Pregenerated sensors for CCDC12 (Homo sapiens)
Ensembl gene IDs: ENSG00000160799Ensembl transcript IDs: ENST00000292314.6, ENST00000425441.5, ENST00000446836.5, ENST00000460035.1, ENST00000488069.5, ENST00000492819.1, ENST00000494655.5, ENST00000603885.5, ENST00000604164.5, ENST00000604181.1, ENST00000604367.1, ENST00000605358.5, ENST00000605875.1, ENST00000683445.1
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTACATCCACATGTGCAGACACAGGCACGCCCAGAGTTGTTGCTaGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAA | + |
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Preference number: 1 (lower is better) Translates to: MYIHMCRHRHAQSCC*FCLHSEWQGPPSRQ Trigger: TTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTCTGCACATGTGGATGTACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAAGACCATCCTCTaGAGGACAGGCCTGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: RHAQSCCWFCLHSEWQGPPKTIL*RTGLMG Trigger: GCCCATCAGGCCTGTCCTGCAGAGGATGGTCTTGGG...TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTCCCAAGACCATCCTCTaGAGGACAGGCCTGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: QGADLIHGGFRLDGQGVSPKTIL*RTGLMG Trigger: GCCCATCAGGCCTGTCCTGCAGAGGATGGTCTTGGG...AGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| 3UTR-3UTR TCA 90 bp | GACACAGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGCAGCAGACAAGGAGCTaGCCTCATCCATGGGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: DTGTPRVVAGSASIQNGRQQTRS*PHPWGF Trigger: AAACCCCCATGGATGAGGTCAGCTCCTTGTCTGCTG...CCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| 3UTR CCA 72 bp | CACATGTGCAGACACAGGCACGCCCAGAGTTGTTGCTaGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCC | + |
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Preference number: 3 (lower is better) Translates to: HMCRHRHAQSCC*FCLHSEWQGPP Trigger: GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTCTGCACATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| 3UTR GCA 72 bp | ATCCACATGTGCAGACACAGGCACGCCCAGAGTTGTTaGTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: IHMCRHRHAQSC*WFCLHSEWQGP Trigger: TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTCTGCACATGTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR TCA 90 bp | AAGACCATCCTCTGCAGGACAGGCCTGATGGGCGAGTGGTGGGGCAGGGCATGCGGTCCACCTCCTCGATaGCGGGCTCGGGCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: KTILCRTGLMGEWWGRACGPPPR*RARAWR Trigger: CCGCCAAGCCCGAGCCCGTCATCGAGGAGGTGGACC...GCATGCCCTGCCCCACCACTCGCCCATCAGGCCTGTCCTGCAGAGGATGGTCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGGAGCTGGTCCACCTCCTCGATaGCGGGCTCGGGCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CWFCLHSEWQGPPSRQGAGPPPR*RARAWR Trigger: CCGCCAAGCCCGAGCCCGTCATCGAGGAGGTGGACC...AGCTCCTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR TCA 90 bp | AAGACCATCCTCTGCAGGACAGGCCTGATGGGCGAGTGGTGGGGCAGGGCATGCTGGGGGTTTCAGACTTaGTGGGCAGGGAGTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KTILCRTGLMGEWWGRACWGFQT*WAGSLC Trigger: GCAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCA...GCATGCCCTGCCCCACCACTCGCCCATCAGGCCTGTCCTGCAGAGGATGGTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | CAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGAGGCCTGATGGGCGAGTaGTGGGGCAGGGCATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSCCWFCLHSEWQGPPSRGLMGE*WGRACL Trigger: GAGGCATGCCCTGCCCCACCACTCGCCCATCAGGCC...TCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | TGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGGAGCTCCACTGCAACCGGTTTaGCCTGGGGCACCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CWFCLHSEWQGPPSRQGAPLQPV*PGAPSS Trigger: AGAGGAGGGTGCCCCAGGCCAAACCGGTTGCAGTGG...AGCTCCTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | AGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCATCCGAGGAGCGAGGTTaGCCAGGTCCACCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RHAQSCCWFCLHSEWQGPSEERG*PGPPPR Trigger: TCGAGGAGGTGGACCTGGCCAACCTCGCTCCTCGGA...TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCACACCTTCTCCTCCACTaGAACCGGTTTGGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVVAGSASIQNGRGHPAHLLLH*NRFGLG Trigger: CCCCAGGCCAAACCGGTTGCAGTGGAGGAGAAGGTG...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | AGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCATTGGCGGCCTCCAGCTaGTCCTTCACCTTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RHAQSCCWFCLHSEWQGPLAASS*SFTFSS Trigger: GGAGGAGAAGGTGAAGGAGCAGCTGGAGGCCGCCAA...TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCACCCAAGACCATCCTCTaGAGGACAGGCCTGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVVAGSASIQNGRGHPAPKTIL*RTGLMG Trigger: GCCCATCAGGCCTGTCCTGCAGAGGATGGTCTTGGG...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGCAACCGGTTTGGCCTaGGGCACCCTCCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRVVAGSASIQNGRGHPAATGLA*GTLLFF Trigger: GAAGAAGAGGAGGGTGCCCCAGGCCAAACCGGTTGC...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | GAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGCTCCCACTGCAACCGGTTTaGCCTGGGGCACCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELTSSMGVSDLMGRESLLPLQPV*PGAPSS Trigger: AGAGGAGGGTGCCCCAGGCCAAACCGGTTGCAGTGG...GAGCAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | GACACAGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGTCCGAGGAGCGAGGTTaGCCAGGTCCACCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DTGTPRVVAGSASIQNGRSEERG*PGPPPR Trigger: TCGAGGAGGTGGACCTGGCCAACCTCGCTCCTCGGA...CCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | GAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGCTCCTGATGGGCGAGTGGTaGGGCAGGGCATGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELTSSMGVSDLMGRESLLLMGEW*GRACLS Trigger: ACTGAGGCATGCCCTGCCCCACCACTCGCCCATCAG...GAGCAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | AGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACACACCAGCCGTAGTTaGCTCCATCTTGCCCGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RHAQSCCWFCLHSEWQGPHTSRS*LHLARV Trigger: TACGCGGGCAAGATGGAGGCAACTACGGCTGGTGTG...TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | CTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGCTCAGATGGTGGGGCAGGGCATaGCTCAGTCGGAGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSSMGVSDLMGRESLLRWWGRA*LSRSHR Trigger: CCTGTGACTCCGACTGAGGCATGCCCTGCCCCACCA...TCTGAGCAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | CAAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTTGGTGGGGCAGGGCATaGCTCAGTCGGAGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: QGADLIHGGFRLDGQGVSWWGRA*LSRSHR Trigger: CCTGTGACTCCGACTGAGGCATGCCCTGCCCCACCA...AGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCACTCGCAGGGCAGGTATaGAGCATAGGCTGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVVAGSASIQNGRGHPALAGQV*SIGWQV Trigger: AACCTGCCAGCCTATGCTCCATACCTGCCCTGCGAG...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | AAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGCTGATGGGCGAGTGGTaGGGCAGGGCATGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KELTSSMGVSDLMGRESLLMGEW*GRACLS Trigger: ACTGAGGCATGCCCTGCCCCACCACTCGCCCATCAG...CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | AAGACCATCCTCTGCAGGACAGGCCTGATGGGCGAGTGGTGGGGCAGGGCATGCGCCCAGAGTTGTTGCTaGTTCTGCCTCCATTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KTILCRTGLMGEWWGRACAQSCC*FCLHSE Trigger: TTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGC...GCATGCCCTGCCCCACCACTCGCCCATCAGGCCTGTCCTGCAGAGGATGGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | GAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGCTCCACACCAGCCGTAGTTaGCTCCATCTTGCCCGCGTA | + |
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Preference number: 4 (lower is better) Translates to: ELTSSMGVSDLMGRESLLHTSRS*LHLARV Trigger: TACGCGGGCAAGATGGAGGCAACTACGGCTGGTGTG...GAGCAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | CACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCCTAAGTTCCCTGTaGTTCTCGCCTTCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HAQSCCWFCLHSEWQGPPSLSSL*FSPSSS Trigger: GGAGGAAGAAGGCGAGAAGCACAGGGAACTTAGGCT...GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | AAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGCACCTTCTCCTCCACTaGAACCGGTTTGGCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KELTSSMGVSDLMGRESLHLLLH*NRFGLG Trigger: CCCCAGGCCAAACCGGTTGCAGTGGAGGAGAAGGTG...CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | CACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCCACGCCCAGAGTTGTTaGTGGTTCTGCCTCCATTCA | + |
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Preference number: 4 (lower is better) Translates to: HAQSCCWFCLHSEWQGPPHAQSC*WFCLHS Trigger: TGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG...GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | CACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCATGTACATCCACATGTaGAGACACAGGCACGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: HAQSCCWFCLHSEWQGPPMYIHM*RHRHAQ Trigger: CTGGGCGTGCCTGTGTCTGCACATGTGGATGTACAT...GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | GTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGACGAGAATGAGAGACTaGGAGGTCCTCGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VVAGSASIQNGRGHPADKTRMRD*EVLAGQ Trigger: CTGCCCTGCGAGGACCTCCCAGTCTCTCATTCTCGT...CTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292314.6 |
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| CDS-3UTR CCA 90 bp | GACACAGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGTGCCTCCATTCAGAATaGCAGGGGCCACCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: DTGTPRVVAGSASIQNGRCLHSE*QGPPSR Trigger: TCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCA...CCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| 3UTR CAA 72 bp | CATCCACATGTGCAGACACAGGCACGCCCAGAGTTGTaGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HPHVQTQARPEL*LVLPPFRMAGA Trigger: GGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTCTGCACATGTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR TCA 90 bp | GACACAGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGATCCAAGGACGAGAATaGGAGACTGGGAGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: DTGTPRVVAGSASIQNGRIQGRE*ETGRSS Trigger: CGAGGACCTCCCAGTCTCTCATTCTCGTCCTTGGAT...CCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292314.6 |
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| CDS-3UTR TCA 90 bp | CAAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTTGGGGGTTTCAGACTTaGTGGGCAGGGAGTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QGADLIHGGFRLDGQGVSWGFQT*WAGSLC Trigger: GCAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCA...AGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR TCA 90 bp | GTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGCAGCAGACAAGGAGCTaGCCTCATCCATGGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VVAGSASIQNGRGHPADKQQTRS*PHPWGF Trigger: AAACCCCCATGGATGAGGTCAGCTCCTTGTCTGCTG...CTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | TGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGGAGCTCATCTTCCTTGTCCTTaGGCCCGGTTTTCTCCCGTA | + |
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Preference number: 4 (lower is better) Translates to: CWFCLHSEWQGPPSRQGAHLPCP*ARFSPV Trigger: TACGGGAGAAAACCGGGCGCAAGGACAAGGAAGATG...AGCTCCTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | AGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCAATGTACATCCACATGTaGAGACACAGGCACGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RHAQSCCWFCLHSEWQGPMYIHM*RHRHAQ Trigger: CTGGGCGTGCCTGTGTCTGCACATGTGGATGTACAT...TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | CTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGCTCAGACTCGCAGGGCAGGTATaGAGCATAGGCTGGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LTSSMGVSDLMGRESLLRLAGQV*SIGWQV Trigger: AACCTGCCAGCCTATGCTCCATACCTGCCCTGCGAG...TCTGAGCAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | AAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGTGCCTCCATTCAGAATaGCAGGGGCCACCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KELTSSMGVSDLMGRESLCLHSE*QGPPSR Trigger: TCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCA...CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | CACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCGCCCAGAGTTGTTGCTaGTTCTGCCTCCATTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HAQSCCWFCLHSEWQGPPAQSCC*FCLHSE Trigger: TTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGC...GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | GTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGAGGTCTTTTGTTCGGTaGCAGCATCCACTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVAGSASIQNGRGHPADKRSFVR*QHPLQR Trigger: CCTCTGCAGTGGATGCTGCCACCGAACAAAAGACCT...CTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | GACACAGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGAGGTCTTTTGTTCGGTaGCAGCATCCACTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: DTGTPRVVAGSASIQNGRRSFVR*QHPLQR Trigger: CCTCTGCAGTGGATGCTGCCACCGAACAAAAGACCT...CCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS-3UTR CCA 90 bp | AAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGACGAGAATGAGAGACTaGGAGGTCCTAGTGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KELTSSMGVSDLMGRESLTRMRD*EVLVGG Trigger: CCCACCCACTAGGACCTCCCAGTCTCTCATTCTCGT...CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425441.5 |
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| CDS-3UTR GCA 90 bp | AAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGAGCCTAAGTTCCCTGTaGTTCTCGCCTTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KELTSSMGVSDLMGRESLSLSSL*FSPSSS Trigger: GGAGGAAGAAGGCGAGAAGCACAGGGAACTTAGGCT...CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTCACGCCCAGAGTTGTTaGTGGTTCTGCCTCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGADLIHGGFRLDGQGVSHAQSC*WFCLHS Trigger: TGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG...AGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCACGATTTATCCAACGCTaGTCAGTGAAAGAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRVVAGSASIQNGRGHPARFIQR*SVKEQQ Trigger: TTGCTGCTCTTTCACTGATCAGCGTTGGATAAATCG...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425441.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGAAGTTGTTGCTGGTTCTaGCTCCATTCAGAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSCCWFCLHSEWQGPPSRSCCWF*LHSEWQ Trigger: CTGCCATTCTGAATGGAGGCAGAACCAGCAACAACT...TCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CCA 90 bp | GACACAGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGTATGGAGCATAGGCTaGCAGGTTGTAGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTGTPRVVAGSASIQNGRVWSIG*QVVALE Trigger: TTCCAAAGCTACAACCTGCCAGCCTATGCTCCATAC...CCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS GCA 90 bp | GATGGACTGCGGGTCGCTGACCACTGCCTTGCCCACCCCCGCGCATaGGCGACGACCGCACCAGCGCCAGAGGAGTCCCACGCCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGLRVADHCLAHPRA*ATTAPAPEESHAKQ Trigger: CTGCTTGGCGTGGGACTCCTCTGGCGCTGGTGCGGTCGTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604181.1 ENST00000605358.5 |
||
| CDS GCA 90 bp | ACACCCGGGAAGCAGGAGTCAGATGGACTGCGGGTCGCTGACCACTaGCTTGCCCACCCCCGCGCATGCGCGACGACCGCACCAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPGKQESDGLRVADH*LAHPRACATTAPAP Trigger: TGGCGCTGGTGCGGTCGTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCTGCTTCCCGGGTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604181.1 ENST00000605358.5 |
||
| CDS TCA 90 bp | ACGAGCAACACCCGGGAAGCAGGAGTCAGATGGACTGCGGGTCGCTaGCCACTGCCTTGCCCACCCCCGCGCATGCGCGACGACCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TSNTREAGVRWTAGR*PLPCPPPRMRDDRT Trigger: GGTGCGGTCGTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCTGCTTCCCGGGTGTTGCTCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604181.1 ENST00000605358.5 |
||
| CDS GCA 90 bp | CCAAGCAGCCCCAGACATCGTGGGAGGGCGCCGTCTTCTCGCGCATaGGTTAGCGCCCGCGCATGCGCGCCCTCGGCAGCTGTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSPRHRGRAPSSRA*VSARACAPSAAVFP Trigger: AGGAAAGACAGCTGCCGAGGGCGCGCATGCGCGGGCGCTAACGCATGCGCGAGAAGACGGCGCCCTCCCACGATGTCTGGGGCTGCTTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS CCA 90 bp | TCTCTGCACTGTGACGGCAGGAAGGGCCAAGCCCCAGGCCCATGCTaGCACCAAGAGTCCCCGAGTCAGCCTGCACCCGCCACGCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHCDGRKGQAPGPC*HQESPSQPAPATHG Trigger: CCCGTGCGTGGCGGGTGCAGGCTGACTCGGGGACTCTTGGTGCCAGCATGGGCCTGGGGCTTGGCCCTTCCTGCCGTCACAGTGCAGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000488069.5 ENST00000603885.5 ENST00000604367.1 |
||
| CDS GCA 90 bp | CTGCCTACCGTGGCCCCCAGGGAGAGACGGGACCCCAGGCTTCCTTaGTCCCACCTCTGTGTGGCCCGCAACCAGCCAGAGGTGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LPTVAPRERRDPRLP*SHLCVARNQPEVKT Trigger: GGTCTTCACCTCTGGCTGGTTGCGGGCCACACAGAGGTGGGAGCAAGGAAGCCTGGGGTCCCGTCTCTCCCTGGGGGCCACGGTAGGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS GCA 90 bp | CTCTTGCTCTGGTCCTCTGGTCACCATCAGGGAGTGACTTGCTCCTaGCCACTGTGGGCCCTGCTCCTCCTCCAGCCACCGGCCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLWSSGHHQGVTCS*PLWALLLLQPPAQP Trigger: GGGCTGGGCCGGTGGCTGGAGGAGGAGCAGGGCCCACAGTGGGCAGGAGCAAGTCACTCCCTGATGGTGACCAGAGGACCAGAGCAAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS GCA 90 bp | CCGCGCATGCGCGCCCTCGGCAGCTGTCTTTCCTTATTAGCCCTTTaGTCTCCTCAAGCGCGACCCGGACCCCGAACGCTGGACGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRMRALGSCLSLLAL*SPQARPGPRTLDAS Trigger: TGAGGCGTCCAGCGTTCGGGGTCCGGGTCGCGCTTGAGGAGAGCAAAGGGCTAATAAGGAAAGACAGCTGCCGAGGGCGCGCATGCGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS GCA 90 bp | GCCAGGCCCTCTCCCCTGCCTCAGTGCTCCACACTGCCCGTCCACTaGTGTGTGTGGCTGAATGACTGGCCCCTGTCTCTGACCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARPSPLPQCSTLPVH*CVWLNDWPLSLTHP Trigger: TGGGTGGGTCAGAGACAGGGGCCAGTCATTCAGCCACACACAGCAGTGGACGGGCAGTGTGGAGCACTGAGGCAGGGGAGAGGGCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS GCA 90 bp | CTTCCTTGTCACGAGCAACACCCGGGAAGCAGGAGTCAGATGGACTaGGGGTCGCTGACCACTGCCTTGCCCACCCCCGCGCATGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LPCHEQHPGSRSQMD*GSLTTALPTPAHAR Trigger: TCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCTGCTTCCCGGGTGTTGCTCGTGACAAGGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000603885.5 ENST00000604164.5 ENST00000605358.5 |
||
| CDS TCA 90 bp | GCCTCAGTGCTCCACACTGCCCGTCCACTGCTGTGTGTGGCTGAATaGCTGGCCCCTGTCTCTGACCCACCCAGGGCCCACAGGACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASVLHTARPLLCVAE*LAPVSDPPRAHRTH Trigger: ATGGGTCCTGTGGGCCCTGGGTGGGTCAGAGACAGGGGCCAGTCATTCAGCCACACACAGCAGTGGACGGGCAGTGTGGAGCACTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 90 bp | CTCTCCTCAAGCGCGACCCGGACCCCGAACGCTGGACGCCTCAACTaGGACCCTCACTCCACACTTCTCACCTTGCGCCCGGTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSATRTPNAGRLN*DPHSTLLTLRPVFS Trigger: GGAGAAAACCGGGCGCAAGGTGAGAAGTGTGGAGTGAGGGTCGCAGTTGAGGCGTCCAGCGTTCGGGGTCCGGGTCGCGCTTGAGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS GCA 90 bp | AGATACCTACACGAGCAACACCCGGGAAGCAGGAGTCAGATGGACTaGGGGTCGCTGACCACTGCCTTGCCCACCCCCGCGCATGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RYLHEQHPGSRSQMD*GSLTTALPTPAHAR Trigger: TCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCTGCTTCCCGGGTGTTGCTCGTGTAGGTATCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS CCA 90 bp | CAGTGCTCCACACTGCCCGTCCACTGCTGTGTGTGGCTGAATGACTaGCCCCTGTCTCTGACCCACCCAGGGCCCACAGGACCCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: QCSTLPVHCCVWLND*PLSLTHPGPTGPIT Trigger: GGTGATGGGTCCTGTGGGCCCTGGGTGGGTCAGAGACAGGGGCCAGTCATTCAGCCACACACAGCAGTGGACGGGCAGTGTGGAGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS CCA 90 bp | TCTCCCCTGCCTCAGTGCTCCACACTGCCCGTCCACTGCTGTGTGTaGCTGAATGACTGGCCCCTGTCTCTGACCCACCCAGGGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPLPQCSTLPVHCCV*LNDWPLSLTHPGPT Trigger: TGTGGGCCCTGGGTGGGTCAGAGACAGGGGCCAGTCATTCAGCCACACACAGCAGTGGACGGGCAGTGTGGAGCACTGAGGCAGGGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS-3UTR CAA 90 bp | AAGACCATCCTCTGCAGGACAGGCCTGATGGGCGAGTGGTGGGGCAGGGCATGCGTAGTTGCCTCCATCTaGCCCGCGTACGCCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTILCRTGLMGEWWGRACVVASI*PAYAPP Trigger: AGGAGGGGCGTACGCGGGCAAGATGGAGGCAACTAC...GCATGCCCTGCCCCACCACTCGCCCATCAGGCCTGTCCTGCAGAGGATGGTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | AGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCAATGACGGGCTCGGGCTaGGCGGCCTCCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RHAQSCCWFCLHSEWQGPMTGSG*AASSCS Trigger: GGAGCAGCTGGAGGCCGCCAAGCCCGAGCCCGTCAT...TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGATGACGGGCTCGGGCTaGGCGGCCTCCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PELLLVLPPFRMAGATQQMTGSG*AASSCS Trigger: GGAGCAGCTGGAGGCCGCCAAGCCCGAGCCCGTCAT...CTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS GCA 90 bp | TGCCCCGACAGCCTCTGCTGCTGCCGAAGGCCGACTGTGTGCATCTaGCATGAGATGGTAACAAAGGGTCCTGCCTGCAGGCCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPDSLCCCRRPTVCI*HEMVTKGPACRPNS Trigger: GGAGTTGGGCCTGCAGGCAGGACCCTTTGTTACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCGGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 90 bp | CTTCAGTGCCCCGACAGCCTCTGCTGCTGCCGAAGGCCGACTGTGTaGATCTGCCATGAGATGGTAACAAAGGGTCCTGCCTGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQCPDSLCCCRRPTV*ICHEMVTKGPACRP Trigger: GGGCCTGCAGGCAGGACCCTTTGTTACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCGGGGCACTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 90 bp | GGTGCAATTAAACAGAGAAGGCCTGTGGAAAACGCGCTGCCACTCTaGAGGGACACTGCCTACCGTGGCCCCCAGGGAGAGACGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GAIKQRRPVENALPL*RDTAYRGPQGETGP Trigger: GGGTCCCGTCTCTCCCTGGGGGCCACGGTAGGCAGTGTCCCTGCAGAGTGGCAGCGCGTTTTCCACAGGCCTTCTCTGTTTAATTGCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CCA 90 bp | CCTCTGGCATTAGGAGTCATGCTCGGTTGCTGGAGGGGGCTGCCCTaGGGAAGAGGCCAGGACATTCCCCTTCTGTACCCTCCGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: PLALGVMLGCWRGLP*GRGQDIPLLYPPKP Trigger: GGGTTTCGGAGGGTACAGAAGGGGAATGTCCTGGCCTCTTCCCCAGGGCAGCCCCCTCCAGCAACCGAGCATGACTCCTAATGCCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS-3UTR CAA 90 bp | AGGCACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCATTCCGAGGAGCGAGGTaGGCCAGGTCCACCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RHAQSCCWFCLHSEWQGPFRGAR*ARSTSS Trigger: CGAGGAGGTGGACCTGGCCAACCTCGCTCCTCGGAA...TGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS TCA 90 bp | CGACAGCCTCTGCTGCTGCCGAAGGCCGACTGTGTGCATCTGCCATaGGATGGTAACAAAGGGTCCTGCCTGCAGGCCCAACTCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQPLLLPKADCVHLP*DGNKGSCLQAQLLS Trigger: GGACAGGAGTTGGGCCTGCAGGCAGGACCCTTTGTTACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS TCA 90 bp | CACTCAGATCCCTGGGAGGCCTCGGTCTCAGGGTGTGAGCAGGACTaGGAAGGCACAAGAGGACTCTTCAGTGCCCCGACAGCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSDPWEASVSGCEQD*EGTRGLFSAPTASA Trigger: AGCAGAGGCTGTCGGGGCACTGAAGAGTCCTCTTGTGCCTTCTCAGTCCTGCTCACACCCTGAGACCGAGGCCTCCCAGGGATCTGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS CCA 90 bp | GCTCTGAGGATGTCCTCTGGGTCCCGGCCTAGCCAGAGCCACAGGTaGCTTTTCCTCCATCCCACCTCAGGTGTATGCTCCCAAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALRMSSGSRPSQSHR*LFLHPTSGVCSQDQ Trigger: CTGGTCTTGGGAGCATACACCTGAGGTGGGATGGAGGAAAAGCCACCTGTGGCTCTGGCTAGGCCGGGACCCAGAGGACATCCTCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS-3UTR CAA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGTAGTTGCCTCCATCTaGCCCGCGTACGCCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRVVAGSASIQNGRGHPAVVASI*PAYAPP Trigger: AGGAGGGGCGTACGCGGGCAAGATGGAGGCAACTAC...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | CACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCGGCTCCCCATCTTCCTaGTCCTTGCGCCCGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HAQSCCWFCLHSEWQGPPGSPSS*SLRPVF Trigger: GAAAACCGGGCGCAAGGACAAGGAAGATGGGGAGCC...GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | GTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGTTCCGAGGAGCGAGGTaGGCCAGGTCCACCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VVAGSASIQNGRGHPADKFRGAR*ARSTSS Trigger: CGAGGAGGTGGACCTGGCCAACCTCGCTCCTCGGAA...CTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS GCA 90 bp | AGAGCAAGTGGCGAAGAGAAACAGGACACACAGAAGCAGCGAGGATaGCAGGGTGGTCCAGGCACTCACCACCTCCTCGATGACGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RASGEEKQDTQKQRG*QGGPGTHHLLDDGL Trigger: GAGCCCGTCATCGAGGAGGTGGTGAGTGCCTGGACCACCCTGGCATCCTCGCTGCTTCTGTGTGTCCTGTTTCTCTTCGCCACTTGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488069.5 ENST00000604367.1 |
||
| CDS-3UTR CAA 90 bp | CACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCTCCTTTTCTCCCGTCTaGCATCGCGCAGGCCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HAQSCCWFCLHSEWQGPPSFSPV*HRAGLR Trigger: CCTTAGGCCTGCGCGATGCAAGACGGGAGAAAAGGA...GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGGAGCTCAGGCACGCCCAGAGTaGTTGCTGGTTCTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CWFCLHSEWQGPPSRQGAQARPE*LLVLPP Trigger: TGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTG...AGCTCCTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS TCA 90 bp | TTTCAAACCCCACTCAGATCCCTGGGAGGCCTCGGTCTCAGGGTGTaGGCAGGACTGAGAAGGCACAAGAGGACTCTTCAGTGCCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FQTPLRSLGGLGLRV*AGLRRHKRTLQCPD Trigger: GTCGGGGCACTGAAGAGTCCTCTTGTGCCTTCTCAGTCCTGCTCACACCCTGAGACCGAGGCCTCCCAGGGATCTGAGTGGGGTTTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS TCA 90 bp | CCAAGAATCAGGCGAGAGGGATATAGCTCTACCTCCGGCTCAAGGTaGAGACAGACACAAGCCTCCCGGCCCACAGCACCCTCTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRIRREGYSSTSGSR*RQTQASRPTAPSLP Trigger: TGGGAGAGAGGGTGCTGTGGGCCGGGAGGCTTGTGTCTGTCTTCACCTTGAGCCGGAGGTAGAGCTATATCCCTCTCGCCTGATTCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS GCA 90 bp | GGACTGAGAAGGCACAAGAGGACTCTTCAGTGCCCCGACAGCCTCTaGTGCTGCCGAAGGCCGACTGTGTGCATCTGCCATGAGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLRRHKRTLQCPDSL*CCRRPTVCICHEMV Trigger: TACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCGGGGCACTGAAGAGTCCTCTTGTGCCTTCTCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS CCA 90 bp | TGGGGCAGGGCATGCCTCAGTCGGAGTCACAGGTCTTTTGTTCGGTaGCAGCATCCACTGCAGAGGCTAGGCTGTCTTCCTGGCCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WGRACLSRSHRSFVR*QHPLQRLGCLPGLS Trigger: TGAAAGGCCAGGAAGACAGCCTAGCCTCTGCAGTGGATGCTGCCACCGAACAAAAGACCTGTGACTCCGACTGAGGCATGCCCTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000292314.6 ENST00000425441.5 ENST00000604367.1 ENST00000683445.1 |
||
| CDS-3UTR CAA 90 bp | CACGCCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCATGGGGGTTTCAGACTaGATGGGCAGGGAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HAQSCCWFCLHSEWQGPPMGVSD*MGRESL Trigger: CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCAT...GGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGCACGCCCAGAGTTGTaGCTGGTTCTGCCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PRVVAGSASIQNGRGHPAARPEL*LVLPPF Trigger: GAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGC...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS TCA 90 bp | CTCCTGTCCTGGTACTGCTGGTTATTCTCAGAGAGCAAAGCCTGCTaGGGTGGAGGGTGGCTGACAGTGCCAGGAAGCAGAGGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSWYCWLFSESKAC*GGGWLTVPGSRGGE Trigger: CTCTCCACCTCTGCTTCCTGGCACTGTCAGCCACCCTCCACCTCAGCAGGCTTTGCTCTCTGAGAATAACCAGCAGTACCAGGACAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494655.5 ENST00000604164.5 ENST00000604181.1 |
||
| CDS GCA 90 bp | TTTGCACGAAACGACTCCGGCTGTATACCCACTGCTGTCACTTGCTaGCCTGTCCAAGGAGTGCTGCCGGACTGGGGAGTCTGTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: FARNDSGCIPTAVTC*PVQGVLPDWGVCLT Trigger: AGTCAGACAGACTCCCCAGTCCGGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTTTCGTGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS GCA 90 bp | CTGAGAAGGCACAAGAGGACTCTTCAGTGCCCCGACAGCCTCTGCTaGTGCCGAAGGCCGACTGTGTGCATCTGCCATGAGATGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LRRHKRTLQCPDSLC*CRRPTVCICHEMVT Trigger: TGTTACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCGGGGCACTGAAGAGTCCTCTTGTGCCTTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS CCA 90 bp | CAAAGGTGGATGGTTTCTCAGAGACCCTCTCTTGCTCTGGTCCTCTaGTCACCATCAGGGAGTGACTTGCTCCTGCCCACTGTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRWMVSQRPSLALVL*SPSGSDLLLPTVGP Trigger: AGGGCCCACAGTGGGCAGGAGCAAGTCACTCCCTGATGGTGACCAGAGGACCAGAGCAAGAGAGGGTCTCTGAGAAACCATCCACCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGATCCTTTTCTCCCGTCTaGCATCGCGCAGGCCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSCCWFCLHSEWQGPPSRSFSPV*HRAGLR Trigger: CCTTAGGCCTGCGCGATGCAAGACGGGAGAAAAGGA...TCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | GTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGCCATCTTCCTTGTCCTaGCGCCCGGTTTTCTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VVAGSASIQNGRGHPADKPSSLS*RPVFSR Trigger: ACGGGAGAAAACCGGGCGCAAGGACAAGGAAGATGG...CTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGGCTCCCCATCTTCCTaGTCCTTGCGCCCGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGADLIHGGFRLDGQGVSGSPSS*SLRPVF Trigger: GAAAACCGGGCGCAAGGACAAGGAAGATGGGGAGCC...AGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGGAGCTTTGGCCACATCTCTCTaGAGGTCCCAGTCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CWFCLHSEWQGPPSRQGALATSL*RSQSGF Trigger: GAAGCCTGACTGGGACCTCAAGAGAGATGTGGCCAA...AGCTCCTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGACAAGGAGCTGGAGTCACAGGTCTTTaGTTCGGTGGCAGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CWFCLHSEWQGPPSRQGAGVTGL*FGGSIH Trigger: GTGGATGCTGCCACCGAACAAAAGACCTGTGACTCC...AGCTCCTTGTCTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGATGGGGGTTTCAGACTaGATGGGCAGGGAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PELLLVLPPFRMAGATQQMGVSD*MGRESL Trigger: CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCAT...CTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTCAGGCACGCCCAGAGTaGTTGCTGGTTCTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGADLIHGGFRLDGQGVSQARPE*LLVLPP Trigger: TGGAGGCAGAACCAGCAACAACTCTGGGCGTGCCTG...AGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS GCA 90 bp | ATTTTTGCACGAAACGACTCCGGCTGTATACCCACTGCTGTCACTTaGTGCCCTGTCCAAGGAGTGCTGCCGGACTGGGGAGTCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IFARNDSGCIPTAVT*CPVQGVLPDWGVCL Trigger: CAGACAGACTCCCCAGTCCGGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTTTCGTGCAAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS GCA 90 bp | AGAAGGCACAAGAGGACTCTTCAGTGCCCCGACAGCCTCTGCTGCTaGCGAAGGCCGACTGTGTGCATCTGCCATGAGATGGTAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRHKRTLQCPDSLCC*RRPTVCICHEMVTK Trigger: CTTTGTTACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCGGGGCACTGAAGAGTCCTCTTGTGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS CCA 90 bp | GAGCAGGGAATCATGAGAGAAACGGCCAGCCTGACCCAGAAGCAGTaGTCATATTGTAGGAGCTGCAGTGCAGCCCTCAGGACACGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EQGIMRETASLTQKQ*SYCRSCSAALRTRA Trigger: TGCTCGTGTCCTGAGGGCTGCACTGCAGCTCCTACAATATGACCACTGCTTCTGGGTCAGGCTGGCCGTTTCTCTCATGATTCCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604181.1 |
||
| CDS-3UTR CAA 90 bp | AAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGGCACGCCCAGAGTTGTaGCTGGTTCTGCCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KELTSSMGVSDLMGRESLARPEL*LVLPPF Trigger: GAATGGAGGCAGAACCAGCAACAACTCTGGGCGTGC...CAGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS TCA 90 bp | CTGTACCCTCCGAAACCCAGCATAAACCATCATTCCCTGTCCCACTaGGGCAGGGGGACTAGCATCACAAACCCACCCAACACAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LYPPKPSINHHSLSH*GRGTSITNPPNTRD Trigger: GTCCCTTGTGTTGGGTGGGTTTGTGATGCTAGTCCCCCTGCCTCAGTGGGACAGGGAATGATGGTTTATGCTGGGTTTCGGAGGGTACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS GCA 90 bp | GGTTGGATGAGGCTAGATGGTCCAGGCAGAGCTTCACATGCCAAGTaGAGAAGGGGCACTTACTCAGTAGGCAATGGAGAACCACGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GWMRLDGPGRASHAK*RRGTYSVGNGEPRH Trigger: GTGGCGTGGTTCTCCATTGCCTACTGAGTAAGTGCCCCTTCTGCACTTGGCATGTGAAGCTCTGCCTGGACCATCTAGCCTCATCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460035.1 |
||
| CDS GCA 90 bp | CCTCTTTTTGATTTTTGCACGAAACGACTCCGGCTGTATACCCACTaGTGTCACTTGCTGCCCTGTCCAAGGAGTGCTGCCGGACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLFDFCTKRLRLYTH*CHLLPCPRSAAGLG Trigger: CCCCAGTCCGGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTTTCGTGCAAAAATCAAAAAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGCTGACCTCATCCATGGGGGTTTCAGACTTGATGGGCAGGGAGTCTCTGGAGTCACAGGTCTTTaGTTCGGTGGCAGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGADLIHGGFRLDGQGVSGVTGL*FGGSIH Trigger: GTGGATGCTGCCACCGAACAAAAGACCTGTGACTCC...AGAGACTCCCTGCCCATCAAGTCTGAAACCCCCATGGATGAGGTCAGCTCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS GCA 90 bp | CAGAGGAGGTTGGATGAGGCTAGATGGTCCAGGCAGAGCTTCACATaGCAAGTGCAGAAGGGGCACTTACTCAGTAGGCAATGGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: QRRLDEARWSRQSFT*QVQKGHLLSRQWRT Trigger: GGTTCTCCATTGCCTACTGAGTAAGTGCCCCTTCTGCACTTGGCATGTGAAGCTCTGCCTGGACCATCTAGCCTCATCCAACCTCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460035.1 |
||
| CDS GCA 90 bp | CCGACTGTGTGCATCTGCCATGAGATGGTAACAAAGGGTCCTGCCTaGAGGCCCAACTCCTGTCCTGGTACTGCTGGTTATTCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTVCICHEMVTKGPA*RPNSCPGTAGYSQR Trigger: TCTCTGAGAATAACCAGCAGTACCAGGACAGGAGTTGGGCCTGCAGGCAGGACCCTTTGTTACCATCTCATGGCAGATGCACACAGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494655.5 ENST00000604164.5 |
||
| CDS CCA 90 bp | GCATCACAAACCCACCCAACACAAGGGACTGAGCTAAGGCAAAGGTaGATGGTTTCTCAGAGACCCTCTCTTGCTCTGGTCCTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASQTHPTQGTELRQR*MVSQRPSLALVLWS Trigger: TGACCAGAGGACCAGAGCAAGAGAGGGTCTCTGAGAAACCATCCACCTTTGCCTTAGCTCAGTCCCTTGTGTTGGGTGGGTTTGTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS CCA 90 bp | GGGCACCCAGAAGTGCACAAGCACTCAGCCCATTCTCTCTGGCTCTaGGTTTCCCAGGACATATGCCCCATGCTTTTGTTTCATCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: GHPEVHKHSAHSLWL*VSQDICPMLLFHQI Trigger: AATTTGATGAAACAAAAGCATGGGGCATATGTCCTGGGAAACCCAGAGCCAGAGAGAATGGGCTGAGTGCTTGTGCACTTCTGGGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCACACACAGGGGTTTACTaGTTTCTATTTCCAGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PRVVAGSASIQNGRGHPAHTGVY*FLFPDF Trigger: AAAATCTGGAAATAGAAACAAGTAAACCCCTGTGTG...TGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAGTTGTTGCTGGTTCTGCCTCCATTCAGAATGGCAGGGGCCACCCAGCAGCACACAGGGGTTTACTaGTTTCTATTTCCAGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PELLLVLPPFRMAGATQQHTGVY*FLFPDF Trigger: AAAATCTGGAAATAGAAACAAGTAAACCCCTGTGTG...CTGCTGGGTGGCCCCTGCCATTCTGAATGGAGGCAGAACCAGCAACAACTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292314.6 ENST00000425441.5 |
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| CDS GCA 90 bp | AGTCAGGAAGCATGGATGCTGACAATAACTACAAGACCAGAGAGCTaGCTGGATACATACAAAGTGAGGACTGGCTTCTCACATAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQEAWMLTITTRPES*LDTYKVRTGFSHNP Trigger: GGGATTATGTGAGAAGCCAGTCCTCACTTTGTATGTATCCAGGCAGCTCTCTGGTCTTGTAGTTATTGTCAGCATCCATGCTTCCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CCA 72 bp | CGTCCCGGAGGCTCAGGCTGGCCCTTCCAATGGCACTaGTGGGGCAGGGCAGCGGGGCACCCTCCCGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RPGGSGWPFQWH*WGRAAGHPPGP Trigger: CGGCCCGGGAGGGTGCCCCGCTGCCCTGCCCCACCAGTGCCATTGGAAGGGCCAGCCTGAGCCTCCGGGACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605875.1 |
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| CDS GCA 72 bp | CGGGTCGCTGACCACTGCCTTGCCCACCCCCGCGCATaGGCGACGACCGCACCAGCGCCAGAGGAGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RVADHCLAHPRA*ATTAPAPEESH Trigger: GTGGGACTCCTCTGGCGCTGGTGCGGTCGTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604181.1 ENST00000605358.5 |
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| CDS GCA 72 bp | CCCAGACATCGTGGGAGGGCGCCGTCTTCTCGCGCATaGGTTAGCGCCCGCGCATGCGCGCCCTCGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRHRGRAPSSRA*VSARACAPSAA Trigger: AGCTGCCGAGGGCGCGCATGCGCGGGCGCTAACGCATGCGCGAGAAGACGGCGCCCTCCCACGATGTCTGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS CAA 90 bp | CCGGGAAGCAGGAGTCAGATGGACTGCGGGTCGCTGACCACTGCCTaGCCCACCCCCGCGCATGCGCGACGACCGCACCAGCGCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSRSQMDCGSLTTA*PTPAHARRPHQRQR Trigger: CCTCTGGCGCTGGTGCGGTCGTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCTGCTTCCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604181.1 ENST00000605358.5 |
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| CDS TCA 72 bp | ACCCGGGAAGCAGGAGTCAGATGGACTGCGGGTCGCTaGCCACTGCCTTGCCCACCCCCGCGCATGCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: TREAGVRWTAGR*PLPCPPPRMRD Trigger: GTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCTGCTTCCCGGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604164.5 ENST00000604181.1 ENST00000605358.5 |
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| CDS CAA 72 bp | AGGAGTCAGATGGACTGCGGGTCGCTGACCACTGCCTaGCCCACCCCCGCGCATGCGCGACGACCGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSQMDCGSLTTA*PTPAHARRPHQ Trigger: CTGGTGCGGTCGTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604181.1 ENST00000605358.5 |
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| CDS TCA 72 bp | ATGCCAGGGTGGTCCAGGCACTCACCACCTCCTCGATaGCGGGCTCGGGCTTGGCGGCCTCCAGCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MPGWSRHSPPPR*RARAWRPPAAP Trigger: AGGAGCAGCTGGAGGCCGCCAAGCCCGAGCCCGTCATCGAGGAGGTGGTGAGTGCCTGGACCACCCTGGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488069.5 ENST00000604367.1 |
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| CDS GCA 72 bp | AGCGCGACCCGGACCCCGAACGCTGGACGCCTCAACTaGGACCCTCACTCCACACTTCTCACCTTGCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SATRTPNAGRLN*DPHSTLLTLRP Trigger: CGGGCGCAAGGTGAGAAGTGTGGAGTGAGGGTCGCAGTTGAGGCGTCCAGCGTTCGGGGTCCGGGTCGCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS GCA 72 bp | AAGCAGGAGTCAGATGGACTGCGGGTCGCTGACCACTaGCTTGCCCACCCCCGCGCATGCGCGACGACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: KQESDGLRVADH*LAHPRACATTA Trigger: TGCGGTCGTCGCGCATGCGCGGGGGTGGGCAAGGCAGTGGTCAGCGACCCGCAGTCCATCTGACTCCTGCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000492819.1 ENST00000603885.5 ENST00000604181.1 ENST00000605358.5 |
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| CDS CAA 90 bp | CCCGCGCATGCGCGCCCTCGGCAGCTGTCTTTCCTTATTAGCCCTTaGCTCTCCTCAAGCGCGACCCGGACCCCGAACGCTGGACGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAHARPRQLSFLISP*LSSSATRTPNAGRL Trigger: GAGGCGTCCAGCGTTCGGGGTCCGGGTCGCGCTTGAGGAGAGCAAAGGGCTAATAAGGAAAGACAGCTGCCGAGGGCGCGCATGCGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS TCA 72 bp | GCTCCCACCTCTGTGTGGCCCGCAACCAGCCAGAGGTaGAGACCCTGCAAAGGCAGCTCTGGAGGAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: APTSVWPATSQR*RPCKGSSGGGA Trigger: GGCCCCTCCTCCAGAGCTGCCTTTGCAGGGTCTTCACCTCTGGCTGGTTGCGGGCCACACAGAGGTGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604367.1 |
||
| CDS GCA 72 bp | AGGCCCATGCTGGCACCAAGAGTCCCCGAGTCAGCCTaGACCCGCCACGCACGGGCAACACTCACCAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPMLAPRVPESA*TRHARATLTSQ Trigger: CTGACTGGTGAGTGTTGCCCGTGCGTGGCGGGTGCAGGCTGACTCGGGGACTCTTGGTGCCAGCATGGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488069.5 ENST00000603885.5 ENST00000604367.1 |
||
| CDS TCA 72 bp | CTCCACACTGCCCGTCCACTGCTGTGTGTGGCTGAATaGCTGGCCCCTGTCTCTGACCCACCCAGGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LHTARPLLCVAE*LAPVSDPPRAH Trigger: GTGGGCCCTGGGTGGGTCAGAGACAGGGGCCAGTCATTCAGCCACACACAGCAGTGGACGGGCAGTGTGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS CCA 72 bp | CAGTCAGGCTTCCGAGGAGCGAGGTTGGCCAGGTCCTaGGAAGGGAGGAGACACACATCAGGGTGGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSGFRGARLARS*EGRRHTSGWRG Trigger: GCCCCTCCACCCTGATGTGTGTCTCCTCCCTTCCCAGGACCTGGCCAACCTCGCTCCTCGGAAGCCTGACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488069.5 ENST00000604367.1 |
||
| CDS CCA 72 bp | CCAGAAGCTCCTGGTGGCTGTGCTGTTCCCACGCCATaGCAAGAGTCTAGGCAAGCCCTGGGCCAGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PEAPGGCAVPTP*QESRQALGQAL Trigger: GAGGGCCTGGCCCAGGGCTTGCCTAGACTCTTGCCATGGCGTGGGAACAGCACAGCCACCAGGAGCTTCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494655.5 |
||
| CDS CAA 72 bp | CATCTTGCCCGCGTACGCCCCTCCTTTTCTCCCGTCTaGCATCGCGCAGGCCTCGCAGGGCAGGTATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLARVRPSFSPV*HRAGLAGQVWS Trigger: GCTCCATACCTGCCCTGCGAGGCCTGCGCGATGCAAGACGGGAGAAAAGGAGGGGCGTACGCGGGCAAGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS CAA 90 bp | GCCTCTTCCTCTAGCCGGCCCACACCAGCCGTAGTTGCCTCCATCTaGCCCGCGTACGCCCCTCCTTTTCTCCCGTCTTGCATCGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSRPTPAVVASI*PAYAPPFLPSCIAQ Trigger: CTGCGCGATGCAAGACGGGAGAAAAGGAGGGGCGTACGCGGGCAAGATGGAGGCAACTACGGCTGGTGTGGGCCGGCTAGAGGAAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000292314.6 ENST00000425441.5 ENST00000446836.5 ENST00000492819.1 ENST00000605875.1 |
||
| CDS GCA 72 bp | ATCTTGCCCGCGTACGCCCCTCCTTTTCTCCCGTCTTaGATCGCGCAGGCCTCGCAGGGCAGGTATGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ILPAYAPPFLPS*IAQASQGRYGA Trigger: TGCTCCATACCTGCCCTGCGAGGCCTGCGCGATGCAAGACGGGAGAAAAGGAGGGGCGTACGCGGGCAAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS GCA 72 bp | CGCGCCCTCGGCAGCTGTCTTTCCTTATTAGCCCTTTaGTCTCCTCAAGCGCGACCCGGACCCCGAACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RALGSCLSLLAL*SPQARPGPRTL Trigger: CAGCGTTCGGGGTCCGGGTCGCGCTTGAGGAGAGCAAAGGGCTAATAAGGAAAGACAGCTGCCGAGGGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
||
| CDS CCA 72 bp | ACCATCCTCTGCAGGACAGGCCTGATGGGCGAGTGGTaGGGCAGGGCATGCCTCAGTCGGAGTCACAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TILCRTGLMGEW*GRACLSRSHRS Trigger: AGACCTGTGACTCCGACTGAGGCATGCCCTGCCCCACCACTCGCCCATCAGGCCTGTCCTGCAGAGGATGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292314.6 ENST00000425441.5 ENST00000604367.1 ENST00000683445.1 |
||
| CDS CCA 72 bp | AAGACCATCCTCTGCAGGACAGGCCTGATGGGCGAGTaGTGGGGCAGGGCATGCCTCAGTCGGAGTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: KTILCRTGLMGE*WGRACLSRSHR Trigger: CCTGTGACTCCGACTGAGGCATGCCCTGCCCCACCACTCGCCCATCAGGCCTGTCCTGCAGAGGATGGTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000292314.6 ENST00000425441.5 ENST00000604367.1 ENST00000683445.1 |
||
| CDS CAA 72 bp | TCTAGCCGGCCCACACCAGCCGTAGTTGCCTCCATCTaGCCCGCGTACGCCCCTCCTTTTCTCCCGTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRPTPAVVASI*PAYAPPFLPSC Trigger: GCAAGACGGGAGAAAAGGAGGGGCGTACGCGGGCAAGATGGAGGCAACTACGGCTGGTGTGGGCCGGCTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000292314.6 ENST00000425441.5 ENST00000446836.5 ENST00000492819.1 ENST00000605875.1 |
||
| CDS CAA 72 bp | GCGCGCCCTCGGCAGCTGTCTTTCCTTATTAGCCCTTaGCTCTCCTCAAGCGCGACCCGGACCCCGAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARPRQLSFLISP*LSSSATRTPNA Trigger: AGCGTTCGGGGTCCGGGTCGCGCTTGAGGAGAGCAAAGGGCTAATAAGGAAAGACAGCTGCCGAGGGCGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS GCA 72 bp | TCTCCCCTGCCTCAGTGCTCCACACTGCCCGTCCACTaGTGTGTGTGGCTGAATGACTGGCCCCTGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SPLPQCSTLPVH*CVWLNDWPLSL Trigger: CAGAGACAGGGGCCAGTCATTCAGCCACACACAGCAGTGGACGGGCAGTGTGGAGCACTGAGGCAGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 72 bp | AAACAGAGAAGGCCTGTGGAAAACGCGCTGCCACTCTaGAGGGACACTGCCTACCGTGGCCCCCAGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: KQRRPVENALPL*RDTAYRGPQGE Trigger: CTCTCCCTGGGGGCCACGGTAGGCAGTGTCCCTGCAGAGTGGCAGCGCGTTTTCCACAGGCCTTCTCTGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CCA 72 bp | CCCGTCTTGCATCGCGCAGGCCTCGCAGGGCAGGTATaGAGCATAGGCTGGCAGGTTGTAGCTTTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PVLHRAGLAGQV*SIGWQVVALEA Trigger: GGCTTCCAAAGCTACAACCTGCCAGCCTATGCTCCATACCTGCCCTGCGAGGCCTGCGCGATGCAAGACGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS CCA 72 bp | TTTGCTCTCCTCAAGCGCGACCCGGACCCCGAACGCTaGACGCCTCAACTGCGACCCTCACTCCACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: FALLKRDPDPER*TPQLRPSLHTS Trigger: AGAAGTGTGGAGTGAGGGTCGCAGTTGAGGCGTCCAGCGTTCGGGGTCCGGGTCGCGCTTGAGGAGAGCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS CCA 72 bp | CCTCAGTGCTCCACACTGCCCGTCCACTGCTGTGTGTaGCTGAATGACTGGCCCCTGTCTCTGACCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: PQCSTLPVHCCV*LNDWPLSLTHP Trigger: TGGGTGGGTCAGAGACAGGGGCCAGTCATTCAGCCACACACAGCAGTGGACGGGCAGTGTGGAGCACTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS CAA 72 bp | CGCCTCAACTGCGACCCTCACTCCACACTTCTCACCTaGCGCCCGGTTTTCTCCCGTAGGGCCTTCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: RLNCDPHSTLLT*RPVFSRRAFSR Trigger: ACGGCTGAAGGCCCTACGGGAGAAAACCGGGCGCAAGGTGAGAAGTGTGGAGTGAGGGTCGCAGTTGAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS TCA 72 bp | AGGCGAGAGGGATATAGCTCTACCTCCGGCTCAAGGTaGAGACAGACACAAGCCTCCCGGCCCACAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RREGYSSTSGSR*RQTQASRPTAP Trigger: GGGTGCTGTGGGCCGGGAGGCTTGTGTCTGTCTTCACCTTGAGCCGGAGGTAGAGCTATATCCCTCTCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS GCA 72 bp | AACGACTCCGGCTGTATACCCACTGCTGTCACTTGCTaGCCTGTCCAAGGAGTGCTGCCGGACTGGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: NDSGCIPTAVTC*PVQGVLPDWGV Trigger: GACTCCCCAGTCCGGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS GCA 72 bp | CGAAACGACTCCGGCTGTATACCCACTGCTGTCACTTaGTGCCCTGTCCAAGGAGTGCTGCCGGACTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RNDSGCIPTAVT*CPVQGVLPDWG Trigger: TCCCCAGTCCGGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS GCA 72 bp | CACAAGAGGACTCTTCAGTGCCCCGACAGCCTCTGCTaGTGCCGAAGGCCGACTGTGTGCATCTGCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: HKRTLQCPDSLC*CRRPTVCICHE Trigger: CTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCGGGGCACTGAAGAGTCCTCTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 72 bp | AGGCACAAGAGGACTCTTCAGTGCCCCGACAGCCTCTaGTGCTGCCGAAGGCCGACTGTGTGCATCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RHKRTLQCPDSL*CCRRPTVCICH Trigger: ATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCTGTCGGGGCACTGAAGAGTCCTCTTGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS CCA 72 bp | ATGTCCTCTGGGTCCCGGCCTAGCCAGAGCCACAGGTaGCTTTTCCTCCATCCCACCTCAGGTGTATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: MSSGSRPSQSHR*LFLHPTSGVCS Trigger: GGAGCATACACCTGAGGTGGGATGGAGGAAAAGCCACCTGTGGCTCTGGCTAGGCCGGGACCCAGAGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CCA 72 bp | TTAGGAGTCATGCTCGGTTGCTGGAGGGGGCTGCCCTaGGGAAGAGGCCAGGACATTCCCCTTCTGTACCCT | + |
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Preference number: 6 (lower is better) Translates to: LGVMLGCWRGLP*GRGQDIPLLYP Trigger: AGGGTACAGAAGGGGAATGTCCTGGCCTCTTCCCCAGGGCAGCCCCCTCCAGCAACCGAGCATGACTCCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CAA 72 bp | ACGAAACGACTCCGGCTGTATACCCACTGCTGTCACTaGCTGCCCTGTCCAAGGAGTGCTGCCGGACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TKRLRLYTHCCH*LPCPRSAAGLG Trigger: CCCCAGTCCGGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTTTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS CAA 90 bp | AGTTGCCTCCATCTTGCCCGCGTACGCCCCTCCTTTTCTCCCGTCTaGCATCGCGCAGGCCTAAGGAGAGTGGATAAATGTCTCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SCLHLARVRPSFSPV*HRAGLRRVDKCLAA Trigger: GGCCGCGAGACATTTATCCACTCTCCTTAGGCCTGCGCGATGCAAGACGGGAGAAAAGGAGGGGCGTACGCGGGCAAGATGGAGGCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000292314.6 ENST00000425441.5 ENST00000446836.5 |
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| CDS TCA 72 bp | CTGCTGCTGCCGAAGGCCGACTGTGTGCATCTGCCATaGGATGGTAACAAAGGGTCCTGCCTGCAGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: LLLPKADCVHLP*DGNKGSCLQAQ Trigger: TTGGGCCTGCAGGCAGGACCCTTTGTTACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 72 bp | GGCGAAGAGAAACAGGACACACAGAAGCAGCGAGGATaGCAGGGTGGTCCAGGCACTCACCACCTCCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: GEEKQDTQKQRG*QGGPGTHHLLD Trigger: ATCGAGGAGGTGGTGAGTGCCTGGACCACCCTGGCATCCTCGCTGCTTCTGTGTGTCCTGTTTCTCTTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488069.5 ENST00000604367.1 |
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| CDS GCA 72 bp | AGCCTCTGCTGCTGCCGAAGGCCGACTGTGTGCATCTaGCATGAGATGGTAACAAAGGGTCCTGCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLCCCRRPTVCI*HEMVTKGPACR Trigger: CCTGCAGGCAGGACCCTTTGTTACCATCTCATGGCAGATGCACACAGTCGGCCTTCGGCAGCAGCAGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 72 bp | AGCCTGACCCAGAAGCAGTGGTCATATTGTAGGAGCTaGAGTGCAGCCCTCAGGACACGAGCAACACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SLTQKQWSYCRS*SAALRTRATPG Trigger: CCCGGGTGTTGCTCGTGTCCTGAGGGCTGCACTGCAGCTCCTACAATATGACCACTGCTTCTGGGTCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604181.1 |
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| CDS GCA 72 bp | GTGCAATTAAACAGAGAAGGCCTGTGGAAAACGCGCTaGCACTCTGCAGGGACACTGCCTACCGTGGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: VQLNREGLWKTR*HSAGTLPTVAP Trigger: GGGGGCCACGGTAGGCAGTGTCCCTGCAGAGTGGCAGCGCGTTTTCCACAGGCCTTCTCTGTTTAATTGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CCA 72 bp | CCTGGCCCCCAAAGACAGCGGTTGGCCTTGCTCAAATaGGAGCTCTGGAGCAGATGGGCTCTCAACCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PGPQRQRLALLK*ELWSRWALNLS Trigger: TGAGAGGTTGAGAGCCCATCTGCTCCAGAGCTCCCATTTGAGCAAGGCCAACCGCTGTCTTTGGGGGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS TCA 72 bp | TCCCCATCTTCCTTGTCCTATCTACACATCCCAAGGTaGGCAGGGTGGCGGAGCCAGGTGGGCAAAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: SPSSLSYLHIPR*AGWRSQVGKAT Trigger: GGTTGCTTTGCCCACCTGGCTCCGCCACCCTGCTCACCTTGGGATGTGTAGATAGGACAAGGAAGATGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604181.1 |
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| CDS CCA 72 bp | AAGAGGGGAGGGAACAGGGCAGACACTGAACAGAGTTaGGAGGACCCAGAGACTGGGAGACCGATGAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: KRGGNRADTEQS*EDPETGRPMSA Trigger: AGCACTCATCGGTCTCCCAGTCTCTGGGTCCTCCCAACTCTGTTCAGTGTCTGCCCTGTTCCCTCCCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460035.1 |
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| CDS CCA 72 bp | CAAAGACAGCGGTTGGCCTTGCTCAAATGGGAGCTCTaGAGCAGATGGGCTCTCAACCTCTCAGGAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: QRQRLALLKWEL*SRWALNLSGGP Trigger: AGGCCCTCCTGAGAGGTTGAGAGCCCATCTGCTCCAGAGCTCCCATTTGAGCAAGGCCAACCGCTGTCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CAA 90 bp | GATTTTTGCACGAAACGACTCCGGCTGTATACCCACTGCTGTCACTaGCTGCCCTGTCCAAGGAGTGCTGCCGGACTGGGGAGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: DFCTKRLRLYTHCCH*LPCPRSAAGLGSLS Trigger: AGACAGACTCCCCAGTCCGGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTTTCGTGCAAAAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS CCA 72 bp | AGAATGAGAGACTGGGAGGTCCTCGCAGGGCAGGTATaGAGCATAGGCTGGCAGGTTGTAGCTTTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RMRDWEVLAGQV*SIGWQVVALEA Trigger: GGCTTCCAAAGCTACAACCTGCCAGCCTATGCTCCATACCTGCCCTGCGAGGACCTCCCAGTCTCTCATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292314.6 |
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| CDS CAA 72 bp | CATCTTGCCCGCGTACGCCCCTCCTTTTCTCCCGTCTaGCATCGCGCAGGCCTAAGGAGAGTGGATAAATGT | + |
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Preference number: 6 (lower is better) Translates to: HLARVRPSFSPV*HRAGLRRVDKC Trigger: ACATTTATCCACTCTCCTTAGGCCTGCGCGATGCAAGACGGGAGAAAAGGAGGGGCGTACGCGGGCAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000292314.6 ENST00000425441.5 ENST00000446836.5 |
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| CDS TCA 72 bp | CCGAAACCCAGCATAAACCATCATTCCCTGTCCCACTaGGGCAGGGGGACTAGCATCACAAACCCACCCAAC | + |
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Preference number: 6 (lower is better) Translates to: PKPSINHHSLSH*GRGTSITNPPN Trigger: GTTGGGTGGGTTTGTGATGCTAGTCCCCCTGCCTCAGTGGGACAGGGAATGATGGTTTATGCTGGGTTTCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS GCA 72 bp | GATTTTTGCACGAAACGACTCCGGCTGTATACCCACTaGTGTCACTTGCTGCCCTGTCCAAGGAGTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DFCTKRLRLYTH*CHLLPCPRSAA Trigger: GGCAGCACTCCTTGGACAGGGCAGCAAGTGACAGCAGTGGGTATACAGCCGGAGTCGTTTCGTGCAAAAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492819.1 |
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| CDS CCA 72 bp | AGCAGCAAGTGGAATTCAGACCTCGCAGGGCAGGTATaGAGCATAGGCTGGCAGGTTGTAGCTTTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSKWNSDLAGQV*SIGWQVVALEA Trigger: GGCTTCCAAAGCTACAACCTGCCAGCCTATGCTCCATACCTGCCCTGCGAGGTCTGAATTCCACTTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425441.5 |
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| CDS GCA 72 bp | TGCATCTGCCATGAGATGGTAACAAAGGGTCCTGCCTaGAGGCCCAACTCCTGTCCTGGTACTGCTGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: CICHEMVTKGPA*RPNSCPGTAGY Trigger: ATAACCAGCAGTACCAGGACAGGAGTTGGGCCTGCAGGCAGGACCCTTTGTTACCATCTCATGGCAGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494655.5 ENST00000604164.5 |
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| CDS TCA 72 bp | CCCATGACCACATCCACTTCTCAGCCAGGAGTCCTCTaGGAGGATGTGGCCTTTTTCAAACCCCACTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: PMTTSTSQPGVL*EDVAFFKPHSD Trigger: ATCTGAGTGGGGTTTGAAAAAGGCCACATCCTCTCAGAGGACTCCTGGCTGAGAAGTGGATGTGGTCATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494655.5 |
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| CDS GCA 72 bp | AGGCTAGATGGTCCAGGCAGAGCTTCACATGCCAAGTaGAGAAGGGGCACTTACTCAGTAGGCAATGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: RLDGPGRASHAK*RRGTYSVGNGE Trigger: TTCTCCATTGCCTACTGAGTAAGTGCCCCTTCTGCACTTGGCATGTGAAGCTCTGCCTGGACCATCTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460035.1 |
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| CDS GCA 72 bp | TTGGATGAGGCTAGATGGTCCAGGCAGAGCTTCACATaGCAAGTGCAGAAGGGGCACTTACTCAGTAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LDEARWSRQSFT*QVQKGHLLSRQ Trigger: TTGCCTACTGAGTAAGTGCCCCTTCTGCACTTGGCATGTGAAGCTCTGCCTGGACCATCTAGCCTCATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460035.1 |
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| CDS TCA 72 bp | GGAAAGGAGGCAGAGAAGGCCTCGACAAGGGCCTTCTaGGATGTTGAGATTTTAAGGTCTGAACAGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: GKEAEKASTRAF*DVEILRSEQDS Trigger: GCTGTCCTGTTCAGACCTTAAAATCTCAACATCTCAGAAGGCCCTTGTCGAGGCCTTCTCTGCCTCCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460035.1 |
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| CDS CCA 72 bp | GAAGTGCACAAGCACTCAGCCCATTCTCTCTGGCTCTaGGTTTCCCAGGACATATGCCCCATGCTTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: EVHKHSAHSLWL*VSQDICPMLLF Trigger: AAACAAAAGCATGGGGCATATGTCCTGGGAAACCCAGAGCCAGAGAGAATGGGCTGAGTGCTTGTGCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS TCA 72 bp | AAAAAGCTAAGGCTCGATTTATCCAACGCTGATCAGTaGAAGAGCAGCAAGTGGAATTCAGACCTCGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: KKLRLDLSNADQ*KSSKWNSDLAG Trigger: CCCTGCGAGGTCTGAATTCCACTTGCTGCTCTTTCACTGATCAGCGTTGGATAAATCGAGCCTTAGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425441.5 |
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| CDS GCA 72 bp | GCATGGATGCTGACAATAACTACAAGACCAGAGAGCTaGCTGGATACATACAAAGTGAGGACTGGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AWMLTITTRPES*LDTYKVRTGFS Trigger: TGAGAAGCCAGTCCTCACTTTGTATGTATCCAGGCAGCTCTCTGGTCTTGTAGTTATTGTCAGCATCCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CAA 72 bp | TGGCTCTGGGTTTCCCAGGACATATGCCCCATGCTTTaGTTTCATCAAATTAAAACAGCTGGTGTTAACTCG | + |
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Preference number: 6 (lower is better) Translates to: WLWVSQDICPML*FHQIKTAGVNS Trigger: CGAGTTAACACCAGCTGTTTTAATTTGATGAAACAAAAGCATGGGGCATATGTCCTGGGAAACCCAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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| CDS CAA 90 bp | CATTCTCTCTGGCTCTGGGTTTCCCAGGACATATGCCCCATGCTTTaGTTTCATCAAATTAAAACAGCTGGTGTTAACTCGACCAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: HSLWLWVSQDICPML*FHQIKTAGVNSTKN Trigger: ATTCTTGGTCGAGTTAACACCAGCTGTTTTAATTTGATGAAACAAAAGCATGGGGCATATGTCCTGGGAAACCCAGAGCCAGAGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604367.1 |
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