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCAT...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATGCAGCCTCCTCAGTaGATCTGCCTGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKMQPPQ*ICLDLA
Trigger: CGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCAT...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CAGGCCACAGGGCTTAGTGCGGGTGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGCTGCTCTCTGAGTaGAGAACTACGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QATGLSAGGTGVGVLGAEELLSE*RTTSSW
Trigger: CCAAGAGGACGTAGTTCTGCACTCAGAGAGCAGCTC...CTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTAAGCCCTGTGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp CCTCAGCAGGGCACAAGGAGTGGTGTGCTTGGTTGGGGTGCGGTGGAGGGTAGGCCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: PQQGTRSGVLGWGAVEGRPQNCC*GGCELR
Trigger: TCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGG...CCTACCCTCCACCGCACCCCAACCAAGCACACCACTCCTTGTGCCCTGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTGPQNC*CGGCEL
Trigger: TAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCC...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCTGTTCCACCGCCACTaGGGGGCAGGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLLFHRH*GAGPGP
Trigger: TGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTTCCACCGCCACTaGGGGGCAGGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTLFHRH*GAGPGP
Trigger: TGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAG...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGGCATGGTTCTTGTGGCCACTaGGTTCACCAGCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VLVATAFTSRGDTGGWGHGSCGH*VHQPRG
Trigger: TCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACC...ATGCCCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAAGGTTCTTGTGGCCACTaGGTTCACCAGCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQGSCGH*VHQPRG
Trigger: TCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACC...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp TGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTGGCGAGGTCAGCTGTGTaGTCCCCAGATTGGAATCGT +
Preference number: 4 (lower is better)
Translates to: WHGCGGPWCGGGGCCCQLARSAV*SPDWNR
Trigger: ACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC...CAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp GAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGCCCACTGCCCCAACTaGCCTGGCGATGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EGVGLFQASHPDCSPSKCAHCPN*PGDAWQ
Trigger: CTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGC...ACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTCTGGCATCTACCGGGTaGCCCTCCTGTGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EGVGLFQASHPDCSPSKCLASTG*PSCGAS
Trigger: GGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAG...ACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGTGGTGTGCTTGGTTaGGGTGCGGTGGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANSGVLG*GAVEGR
Trigger: CCTACCCTCCACCGCACCCCAACCAAGCACACCACT...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTCAGTGCATCTGCCTaGACCTGGCGCCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTLSASA*TWRRRR
Trigger: CCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAG...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCGTGGACAGTGGCAGTaGCTGGGGCAGCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGRGQWQ*LGQREH
Trigger: GTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACG...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCCCAGGCAGACTCCCTaGGTGGTGATCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: EPTAPTALAMRGRDFCSHPRQTP*VVITDP
Trigger: GGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGG...GTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGGCTGGTCCCAAGCCTTaGGTGGTGAGGGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: GSFRHPTQTAVLPSVGREAGPKP*VVRGAR
Trigger: CCGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGC...CTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGGGGCTGGTGGGGCTaGCCACAGAGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLWGWWG*PQSSAG
Trigger: GCCGGCGGAACTCTGTGGCCAGCCCCACCAGCCCCA...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: KGHEMSLPPGTLASRLIFASVWG*WGWPQS
Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...GAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAAACTGGAGGCACTCCTaGGCAGCGAGCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQNWRHS*AASVWG
Trigger: GCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTT...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTTCAGGTTTGCAGAGCTaGGGGCCAGCGCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGSGLQS*GPAPRV
Trigger: CACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGA...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGCTGCATACACAGGTaGTGGGCCGGGGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANSCIHR*WAGEHG
Trigger: ACCATGCTCCCCGGCCCACCACCTGTGTATGCAGCT...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCGCCTTCGGCAGCCTCTaGGGGCAGGCCACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVAFGSL*GQATGL
Trigger: AAGCCCTGTGGCCTGCCCCCAGAGGCTGCCGAAGGC...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDGDTGG*GHPQQR
Trigger: CCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCC...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGAGAGCCAGGTTCTTGTaGCCACTGCGTTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GQRAHCPNCPGDAWQGFLRARFL*PLRSPA
Trigger: GGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCT...CAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGGAGTGGCGCCTGGCTaGGGGCCCCGTACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNGVAPG*GPRTAP
Trigger: AGGCGCTGTACGGGGCCCCCAGCCAGGCGCCACTCC...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGGAGTGGCGCCTGGCTaGGGGCCCCGTACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRGVAPG*GPRTAP
Trigger: AGGCGCTGTACGGGGCCCCCAGCCAGGCGCCACTCC...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGAGTGTCCCCGGGGTCTaGGTGTCAGAACTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKSVPGV*VSELED
Trigger: GTCCTCCAGTTCTGACACCCAGACCCCGGGGACACT...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGTGTCCCCGGGGTCTaGGTGTCAGAACTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANSVPGV*VSELED
Trigger: GTCCTCCAGTTCTGACACCCAGACCCCGGGGACACT...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGGCATGGGAGCCAGGGGCCTTaGAAGATTAGGTTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: VLVATAFTSRGDTGGWGHGSQGP*KIRLAH
Trigger: GTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCC...ATGCCCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp TCACCTGAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTGGGGCCTCCTGCTGCCCCAACTGCCCTaGCGATGCGTGGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: SPEDFTGIYRVPLLWGLLLPQLP*RCVAGI
Trigger: AATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAG...CAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTCAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAACCTCCTGACTGGGGGTaGTCAGGGCAGAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQPPDWG*SGQRPW
Trigger: CCATGGCCTCTGCCCTGACCACCCCCAGTCAGGAGG...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGCTAGCTGAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGCCTCCTGACTGGGGGTaGTCAGGGCAGAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KLAEGPQSPAQCERRSRVPPDWG*SGQRPW
Trigger: CCATGGCCTCTGCCCTGACCACCCCCAGTCAGGAGG...CACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTCAGCTAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGTGTGAGTGGTGAGTaGCCCGTGGCCCGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQGVSGE*PVARRQ
Trigger: CTGCCTACGGGCCACGGGCCACTCACCACTCACACC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACCTGAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTGGGGCCTCCTGGTGGTGGATTGGGGCTaGGTGCAGTGGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: SPEDFTGIYRVPLLWGLLVVDWG*VQWLTA
Trigger: AGCCGTGAGCCACTGCACCCAGCCCCAATCCACCAC...CAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTCAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGGCATACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLVATAFTSRGDTGGWGHTLRSS*SFRLRA
Trigger: GGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGT...ATGCCCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTCCTCTTGGCTGAGCTaGGCAAGACGCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTSSWLS*ARRMPR
Trigger: CCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGA...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTCACTCTGCTCAGGACTaGGAGCAACCACACCCCAGG +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTHSAQD*EQPHPR
Trigger: CCTGGGGTGTGGTTGCTCTCAGTCCTGAGCAGAGTG...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAAGCCAAGGAAGGTGTaGGTGGTGAGTGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTKPRKV*VVSGPW
Trigger: CCACGGGCCACTCACCACTCACACCTTCCTTGGCTT...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCAAGCCAAGGAAGGTGTaGGTGGTGAGTGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTKPRKV*VVSGPW
Trigger: CCACGGGCCACTCACCACTCACACCTTCCTTGGCTT...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACAGCTACTCGGGAGGGTaGGGCAGGAGAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDSYSGG*GRRTQE
Trigger: CTCCTGGGTTCTCCTGCCTCACCCTCCCGAGTAGCT...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: EGVGLFQASHPDCSPSKCAAAAI*CCTDTS
Trigger: CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGC...ACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGCCGGCGCTGCTCGGTaGTCAGATCAGGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLAGAAR*SDQGPR
Trigger: CCTTGGCCCCTGATCTGAGCACCGAGCAGCGCCGGC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACCGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANRTSLS*SSSSCS
Trigger: GCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCG...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGCTGAGCAAGACGCATaGCCAGGCAGACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQAEQDA*PGRLPG
Trigger: CCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACTCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAAT +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANSGSPG*RTTDEN
Trigger: ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGA...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp AGAGGCCATGGGCACAGAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGCCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: RGHGHRGGWALSGIPPRLPQNCC*GGCELR
Trigger: TCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGG...CAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCATGGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGGGAGGAGGGGGCTGTTaGTGTCAGCTGCATACACAG +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKGGGGC*CQLHTQ
Trigger: CTGTGTATGCAGCTGACAGCAACAGCCCCCTCCTCC...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGGGCAGAGAGCCCACTaGCCCAACTGCCCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGGQRAH*PNCPGD
Trigger: ATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCC...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAGGACCCACTTGGCCCTaGTACCTTGGTTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: HPTQTAVLPSVGREPTAPGPTWP*YLGSLR
Trigger: GCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCC...TGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CCA 90 bp CAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGCGCTCTGACTTCACCTaGGGGGCAGCCTCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: QRGQLCAPQIGIVPRPTRRSDFT*GAASPN
Trigger: GTTCGGAGAGGCTGCCCCCCAGGTGAAGTCAGAGCG...CCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCGCTCTGACTTCACCTaGGGGGCAGCCTCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFRSDFT*GAASPN
Trigger: GTTCGGAGAGGCTGCCCCCCAGGTGAAGTCAGAGCG...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCTTGGTTGGGGTGCGGTaGAGGGTAGGCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGHEMSLPPGTLASRLIFLVGVR*RVGAGC
Trigger: ACAGCCCGCGCCTACCCTCCACCGCACCCCAACCAA...GAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGAGACCCGATATGGTCCATTGGTTGGGGTGCGGTaGAGGGTAGGCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SHRSLLAALNGPETRYGPLVGVR*RVGAGC
Trigger: ACAGCCCGCGCCTACCCTCCACCGCACCCCAACCAA...TGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCAGTGGTGTGCTTGGTTaGGGTGCGGTGGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTASGVLG*GAVEGR
Trigger: CCTACCCTCCACCGCACCCCAACCAAGCACACCACT...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCGTGGACAGTGGCAGTaGCTGGGGCAGCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTRGQWQ*LGQREH
Trigger: GTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACG...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGACCTCGTTGTCATGGCTaGCCCCAGACTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLPQLPWRCVAGISVHTGPRCHG*PQTLRG
Trigger: CCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGG...TCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCTGGAGGTGGTTTCCATaGGGTTCGCCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTAWRWFP*GSPLRA
Trigger: AGCCCTGAGCGGCGAACCCCATGGAAACCACCTCCA...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGATGGGGCTGGTGGGGCTaGCCACAGAGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRWGWWG*PQSSAG
Trigger: GCCGGCGGAACTCTGTGGCCAGCCCCACCAGCCCCA...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTASVWG*WGWPQS
Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCTGGGCAGCGAGCGTGTaGGGCTGGTGGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVWAASV*GWWGWP
Trigger: TGGCCAGCCCCACCAGCCCCACACGCTCGCTGCCCA...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCAACTGGAGGCACTCCTaGGCAGCGAGCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVNWRHS*AASVWG
Trigger: GCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTT...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCTCAGGTTTGCAGAGCTaGGGGCCAGCGCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTSGLQS*GPAPRV
Trigger: CACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGA...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAAGGCAGGGGTTGGTTaGGGGCGCTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTKAGVG*GRSYST
Trigger: GGTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTT...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCGGAGAAGGCAGGGGTTaGTTGGGGGCGCTCATACAG +
Preference number: 4 (lower is better)
Translates to: PQLPWRCVAGISVHTGVSGEGRG*LGALIQ
Trigger: CTGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCC...GGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGGGTGTGGGGGTCCTTaGTGCGGAGGAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLGCGGP*CGGGGC
Trigger: ACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGACGGGTGGCACGGGTGTaGGGGTCCTTGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRRVARV*GSLVRR
Trigger: CCTCCGCACCAAGGACCCCCACACCCGTGCCACCCG...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTAGCCTTCGGCAGCCTCTaGGGGCAGGCCACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HEMSLPPGTLASRLIFSLAFGSL*GQATGL
Trigger: AAGCCCTGTGGCCTGCCCCCAGAGGCTGCCGAAGGC...TAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGCCTTCGGCAGCCTCTaGGGGCAGGCCACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTAFGSL*GQATGL
Trigger: AAGCCCTGTGGCCTGCCCCCAGAGGCTGCCGAAGGC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQGDTGG*GHPQQR
Trigger: CCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCC...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAGGGAGCCAGGGGCCTTaGAAGATTAGGTTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: HPTQTAVLPSVGREPTAPGSQGP*KIRLAH
Trigger: GTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCC...TGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAAGAGGGGGTTCCTGAATaGAACCTGGTTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQEGVPE*NLVGHG
Trigger: CCCATGCCCAACCAGGTTCCATTCAGGAACCCCCTC...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCGGGCACAGAGGGGGTTaGGCTCTTTCAGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTGHRGG*ALSGIP
Trigger: TGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCC...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCGGTGTGAGTGGTGAGTaGCCCGTGGCCCGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGHEMSLPPGTLASRLIFGVSGE*PVARRQ
Trigger: CTGCCTACGGGCCACGGGCCACTCACCACTCACACC...GAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTCAGCAGGGCACAAGGAGTGGTGTGCTTGGTTGGGGTGCGGTGGAGGGTAGGTCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PQQGTRSGVLGWGAVEGRSLRIE*EHSKWG
Trigger: TCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGA...CCTACCCTCCACCGCACCCCAACCAAGCACACCACTCCTTGTGCCCTGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTTLRSS*SFRLRA
Trigger: GGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGT...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFDLLLH*HLAFQG
Trigger: GCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATC...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCTACGTCCTCTTGGCTaGGCTGAGCAAGACGCATGC +
Preference number: 4 (lower is better)
Translates to: EPTAPTALAMRGRDFCSHLRPLG*AEQDAC
Trigger: GCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAG...GTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTCCAAGCCTTGGGTGGTaGGGGGCGCTCGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTPSLGW*GALGQR
Trigger: TCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGG...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATCCAAGCCTTGGGTGGTaGGGGGCGCTCGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNPSLGW*GALGQR
Trigger: TCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGG...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGAGACAGGGGGCGCCGTaGAACTCCTCGAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRRQGAP*NSSSVG
Trigger: TCCCACACTCGAGGAGTTTCACGGCGCCCCCTGTCT...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp TCACCTGAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTGGGGCCTCCTGTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SPEDFTGIYRVPLLWGLLSRGRG*WLDKVL
Trigger: AAGGACTTTGTCCAGCCATCAGCCACGGCCTCTCGA...CAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR TCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCACTCTGCTCAGGACTaGGAGCAACCACACCCCAGG +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFHSAQD*EQPHPR
Trigger: CCTGGGGTGTGGTTGCTCTCAGTCCTGAGCAGAGTG...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTAGCTACTCGGGAGGGTaGGGCAGGAGAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EGVGLFQASHPDCSPSKCSYSGG*GRRTQE
Trigger: CTCCTGGGTTCTCCTGCCTCACCCTCCCGAGTAGCT...ACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATATCCTGCAGGGTCCGCTaGCGGTCAAGCAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PFLPAPWLQGSSSAYNLISCRVR*RSSSPR
Trigger: GCGGGGGCTGCTTGACCGGCAGCGGACCCTGCAGGA...TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGAGCCGCGATCTGCTGTTaGACTGACACCTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: ARSAVCSPDWNRAQANKGAAICC*TDTSRS
Trigger: GGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGC...TCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYAAAAI*CCTDTS
Trigger: CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGC...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTAAAAI*CCTDTS
Trigger: CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGCTGAGCAAGACGCATaGCCAGGCAGACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPAEQDA*PGRLPG
Trigger: CCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGC...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTTCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAAT +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTSGSPG*RTTDEN
Trigger: ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGA...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCTGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVCCCGG*ELRRGR
Trigger: CCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACA...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTTGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGCCCGG*ELRRGR
Trigger: CCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACA...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGAGACCCGATATGGTCCATGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SHRSLLAALNGPETRYGPCCCGG*ELRRGR
Trigger: CCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACA...TGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQGPQNC*CGGCEL
Trigger: TAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCC...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVGPQNC*CGGCEL
Trigger: TAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCC...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCGGAGGAGGGGGCTGTTaGTGTCAGCTGCATACACAG +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTGGGGC*CQLHTQ
Trigger: CTGTGTATGCAGCTGACAGCAACAGCCCCCTCCTCC...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACAGCAGAGGGTTTGGATaGACCTCAGGGCCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: EPTAPTALAMRGRDFCSHSRGFG*TSGPSA
Trigger: TGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCT...GTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACCACGAGTCTTGCCAATaGCAGAGAGTGCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANHESCQ*QRVLWG
Trigger: ACCCCACAGCACTCTCTGGCATTGGCAAGACTCGTG...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CCA 90 bp TCACCTGAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTGGGGCCTCCTGCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPEDFTGIYRVPLLWGLLLLRGP*VTATSL
Trigger: AAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAG...CAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACCAGCAAGTGGGGAGCTaGGCGGACTTACAACGCCTC +
Preference number: 4 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDQQVGS*ADLQRL
Trigger: GAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTGCTG...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAAATGTCTGGACCCACTTaGCCCTGGTACCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQMSGPT*PWYLGS
Trigger: GGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACAT...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000603986.6
CDS-3UTR CCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACTTGGTTGGGGTGCGGTaGAGGGTAGGCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYLVGVR*RVGAGC
Trigger: ACAGCCCGCGCCTACCCTCCACCGCACCCCAACCAA...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCAGCAGGGCACAAGGAGTaGTGTGCTTGGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSAGHKE*CAWLGC
Trigger: GCACCCCAACCAAGCACACCACTCCTTGTGCCCTGC...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGGACAGTGGCAGTGGCTaGGGCAGCGGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: NCCYQCPRSPPPGPHGLMDSGSG*GSGSTG
Trigger: CCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTC...CATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGACAGTGGCAGTGGCTaGGGCAGCGGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNDSGSG*GSGSTG
Trigger: CCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTC...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGACGTGGACAGTGGCAGTaGCTGGGGCAGCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRRGQWQ*LGQREH
Trigger: GTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACG...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCTGGTCCCAAGCCTTaGGTGGTGAGGGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNAGPKP*VVRGAR
Trigger: CCGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGC...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCAGCGTGTGGGGCTGGTaGGGCTGGCCACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTSVWGW*GWPQSS
Trigger: GGAACTCTGTGGCCAGCCCCACCAGCCCCACACGCT...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCTGGGCAGCGAGCGTGTaGGGCTGGTGGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSWAASV*GWWGWP
Trigger: TGGCCAGCCCCACCAGCCCCACACGCTCGCTGCCCA...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAGGGTGTGGGGGTCCTTaGTGCGGAGGAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRGCGGP*CGGGGC
Trigger: ACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCC...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATACGGGTGGCACGGGTGTaGGGGTCCTTGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PFLPAPWLQGSSSAYNLIRVARV*GSLVRR
Trigger: CCTCCGCACCAAGGACCCCCACACCCGTGCCACCCG...TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCCCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTPQQRV*MHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGG...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCCGAGGGGATACGGGTaGGTGGGGGCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLPRGYG*VGASTA
Trigger: TGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTGAGGAAGGGTGGGTGTaGCGGGCCCACGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTEEGWV*RAHGRE
Trigger: CTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTC...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACTCTGGGTGTCAGAACTaGAGGACTGCTCCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANSGCQN*RTAPPL
Trigger: TAGAGGGGGAGCAGTCCTCCAGTTCTGACACCCAGA...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGTGTGCTCCCCAGATTaGAATCGTGCCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTVCSPD*NRAQAN
Trigger: GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACAC...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
3UTR CAA 72 bp CCAGGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATaGGAATCGTGCCCAGGCCAACAAGGGACATATCAG +
Preference number: 4 (lower is better)
Translates to: PGPSEVSCVLPR*ESCPGQQGTYQ
Trigger: CTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACATCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTSLRIE*EHSKWG
Trigger: TCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGA...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCTCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GEWPVARRQTSPEDFTGISLRIE*EHSKWG
Trigger: TCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGA...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp CAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QRGQLCAPQIGIVPRPTRTLRSS*SFRLRA
Trigger: GGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGT...CCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AACGAGCGCTCAGCTCCGGGGGATACAGGAAGTCCGCGTAGTATCTGCCAGAGATCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: NERSAPGDTGSPRSICQRSRGRG*WLDKVC
Trigger: GCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGA...TCTCTGGCAGATACTACGCGGACTTCCTGTATCCCCCGGAGCTGAGCGCTCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp CCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATACCAAGCCTTGGGTGGTaGGGGGCGCTCGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PFLPAPWLQGSSSAYNLIPSLGW*GALGQR
Trigger: TCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGG...TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCTATGGAGGGGGTTCCTaGATGGAACCTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GEWPVARRQTSPEDFTGIYGGGS*MEPGWA
Trigger: TGCCCAACCAGGTTCCATTCAGGAACCCCCTCCATA...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AAGCTAGCTGAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGAAACAGCAAGGGGCATaGGATGTCCCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KLAEGPQSPAQCERRSRVKQQGA*DVPSSR
Trigger: CCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTT...CACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTCAGCTAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAGGCTCAGGGCCTCCTaGAGGGTCCGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: PFLPAPWLQGSSSAYNLIRLRAS*RVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCT...TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTGCCGGACCACTGACGAGAATAAAGTCTGCTTGACCTaGCCTTTCAGAATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PPGGSPSGSPGCRTTDENKVCLT*PFRIRV
Trigger: CACACGGATTCTGAAAGGGCAGGTCAAGCAGACTTT...ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGCACAAGGAGTGGTGTaGTTGGTTGGGGTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPAQGVV*LVGVRW
Trigger: CCACCGCACCCCAACCAAGCACACCACTCCTTGTGC...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACGCTGAGCAAGACGCATaGCCAGGCAGACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYAEQDA*PGRLPG
Trigger: CCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGC...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCTGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTCCCGG*ELRRGR
Trigger: CCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACA...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTAGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: HEMSLPPGTLASRLIFSLGPQNC*CGGCEL
Trigger: TAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCC...TAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGCTGTTGCTGTCAGCTaGATACACAGGTGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQAVAVS*IHRWWA
Trigger: GGCCCACCACCTGTGTATGCAGCTGACAGCAACAGC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCGCTGTTGCTGTCAGCTaGATACACAGGTGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFAVAVS*IHRWWA
Trigger: GGCCCACCACCTGTGTATGCAGCTGACAGCAACAGC...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp AGAGGCCATGGGCACAGAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGCCCAGATTGGAATCGTaGCCAGGCCAACAAGGGACA +
Preference number: 4 (lower is better)
Translates to: RGHGHRGGWALSGIPPRLPRLES*PGQQGT
Trigger: TGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGG...CAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCATGGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCGCGAGGTCAGCTGTGTaGTCCCCAGATTGGAATCGT +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTAARSAV*SPDWNR
Trigger: ACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCACTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSLLRGP*VTATSL
Trigger: AAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAG...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCAGCAAGTGGGGAGCTaGGCGGACTTACAACGCCTC +
Preference number: 4 (lower is better)
Translates to: LFQASHPDCSPSKCGQRAQQVGS*ADLQRL
Trigger: GAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTGCTG...GGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTATCCGTGTGGATGTCTaGACCCACTTGGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTIRVDV*THLALV
Trigger: TACCAGGGCCAAGTGGGTCCAGACATCCACACGGAT...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000603986.6
CDS-3UTR CCA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCATCCGTGTGGATGTCTaGACCCACTTGGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: GEWPVARRQTSPEDFTGIIRVDV*THLALV
Trigger: TACCAGGGCCAAGTGGGTCCAGACATCCACACGGAT...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCGCTCTGACTTCACCTaGGGGGCAGCCTCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLRSDFT*GAASPN
Trigger: GTTCGGAGAGGCTGCCCCCCAGGTGAAGTCAGAGCG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCGTCTCGACCAGGCCCTaGCTCCGGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVVSTRP*LRLVVA
Trigger: TGCCACTACCAGCCGGAGCCAGGGCCTGGTCGAGAC...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGGTCAGCTCCGCCTCCTaGAGACACACTTTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GSFRHPTQTAVLPSVGREVSSAS*RHTLRS
Trigger: GCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGAC...CTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGGTCAGCTCCGCCTCCTaGAGACACACTTTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRVSSAS*RHTLRS
Trigger: GCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGAC...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATACGCCGGCGGACCAACTaGGGCCGTTCACCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PFLPAPWLQGSSSAYNLIRRRTN*GRSPGS
Trigger: AGAGCCTGGTGAACGGCCCCAGTTGGTCCGCCGGCG...TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCAGTGGTGTGCTTGGTTaGGGTGCGGTGGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVSGVLG*GAVEGR
Trigger: CCTACCCTCCACCGCACCCCAACCAAGCACACCACT...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGAGTGGTGTGCTTGGTTaGGGTGCGGTGGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGSGVLG*GAVEGR
Trigger: CCTACCCTCCACCGCACCCCAACCAAGCACACCACT...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCGCAGGGCACAAGGAGTaGTGTGCTTGGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LFQASHPDCSPSKCGQRAAGHKE*CAWLGC
Trigger: GCACCCCAACCAAGCACACCACTCCTTGTGCCCTGC...GGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGAGACCCGATATGGTCCAGCAGGGCACAAGGAGTaGTGTGCTTGGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SHRSLLAALNGPETRYGPAGHKE*CAWLGC
Trigger: GCACCCCAACCAAGCACACCACTCCTTGTGCCCTGC...TGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGACAGTGGCAGTGGCTaGGGCAGCGGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSDSGSG*GSGSTG
Trigger: CCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACCCCAGGCAGACTCCCTaGGTGGTGATCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYPRQTP*VVITDP
Trigger: GGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGG...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGAGAGAAGCAGCCATaGGGCTCCTCGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTREKQP*GSSLSW
Trigger: CCATGACAACGAGGAGCCCCATGGCTGCTTCTCTCT...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTAGAGAGAAGCAGCCATaGGGCTCCTCGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTREKQP*GSSLSW
Trigger: CCATGACAACGAGGAGCCCCATGGCTGCTTCTCTCT...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTGATACTGCCCGCAGCTaGTCCCAAGCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGDTARS*SQALGG
Trigger: ACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATC...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGATACTGCCCGCAGCTaGTCCCAAGCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGDTARS*SQALGG
Trigger: ACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATC...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGTGGAGGTGGTTTCCATaGGGTTCGCCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRWRWFP*GSPLRA
Trigger: AGCCCTGAGCGGCGAACCCCATGGAAACCACCTCCA...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGGCCAGTCAGCTCCGCCTCCTGGAGACACACTTTGCGGAGCTCCTGAAGTTTTGGAGGTGGTTTCCATaGGGTTCGCCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LASQLRLLETHFAELLKFWRWFP*GSPLRA
Trigger: AGCCCTGAGCGGCGAACCCCATGGAAACCACCTCCA...AAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGACTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CCA 90 bp AATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGAACTGGAGGCACTCCTaGGCAGCGAGCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: NCCYQCPRSPPPGPHGLMNWRHS*AASVWG
Trigger: GCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTT...CATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGAAGGCAGGGGTTGGTTaGGGGCGCTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQKAGVG*GRSYST
Trigger: GGTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTT...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGAAGGCAGGGGTTGGTTaGGGGCGCTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGKAGVG*GRSYST
Trigger: GGTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTT...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTAAGGCAGGGGTTGGTTaGGGGCGCTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPKAGVG*GRSYST
Trigger: GGTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTT...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTGGAGAAGGCAGGGGTTaGTTGGGGGCGCTCATACAG +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGGEGRG*LGALIQ
Trigger: CTGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCC...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTTGCATACACAGGTGGTaGGCCGGGGAGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGCIHRW*AGEHGE
Trigger: CTCACCATGCTCCCCGGCCCACCACCTGTGTATGCA...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCTGCATACACAGGTGGTaGGCCGGGGAGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVCIHRW*AGEHGE
Trigger: CTCACCATGCTCCCCGGCCCACCACCTGTGTATGCA...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRGDTGG*GHPQQR
Trigger: CCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCC...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTGDTGG*GHPQQR
Trigger: CCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCC...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGACCGAGGGGATACGGGTaGGTGGGGGCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRPRGYG*VGASTA
Trigger: TGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGG...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCCCGAGGGGATACGGGTaGGTGGGGGCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVPRGYG*VGASTA
Trigger: TGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGG...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGAGGAAGGGTGGGTGTaGCGGGCCCACGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSEEGWV*RAHGRE
Trigger: CTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCGGGAGCCAGGGGCCTTaGAAGATTAGGTTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVGSQGP*KIRLAH
Trigger: GTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCC...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAATGGAGGAAGGGGCTTaGGGTCCCCATGACATCATC +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTMEEGA*GPHDII
Trigger: GATGATGTCATGGGGACCCCAAGCCCCTTCCTCCAT...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCATGGAGGAAGGGGCTTaGGGTCCCCATGACATCATC +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTAMEEGA*GPHDII
Trigger: GATGATGTCATGGGGACCCCAAGCCCCTTCCTCCAT...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCTGCCCTGGCGATGCGTaGCAGGGATTTCTGTTCACA +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTACPGDA*QGFLFT
Trigger: TGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCA...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCAGTCCTTCCAAGTGTaGGCAGAGAGCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: GSFRHPTQTAVLPSVGREQSFQV*AESPLP
Trigger: GGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTG...CTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCAGGCTCGTTAAAGAGGTaGAGGCAGGCACAGGACAGC +
Preference number: 4 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSGSLKR*RQAQDS
Trigger: GCTGTCCTGTGCCTGCCTCCACCTCTTTAACGAGCC...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAAGGAGAGCTGATCAGCTaGCCTTTGACTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQGELIS*PLTSIL
Trigger: CAAGATGGAAGTCAAAGGTCAGCTGATCAGCTCTCC...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACTGGACAAAGTCTGCTTaGCCTGCCCTTTCAGAATCC +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANWTKSA*PALSES
Trigger: GGATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCA...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLDLLLH*HLAFQG
Trigger: GCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CGCGTAGTATCTTTAGAAGGGGTAGCAGGAATCCGGAGGACAGGGCGGGGAAGAGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVVSLEGVAGIRRTGRGRDLLLH*HLAFQG
Trigger: GCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATC...TCTTCCCCGCCCTGTCCTCCGGATTCCTGCTACCCCTTCTAAAGATACTACGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCTCCTCTTGGCTGAGCTaGGCAAGACGCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTSSWLS*ARRMPR
Trigger: CCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGA...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCCTACGTCCTCTTGGCTaGGCTGAGCAAGACGCATGC +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVLRPLG*AEQDAC
Trigger: GCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAG...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GAAAACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTACGTCCTCTTGGCTaGGCTGAGCAAGACGCATGC +
Preference number: 4 (lower is better)
Translates to: ENSKGHEMSLPPGTLASRLRPLG*AEQDAC
Trigger: GCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAG...CCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGAGGGAGCTGCTCTCTaGGTGCAGAACTACGTCCTC +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQEGAAL*VQNYVL
Trigger: GAGGACGTAGTTCTGCACTCAGAGAGCAGCTCCCTC...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CTGGCCAGTCAGCTCCGCCTCCTGGAGACACACTTTGCGGAGCTCCTGAAGTTTGAGGGAGCTGCTCTCTaGGTGCAGAACTACGTCCTC +
Preference number: 4 (lower is better)
Translates to: LASQLRLLETHFAELLKFEGAAL*VQNYVL
Trigger: GAGGACGTAGTTCTGCACTCAGAGAGCAGCTCCCTC...AAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGACTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp AAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCGAGGGAGCTGCTCTCTaGGTGCAGAACTACGTCCTC +
Preference number: 4 (lower is better)
Translates to: KGHEMSLPPGTLASRLIFEGAAL*VQNYVL
Trigger: GAGGACGTAGTTCTGCACTCAGAGAGCAGCTCCCTC...GAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGGCCGGGGAGCATGGTaGGGAGCCCATCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCGRGAW*GAHPGG
Trigger: CCCGCCGGGATGGGCTCCTCACCATGCTCCCCGGCC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATAGACAGGGGGCGCCGTaGAACTCCTCGAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNRQGAP*NSSSVG
Trigger: TCCCACACTCGAGGAGTTTCACGGCGCCCCCTGTCT...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAGACAGGGGGCGCCGTaGAACTCCTCGAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTRQGAP*NSSSVG
Trigger: TCCCACACTCGAGGAGTTTCACGGCGCCCCCTGTCT...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp AAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KGHEMSLPPGTLASRLIFSRGRG*WLDKVL
Trigger: CAAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGA...GAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACCCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GPARSAVCSPDWNRAQANPGDTL*GAPEVS
Trigger: TGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGG...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGCACAAGGAGTGGTGTaGTTGGTTGGGGTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTAQGVV*LVGVRW
Trigger: CCACCGCACCCCAACCAAGCACACCACTCCTTGTGC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGCACAAGGAGTGGTGTaGTTGGTTGGGGTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLAQGVV*LVGVRW
Trigger: CCACCGCACCCCAACCAAGCACACCACTCCTTGTGC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGCCGCGATCTGCTGTTaGACTGACACCTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLAAICC*TDTSRS
Trigger: GGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTAGCCGCGATCTGCTGTTaGACTGACACCTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: HEMSLPPGTLASRLIFSLAAICC*TDTSRS
Trigger: GGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGC...TAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGCTCCTCTAGCTCATaGAGCCTCCTCAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: PQLPWRCVAGISVHTGVSCSSSS*SLLSAS
Trigger: AGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCA...GGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAGCTGAGCAAGACGCATaGCCAGGCAGACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRAEQDA*PGRLPG
Trigger: CCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGC...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGAGCTGCTCTCTGAGTaGAGAACTACGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTELLSE*RTTSSW
Trigger: CCAAGAGGACGTAGTTCTGCACTCAGAGAGCAGCTC...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGTCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAAT +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQSGSPG*RTTDEN
Trigger: ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGA...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGAGGTGGAGGCAGGCACAGGACAGCACTTTCAGGCTCTGGGGCATGGAGAAAACCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: RGGGRHRTALSGSGAWRKPQNCC*GGCELR
Trigger: TCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGG...TTTTCTCCATGCCCCAGAGCCTGAAAGTGCTGTCCTGTGCCTGCCTCCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGCTGTTGCTGTCAGCTaGATACACAGGTGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQAVAVS*IHRWWA
Trigger: GGCCCACCACCTGTGTATGCAGCTGACAGCAACAGC...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AACGAGCGCTCAGCTCCGGGGGATACAGGAAGTCCGCGTAGTATCTGCCAGAGATCAGAACTGGAGGACTaGTCCCCCTCTAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: NERSAPGDTGSPRSICQRSELED*SPSSVR
Trigger: CCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGA...TCTCTGGCAGATACTACGCGGACTTCCTGTATCCCCCGGAGCTGAGCGCTCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp TCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGAGACCCGATATGGTCCATCAGAACTGGAGGACTaGTCCCCCTCTAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SHRSLLAALNGPETRYGPSELED*SPSSVR
Trigger: CCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGA...TGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGCATCCCACCCAGACTaGAGTCCTTCCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPASHPD*SPSKCG
Trigger: CCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGC...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGGACCCACTTGGCCCTaGTACCTTGGTTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLGPTWP*YLGSLR
Trigger: GCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGGACCCACTTGGCCCTaGTACCTTGGTTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTGPTWP*YLGSLR
Trigger: GCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACTTTCAGAATCCGTGTaGATGTCTGGACCCACTTGG +
Preference number: 4 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQLSESV*MSGPTW
Trigger: CCAAGTGGGTCCAGACATCCACACGGATTCTGAAAG...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000603986.6
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGAVERP*LMAGQS
Trigger: ACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGC...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPAVERP*LMAGQS
Trigger: ACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGC...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGAVERP*LMAGQS
Trigger: ACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGC...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGTCTCGACCAGGCCCTaGCTCCGGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSVSTRP*LRLVVA
Trigger: TGCCACTACCAGCCGGAGCCAGGGCCTGGTCGAGAC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496529.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCCTCGTTGTCATGGCTaGCCCCAGACTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLPRCHG*PQTLRG
Trigger: CCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCCCTCGTTGTCATGGCTaGCCCCAGACTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CQNWRTAPPLASGHLNERPRCHG*PQTLRG
Trigger: CCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGG...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR CCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACTGGAGGTGGTTTCCATaGGGTTCGCCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYWRWFP*GSPLRA
Trigger: AGCCCTGAGCGGCGAACCCCATGGAAACCACCTCCA...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCAGCTGCATACACAGGTaGTGGGCCGGGGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTSCIHR*WAGEHG
Trigger: ACCATGCTCCCCGGCCCACCACCTGTGTATGCAGCT...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGPQQRV*MHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGG...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCCCGAGGGGATACGGGTaGGTGGGGGCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSPRGYG*VGASTA
Trigger: TGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGG...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGSHSLA*ISSPSA
Trigger: GGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCT...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPSHSLA*ISSPSA
Trigger: GGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCT...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp GCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGATCTGGGTGTCAGAACTaGAGGACTGCTCCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: ARSAVCSPDWNRAQANKGSGCQN*RTAPPL
Trigger: TAGAGGGGGAGCAGTCCTCCAGTTCTGACACCCAGA...TCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGTGTGCTCCCCAGATTaGAATCGTGCCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGVCSPD*NRAQAN
Trigger: GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACAC...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGAGGGGGCTGTTGCTGTCAGCTGAACTGTAAACATAAATaGAGGAAGGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: WHGCGGPWCGGGGCCCQLNCKHK*RKGLGV
Trigger: GACCCCAAGCCCCTTCCTCCATTTATGTTTACAGTT...CAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR TCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGTCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQSLRIE*EHSKWG
Trigger: TCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGA...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAATGGTTCCCTTCGCATTaGGTGAGAGCACAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQWFPSH*VRAQQV
Trigger: CACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCA...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTGGAGAGCTGATCAGCTaGCCTTTGACTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTGELIS*PLTSIL
Trigger: CAAGATGGAAGTCAAAGGTCAGCTGATCAGCTCTCC...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCTACGTCCTCTTGGCTaGGCTGAGCAAGACGCATGC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLLRPLG*AEQDAC
Trigger: GCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGAGGGAGCTGCTCTCTaGGTGCAGAACTACGTCCTC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLEGAAL*VQNYVL
Trigger: GAGGACGTAGTTCTGCACTCAGAGAGCAGCTCCCTC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTAGAGGGAGCTGCTCTCTaGGTGCAGAACTACGTCCTC +
Preference number: 4 (lower is better)
Translates to: HEMSLPPGTLASRLIFSLEGAAL*VQNYVL
Trigger: GAGGACGTAGTTCTGCACTCAGAGAGCAGCTCCCTC...TAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGGCCGGGGAGCATGGTaGGGAGCCCATCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTGRGAW*GAHPGG
Trigger: CCCGCCGGGATGGGCTCCTCACCATGCTCCCCGGCC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCAGCAGCAGTGGCAGATaGCTTGGCCACCTCCCACTA +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTSSSGR*LGHLPL
Trigger: TAGTGGGAGGTGGCCAAGGCATCTGCCACTGCTGCT...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496529.6
CDS-3UTR GCA 90 bp GATGTACCAGTCCCGCAGCCCCTCCAGAGCCAGGTTCTTGTGGCCACTGCGTTCACTCTGAGAGGGAGCTaGTCTCTGAGTGCAGAACTA +
Preference number: 4 (lower is better)
Translates to: DVPVPQPLQSQVLVATAFTLRGS*SLSAEL
Trigger: TAGTTCTGCACTCAGAGAGCAGCTCCCTCTCAGAGT...GAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGGACTGGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR GCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCTCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAAT +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTSGSPG*RTTDEN
Trigger: ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGA...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCGCTGTTGCTGTCAGCTaGATACACAGGTGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CQNWRTAPPLASGHLNERAVAVS*IHRWWA
Trigger: GGCCCACCACCTGTGTATGCAGCTGACAGCAACAGC...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR GCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGGTTCTTGTGGCCACTaGGTTCACCAGCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNGSCGH*VHQPRG
Trigger: TCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACC...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCACCCAGATTGGAATCGTaGCCAGGCCAACAAGGGACA +
Preference number: 4 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPPRLES*PGQQGT
Trigger: TGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGG...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGGCGAGGTCAGCTGTGTaGTCCCCAGATTGGAATCGT +
Preference number: 4 (lower is better)
Translates to: GSFRHPTQTAVLPSVGREARSAV*SPDWNR
Trigger: ACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC...CTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTLLRGP*VTATSL
Trigger: AAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAG...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLLLRGP*VTATSL
Trigger: AAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGACAGCAAGTGGGGAGCTaGGCGGACTTACAACGCCTC +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRQQVGS*ADLQRL
Trigger: GAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTGCTG...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGATCCGTGTGGATGTCTaGACCCACTTGGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQIRVDV*THLALV
Trigger: TACCAGGGCCAAGTGGGTCCAGACATCCACACGGAT...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTAVERP*LMAGQS
Trigger: ACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGTCCGAACAGGGCAGCTaGGGCATTGAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQSEQGS*GIEGRR
Trigger: TCTCCTACCTTCAATGCCCCAGCTGCCCTGTTCGGA...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGAGACCCGATATGGTCCATCCGAACAGGGCAGCTaGGGCATTGAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SHRSLLAALNGPETRYGPSEQGS*GIEGRR
Trigger: TCTCCTACCTTCAATGCCCCAGCTGCCCTGTTCGGA...TGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCCGCTCTGACTTCACCTaGGGGGCAGCCTCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSRSDFT*GAASPN
Trigger: GTTCGGAGAGGCTGCCCCCCAGGTGAAGTCAGAGCG...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCGCAGGGCACAAGGAGTaGTGTGCTTGGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVAGHKE*CAWLGC
Trigger: GCACCCCAACCAAGCACACCACTCCTTGTGCCCTGC...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGACCTCGTTGTCATGGCTaGCCCCAGACTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRPRCHG*PQTLRG
Trigger: CCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGG...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATAAGGCAGGGGTTGGTTaGGGGCGCTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNKAGVG*GRSYST
Trigger: GGTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTT...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAGCTGCATACACAGGTaGTGGGCCGGGGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTSCIHR*WAGEHG
Trigger: ACCATGCTCCCCGGCCCACCACCTGTGTATGCAGCT...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACCCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYPQQRV*MHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGG...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCAGAGCCAGGTTCTTGTaGCCACTGCGTTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTRARFL*PLRSPA
Trigger: GGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCT...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGGAGGAAGGGTGGGTGTaGCGGGCCCACGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FLPAPWLQGSSSAYNLIKEEGWV*RAHGRE
Trigger: CTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTC...CTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGGAGTGGCGCCTGGCTaGGGGCCCCGTACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCGVAPG*GPRTAP
Trigger: AGGCGCTGTACGGGGCCCCCAGCCAGGCGCCACTCC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AGAGGTGGAGGCAGGCACAGGACAGCACTTTCAGGCTCTGGGGCATGGAGAAAAGTGTGCTCCCCAGATTaGAATCGTGCCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RGGGRHRTALSGSGAWRKVCSPD*NRAQAN
Trigger: GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACAC...TTTTCTCCATGCCCCAGAGCCTGAAAGTGCTGTCCTGTGCCTGCCTCCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACACTTGGAAGATTAGGTTaGCGCACTCTGCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTLGRLG*RTLLRT
Trigger: AGTCCTGAGCAGAGTGCGCCAACCTAATCTTCCAAG...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTTTCCTGAATGGAACCTaGTTGGGCATGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTFLNGT*LGMGTG
Trigger: TCCTGTTCCCATGCCCAACCAGGTTCCATTCAGGAA...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTTGCCCTGGCGATGCGTaGCAGGGATTTCTGTTCACA +
Preference number: 4 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPCPGDA*QGFLFT
Trigger: TGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCA...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAGGGCACAGAGGGGGTTaGGCTCTTTCAGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRGHRGG*ALSGIP
Trigger: TGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCC...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCGGTTTGCTTAAAAAGTaGTGGATTGGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PQLPWRCVAGISVHTGVSGLLKK*WIGAGC
Trigger: GCACCCAGCCCCAATCCACCACTTTTTAAGCAAACC...GGAGACTCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTTGGTTCCCTTCGCATTaGGTGAGAGCACAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGWFPSH*VRAQQV
Trigger: CACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCA...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRTLRSS*SFRLRA
Trigger: GGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGT...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAATCCCCATAAAGATCTaGTGGAGGTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: AQRGQLCAPQIGIVPRPTIPIKI*WRWFPW
Trigger: CCATGGAAACCACCTCCATCAGATCTTTATGGGGAT...TGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTGGCCGGGGAGCATGGTaGGGAGCCCATCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPGRGAW*GAHPGG
Trigger: CCCGCCGGGATGGGCTCCTCACCATGCTCCCCGGCC...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGTCATGTGCAGTAGAGTaGCCCTGTGCCATCACAGCA +
Preference number: 4 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQSCAVE*PCAITA
Trigger: TGCTGTGATGGCACAGGGTCACTCTACTGCACATGA...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp TGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAAGGGGTCAGACCAGTGTCGTCCCCAGCACAGTGTaGGAGAAGAAGCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: WNRAQANKGHIRRGQTSVVPSTV*EKKQGV
Trigger: GACACCCTGCTTCTTCTCTCACACTGTGCTGGGGAC...GACACTGGTCTGACCCCTTCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR TCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGAGTCCCCAGCACAGTGTaGGAGAAGAAGCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRVPSTV*EKKQGV
Trigger: GACACCCTGCTTCTTCTCTCACACTGTGCTGGGGAC...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCTATGGAGGGGGTTCCTaGATGGAACCTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CQNWRTAPPLASGHLNERYGGGS*MEPGWA
Trigger: TGCCCAACCAGGTTCCATTCAGGAACCCCCTCCATA...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCATGCCCTAAATGGCCCTaGGACCCGATATGGTCCATT +
Preference number: 4 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPCPKWP*DPIWSI
Trigger: AATGGACCATATCGGGTCTCAGGGCCATTTAGGGCA...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCTGCCCTAAATGGCCCTaGGACCCGATATGGTCCATT +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVCPKWP*DPIWSI
Trigger: AATGGACCATATCGGGTCTCAGGGCCATTTAGGGCA...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATTCCTGCAGGGTCCGCTaGCGGTCAAGCAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHSCRVR*RSSSPR
Trigger: GCGGGGGCTGCTTGACCGGCAGCGGACCCTGCAGGA...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTTCCTGCAGGGTCCGCTaGCGGTCAAGCAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSSCRVR*RSSSPR
Trigger: GCGGGGGCTGCTTGACCGGCAGCGGACCCTGCAGGA...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTGCCGGCGCTGCTCGGTaGTCAGATCAGGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAAGAAR*SDQGPR
Trigger: CCTTGGCCCCTGATCTGAGCACCGAGCAGCGCCGGC...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCATGCAGCCTCCTCAGTaGATCTGCCTGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSMQPPQ*ICLDLA
Trigger: CGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCAT...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCATGCTCCTCTAGCTCATaGAGCCTCCTCAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: SVREEAGCQTPSWAYGEPCSSSS*SLLSAS
Trigger: AGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCA...TGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGACGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRRTSLS*SSSSCS
Trigger: GCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCG...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATCGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNRTSLS*SSSSCS
Trigger: GCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCG...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATTCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAAT +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNSGSPG*RTTDEN
Trigger: ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGA...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTGCTGTTGCTGTCAGCTaGATACACAGGTGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTAVAVS*IHRWWA
Trigger: GGCCCACCACCTGTGTATGCAGCTGACAGCAACAGC...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGGAGGAGGGGGCTGTTaGTGTCAGCTGCATACACAG +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRGGGGC*CQLHTQ
Trigger: CTGTGTATGCAGCTGACAGCAACAGCCCCCTCCTCC...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATAGCAGAGGGTTTGGATaGACCTCAGGGCCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNSRGFG*TSGPSA
Trigger: TGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCT...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAGCAGAGGGTTTGGATaGACCTCAGGGCCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTSRGFG*TSGPSA
Trigger: TGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCT...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGGTTCTTGTGGCCACTaGGTTCACCAGCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSGSCGH*VHQPRG
Trigger: TCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCGATATCTTCGCCATCTaGCTTACGAGACCCCTACCC +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVDIFAI*LTRPLP
Trigger: GGGTAGGGGTCTCGTAAGGCAGATGGCGAAGATATC...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTTCAGAACTGGAGGACTaGTCCCCCTCTAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTSELED*SPSSVR
Trigger: CCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGA...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR GCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCCCCAGATTGGAATCGTaGCCAGGCCAACAAGGGACA +
Preference number: 4 (lower is better)
Translates to: CQNWRTAPPLASGHLNERPRLES*PGQQGT
Trigger: TGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGG...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR CCA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCACTTTCAGAATCCGTGTaGATGTCTGGACCCACTTGG +
Preference number: 4 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSLSESV*MSGPTW
Trigger: CCAAGTGGGTCCAGACATCCACACGGATTCTGAAAG...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS-3UTR CCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRAVERP*LMAGQS
Trigger: ACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGC...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCAGTGGTGTGCTTGGTTaGGGTGCGGTGGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSSGVLG*GAVEGR
Trigger: CCTACCCTCCACCGCACCCCAACCAAGCACACCACT...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCAGAGAGAAGCAGCCATaGGGCTCCTCGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTREKQP*GSSLSW
Trigger: CCATGACAACGAGGAGCCCCATGGCTGCTTCTCTCT...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGAGAGAGAAGCAGCCATaGGGCTCCTCGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLREKQP*GSSLSW
Trigger: CCATGACAACGAGGAGCCCCATGGCTGCTTCTCTCT...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGATGGGGCTGGTGGGGCTaGCCACAGAGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGWGWWG*PQSSAG
Trigger: GCCGGCGGAACTCTGTGGCCAGCCCCACCAGCCCCA...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATTGGGGCTGGTGGGGCTaGCCACAGAGTTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHWGWWG*PQSSAG
Trigger: GCCGGCGGAACTCTGTGGCCAGCCCCACCAGCCCCA...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAGCGTGTGGGGCTGGTaGGGCTGGCCACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FLPAPWLQGSSSAYNLIKSVWGW*GWPQSS
Trigger: GGAACTCTGTGGCCAGCCCCACCAGCCCCACACGCT...CTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTTGGGCAGCGAGCGTGTaGGGCTGGTGGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSWAASV*GWWGWP
Trigger: TGGCCAGCCCCACCAGCCCCACACGCTCGCTGCCCA...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTTCAGGTTTGCAGAGCTaGGGGCCAGCGCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLASGLQS*GPAPRV
Trigger: CACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGA...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGGAGAAGGCAGGGGTTaGTTGGGGGCGCTCATACAG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSGEGRG*LGALIQ
Trigger: CTGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTCCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTPQQRV*MHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGG...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATAGAGCCAGGTTCTTGTaGCCACTGCGTTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNRARFL*PLRSPA
Trigger: GGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCT...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAGAGCCAGGTTCTTGTaGCCACTGCGTTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTRARFL*PLRSPA
Trigger: GGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCT...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCTTCCTCCCGGCACCCTaGCTTCAAGGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTFLPAP*LQGSSS
Trigger: TGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGCCGTGGCTGATGGCTaGACAAAGTCCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQAVADG*TKSFQN
Trigger: ATTCTGAAAGGACTTTGTCCAGCCATCAGCCACGGC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTTGGAAGATTAGGTTaGCGCACTCTGCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFLGRLG*RTLLRT
Trigger: AGTCCTGAGCAGAGTGCGCCAACCTAATCTTCCAAG...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACCTGAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTGGGGCCTCCTGTTGCTTAAAAAGTGGTaGATTGGGGCTGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SPEDFTGIYRVPLLWGLLLLKKW*IGAGCS
Trigger: ACTGCACCCAGCCCCAATCCACCACTTTTTAAGCAA...CAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTCAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTGTGTGGGTAATGTCTTaGGTCCAGATCCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTVWVMS*VQIHWY
Trigger: ATACCAGTGGATCTGGACCCAAGACATTACCCACAC...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACTGGTTCCCTTCGCATTaGGTGAGAGCACAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYWFPSH*VRAQQV
Trigger: CACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCA...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp AGAGGTGGAGGCAGGCACAGGACAGCACTTTCAGGCTCTGGGGCATGGAGAAAATCATGTGCAGTAGAGTaGCCCTGTGCCATCACAGCA +
Preference number: 4 (lower is better)
Translates to: RGGGRHRTALSGSGAWRKSCAVE*PCAITA
Trigger: TGCTGTGATGGCACAGGGTCACTCTACTGCACATGA...TTTTCTCCATGCCCCAGAGCCTGAAAGTGCTGTCCTGTGCCTGCCTCCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAAGGCTCAGGGCCTCCTaGAGGGTCCGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGRLRAS*RVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCT...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCCCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVPGDTL*GAPEVS
Trigger: TGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGG...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGCCGGCGCTGCTCGGTaGTCAGATCAGGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCAGAAR*SDQGPR
Trigger: CCTTGGCCCCTGATCTGAGCACCGAGCAGCGCCGGC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGTCAGAACTGGAGGACTGCTCCCCCTCTAGCGTCAGGTCACTTAAACGAGCGCTGCTCCTCTAGCTCATaGAGCCTCCTCAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: CQNWRTAPPLASGHLNERCSSSS*SLLSAS
Trigger: AGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCA...GCGCTCGTTTAAGTGACCTGACGCTAGAGGGGGAGCAGTCCTCCAGTTCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000606812.5
CDS-3UTR GCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACGAGCTGCTCTCTGAGTaGAGAACTACGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYELLSE*RTTSSW
Trigger: CCAAGAGGACGTAGTTCTGCACTCAGAGAGCAGCTC...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCACTCTGAGAGGGAGCTaGTCTCTGAGTGCAGAACTA +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVTLRGS*SLSAEL
Trigger: TAGTTCTGCACTCAGAGAGCAGCTCCCTCTCAGAGT...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGGAGGAGGGGGCTGTTaGTGTCAGCTGCATACACAG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSGGGGC*CQLHTQ
Trigger: CTGTGTATGCAGCTGACAGCAACAGCCCCCTCCTCC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGGATATCTTCGCCATCTaGCTTACGAGACCCCTACCC +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLDIFAI*LTRPLP
Trigger: GGGTAGGGGTCTCGTAAGGCAGATGGCGAAGATATC...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGATATCTTCGCCATCTaGCTTACGAGACCCCTACCC +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTDIFAI*LTRPLP
Trigger: GGGTAGGGGTCTCGTAAGGCAGATGGCGAAGATATC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCCTAATGCAGGTCATGTaGAGTAGAGTGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVLMQVM*SRVTLC
Trigger: GCACAGGGTCACTCTACTGCACATGACCTGCATTAG...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGAATTGCTGCTACCAGTaGCCAAGATCCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLNCCYQ*PRSPPP
Trigger: TGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACAATTGCTGCTACCAGTaGCCAAGATCCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYNCCYQ*PRSPPP
Trigger: TGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATCACGAGTCTTGCCAATaGCAGAGAGTGCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNHESCQ*QRVLWG
Trigger: ACCCCACAGCACTCTCTGGCATTGGCAAGACTCGTG...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536628.3
CDS-3UTR GCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTTCCTCTTCGGCGCCCTaGCCGTGGGCCGTGTTCGGC +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTSSSAP*PWAVFG
Trigger: GCCGAACACGGCCCACGGGCAGGGCGCCGAAGAGGA...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACACAGCCACGAGTCTTaGCAAGGGTCCCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGHSHES*QGSPRR
Trigger: GCGGCGCGGGGACCCTTGGCAAGACTCGTGGCTGTG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS-3UTR CCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTCTTTCAGAATCCGTGTaGATGTCTGGACCCACTTGG +
Preference number: 4 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPLSESV*MSGPTW
Trigger: CCAAGTGGGTCCAGACATCCACACGGATTCTGAAAG...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATCACTCAGGGGGCAGCTaGCCAGTCAGCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHHSGGS*PVSSAS
Trigger: GGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAGTG...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCCACTCAGGGGGCAGCTaGCCAGTCAGCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCHSGGS*PVSSAS
Trigger: GGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAGTG...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTCACTCAGGGGGCAGCTaGCCAGTCAGCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSHSGGS*PVSSAS
Trigger: GGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAGTG...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACACTCAGGGGGCAGCTaGCCAGTCAGCTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGHSGGS*PVSSAS
Trigger: GGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAGTG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCCGCCGGCGGACCAACTaGGGCCGTTCACCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCRRRTN*GRSPGS
Trigger: AGAGCCTGGTGAACGGCCCCAGTTGGTCCGCCGGCG...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACCTCAGTGCATCTGCCTaGACCTGGCGCCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHLSASA*TWRRRR
Trigger: CCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAG...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAGAGAGAAGCAGCCATaGGGCTCCTCGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTREKQP*GSSLSW
Trigger: CCATGACAACGAGGAGCCCCATGGCTGCTTCTCTCT...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCTGGTCCCAAGCCTTaGGTGGTGAGGGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSAGPKP*VVRGAR
Trigger: CCGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGC...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAGCTGGTCCCAAGCCTTaGGTGGTGAGGGGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGAGPKP*VVRGAR
Trigger: CCGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGC...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGGGTGTGGGGGTCCTTaGTGCGGAGGAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSGCGGP*CGGGGC
Trigger: ACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCC...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCCCACAGCAGAGGGTTTaGATGCACCTCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSPQQRV*MHLRAF
Trigger: GAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGG...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGAGGAAGGGTGGGTGTaGCGGGCCCACGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCEEGWV*RAHGRE
Trigger: CTCCCTTCCGTGGGCCCGCCACACCCACCCTTCCTC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGTTCCTCCCGGCACCCTaGCTTCAAGGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: NCCYQCPRSPPPGPHGLMFLPAP*LQGSSS
Trigger: TGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA...CATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTTTCCTCCCGGCACCCTaGCTTCAAGGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTFLPAP*LQGSSS
Trigger: TGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAGGCTCGTTAAAGAGGTaGAGGCAGGCACAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PFLPAPWLQGSSSAYNLIGSLKR*RQAQDS
Trigger: GCTGTCCTGTGCCTGCCTCCACCTCTTTAACGAGCC...TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTATCCCCATAAAGATCTaGTGGAGGTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPIPIKI*WRWFPW
Trigger: CCATGGAAACCACCTCCATCAGATCTTTATGGGGAT...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCGTTGGAGGAAGACAGTaGATACCTAAGTCACAACTG +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFVGGRQ*IPKSQL
Trigger: CAGTTGTGACTTAGGTATTCACTGTCTTCCTCCAAC...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACATGAACCCAACCAGATaGGATCACAGTTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: EPTAPTALAMRGRDFCSHMNPTR*DHSFPF
Trigger: AAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCAT...GTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAGGCAGAGGTTGCAGTaGGCTGAGATTGCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FLPAPWLQGSSSAYNLIKRQRLQ*AEIAPL
Trigger: CAGCGGCGCAATCTCAGCTCACTGCAACCTCTGCCT...CTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGCCTGGCCAATATGGTaGAACCTTGTCTCTACTAAG +
Preference number: 4 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPAWPIW*NLVSTK
Trigger: CTTAGTAGAGACAAGGTTTCACCATATTGGCCAGGC...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACAGGCTCAGGGCCTCCTaGAGGGTCCGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHRLRAS*RVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCT...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGCCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLPGDTL*GAPEVS
Trigger: TGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGG...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGAAAAI*CCTDTS
Trigger: CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGC...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTGCTGAGCAAGACGCATaGCCAGGCAGACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAAEQDA*PGRLPG
Trigger: CCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGC...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACACTCTGAGAGGGAGCTaGTCTCTGAGTGCAGAACTA +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYTLRGS*SLSAEL
Trigger: TAGTTCTGCACTCAGAGAGCAGCTCCCTCTCAGAGT...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGAGGTGGAGGCAGGCACAGGACAGCACTTTCAGGCTCTGGGGCATGGAGAAAAACTCTGAGAGGGAGCTaGTCTCTGAGTGCAGAACTA +
Preference number: 4 (lower is better)
Translates to: RGGGRHRTALSGSGAWRKTLRGS*SLSAEL
Trigger: TAGTTCTGCACTCAGAGAGCAGCTCCCTCTCAGAGT...TTTTCTCCATGCCCCAGAGCCTGAAAGTGCTGTCCTGTGCCTGCCTCCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATTGCTGCTACCAGTaGCCAAGATCCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTNCCYQ*PRSPPP
Trigger: TGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGGGCAGAGAGCCCACTaGCCCAACTGCCCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCGQRAH*PNCPGD
Trigger: ATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR GCA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGCAACTTGTGTGGGTTTaGTTAAAAAGTGGTGGATTG +
Preference number: 4 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKQLVWV*LKSGGL
Trigger: CAATCCACCACTTTTTAAGCAAACCCACACAAGTTG...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATTGGGCCGTGTTCGGCTaGGCTACCGTTAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHWAVFG*ATVSRG
Trigger: CCCACGGCTAACGGTAGCGCAGCCGAACACGGCCCA...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS-3UTR CCA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGCAGCAAGTGGGGAGCTaGGCGGACTTACAACGCCTC +
Preference number: 4 (lower is better)
Translates to: FLPAPWLQGSSSAYNLIKQQVGS*ADLQRL
Trigger: GAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTGCTG...CTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCATCCGTGTGGATGTCTaGACCCACTTGGCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSIRVDV*THLALV
Trigger: TACCAGGGCCAAGTGGGTCCAGACATCCACACGGAT...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTCGCCGGCGGACCAACTaGGGCCGTTCACCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTRRRTN*GRSPGS
Trigger: AGAGCCTGGTGAACGGCCCCAGTTGGTCCGCCGGCG...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGATTGGTTGGGGTGCGGTaGAGGGTAGGCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGLVGVR*RVGAGC
Trigger: ACAGCCCGCGCCTACCCTCCACCGCACCCCAACCAA...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACCGTGGACAGTGGCAGTaGCTGGGGCAGCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHRGQWQ*LGQREH
Trigger: GTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACG...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGAGCGTGTGGGGCTGGTaGGGCTGGCCACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSVWGW*GWPQSS
Trigger: GGAACTCTGTGGCCAGCCCCACCAGCCCCACACGCT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGCGAGCGTGTGGGGCTaGTGGGGCTGGCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTASVWG*WGWPQS
Trigger: ACTCTGTGGCCAGCCCCACCAGCCCCACACGCTCGC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCAACTGGAGGCACTCCTaGGCAGCGAGCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCNWRHS*AASVWG
Trigger: GCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTT...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATAACTGGAGGCACTCCTaGGCAGCGAGCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHNWRHS*AASVWG
Trigger: GCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTT...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACGGGTGTGGGGGTCCTTaGTGCGGAGGAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHGCGGP*CGGGGC
Trigger: ACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCC...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGGGTGTGGGGGTCCTTaGTGCGGAGGAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTGCGGP*CGGGGC
Trigger: ACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACGCCTTCGGCAGCCTCTaGGGGCAGGCCACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHAFGSL*GQATGL
Trigger: AAGCCCTGTGGCCTGCCCCCAGAGGCTGCCGAAGGC...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGGGGGATACGGGTGGGTaGGGGCATCCACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMGDTGG*GHPQQR
Trigger: CCTCTGCTGTGGATGCCCCCACCCACCCGTATCCCC...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATTCCACCAGGACCCCATaGACTAATGCAGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNSTRTP*TNAGHV
Trigger: CACATGACCTGCATTAGTCCATGGGGTCCTGGTGGA...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGAACTGTAAACATAAATaGAGGAAGGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QRGQLCAPQIGIVPRPTRNCKHK*RKGLGV
Trigger: GACCCCAAGCCCCTTCCTCCATTTATGTTTACAGTT...CCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATTCAGGGCAGAGGCCATaGGCACAGAGGGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHSGQRP*AQRGLG
Trigger: GCCCAACCCCCTCTGTGCCCATGGCCTCTGCCCTGA...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp CTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCTTGCTTAAAAAGTGGTaGATTGGGGCTGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LFQASHPDCSPSKCGQRALLKKW*IGAGCS
Trigger: ACTGCACCCAGCCCCAATCCACCACTTTTTAAGCAA...GGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CGCGTAGTATCTTTAGAAGGGGTAGCAGGAATCCGGAGGACAGGGCGGGGAAGAGGTTTGCTTAAAAAGTaGTGGATTGGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RVVSLEGVAGIRRTGRGRGLLKK*WIGAGC
Trigger: GCACCCAGCCCCAATCCACCACTTTTTAAGCAAACC...TCTTCCCCGCCCTGTCCTCCGGATTCCTGCTACCCCTTCTAAAGATACTACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATTGGACAAAGTCTGCTTaGCCTGCCCTTTCAGAATCC +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNWTKSA*PALSES
Trigger: GGATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCA...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR TCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCTCATGTGCAGTAGAGTaGCCCTGTGCCATCACAGCA +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSSCAVE*PCAITA
Trigger: TGCTGTGATGGCACAGGGTCACTCTACTGCACATGA...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCCGAACAGGGCAGCTTTaGCTTCCATCTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSRTGQL*LPSWCC
Trigger: ACAGCACCAAGATGGAAGTCAAAGCTGCCCTGTTCG...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536628.3
CDS-3UTR GCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTCCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTPGDTL*GAPEVS
Trigger: TGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGG...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGACCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRPGDTL*GAPEVS
Trigger: TGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGG...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGAAAGTCTGCTTGACCTaGCCTTTCAGAATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLKVCLT*PFRIRV
Trigger: CACACGGATTCTGAAAGGGCAGGTCAAGCAGACTTT...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR GCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTGCACAAGGAGTGGTGTaGTTGGTTGGGGTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAAQGVV*LVGVRW
Trigger: CCACCGCACCCCAACCAAGCACACCACTCCTTGTGC...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCTGAGCAAGACGCATaGCCAGGCAGACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHAEQDA*PGRLPG
Trigger: CCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGC...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGAGCTGCTCTCTGAGTaGAGAACTACGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSELLSE*RTTSSW
Trigger: CCAAGAGGACGTAGTTCTGCACTCAGAGAGCAGCTC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAGGGCCTCAGAACTGTTaGTGCGGCGGGTGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGGPQNC*CGGCEL
Trigger: TAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCC...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCTAATGCAGGTCATGTaGAGTAGAGTGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: NCCYQCPRSPPPGPHGLMLMQVM*SRVTLC
Trigger: GCACAGGGTCACTCTACTGCACATGACCTGCATTAG...CATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCTTGATAAAGAATTGCTaGTACCAGTGCCCAAGATCC +
Preference number: 4 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFLIKNC*YQCPRS
Trigger: GGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAA...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR GCA 90 bp CCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCGGACAACTTGTGTGGGTTTaGTTAAAAAGTGGTGGATTG +
Preference number: 4 (lower is better)
Translates to: PLPQLPWRCVAGISVHTGQLVWV*LKSGGL
Trigger: CAATCCACCACTTTTTAAGCAAACCCACACAAGTTG...TCCGGTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTGGACCCACTTGGCCCTaGTACCTTGGTTCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAGPTWP*YLGSLR
Trigger: GCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCC...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATCTTTCAGAATCCGTGTaGATGTCTGGACCCACTTGG +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNLSESV*MSGPTW
Trigger: CCAAGTGGGTCCAGACATCCACACGGATTCTGAAAG...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCCCCAGGCAGACTCCCTaGGTGGTGATCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCPRQTP*VVITDP
Trigger: GGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGG...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCCCAGGCAGACTCCCTaGGTGGTGATCACTGACCCC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMPRQTP*VVITDP
Trigger: GGGGTCAGTGATCACCACCCAGGGAGTCTGCCTGGG...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTCCTCGTTGTCATGGCTaGCCCCAGACTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAPRCHG*PQTLRG
Trigger: CCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGG...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCTCCACCAGGACCCCATaGACTAATGCAGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSSTRTP*TNAGHV
Trigger: CACATGACCTGCATTAGTCCATGGGGTCCTGGTGGA...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGTGTCAGACACCTTCCTaGGCCTACGGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMCQTPS*AYGEPG
Trigger: CCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACA...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGTTCCTGAATGGAACCTaGTTGGGCATGGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: NCCYQCPRSPPPGPHGLMFLNGT*LGMGTG
Trigger: TCCTGTTCCCATGCCCAACCAGGTTCCATTCAGGAA...CATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACTGCCCCAACTGCCCTaGCGATGCGTGGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGLPQLP*RCVAGI
Trigger: AATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLATLRSS*SFRLRA
Trigger: GGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGT...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSRGRG*WLDKVC
Trigger: GCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGA...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR TCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGDLLLH*HLAFQG
Trigger: GCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATC...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGATCTGCTGTTGCACTaGCACCTCGCGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSDLLLH*HLAFQG
Trigger: GCCCTGGAACGCGAGGTGTCAGTGCAACAGCAGATC...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGTCCTCTTGGCTGAGCTaGGCAAGACGCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSSWLS*ARRMPR
Trigger: CCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGA...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTATCCCCATAAAGATCTaGTGGAGGTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTIPIKI*WRWFPW
Trigger: CCATGGAAACCACCTCCATCAGATCTTTATGGGGAT...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACAGACAGGGGGCGCCGTaGAACTCCTCGAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHRQGAP*NSSSVG
Trigger: TCCCACACTCGAGGAGTTTCACGGCGCCCCCTGTCT...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCACTCTGCTCAGGACTaGGAGCAACCACACCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMHSAQD*EQPHPR
Trigger: CCTGGGGTGTGGTTGCTCTCAGTCCTGAGCAGAGTG...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGTTGGAGGAAGACAGTaGATACCTAAGTCACAACTG +
Preference number: 4 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTVGGRQ*IPKSQL
Trigger: CAGTTGTGACTTAGGTATTCACTGTCTTCCTCCAAC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp GAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTATGAACCCAACCAGATaGGATCACAGTTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: EGVGLFQASHPDCSPSKCMNPTR*DHSFPF
Trigger: AAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCAT...ACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAAAAGTCTGCTTGACCTaGCCTTTCAGAATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRKVCLT*PFRIRV
Trigger: CACACGGATTCTGAAAGGGCAGGTCAAGCAGACTTT...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR GCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGGCCGCGATCTGCTGTTaGACTGACACCTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMAAICC*TDTSRS
Trigger: GGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGC...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAGCCGCGATCTGCTGTTaGACTGACACCTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGAAICC*TDTSRS
Trigger: GGAACGCGAGGTGTCAGTGCAACAGCAGATCGCGGC...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTGCGGCCGCCGCGATCTaGTGTTGCACTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPAAAAI*CCTDTS
Trigger: CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGC...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGATGCAGCCTCCTCAGTaGATCTGCCTGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMMQPPQ*ICLDLA
Trigger: CGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCAT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATCCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHPQNCC*GGCELR
Trigger: TCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGG...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCCCTCAGAACTGTTGCTaGGGCGGGTGCGAGCTACGA +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCPQNCC*GGCELR
Trigger: TCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGG...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGGTTCTTGTGGCCACTaGGTTCACCAGCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCGSCGH*VHQPRG
Trigger: TCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATCAGCAAGTGGGGAGCTaGGCGGACTTACAACGCCTC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHQQVGS*ADLQRL
Trigger: GAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTGCTG...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACAGCAAGTGGGGAGCTaGGCGGACTTACAACGCCTC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGQQVGS*ADLQRL
Trigger: GAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTGCTG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGTCAGCTCCGCCTCCTaGAGACACACTTTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHVSSAS*RHTLRS
Trigger: GCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGAC...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAGTCAGCTCCGCCTCCTaGAGACACACTTTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGVSSAS*RHTLRS
Trigger: GCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGAC...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGAGTGGTGTGCTTGGTTaGGGTGCGGTGGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSGVLG*GAVEGR
Trigger: CCTACCCTCCACCGCACCCCAACCAAGCACACCACT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCAGGGCACAAGGAGTaGTGTGCTTGGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHAGHKE*CAWLGC
Trigger: GCACCCCAACCAAGCACACCACTCCTTGTGCCCTGC...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCAGGGCACAAGGAGTaGTGTGCTTGGTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSAGHKE*CAWLGC
Trigger: GCACCCCAACCAAGCACACCACTCCTTGTGCCCTGC...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCCTCGTTGTCATGGCTaGCCCCAGACTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMPRCHG*PQTLRG
Trigger: CCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGG...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGATACTGCCCGCAGCTaGTCCCAAGCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSDTARS*SQALGG
Trigger: ACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATC...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTTGGAGGTGGTTTCCATaGGGTTCGCCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSWRWFP*GSPLRA
Trigger: AGCCCTGAGCGGCGAACCCCATGGAAACCACCTCCA...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGATGGAGGTGGTTTCCATaGGGTTCGCCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGWRWFP*GSPLRA
Trigger: AGCCCTGAGCGGCGAACCCCATGGAAACCACCTCCA...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTAAGGCAGGGGTTGGTTaGGGGCGCTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSKAGVG*GRSYST
Trigger: GGTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTT...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGGAGAAGGCAGGGGTTaGTTGGGGGCGCTCATACAG +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCGEGRG*LGALIQ
Trigger: CTGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCAGCTGCATACACAGGTaGTGGGCCGGGGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCSCIHR*WAGEHG
Trigger: ACCATGCTCCCCGGCCCACCACCTGTGTATGCAGCT...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTCCGAGGGGATACGGGTaGGTGGGGGCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPPRGYG*VGASTA
Trigger: TGCTGTGGATGCCCCCACCCACCCGTATCCCCTCGG...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGATATGGTCCATTTTATaGAGGGGGTTCCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGIWSIL*RGFLNG
Trigger: TCCATTCAGGAACCCCCTCCATAAAATGGACCATAT...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCTGGGTCCAGATCCACTaGTATAAAAAGAAAAGCTTA +
Preference number: 4 (lower is better)
Translates to: TQTAVLPSVGREPTAPTAWVQIH*YKKKSL
Trigger: TAAGCTTTTCTTTTTATACCAGTGGATCTGGACCCA...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGTGGTTCCCTTCGCATTaGGTGAGAGCACAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: FLPAPWLQGSSSAYNLIKWFPSH*VRAQQV
Trigger: CACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCA...CTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTSRGRG*WLDKVC
Trigger: GCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGA...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR TCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHSRGRG*WLDKVC
Trigger: GCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGA...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR TCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACTCCTCTTGGCTGAGCTaGGCAAGACGCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHSSWLS*ARRMPR
Trigger: CCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGA...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCTACGTCCTCTTGGCTaGGCTGAGCAAGACGCATGC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMLRPLG*AEQDAC
Trigger: GCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAG...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCATCCCCATAAAGATCTaGTGGAGGTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSIPIKI*WRWFPW
Trigger: CCATGGAAACCACCTCCATCAGATCTTTATGGGGAT...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCAAACAGCAAGGGGCATaGGATGTCCCTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCKQQGA*DVPSSR
Trigger: CCGGGAGGAAGGGACATCTCATGCCCCTTGCTGTTT...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGCACAAGGAGTGGTGTaGTTGGTTGGGGTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTAQGVV*LVGVRW
Trigger: CCACCGCACCCCAACCAAGCACACCACTCCTTGTGC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACATGCAGCCTCCTCAGTaGATCTGCCTGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHMQPPQ*ICLDLA
Trigger: CGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCAT...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMRTSLS*SSSSCS
Trigger: GCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCG...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAGCTGTTGCTGTCAGCTaGATACACAGGTGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGAVAVS*IHRWWA
Trigger: GGCCCACCACCTGTGTATGCAGCTGACAGCAACAGC...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGGAGGAGGGGGCTGTTaGTGTCAGCTGCATACACAG +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHGGGGC*CQLHTQ
Trigger: CTGTGTATGCAGCTGACAGCAACAGCCCCCTCCTCC...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTAGCAGAGGGTTTGGATaGACCTCAGGGCCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSSRGFG*TSGPSA
Trigger: TGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCT...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGAGCAGAGGGTTTGGATaGACCTCAGGGCCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSRGFG*TSGPSA
Trigger: TGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATGTCTGGACCCACTTaGCCCTGGTACCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAMSGPT*PWYLGS
Trigger: GGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACAT...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGATACTGCCCGCAGCTaGTCCCAAGCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTDTARS*SQALGG
Trigger: ACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCCAGCTAGTTTCCTCATaGTCCAATTCATTAGCTATC +
Preference number: 4 (lower is better)
Translates to: KGHEMSLPPGTLASRLIFQLVSS*SNSLAI
Trigger: GATAGCTAATGAATTGGACCATGAGGAAACTAGCTG...GAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGAATTGCTGCGAGGGGGTTCCTGAATaGAACCTGGTTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: APWLQGSSSAYNLIKNCCEGVPE*NLVGHG
Trigger: CCCATGCCCAACCAGGTTCCATTCAGGAACCCCCTC...GCAGCAATTCTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACTGGGTCCAGATCCACTaGTATAAAAAGAAAAGCTTA +
Preference number: 4 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDWVQIH*YKKKSL
Trigger: TAAGCTTTTCTTTTTATACCAGTGGATCTGGACCCA...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGTCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSLRIE*EHSKWG
Trigger: TCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGA...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTTLRSS*SFRLRA
Trigger: GGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGT...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGTGGACAAAGTCTGCTTaGCCTGCCCTTTCAGAATCC +
Preference number: 4 (lower is better)
Translates to: FLPAPWLQGSSSAYNLIKWTKSA*PALSES
Trigger: GGATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCA...CTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000597275.5
CDS-3UTR TCA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTTCCTCTTGGCTGAGCTaGGCAAGACGCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPSSWLS*ARRMPR
Trigger: CCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGA...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGTCCCCAGCACAGTGTaGGAGAAGAAGCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTVPSTV*EKKQGV
Trigger: GACACCCTGCTTCTTCTCTCACACTGTGCTGGGGAC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR GCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACCGGACATCCCTGAGCTaGTCCTCTAGCTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHRTSLS*SSSSCS
Trigger: GCTGCATGAGCTAGAGGAGCAGCTCAGGGATGTCCG...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTGAGCTGCTCTCTGAGTaGAGAACTACGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAELLSE*RTTSSW
Trigger: CCAAGAGGACGTAGTTCTGCACTCAGAGAGCAGCTC...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTTCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAAT +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTSGSPG*RTTDEN
Trigger: ATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGA...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATTTGATAAAGAATTGCTaGTACCAGTGCCCAAGATCC +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNLIKNC*YQCPRS
Trigger: GGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAA...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGATTGATAAAGAATTGCTaGTACCAGTGCCCAAGATCC +
Preference number: 4 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRLIKNC*YQCPRS
Trigger: GGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAA...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACAACTTGATAAAGAATTaGTGCTACCAGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: TSHSLAWISSPSALRDPYNLIKN*CYQCPR
Trigger: TCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTT...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGAACTTGATAAAGAATTaGTGCTACCAGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLNLIKN*CYQCPR
Trigger: TCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTT...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACGCATCCCACCCAGACTaGAGTCCTTCCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHASHPD*SPSKCG
Trigger: CCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGC...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGATGTCTGGACCCACTTaGCCCTGGTACCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMMSGPT*PWYLGS
Trigger: GGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACAT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCAGCGTGTGGGGCTGGTaGGGCTGGCCACAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVSVWGW*GWPQSS
Trigger: GGAACTCTGTGGCCAGCCCCACCAGCCCCACACGCT...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTSHSLA*ISSPSA
Trigger: GGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCT...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTATGGAGGAAGGGGCTTaGGGTCCCCATGACATCATC +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSMEEGA*GPHDII
Trigger: GATGATGTCATGGGGACCCCAAGCCCCTTCCTCCAT...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCGTGGCTGATGGCTaGACAAAGTCTTGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSAVADG*TKSWFP
Trigger: AGGGAACCAAGACTTTGTCCAGCCATCAGCCACGGC...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTTGGACAAAGTCTGCTTaGCCTGCCCTTTCAGAATCC +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAWTKSA*PALSES
Trigger: GGATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCA...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR TCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGTCATGTGCAGTAGAGTaGCCCTGTGCCATCACAGCA +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSCAVE*PCAITA
Trigger: TGCTGTGATGGCACAGGGTCACTCTACTGCACATGA...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATTGCTCCTCTAGCTCATaGAGCCTCCTCAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHCSSSS*SLLSAS
Trigger: AGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCA...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTTGCTCCTCTAGCTCATaGAGCCTCCTCAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSCSSSS*SLLSAS
Trigger: AGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCA...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCTGTTGCTGCGGCGGGTaGGAGCTACGAAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVCCCGG*ELRRGR
Trigger: CCTCCCTCTTCGTAGCTCGCACCCGCCGCAGCAACA...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTAATTGCTGCTACCAGTaGCCAAGATCCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSNCCYQ*PRSPPP
Trigger: TGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATT...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTATGTCTGGACCCACTTaGCCCTGGTACCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTMSGPT*PWYLGS
Trigger: GGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACAT...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTTCCGAACAGGGCAGCTaGGGCATTGAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTSEQGS*GIEGRR
Trigger: TCTCCTACCTTCAATGCCCCAGCTGCCCTGTTCGGA...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATCAGCTAGTTTCCTCATaGTCCAATTCATTAGCTATC +
Preference number: 4 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNQLVSS*SNSLAI
Trigger: GATAGCTAATGAATTGGACCATGAGGAAACTAGCTG...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGGGAGAGCTGATCAGCTaGCCTTTGACTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMGELIS*PLTSIL
Trigger: CAAGATGGAAGTCAAAGGTCAGCTGATCAGCTCTCC...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGPGDTL*GAPEVS
Trigger: TGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTAAAGTCTGCTTGACCTaGCCTTTCAGAATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLAKVCLT*PFRIRV
Trigger: CACACGGATTCTGAAAGGGCAGGTCAAGCAGACTTT...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR GCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGAGCTGCTCTCTGAGTaGAGAACTACGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTELLSE*RTTSSW
Trigger: CCAAGAGGACGTAGTTCTGCACTCAGAGAGCAGCTC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATCTAATGCAGGTCATGTaGAGTAGAGTGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHLMQVM*SRVTLC
Trigger: GCACAGGGTCACTCTACTGCACATGACCTGCATTAG...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACTTTCAGAATCCGTGTaGATGTCTGGACCCACTTGG +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGLSESV*MSGPTW
Trigger: CCAAGTGGGTCCAGACATCCACACGGATTCTGAAAG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CCA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTTCCGAACAGGGCAGCTaGGGCATTGAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPSEQGS*GIEGRR
Trigger: TCTCCTACCTTCAATGCCCCAGCTGCCCTGTTCGGA...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCGATACTGCCCGCAGCTaGTCCCAAGCCTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVDTARS*SQALGG
Trigger: ACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATC...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCTGCATACACAGGTGGTaGGCCGGGGAGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVCIHRW*AGEHGE
Trigger: CTCACCATGCTCCCCGGCCCACCACCTGTGTATGCA...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCCAGCTAGTTTCCTCATaGTCCAATTCATTAGCTATC +
Preference number: 4 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSQLVSS*SNSLAI
Trigger: GATAGCTAATGAATTGGACCATGAGGAAACTAGCTG...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATAATCCCCTTCCAGTGTaGGTAATGTCTTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHNPLPV*VMSWVQ
Trigger: CTGGACCCAAGACATTACCCACACTGGAAGGGGATT...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR TCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTGGAGAGCTGATCAGCTaGCCTTTGACTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTGELIS*PLTSIL
Trigger: CAAGATGGAAGTCAAAGGTCAGCTGATCAGCTCTCC...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000597275.5
ENST00000606812.5
CDS-3UTR TCA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATATCCCCATAAAGATCTaGTGGAGGTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: PCAITAASFLMVQFISYHIPIKI*WRWFPW
Trigger: CCATGGAAACCACCTCCATCAGATCTTTATGGGGAT...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGAGTCCGCGTAGTATCTaGCAGAGACAGGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKSPRSI*QRQGAP
Trigger: CGGCGCCCCCTGTCTCTGGCAGATACTACGCGGACT...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACCTTGGAAGATTAGGTTaGCGCACTCTGCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHLGRLG*RTLLRT
Trigger: AGTCCTGAGCAGAGTGCGCCAACCTAATCTTCCAAG...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGTGTCAGACACCTTCCTaGGCCTACGGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKCQTPS*AYGEPG
Trigger: CCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACA...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGGTGGTGGATTGGGGCTaGGTGCAGTGGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKVVDWG*VQWLTA
Trigger: AGCCGTGAGCCACTGCACCCAGCCCCAATCCACCAC...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCAGAGAGAAGCAGCCATaGGGCTCCTCGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVREKQP*GSSLSW
Trigger: CCATGACAACGAGGAGCCCCATGGCTGCTTCTCTCT...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGGGAGAAGGCAGGGGTTaGTTGGGGGCGCTCATACAG +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKGEGRG*LGALIQ
Trigger: CTGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCC...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGTGCATACACAGGTGGTaGGCCGGGGAGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKCIHRW*AGEHGE
Trigger: CTCACCATGCTCCCCGGCCCACCACCTGTGTATGCA...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGCAGTCCTTCCAAGTGTaGGCAGAGAGCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKQSFQV*AESPLP
Trigger: GGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTG...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCTGGTTCCCTTCGCATTaGGTGAGAGCACAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVWFPSH*VRAQQV
Trigger: CACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCA...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGGAGGGAGCTGCTCTCTaGGTGCAGAACTACGTCCTC +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKEGAAL*VQNYVL
Trigger: GAGGACGTAGTTCTGCACTCAGAGAGCAGCTCCCTC...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR TCA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTGCCTGGCCAATATGGTaGAACCTTGTCTCTACTAAG +
Preference number: 4 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPAWPIW*NLVSTK
Trigger: CTTAGTAGAGACAAGGTTTCACCATATTGGCCAGGC...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGTTGATAAAGAATTGCTaGTACCAGTGCCCAAGATCC +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMLIKNC*YQCPRS
Trigger: GGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAA...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AAATCACAGACAGGTATCATAGAAAACACAACTTGTGTGGGTTTGCTTAAAAAGAGAGCCAGGTTCTTGTaGCCACTGCGTTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: KSQTGIIENTTCVGLLKKRARFL*PLRSPA
Trigger: GGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCT...CTTTTTAAGCAAACCCACACAAGTTGTGTTTTCTATGATACCTGTCTGTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCACTCTGAGAGGGAGCTaGTCTCTGAGTGCAGAACTA +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVTLRGS*SLSAEL
Trigger: TAGTTCTGCACTCAGAGAGCAGCTCCCTCTCAGAGT...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR GCA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAAACTTGATAAAGAATTaGTGCTACCAGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGNLIKN*CYQCPR
Trigger: TCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTT...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR GCA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGAACTTGATAAAGAATTaGTGCTACCAGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMNLIKN*CYQCPR
Trigger: TCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACATATGGTCCATTTTATaGAGGGGGTTCCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHIWSIL*RGFLNG
Trigger: TCCATTCAGGAACCCCCTCCATAAAATGGACCATAT...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CCA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTCAGCTAGTTTCCTCATaGTCCAATTCATTAGCTATC +
Preference number: 4 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTQLVSS*SNSLAI
Trigger: GATAGCTAATGAATTGGACCATGAGGAAACTAGCTG...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CCA 90 bp AGTTTACACATTTATTATACAAATCCCCTTCCAGTGTGGGTAATGTCTTGGGTCGTGTGGGTAATGTCTTaGGTCCAGATCCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: SLHIYYTNPLPVWVMSWVVWVMS*VQIHWY
Trigger: ATACCAGTGGATCTGGACCCAAGACATTACCCACAC...GACCCAAGACATTACCCACACTGGAAGGGGATTTGTATAATAAATGTGTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS CCA 90 bp GCTCGTCCCCGGGCGCGCGCCTGCTCCTCTTCGGCGCCCTGCCCGTaGGCCGTGTTCGGCTGCGCTACCGTTAGCCGTGGGGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: ARPRARACSSSAPCP*AVFGCATVSRGGQT
Trigger: CGTCTGGCCCCCACGGCTAACGGTAGCGCAGCCGAACACGGCCCACGGGCAGGGCGCCGAAGAGGAGCAGGCGCGCGCCCGGGGACGAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS-3UTR CAA 90 bp GCCCACGGAAGGGAGCACAGGCCGGCGCTGGGGCCCCGCAGCCAGTCCCGAGTTGAAGGCAGGGGTTGGTaGGGGGCGCTCATACAGCAC +
Preference number: 5 (lower is better)
Translates to: AHGREHRPALGPRSQSRVEGRGW*GALIQH
Trigger: GTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTTC...AACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS GCA 90 bp CGGAGGCAGGGTCCGCCCGGGGGAAGCCCATCTGGGAGTCCTGGCTaGCGGACCACTGACGAGAATGAAGGCCTTCAGGTCTGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: RRQGPPGGSPSGSPG*RTTDENEGLQVWGE
Trigger: CTCACCCCAGACCTGAAGGCCTTCATTCTCGTCAGTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620388.1
CDS TCA 90 bp GGCCAGGCCCTCACCGCCTCCTGGAGACACACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCCTCCTGCAGGGTCCGCTGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GQALTASWRHTLRSS*SFRLRASCRVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGTGAGGGCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS-3UTR CAA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAAAGCTGGTCCCAAGCCTaGGGTGGTGAGGGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQSWSQA*GGEGRS
Trigger: CGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCT...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS CCA 90 bp CAAGTGGGGAGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCAAGGGTCCCCGCGCCGCAGTA +
Preference number: 5 (lower is better)
Translates to: QVGSWADLQRLLRGP*VTATSLAKGPRAAV
Trigger: TACTGCGGCGCGGGGACCCTTGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS-3UTR CAA 90 bp CAGGCCACAGGGCTTAGTGCGGGTGGCACGGGTGTGGGGGTCCTTGGTGCGGAGGATGTCTGGACCCACTaGGCCCTGGTACCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: QATGLSAGGTGVGVLGAEDVWTH*ALVPWF
Trigger: GAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATC...CTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTAAGCCCTGTGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CAA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGCCATGGGGCTCCTCGTaGTCATGGCTGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKPWGSS*SWLAPD
Trigger: GTCTGGGGCCAGCCATGACAACGAGGAGCCCCATGG...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp AAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCCGGGTGTGGGGGTCCTaGGTGCGGAGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: KGHEMSLPPGTLASRLIFRVWGS*VRRRGL
Trigger: CAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCG...GAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp ACAGGGGGCGCCGTGAAACTCCTCGAGTGTGGGAGTGGCGCCTGGCTGGGGGCCCCTTGGAAGATTAGGTaGGCGCACTCTGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: TGGAVKLLECGSGAWLGAPWKIR*AHSAQD
Trigger: GTCCTGAGCAGAGTGCGCCAACCTAATCTTCCAAGG...GGCCCCCAGCCAGGCGCCACTCCCACACTCGAGGAGTTTCACGGCGCCCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS TCA 90 bp TGGCCAGTCAGCTCCGCCTCCTGGAGACACACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCCTCCTGCAGGGTCCGCTGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: WPVSSASWRHTLRSS*SFRLRASCRVRCRS
Trigger: TGACCGGCAGCGGACCCTGCAGGAGGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGACTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS GCA 90 bp GATACCCCTAGGGCCAGGCCCTCACCGCCTCCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCAGGCTCAGGGCCTCCTGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: DTPRARPSPPPGDTL*GAPEVSGSGPPAGS
Trigger: GGACCCTGCAGGAGGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGTGAGGGCCTGGCCCTAGGGGTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS CCA 90 bp GTCCGCTGCCGGTCAAGCAGCCCCCGCAGACGCTCTGACTTCACCTaGGGGGCAGCCTCTCCGAACAGGGCAGCTTTGACTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: VRCRSSSPRRRSDFT*GAASPNRAALTSIL
Trigger: CAAGATGGAAGTCAAAGCTGCCCTGTTCGGAGAGGCTGCCCCCCAGGTGAAGTCAGAGCGTCTGCGGGGGCTGCTTGACCGGCAGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000603906.1
CDS-3UTR CAA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCAGCTGGTCCCAAGCCTaGGGTGGTGAGGGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFSWSQA*GGEGRS
Trigger: CGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCT...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTAGGGCCTCAGAACTGTaGCTGCGGCGGGTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTRASEL*LRRVRA
Trigger: AGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCT...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCGGGTGTGGGGGTCCTaGGTGCGGAGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTRVWGS*VRRRGL
Trigger: CAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCG...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGTGGGCACAGAGGGGGTaGGGCTCTTTCAGGCATCCC +
Preference number: 5 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKWAQRG*GSFRHP
Trigger: GGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCA...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp ACAGCAAGGGGCATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCACCATGGGGCTCCTCGTaGTCATGGCTGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: TARGMRCPFLPAPWLQGSPWGSS*SWLAPD
Trigger: GTCTGGGGCCAGCCATGACAACGAGGAGCCCCATGG...TGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATGCCCCTTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGAGCTGGTCCCAAGCCTaGGGTGGTGAGGGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQSWSQA*GGEGRS
Trigger: CGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCT...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACAGGGCCTCAGAACTGTaGCTGCGGCGGGTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDRASEL*LRRVRA
Trigger: AGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCT...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp AAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGAGGAGAAGGCAGGGGTaGGTTGGGGGCGCTCATACA +
Preference number: 5 (lower is better)
Translates to: KQGVRHLPGPTGSQGPWKRRRQG*VGGAHT
Trigger: TGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCCT...CTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAGGAGAAGGCAGGGGTaGGTTGGGGGCGCTCATACA +
Preference number: 5 (lower is better)
Translates to: GPARSAVCSPDWNRAQANRRRQG*VGGAHT
Trigger: TGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCCT...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACATATCAGACGGGTGTGGGGGTCCTaGGTGCGGAGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AVCSPDWNRAQANKGHIRRVWGS*VRRRGL
Trigger: CAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCG...TCTGATATGTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GGGCAGAGAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTGTGTGCTCCCCAGATaGGAATCGTGCCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: GQRAHCPNCPGDAWQGFLCVLPR*ESCPGQ
Trigger: TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACA...CAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS CCA 90 bp CAAGTGGGGAGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCAATGCCAGAGAGTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QVGSWADLQRLLRGP*VTATSLANARECCG
Trigger: CCCACAGCACTCTCTGGCATTGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000603986.6
CDS-3UTR CAA 90 bp CCAGTCCCGCAGCCCCTCCAGAGCCAGGTTCTTGTGGCCACTGCGTTCACCAGCCTTGGCCCTGGTACCTaGGTTCCCTTCGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: PVPQPLQSQVLVATAFTSLGPGT*VPFALS
Trigger: ACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAG...GCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CAA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACAGCTGGTCCCAAGCCTaGGGTGGTGAGGGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: TSHSLAWISSPSALRDPYSWSQA*GGEGRS
Trigger: CGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCT...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACGAAGGCAGGGGTTGGTaGGGGGCGCTCATACAGCAC +
Preference number: 5 (lower is better)
Translates to: RGQLCAPQIGIVPRPTRDEGRGW*GALIQH
Trigger: GTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTTC...GTCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCCGGGTGTGGGGGTCCTaGGTGCGGAGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSRVWGS*VRRRGL
Trigger: CAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCG...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp GTTCTTGTGGCCACTGCGTTCACCAGCCGAGGGGATACGGGTGGGTGGGGGCATTGTGTGCTCCCCAGATaGGAATCGTGCCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: VLVATAFTSRGDTGGWGHCVLPR*ESCPGQ
Trigger: TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACA...ATGCCCCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CAA 90 bp ACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCCACTGCCCCAACTGCCTCCAGAGCCAGGTTCTaGTGGCCACTGCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: TQTAVLPSVGREPTAPTASRARF*WPLRSP
Trigger: TGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGA...GGCAGTTGGGGCAGTGGGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GAGGGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTCCAGAGCCAGGTTCTaGTGGCCACTGCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: EGPQSPAQCERRSRVSDTSRARF*WPLRSP
Trigger: TGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGA...GGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACCCGAACAGGGCAGCTTaGACTTCCATCTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GPARSAVCSPDWNRAQANPNRAA*TSILVL
Trigger: CAGCACCAAGATGGAAGTCAAAGCTGCCCTGTTCGG...GTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CAA 90 bp GGCTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGTGGGCACAGAGGGGGTaGGGCTCTTTCAGGCATCCC +
Preference number: 5 (lower is better)
Translates to: GSFRHPTQTAVLPSVGREWAQRG*GSFRHP
Trigger: GGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCA...CTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS TCA 90 bp TCTGGACCCACTTGGCCCTGGTACCTTGGTTCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGAGCTGGGCGGACTTACAACGCCTCC +
Preference number: 5 (lower is better)
Translates to: SGPTWPWYLGSLRIE*EHSKWGAGRTYNAS
Trigger: GGAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482476.1
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000603906.1
ENST00000603986.6
CDS CCA 90 bp CAAGTGGGGAGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCTGGGGAAGGAGAATTAATGGG +
Preference number: 5 (lower is better)
Translates to: QVGSWADLQRLLRGP*VTATSLAWGRRING
Trigger: CCCATTAATTCTCCTTCCCCAGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS-3UTR CAA 90 bp TCACCTGAGGATTTCACTGGCATCTACCGGGTGCCCCTCCTGTGGGGCCTCCTGCCTTTGACTTCCATCTaGGTGCTGTCGAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: SPEDFTGIYRVPLLWGLLPLTSI*VLSRGR
Trigger: ACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGG...CAGGAGGCCCCACAGGAGGGGCACCCGGTAGATGCCAGTGAAATCCTCAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GAGCCCACTGCCCCAACTGCCCTGGCGATGCGTGGCAGGGATTTCTGTTCACACCCTTTGACTTCCATCTaGGTGCTGTCGAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: EPTAPTALAMRGRDFCSHPLTSI*VLSRGR
Trigger: ACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGG...GTGTGAACAGAAATCCCTGCCACGCATCGCCAGGGCAGTTGGGGCAGTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp ACCTTCCTGGGCCTACGGGGAGCCAGGGGCCTTGGAAGATTAGGTTGGCGCACTCAGAACTACGTCCTCTaGGCTGAGCTGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: TFLGLRGARGLGRLGWRTQNYVL*AELSKT
Trigger: CGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTTCTG...AGTGCGCCAACCTAATCTTCCAAGGCCCCTGGCTCCCCGTAGGCCCAGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCAGCTGGTCCCAAGCCTaGGGTGGTGAGGGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSSWSQA*GGEGRS
Trigger: CGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCT...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATAGGGCCTCAGAACTGTaGCTGCGGCGGGTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNRASEL*LRRVRA
Trigger: AGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCT...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACGAAGGCAGGGGTTGGTaGGGGGCGCTCATACAGCAC +
Preference number: 5 (lower is better)
Translates to: TSHSLAWISSPSALRDPYEGRGW*GALIQH
Trigger: GTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTTC...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCTCCACAGCAGAGGGTTaGGATGCACCTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFSTAEG*DAPQGL
Trigger: AAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGA...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAATCCAGAGCCAGGTTCTaGTGGCCACTGCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQSRARF*WPLRSP
Trigger: TGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGA...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGATGTGTGCTCCCCAGATaGGAATCGTGCCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: ARSAVCSPDWNRAQANKGCVLPR*ESCPGQ
Trigger: TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACA...TCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCCCTTGGAAGATTAGGTaGGCGCACTCTGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: GEWPVARRQTSPEDFTGIPWKIR*AHSAQD
Trigger: GTCCTGAGCAGAGTGCGCCAACCTAATCTTCCAAGG...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAATTGGTTCCCTTCGCATaGAGTGAGAGCACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQLVPFA*SESTAS
Trigger: ACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAA...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GGCCCCCAGTCCCCAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTTGGCCCTGGTACCTaGGTTCCCTTCGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: GPQSPAQCERRSRVSDTFLGPGT*VPFALS
Trigger: ACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAG...GAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTGGGGACTGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000603986.6
CDS-3UTR CAA 90 bp CAGCACAGTGTGAGAGAAGAAGCAGGGTGTCAGACACCTTCCTGGGCCTACGGGGATGTCTGGACCCACTaGGCCCTGGTACCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: QHSVREEAGCQTPSWAYGDVWTH*ALVPWF
Trigger: GAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATC...CCCGTAGGCCCAGGAAGGTGTCTGACACCCTGCTTCTTCTCTCACACTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603906.1
ENST00000603986.6
CDS-3UTR CAA 90 bp GGGCCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACTGGACAAAGTCTGCTaGACCTGCCCTTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: GPSEVSCVLPRLESCPGQLDKVC*TCPFRI
Trigger: GATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCAG...TTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CAA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGCTTTGACTTCCATCTaGGTGCTGTCGAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQALTSI*VLSRGR
Trigger: ACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGC...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603906.1
CDS-3UTR CAA 90 bp GCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAAGGGACCTTGGAAGATTAGGTaGGCGCACTCTGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: ARSAVCSPDWNRAQANKGPWKIR*AHSAQD
Trigger: GTCCTGAGCAGAGTGCGCCAACCTAATCTTCCAAGG...TCCCTTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603906.1
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp GGTGAGTGGCCCGTGGCCCGTAGGCAGACCTCACCTGAGGATTTCACTGGCATCTTAAAAAGTGGTGGATaGGGGCTGGGTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GEWPVARRQTSPEDFTGILKSGG*GLGAVA
Trigger: AGCCACTGCACCCAGCCCCAATCCACCACTTTTTAA...GATGCCAGTGAAATCCTCAGGTGAGGTCTGCCTACGGGCCACGGGCCACTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS CCA 90 bp CAAGTGGGGAGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCTCAAAAATAGTTGTCTCGACC +
Preference number: 5 (lower is better)
Translates to: QVGSWADLQRLLRGP*VTATSLASKIVVST
Trigger: GGTCGAGACAACTATTTTTGAGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCTCCCCACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000603906.1
ENST00000606812.5
CDS-3UTR CAA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCGATGTCTGGACCCACTaGGCCCTGGTACCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTDVWTH*ALVPWF
Trigger: GAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATC...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp TCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTGAGACCCGATATGGTCCACAGAACTACGTCCTCTaGGCTGAGCTGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: SHRSLLAALNGPETRYGPQNYVL*AELSKT
Trigger: CGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTTCTG...TGGACCATATCGGGTCTCAGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCGAAGGCAGGGGTTGGTaGGGGGCGCTCATACAGCAC +
Preference number: 5 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSEGRGW*GALIQH
Trigger: GTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTTC...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACTCCAGAGCCAGGTTCTaGTGGCCACTGCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: TSHSLAWISSPSALRDPYSRARF*WPLRSP
Trigger: TGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGA...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CCCAGCGAGGTCAGCTGTGTGCTCCCCAGATTGGAATCGTGCCCAGGCCAACAATTAAAAAGTGGTGGATaGGGGCTGGGTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PSEVSCVLPRLESCPGQQLKSGG*GLGAVA
Trigger: AGCCACTGCACCCAGCCCCAATCCACCACTTTTTAA...TTGTTGGCCTGGGCACGATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp TCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTTGGCCCTGGTACCTaGGTTCCCTTCGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: SPPPGPHGLMQVMCSRVTLGPGT*VPFALS
Trigger: ACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAG...GGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACCAGAACTACGTCCTCTaGGCTGAGCTGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: TSHSLAWISSPSALRDPYQNYVL*AELSKT
Trigger: CGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTTCTG...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CGCGTAGTATCTTTAGAAGGGGTAGCAGGAATCCGGAGGACAGGGCGGGGAAGACAGAACTACGTCCTCTaGGCTGAGCTGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: RVVSLEGVAGIRRTGRGRQNYVL*AELSKT
Trigger: CGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTTCTG...TCTTCCCCGCCCTGTCCTCCGGATTCCTGCTACCCCTTCTAAAGATACTACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CAA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTCGGGTGTGGGGGTCCTaGGTGCGGAGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTRVWGS*VRRRGL
Trigger: CAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCG...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGATCCACAGCAGAGGGTTaGGATGCACCTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: PRSPPPGPHGLMQVMCSRSTAEG*DAPQGL
Trigger: AAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGA...TCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp ACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTGCCTTACGAGACCCCTACTCACAGCCACGAGTCTaGCCAATGCCAGAGAGTGCT +
Preference number: 5 (lower is better)
Translates to: TSHSLAWISSPSALRDPYSQPRV*PMPESA
Trigger: AGCACTCTCTGGCATTGGCAAGACTCGTGGCTGTGA...GTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536628.3
CDS GCA 90 bp GGCGAGGGTCATGGGAATAGGGTCAGAAAAATCAGGCAGAAGGCGTaGAGTGCCCTCCCTACCCCAGCCCTTTCTAAGCCTTCACTTTCA +
Preference number: 5 (lower is better)
Translates to: GEGHGNRVRKIRQKA*SALPTPALSKPSLS
Trigger: TGAAAGTGAAGGCTTAGAAAGGGCTGGGGTAGGGAGGGCACTGCACGCCTTCTGCCTGATTTTTCTGACCCTATTCCCATGACCCTCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620388.1
CDS CCA 90 bp GATCAGCTGACCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCTGGCAGTGACACAAAGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: DQLTFDFHLGAVERP*LMAGQSLAVTQRSR
Trigger: ACGGCTCCTTTGTGTCACTGCCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGGTCAGCTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS-3UTR CAA 90 bp TGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCTTGGTTCCCTTCGCATaGAGTGAGAGCACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: CYQCPRSPPPGPHGLMQVLVPFA*SESTAS
Trigger: ACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAA...GACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CTCTTTCAGGCATCCCACCCAGACTGCAGTCCTTCCAAGTGTGGGCAGAGAGCCTTGGTTCCCTTCGCATaGAGTGAGAGCACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: LFQASHPDCSPSKCGQRALVPFA*SESTAS
Trigger: ACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAA...GGCTCTCTGCCCACACTTGGAAGGACTGCAGTCTGGGTGGGATGCCTGAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTCTTGGCCCTGGTACCTaGGTTCCCTTCGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTLGPGT*VPFALS
Trigger: ACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAG...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp GAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATCCTTTGACTTCCATCTaGGTGCTGTCGAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: ELLLPVPKIPSTRTPWTNPLTSI*VLSRGR
Trigger: ACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGG...ATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGGTCTGGACAAAGTCTGCTaGACCTGCCCTTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: LLPVPKIPSTRTPWTNAGLDKVC*TCPFRI
Trigger: GATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCAG...ACCTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp TGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTAATGCAGCTGGACAAAGTCTGCTaGACCTGCCCTTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: CCYQCPRSPPPGPHGLMQLDKVC*TCPFRI
Trigger: GATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCAG...CTGCATTAGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTCGGGTGTGGGGGTCCTaGGTGCGGAGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPRVWGS*VRRRGL
Trigger: CAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCG...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp CATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTGCCATCACAGCAGCTCCACAGCAGAGGGTTaGGATGCACCTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: HGLMQVMCSRVTLCHHSSSTAEG*DAPQGL
Trigger: AAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGA...GCTGCTGTGATGGCACAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATATCCAGAGCCAGGTTCTaGTGGCCACTGCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: PFLPAPWLQGSSSAYNLISRARF*WPLRSP
Trigger: TGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGA...TATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTGCTTTGACTTCCATCTaGGTGCTGTCGAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTALTSI*VLSRGR
Trigger: ACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGC...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536628.3
CDS-3UTR CAA 90 bp AGAGGCCATGGGCACAGAGGGGGTTGGGCTCTTTCAGGCATCCCACCCAGACTGGTAAAACGCCTAGTGTaGGAGGAAGACAGTGAATAC +
Preference number: 5 (lower is better)
Translates to: RGHGHRGGWALSGIPPRLVKRLV*EEDSEY
Trigger: GTATTCACTGTCTTCCTCCAACACTAGGCGTTTTAC...CAGTCTGGGTGGGATGCCTGAAAGAGCCCAACCCCCTCTGTGCCCATGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp CGTGGCAGGGATTTCTGTTCACACCGGAGTCTCCTGGCTGCCCTAAATGGCCCTAGTGTGGGTAATGTCTaGGGTCCAGATCCACTGGTA +
Preference number: 5 (lower is better)
Translates to: RGRDFCSHRSLLAALNGPSVGNV*GPDPLV
Trigger: TACCAGTGGATCTGGACCCAAGACATTACCCACACT...AGGGCCATTTAGGGCAGCCAGGAGACTCCGGTGTGAACAGAAATCCCTGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS CCA 90 bp GAACAGGGCAGCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCTGCTTGACCTGCCCTTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: EQGSFDFHLGAVERP*LMAGQSLLDLPFQN
Trigger: ATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGCTGCCCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000603906.1
CDS-3UTR CAA 90 bp CCTCCACCAGGACCCCATGGACTAATGCAGGTCATGTGCAGTAGAGTGACCCTGTTGGTTCCCTTCGCATaGAGTGAGAGCACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: PPPGPHGLMQVMCSRVTLLVPFA*SESTAS
Trigger: ACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAA...CAGGGTCACTCTACTGCACATGACCTGCATTAGTCCATGGGGTCCTGGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CATGAGATGTCCCTTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATTGGTTCCCTTCGCATaGAGTGAGAGCACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: HEMSLPPGTLASRLIFSLLVPFA*SESTAS
Trigger: ACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAA...TAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAAGGGACATCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGCCATGGGGCTCCTCGTaGTCATGGCTGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMPWGSS*SWLAPD
Trigger: GTCTGGGGCCAGCCATGACAACGAGGAGCCCCATGG...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATCCATGGGGCTCCTCGTaGTCATGGCTGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PCAITAASFLMVQFISYHPWGSS*SWLAPD
Trigger: GTCTGGGGCCAGCCATGACAACGAGGAGCCCCATGG...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCATGGGGCTCCTCGTaGTCATGGCTGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGPWGSS*SWLAPD
Trigger: GTCTGGGGCCAGCCATGACAACGAGGAGCCCCATGG...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAAGGGCCTCAGAACTGTaGCTGCGGCGGGTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGRASEL*LRRVRA
Trigger: AGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCT...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTAGGGCCTCAGAACTGTaGCTGCGGCGGGTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSRASEL*LRRVRA
Trigger: AGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCT...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS CCA 90 bp GATCAGCTGACCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCTGCTTGACCTGCCCTTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: DQLTFDFHLGAVERP*LMAGQSLLDLPFQN
Trigger: ATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGGTCAGCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496529.6
ENST00000597275.5
CDS CCA 90 bp GATCAGCTGACCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCCTTTCAGAATCCGTGTGGATGTC +
Preference number: 5 (lower is better)
Translates to: DQLTFDFHLGAVERP*LMAGQSPFRIRVDV
Trigger: GACATCCACACGGATTCTGAAAGGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGGTCAGCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CAA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTAGCTGGTCCCAAGCCTaGGGTGGTGAGGGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPSWSQA*GGEGRS
Trigger: CGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCT...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603986.6
ENST00000606812.5
CDS-3UTR CAA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGAAGGCAGGGGTTGGTaGGGGGCGCTCATACAGCAC +
Preference number: 5 (lower is better)
Translates to: PCAITAASFLMVQFISYHEGRGW*GALIQH
Trigger: GTGCTGTATGAGCGCCCCCAACCAACCCCTGCCTTC...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp TTCCTCCCGGCACCCTGGCTTCAAGGCTCATCTTCAGCCTATAACTTGATAAAGTCCACAGCAGAGGGTTaGGATGCACCTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: FLPAPWLQGSSSAYNLIKSTAEG*DAPQGL
Trigger: AAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGA...CTTTATCAAGTTATAGGCTGAAGATGAGCCTTGAAGCCAGGGTGCCGGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp AAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGACCCCATGGACTTGGCTGGACAAAGTCTaGGTTCCCTTCGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: KELLLPVPKIPSTRTPWTWLDKV*VPFALS
Trigger: ACTCAATGCGAAGGGAACCAAGACTTTGTCCAGCCA...AGTCCATGGGGTCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS CCA 90 bp CAACGCCTCCTCAGAGGCCCATGGGTCACAGCCACGAGTCTTGCCTaGGGAAGGAGAATTAATGGGACAGATTCAACCAACTATAACAAC +
Preference number: 5 (lower is better)
Translates to: QRLLRGPWVTATSLA*GRRINGTDSTNYNN
Trigger: GTTGTTATAGTTGGTTGAATCTGTCCCATTAATTCTCCTTCCCCAGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS-3UTR CAA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTGATGTCTGGACCCACTaGGCCCTGGTACCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLADVWTH*ALVPWF
Trigger: GAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATC...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGAGGAGAAGGCAGGGGTaGGTTGGGGGCGCTCATACA +
Preference number: 5 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMRRRQG*VGGAHT
Trigger: TGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCCT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp TATAACTTGATAAAGAATTGCTGCTACCAGTGCCCAAGATCCCCTCCACCAGGAAGGAGAAGGCAGGGGTaGGTTGGGGGCGCTCATACA +
Preference number: 5 (lower is better)
Translates to: YNLIKNCCYQCPRSPPPGRRRQG*VGGAHT
Trigger: TGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCCT...TCCTGGTGGAGGGGATCTTGGGCACTGGTAGCAGCAATTCTTTATCAAGTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CGCGTAGTATCTTTAGAAGGGGTAGCAGGAATCCGGAGGACAGGGCGGGGAAGAGTAAAACGCCTAGTGTaGGAGGAAGACAGTGAATAC +
Preference number: 5 (lower is better)
Translates to: RVVSLEGVAGIRRTGRGRVKRLV*EEDSEY
Trigger: GTATTCACTGTCTTCCTCCAACACTAGGCGTTTTAC...TCTTCCCCGCCCTGTCCTCCGGATTCCTGCTACCCCTTCTAAAGATACTACGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CAA 90 bp AGTGACCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTCTTGGCCCTGGTACCTaGGTTCCCTTCGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: SDPVPSQQLVSSWSNSLALGPGT*VPFALS
Trigger: ACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAG...AGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGATGTCTGGACCCACTaGGCCCTGGTACCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: PCAITAASFLMVQFISYHDVWTH*ALVPWF
Trigger: GAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATC...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS-3UTR CAA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACAGGAGAAGGCAGGGGTaGGTTGGGGGCGCTCATACA +
Preference number: 5 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHRRRQG*VGGAHT
Trigger: TGTATGAGCGCCCCCAACCAACCCCTGCCTTCTCCT...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTTCCACAGCAGAGGGTTaGGATGCACCTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSSTAEG*DAPQGL
Trigger: AAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGA...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTTCCAGAGCCAGGTTCTaGTGGCCACTGCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSSRARF*WPLRSP
Trigger: TGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGA...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS CCA 90 bp TCATGGTCCAATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTaGATATCTTCGCCATCTGCCTTACGAGACCCCTACCCATCAGTA +
Preference number: 5 (lower is better)
Translates to: SWSNSLAIMTSHSLA*ISSPSALRDPYPSV
Trigger: TACTGATGGGTAGGGGTCTCGTAAGGCAGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATTGGACCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
ENST00000620388.1
CDS-3UTR CAA 90 bp AATTCATTAGCTATCATGACTAGCCACTCCCTGGCCTGGATATCTTCGCCATCTCAGAACTACGTCCTCTaGGCTGAGCTGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: NSLAIMTSHSLAWISSPSQNYVL*AELSKT
Trigger: CGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTTCTG...AGATGGCGAAGATATCCAGGCCAGGGAGTGGCTAGTCATGATAGCTAATGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp CCCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATCCGAACAGGGCAGCTTaGACTTCCATCTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PCAITAASFLMVQFISYHPNRAA*TSILVL
Trigger: CAGCACCAAGATGGAAGTCAAAGCTGCCCTGTTCGG...ATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536628.3
CDS-3UTR CAA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTCCTTTGACTTCCATCTaGGTGCTGTCGAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTPLTSI*VLSRGR
Trigger: ACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGG...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000597275.5
ENST00000606812.5
CDS-3UTR CAA 90 bp TCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTAGCCACCAGAACTACGTCCTCTaGGCTGAGCTGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: SQQLVSSWSNSLAIMTSHQNYVL*AELSKT
Trigger: CGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTTCTG...GTGGCTAGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000606812.5
CDS TCA 90 bp CTCACATGTAAAACCCTGCCTGAATTCTCTATCCGACCATACGTATaGACCACCCAAAGCTACCATCCCAACAGCCACCGTTCACAGAAT +
Preference number: 5 (lower is better)
Translates to: LTCKTLPEFSIRPYV*TTQSYHPNSHRSQN
Trigger: ATTCTGTGAACGGTGGCTGTTGGGATGGTAGCTTTGGGTGGTTCATACGTATGGTCGGATAGAGAATTCAGGCAGGGTTTTACATGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620388.1
CDS-3UTR CAA 90 bp AACAGGAATGAACCCAACCAGATGAGATCACAGTTTCCCTTTTGTAAAACGCCTTCACAGCCACGAGTCTaGCCAATGCCAGAGAGTGCT +
Preference number: 5 (lower is better)
Translates to: NRNEPNQMRSQFPFCKTPSQPRV*PMPESA
Trigger: AGCACTCTCTGGCATTGGCAAGACTCGTGGCTGTGA...AGGCGTTTTACAAAAGGGAAACTGTGATCTCATCTGGTTGGGTTCATTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS-3UTR CAA 90 bp CCTGTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGAGTGTGGGTAATGTCTaGGGTCCAGATCCACTGGTA +
Preference number: 5 (lower is better)
Translates to: PVPSQQLVSSWSNSLAIMSVGNV*GPDPLV
Trigger: TACCAGTGGATCTGGACCCAAGACATTACCCACACT...CATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS-3UTR CAA 90 bp GTGCCATCACAGCAGCTAGTTTCCTCATGGTCCAATTCATTAGCTATCATGACTCTGGACAAAGTCTGCTaGACCTGCCCTTTCAGAATC +
Preference number: 5 (lower is better)
Translates to: VPSQQLVSSWSNSLAIMTLDKVC*TCPFRI
Trigger: GATTCTGAAAGGGCAGGTCAAGCAGACTTTGTCCAG...AGTCATGATAGCTAATGAATTGGACCATGAGGAAACTAGCTGCTGTGATGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
CDS CCA 90 bp AAGAGGACAGTGGTTAAAAGCATGGACTCTAGAGTAAAACTTGCCTaGGCTCAAACTCCAGGACTTCAGTTTACTAACAAGTTACTTAAC +
Preference number: 5 (lower is better)
Translates to: KRTVVKSMDSRVKLA*AQTPGLQFTNKLLN
Trigger: GTTAAGTAACTTGTTAGTAAACTGAAGTCCTGGAGTTTGAGCCCAGGCAAGTTTTACTCTAGAGTCCATGCTTTTAACCACTGTCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620388.1
CDS GCA 72 bp CCCTCACTGCGCCCTGCTCGTCCCCGGGCGCGCGCCTaGTCCTCTTCGGCGCCCTGCCCGTGGGCCGTGTTC +
Preference number: 6 (lower is better)
Translates to: PSLRPARPRARA*SSSAPCPWAVF
Trigger: GAACACGGCCCACGGGCAGGGCGCCGAAGAGGAGCAGGCGCGCGCCCGGGGACGAGCAGGGCGCAGTGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS GCA 72 bp TCCTCTTCGGCGCCCTGCCCGTGGGCCGTGTTCGGCTaGGCTACCGTTAGCCGTGGGGGCCAGACGGGGGTC +
Preference number: 6 (lower is better)
Translates to: SSSAPCPWAVFG*ATVSRGGQTGV
Trigger: GACCCCCGTCTGGCCCCCACGGCTAACGGTAGCGCAGCCGAACACGGCCCACGGGCAGGGCGCCGAAGAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS CCA 72 bp CGGTCAAGCAGCCCCCGCAGACGCTCTGACTTCACCTaGGGGGCAGCCTCTCCGAACAGGGCAGCTTTGACT +
Preference number: 6 (lower is better)
Translates to: RSSSPRRRSDFT*GAASPNRAALT
Trigger: AGTCAAAGCTGCCCTGTTCGGAGAGGCTGCCCCCCAGGTGAAGTCAGAGCGTCTGCGGGGGCTGCTTGACCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000603906.1
CDS CCA 72 bp AGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCAAGGGTCCCCGC +
Preference number: 6 (lower is better)
Translates to: SWADLQRLLRGP*VTATSLAKGPR
Trigger: GCGGGGACCCTTGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597275.5
CDS TCA 72 bp CTCACCGCCTCCTGGAGACACACTTTGCGGAGCTCCTaGAGTTTCAGGCTCAGGGCCTCCTGCAGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: LTASWRHTLRSS*SFRLRASCRVR
Trigger: GCGGACCCTGCAGGAGGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS GCA 72 bp AGGGCCAGGCCCTCACCGCCTCCTGGAGACACACTTTaGGGAGCTCCTGAAGTTTCAGGCTCAGGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: RARPSPPPGDTL*GAPEVSGSGPP
Trigger: AGGAGGCCCTGAGCCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGTGAGGGCCTGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS CCA 72 bp AGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCTGGGGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: SWADLQRLLRGP*VTATSLAWGRR
Trigger: TCTCCTTCCCCAGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS CCA 72 bp AGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCAATGCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SWADLQRLLRGP*VTATSLANARE
Trigger: CTCTCTGGCATTGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000603986.6
CDS TCA 72 bp ACTTGGCCCTGGTACCTTGGTTCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGAGCTGGGCGGACTTAC +
Preference number: 6 (lower is better)
Translates to: TWPWYLGSLRIE*EHSKWGAGRTY
Trigger: GTAAGTCCGCCCAGCTCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482476.1
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000603906.1
ENST00000603986.6
CDS CCA 72 bp TGCTTGACCTGCCCTTTCAGAATCCGTGTGGATGTCTaGACCCACTTGGCCCTGGTACCTTGGTTCCCTTCG +
Preference number: 6 (lower is better)
Translates to: CLTCPFRIRVDV*THLALVPWFPS
Trigger: CGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATCCACACGGATTCTGAAAGGGCAGGTCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000482476.1
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000603906.1
CDS CCA 72 bp CCATCTTGGTGCTGTCGAGAGGCCGTGGCTGATGGCTaGACAAAGTCTGGCAGTGACACAAAGGAGCCGTTA +
Preference number: 6 (lower is better)
Translates to: PSWCCREAVADG*TKSGSDTKEPL
Trigger: TAACGGCTCCTTTGTGTCACTGCCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS CCA 72 bp ACCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCTGCTTGACCTGCCC +
Preference number: 6 (lower is better)
Translates to: TFDFHLGAVERP*LMAGQSLLDLP
Trigger: GGGCAGGTCAAGCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496529.6
ENST00000597275.5
CDS CCA 72 bp AGCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCTGCTTGACCTGCCC +
Preference number: 6 (lower is better)
Translates to: SFDFHLGAVERP*LMAGQSLLDLP
Trigger: GGGCAGGTCAAGCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000603906.1
CDS CAA 72 bp CCGTGTGGATGTCTGGACCCACTTGGCCCTGGTACCTaGGTTCCCTTCGCATTGAGTGAGAGCACAGCAAGT +
Preference number: 6 (lower is better)
Translates to: PCGCLDPLGPGT*VPFALSESTAS
Trigger: ACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATCCACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482476.1
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000603906.1
ENST00000603986.6
CDS CAA 90 bp TTTCAGAATCCGTGTGGATGTCTGGACCCACTTGGCCCTGGTACCTaGGTTCCCTTCGCATTGAGTGAGAGCACAGCAAGTGGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: FQNPCGCLDPLGPGT*VPFALSESTASGEL
Trigger: CAGCTCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATCCACACGGATTCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482476.1
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000603906.1
ENST00000603986.6
CDS TCA 72 bp TTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCTGCTTGACCTGCCCTTTC +
Preference number: 6 (lower is better)
Translates to: LTSILVLSRGRG*WLDKVCLTCPF
Trigger: GAAAGGGCAGGTCAAGCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496529.6
ENST00000536628.3
ENST00000597275.5
ENST00000603906.1
CDS TCA 72 bp ATGGCTGGACAAAGTCTTGGTTCCCTTCGCATTGAGTaGGAGCACAGCAAGTGGGGAGCTGGGCGGACTTAC +
Preference number: 6 (lower is better)
Translates to: MAGQSLGSLRIE*EHSKWGAGRTY
Trigger: GTAAGTCCGCCCAGCTCCCCACTTGCTGTGCTCTCACTCAATGCGAAGGGAACCAAGACTTTGTCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS CCA 72 bp AGCTGGGCGGACTTACAACGCCTCCTCAGAGGCCCATaGGTCACAGCCACGAGTCTTGCCTCAAAAATAGTT +
Preference number: 6 (lower is better)
Translates to: SWADLQRLLRGP*VTATSLASKIV
Trigger: AACTATTTTTGAGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGCGTTGTAAGTCCGCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000496529.6
ENST00000603906.1
ENST00000606812.5
CDS CCA 72 bp GCTGGACAAAGTCCTTTCAGAATCCGTGTGGATGTCTaGACCCACTTGGCCCTGGTACCTTGGTTCCCTTCG +
Preference number: 6 (lower is better)
Translates to: AGQSPFRIRVDV*THLALVPWFPS
Trigger: CGAAGGGAACCAAGGTACCAGGGCCAAGTGGGTCCAGACATCCACACGGATTCTGAAAGGACTTTGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS CCA 72 bp ACCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCTTGGTTCCCTTCGC +
Preference number: 6 (lower is better)
Translates to: TFDFHLGAVERP*LMAGQSLGSLR
Trigger: GCGAAGGGAACCAAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS CAA 72 bp GCCTCCTCAGAGGCCCATGGGTCACAGCCACGAGTCTaGCCTGGGGAAGGAGAATTAATGGGACAGATTCAA +
Preference number: 6 (lower is better)
Translates to: ASSEAHGSQPRV*PGEGELMGQIQ
Trigger: TTGAATCTGTCCCATTAATTCTCCTTCCCCAGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS TCA 72 bp TTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCCTTTCAGAATCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: LTSILVLSRGRG*WLDKVLSESVW
Trigger: CCACACGGATTCTGAAAGGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS TCA 72 bp TTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTGGCTaGTGGCTGGACAAAGTCTTGGTTCCCTTCGCATTG +
Preference number: 6 (lower is better)
Translates to: LTSILVLSRGRG*WLDKVLVPFAL
Trigger: CAATGCGAAGGGAACCAAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606812.5
CDS CCA 72 bp CTCAGAGGCCCATGGGTCACAGCCACGAGTCTTGCCTaGGGAAGGAGAATTAATGGGACAGATTCAACCAAC +
Preference number: 6 (lower is better)
Translates to: LRGPWVTATSLA*GRRINGTDSTN
Trigger: GTTGGTTGAATCTGTCCCATTAATTCTCCTTCCCCAGGCAAGACTCGTGGCTGTGACCCATGGGCCTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS CCA 72 bp ACCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCTGGCAGTGACACAA +
Preference number: 6 (lower is better)
Translates to: TFDFHLGAVERP*LMAGQSLAVTQ
Trigger: TTGTGTCACTGCCAGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482476.1
CDS CCA 72 bp ACCTTTGACTTCCATCTTGGTGCTGTCGAGAGGCCGTaGCTGATGGCTGGACAAAGTCCTTTCAGAATCCGT +
Preference number: 6 (lower is better)
Translates to: TFDFHLGAVERP*LMAGQSPFRIR
Trigger: ACGGATTCTGAAAGGACTTTGTCCAGCCATCAGCCACGGCCTCTCGACAGCACCAAGATGGAAGTCAAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603986.6
CDS GCA 72 bp TGGGTCACAGCCACGAGTCTTGCCAATGCCAGAGAGTaGTGTGGGGTAGCCTCAGATACCTCAAAAATAGTT +
Preference number: 6 (lower is better)
Translates to: WVTATSLANARE*CGVASDTSKIV
Trigger: AACTATTTTTGAGGTATCTGAGGCTACCCCACAGCACTCTCTGGCATTGGCAAGACTCGTGGCTGTGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536628.3
ENST00000603986.6
CDS TCA 72 bp AAAACCCTGCCTGAATTCTCTATCCGACCATACGTATaGACCACCCAAAGCTACCATCCCAACAGCCACCGT +
Preference number: 6 (lower is better)
Translates to: KTLPEFSIRPYV*TTQSYHPNSHR
Trigger: ACGGTGGCTGTTGGGATGGTAGCTTTGGGTGGTTCATACGTATGGTCGGATAGAGAATTCAGGCAGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620388.1
CDS CAA 72 bp AAGCCTTCACTTTCACATCTCCAAATGGGCCCAAGGTaGGAAGCTGTGTGTATAAAGGTGGCAGGTAGTGAC +
Preference number: 6 (lower is better)
Translates to: KPSLSHLQMGPR*EAVCIKVAGSD
Trigger: GTCACTACCTGCCACCTTTATACACACAGCTTCCAACCTTGGGCCCATTTGGAGATGTGAAAGTGAAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620388.1
CDS CCA 72 bp GTGGTTAAAAGCATGGACTCTAGAGTAAAACTTGCCTaGGCTCAAACTCCAGGACTTCAGTTTACTAACAAG +
Preference number: 6 (lower is better)
Translates to: VVKSMDSRVKLA*AQTPGLQFTNK
Trigger: CTTGTTAGTAAACTGAAGTCCTGGAGTTTGAGCCCAGGCAAGTTTTACTCTAGAGTCCATGCTTTTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620388.1