RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC116 (Homo sapiens)

Ensembl gene IDs: ENSG00000161180

Ensembl transcript IDs: ENST00000292779.4, ENST00000425975.1, ENST00000607942.5

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTaGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTC +
Preference number: 1 (lower is better)
Translates to: TLTEQGIEWLVGTSW*VTVAHVHGVADRGL
Trigger: GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR CCA 90 bp GCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATaGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGC +
Preference number: 1 (lower is better)
Translates to: ATLTEQGIEWLVGTS*WVTVAHVHGVADRG
Trigger: GCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR GCA 90 bp GTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTaGCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTG +
Preference number: 1 (lower is better)
Translates to: VIARPGFMGPHQLDP*PGGFHSAGQETLTL
Trigger: CAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
3UTR-3UTR CCA 90 bp GCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCAGGGGCCCCACGTCCACGGAGTaGCTGACCGAGGCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: AELLVGIQPVVTPALGRGPTSTE*LTEASS
Trigger: AGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGG...GCCCCTGCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR-3UTR CCA 90 bp GTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCCATGGTGGGTCACCGTaGCCCACGTCCACGGAGTGG +
Preference number: 2 (lower is better)
Translates to: VSAELLVGIQPVVTPALGHGGSP*PTSTEW
Trigger: CCACTCCGTGGACGTGGGCCACGGTGACCCACCATG...GCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR-3UTR TCA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGCGTCCACGGAGTGGCTaGCCGAGGCCTCCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVRPRSG*PRPPLQ
Trigger: CTGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACG...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR-3UTR TCA 90 bp GTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCGATGTGCAGCAACTCTaGCAGAGCAGGGAATCGAGT +
Preference number: 2 (lower is better)
Translates to: VSAELLVGIQPVVTPALGDVQQL*QSRESS
Trigger: ACTCGATTCCCTGCTCTGTCAGAGTTGCTGCACATC...GCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR CCA 72 bp CTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTaGCTGACCGAGGCCTCCTCTCCAGGCTCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: LHGGSPWPTSTE*LTEASSPGSGR
Trigger: CCTCCCAGAGCCTGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR CCA 72 bp GAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTaGGTCACCGTGGCCCACGTCCACGGAGTGGCTGAC +
Preference number: 3 (lower is better)
Translates to: EQGIEWLVGTSW*VTVAHVHGVAD
Trigger: GTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
3UTR GCA 72 bp AGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTaGCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACC +
Preference number: 3 (lower is better)
Translates to: RPGFMGPHQLDP*PGGFHSAGQET
Trigger: GGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp CTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTGGGCTCCAAAGGGCTaGGCTGCCGGCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHGGSPWPTSTEWLTEASWAPKG*AAGWLA
Trigger: TGCCAGCCAGCCGGCAGCTCAGCCCTTTGGAGCCCA...GGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGCTGGGCCGGGCATGTaGCCGCCGTCCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: VGTSWWVTVAHVHGVADRAGPGM*PPSTTW
Trigger: CCAAGTGGTGGACGGCGGGCACATGCCCGGCCCAGC...TCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp GTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCCGTCCACGGAGTGGCTaGCCGAGGCCTCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VASGDFMVGHRGPRPRSGRPRSG*PRPPLQ
Trigger: CTGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACG...GCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCACCAGGAAGTTCAGCGTaGGATGGGGCTCACGGAGCG +
Preference number: 4 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPPGSSA*DGAHGA
Trigger: CGCTCCGTGAGCCCCATCGCACGCTGAACTTCCTGG...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCACCTGGGCAGTGTGGGTaGCTGGTTCCTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPPGQCG*LVPAAQ
Trigger: CTGTGCAGCAGGAACCAGCCACCCACACTGCCCAGG...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp GAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGCCGGTGTACGGTGCTaGGGCTGGGCCGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: EQGIEWLVGTSWWVTVAHAGVRC*GWAGHV
Trigger: CACATGCCCGGCCCAGCCTCAGCACCGTACACCGGC...GTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCAGCATTCAGCCTGTGGTaGCTCCTGCTCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPAFSLW*LLLLAG
Trigger: CCCTGCCAAGAGCAGGAGTCACCACAGGCTGAATGC...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCCTGGCGTGGGCAGGGTaGGGTGCAGGCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSLAWAG*GAGPAR
Trigger: CCTGGCAGGGCCTGCACCTCACCCTGCCCACGCCAG...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCATGTTGGGGTGTCCAGTaGAGAGGGTCGGCCGTACAC +
Preference number: 4 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPCWGVQ*RGSAVH
Trigger: GTGTACGGCCGACCCTCTGCACTGGACACCCCAACA...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCATGCACATGGAGTGGCTaGCCTCGTCATCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPCTWSG*PRHRPG
Trigger: ACCTGGCCGATGACGAGGCCAGCCACTCCATGTGCA...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCGCACTGCACATGGAGTaGCTGGCCTCGTCATCGGCC +
Preference number: 4 (lower is better)
Translates to: LHGGSPWPTSTEWLTEASALHME*LASSSA
Trigger: GGCCGATGACGAGGCCAGCCACTCCATGTGCAGTGC...GGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp TCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCAGGCTCTTCTGTGGCCTGGTCCTaGGCAGTGTGGGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPWPTSTEWLTEASSPGSSVAWS*AVWVAG
Trigger: ACCAGCCACCCACACTGCCCAGGACCAGGCCACAGA...AGAGCCTGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTGGTCACCTGGCAGGTaGCCGGGCCTGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTWSPGR*PGLLPT
Trigger: GGTGGGCAGCAGGCCCGGTCACCTGCCAGGTGACCA...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGCCGGTGTACGGTGCTaGGGCTGGGCCGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSAGVRC*GWAGHV
Trigger: CACATGCCCGGCCCAGCCTCAGCACCGTACACCGGC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp ACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCGGTGACCGGGCCTGCTaGCCACCTCTCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TSWWVTVAHVHGVADRGLGDRAC*PPLSSA
Trigger: AGCTGAAGAGAGAGGTGGGCAGCAGGCCCGGTCACC...GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGCTGGGCCGGGCATGTaGCCGCCGTCCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSAGPGM*PPSTTW
Trigger: CCAAGTGGTGGACGGCGGGCACATGCCCGGCCCAGC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp ACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCTGTGGATGGTGGGTGTaGCACACGGCCCGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: TSWWVTVAHVHGVADRGLCGWWV*HTARLA
Trigger: TGCAAGCCGGGCCGTGTGCCACACCCACCATCCACA...GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCAGGGGCGCCACATGTGGATGGTaGGTGTGGCACACGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AELLVGIQPVVTPALGRGATCGW*VWHTAR
Trigger: CCGGGCCGTGTGCCACACCCACCATCCACATGTGGC...GCCCCTGCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCCGGCCGTCGCGGCAGTaGGCGCCACGGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSRPSRQ*APRSLS
Trigger: GGATAAGCTCCGTGGCGCCCACTGCCGCGACGGCCG...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCAGCTCTTGGCAGGGGCTaGTGTGATGTGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPALGRG*CDVQQL
Trigger: GAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGC...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACAGGGCCCCTGAGGTaGCCCTGGCTGCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSTGPLR*PWLQAT
Trigger: GGTGGCCTGCAGCCAGGGCCACCTCAGGGGCCCTGT...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp ACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCGGGAGCAGGACTGACTaGGGCCTTTCCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TSWWVTVAHVHGVADRGLGSRTD*GLSLPS
Trigger: AGAGGGAAGGGAAAGGCCTCAGTCAGTCCTGCTCCC...GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCCCCGTGCACTGCACATaGAGTGGCTGGCCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: VASGDFMVGHRGPRPRSGPVHCT*SGWPRH
Trigger: ATGACGAGGCCAGCCACTCCATGTGCAGTGCACGGG...GCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp ACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCAAGTTCAGCGTGCGATaGGGCTCACGGAGCGGACAG +
Preference number: 4 (lower is better)
Translates to: TSWWVTVAHVHGVADRGLKFSVR*GSRSGQ
Trigger: CTGTCCGCTCCGTGAGCCCCATCGCACGCTGAACTT...GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCAGGGGCTGGGCTCCAAGCTGGTaGGGAACAGAGGACGGCCGT +
Preference number: 4 (lower is better)
Translates to: AELLVGIQPVVTPALGRGWAPSW*GTEDGR
Trigger: ACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCA...GCCCCTGCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCAATCTGGTGGCCACCTaGGCACTAGACATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LHGGSPWPTSTEWLTEASNLVAT*ALDMEG
Trigger: CCCCTCCATGTCTAGTGCCCAGGTGGCCACCAGATT...GGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCACCCCTGAGGTGGCCCTaGCTGCAGGCCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPPLRWP*LQATST
Trigger: GGTGGAGGTGGCCTGCAGCCAGGGCCACCTCAGGGG...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp GTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGCTGTAGCAGCCGCTTaGGGTTCTTCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VGTSWWVTVAHVHGVADRAVAAA*GSSPAG
Trigger: TCCTGCTGGAGAAGAACCTCAAGCGGCTGCTACAGC...TCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp GTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGATGCTCCTGTGTCCACTaGAAGCTGGTCTGGCTACCC +
Preference number: 4 (lower is better)
Translates to: VGTSWWVTVAHVHGVADRCSCVH*KLVWLP
Trigger: GGGTAGCCAGACCAGCTTTCAGTGGACACAGGAGCA...TCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp TCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCAGGCTCTAGGCGGTTGGAGAAGTaGGACATGCTGGACTTCGAC +
Preference number: 4 (lower is better)
Translates to: SPWPTSTEWLTEASSPGSRRLEK*DMLDFD
Trigger: GTCGAAGTCCAGCATGTCTCACTTCTCCAACCGCCT...AGAGCCTGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGCACACGGCCCGGCTTaGAGGCTGGCCGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSAHGPA*RLAAFL
Trigger: CAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp AATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGTGGCTGACCACGCTTTaGAGGGCAGGGAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NRVASGDFMVGHRGPRPRWLTTL*RAGKRR
Trigger: CCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCA...CCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCGGCCATGTGGTCACCTaGCAGGTGACCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGGHVVT*QVTGPA
Trigger: AGCAGGCCCGGTCACCTGCCAGGTGACCACATGGCC...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGGCCATGTGGTCACCTaGCAGGTGACCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSGHVVT*QVTGPA
Trigger: AGCAGGCCCGGTCACCTGCCAGGTGACCACATGGCC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCAGGGGCGGCTGGCCGCATTTCTaGGACCAGTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AELLVGIQPVVTPALGRGGWPHF*DQWLLG
Trigger: CCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCC...GCCCCTGCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp ACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCGGCTGCTATGGCAGTTaGACATGGAGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSWWVTVAHVHGVADRGLGCYGS*TWSWSW
Trigger: CCAGCTCCAGCTCCATGTCCAACTGCCATAGCAGCC...GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp TCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCAGGCTCTTCGCTTGCGGAAGATTaGCTCCTGTTCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPWPTSTEWLTEASSPGSSLAED*LLFSRP
Trigger: AGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGA...AGAGCCTGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAATTGGTGGGTTTAGCTaGCTCAGAGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VGTSWWVTVAHVHGVADRIGGFS*LRAQRR
Trigger: CCGCCTCTGGGCTCTGAGCCAGCTAAACCCACCAAT...TCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCCACGTCCACGGAGTaGCTGACCGAGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGPTSTE*LTEASS
Trigger: AGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGG...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCCAGGTGCCTCCTCCCTaGAGTGGAGTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTQVPPP*SGVRGW
Trigger: CCAGCCCCTCACTCCACTCCAGGGAGGAGGCACCTG...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGTGGTCACCTGGCAGGTaGCCGGGCCTGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVWSPGR*PGLLPT
Trigger: GGTGGGCAGCAGGCCCGGTCACCTGCCAGGTGACCA...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp ACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCTCCAGGCCTCGGCTCTaGTGCTTCAGGCACGCCAGA +
Preference number: 4 (lower is better)
Translates to: TEQGIEWLVGTSWWVTVASRPRL*CFRHAR
Trigger: TCTGGCGTGCCTGAAGCATCAGAGCCGAGGCCTGGA...GGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp AATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGTATCCACAGCCTGGCTaGCCACGCTTTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NRVASGDFMVGHRGPRPRYPQPG*PRFAGQ
Trigger: CTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATA...CCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp ACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCTTTCACTGGCTCCCTTaGGAGTCTCAGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSWWVTVAHVHGVADRGLFHWLP*ESQQSS
Trigger: GGAGCTCTGCTGAGACTCTCAAGGGAGCCAGTGAAA...GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCGCAGGTGACCGGGCCTaGTGCCCACCTCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGAGDRA*CPPLSS
Trigger: TGAAGAGAGAGGTGGGCAGCAGGCCCGGTCACCTGC...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCGGGCAGCTGCACCCGTaGACTGCACATGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGGQLHP*TAHGVA
Trigger: AGCCACTCCATGTGCAGTGCACGGGTGCAGCTGCCC...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGGGCAGCTGCACCCGTaGACTGCACATGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSGQLHP*TAHGVA
Trigger: AGCCACTCCATGTGCAGTGCACGGGTGCAGCTGCCC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCACCTCCACTGGGTCCTaGACCTCCACAAGCGGCACC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTTSTGS*TSTSGT
Trigger: GGTGCCGCTTGTGGAGGTGCAGGACCCAGTGGAGGT...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTGGCTGACCACGCTTTaGAGGGCAGGGAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTWLTTL*RAGKRR
Trigger: CCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCA...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGACTGAGCCGGGAGGCCTaGCGGGCCCTTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRLSREA*RALLDS
Trigger: GGAGTCCAAAAGGGCCCGGCAGGCCTCCCGGCTCAG...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAGGAGCAGCTGCACAGTaGGAGGAAGTCGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPGAAAQ*EEVGWR
Trigger: CCGCCAGCCGACTTCCTCGCACTGTGCAGCTGCTCC...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAGCCCGGCTTGCAGGCTaGCCGCATTTCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPARLAG*PHFWDQ
Trigger: CTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGC...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCGCTGCCACATGTGGATaGTGGGTGTGGCACACGGCC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTAATCG*WVWHTA
Trigger: GGCCGTGTGCCACACCCACCATCCACATGTGGCAGC...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACAGCCTCCGTCTTCATaGCAGCCATGCGCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: GNRVASGDFMVGHRGPRPQPPSS*QPCAQS
Trigger: CGACTGAGCGCATGGCTGCCATGAAGACGGAGGCTG...TGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGCGGCCGTCGCGGCAGTaGGCGCCACGGAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVRPSRQ*APRSLS
Trigger: GGATAAGCTCCGTGGCGCCCACTGCCGCGACGGCCG...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCGCGGCAGATCTGAGGTaGGCTCCAAGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSAELLVGIQPVVTPALGAADLR*APSWWG
Trigger: TCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGC...GCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCGCGGCAGATCTGAGGTaGGCTCCAAGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTAADLR*APSWWG
Trigger: TCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGC...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCAGAGCTGCCGGCTGGCTaGCAAGTTGGTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GNRVASGDFMVGHRGPRPELPAG*QVGVEG
Trigger: TCCCTCTACACCAACTTGCCAGCCAGCCGGCAGCTC...TGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCCTCCACCACAATCCCTaGCGTGGGCAGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTLHHNP*RGQGEV
Trigger: CACCTCACCCTGCCCACGCCAGGGATTGTGGTGGAG...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCGGGAGCAGGACTGACTaGGGCCTTTCCCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTGSRTD*GLSLPS
Trigger: AGAGGGAAGGGAAAGGCCTCAGTCAGTCCTGCTCCC...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp ACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCTCTGGGAGCAGGACTaGCTGAGGCCTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TEQGIEWLVGTSWWVTVALWEQD*LRPFPS
Trigger: GGAAGGGAAAGGCCTCAGTCAGTCCTGCTCCCAGAG...GGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCCTCTGGGAGCAGGACTaGCTGAGGCCTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTLWEQD*LRPFPS
Trigger: GGAAGGGAAAGGCCTCAGTCAGTCCTGCTCCCAGAG...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCATCCAGGCCTCGGCTCTaGTGCTTCAGGCACGCCAGA +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPSRPRL*CFRHAR
Trigger: TCTGGCGTGCCTGAAGCATCAGAGCCGAGGCCTGGA...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCTATCCACAGCCTGGCTaGCCACGCTTTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSYPQPG*PRFAGQ
Trigger: CTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATA...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAGCAGGTGACCGGGCCTaGTGCCCACCTCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPAGDRA*CPPLSS
Trigger: TGAAGAGAGAGGTGGGCAGCAGGCCCGGTCACCTGC...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp AGTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGACCTCCACTGGGTCCTaGACCTCCACAAGCGGCACC +
Preference number: 4 (lower is better)
Translates to: SLSRAPRGHSACGDSCSWTSTGS*TSTSGT
Trigger: GGTGCCGCTTGTGGAGGTGCAGGACCCAGTGGAGGT...CCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGAGTCGGCCGTACACGGTaGCGGTGTACGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRVGRTR*RCTVLR
Trigger: CCTCAGCACCGTACACCGGCACCGTGTACGGCCGAC...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCACCAGGAAGTTCAGCGTaGGATGGGGCTCACGGAGCG +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPPGSSA*DGAHGA
Trigger: CGCTCCGTGAGCCCCATCGCACGCTGAACTTCCTGG...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCCCCGTGCACTGCACATaGAGTGGCTGGCCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSPVHCT*SGWPRH
Trigger: ATGACGAGGCCAGCCACTCCATGTGCAGTGCACGGG...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGGCTGGCCGCATTTCTaGGACCAGTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSGWPHF*DQWLLG
Trigger: CCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGAGCCCGGCTTGCAGGCTaGCCGCATTTCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRARLAG*PHFWDQ
Trigger: CTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGC...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCATGTGGATGGTGGGTGTaGCACACGGCCCGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPCGWWV*HTARLA
Trigger: TGCAAGCCGGGCCGTGTGCCACACCCACCATCCACA...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGTTTCGGCGTTGGCCCTaGAGTGCTGAGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: NRVASGDFMVGHRGPRPRFRRWP*SAELPH
Trigger: ATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAA...CCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCCAGCCTCCGTCTTCATaGCAGCCATGCGCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSQPPSS*QPCAQS
Trigger: CGACTGAGCGCATGGCTGCCATGAAGACGGAGGCTG...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCAAGTTCAGCGTGCGATaGGGCTCACGGAGCGGACAG +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTKFSVR*GSRSGQ
Trigger: CTGTCCGCTCCGTGAGCCCCATCGCACGCTGAACTT...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCGCAGGGAAGAGGCGGTaGTCAGCCAGGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTAGKRR*SARKFS
Trigger: GCTGAACTTCCTGGCTGACCACCGCCTCTTCCCTGC...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCATGGGCTCCAAGCTGGTaGGGAACAGAGGACGGCCGT +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPWAPSW*GTEDGR
Trigger: ACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCA...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTGCTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCATGGTGGGTCACCGTaGCCCACGTCCACGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLAGAGVMCSNSDRAGNHGGSP*PTSTEW
Trigger: CCACTCCGTGGACGTGGGCCACGGTGACCCACCATG...ATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGTAGGGGGAGGAAAGTaGAGGTGTGACAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSVGGGK*RCDRAP
Trigger: AGGGGCCCTGTCACACCTCCACTTTCCTCCCCCTAC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTGCTCCTGTGTCCACTaGAAGCTGGTCTGGCTACCC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTCSCVH*KLVWLP
Trigger: GGGTAGCCAGACCAGCTTTCAGTGGACACAGGAGCA...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp TCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCAGGCTCTACCTCTCTCTTCAGCTaGGCATTCCTCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SPWPTSTEWLTEASSPGSTSLFS*AFLSET
Trigger: TGTTTCTGAGAGGAATGCGCAGCTGAAGAGAGAGGT...AGAGCCTGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp AACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACGCACACGGCCCGGCTTaGAGGCTGGCCGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: NSDRAGNRVASGDFMVGHAHGPA*RLAAFL
Trigger: CAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGC...GTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp ACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCCTGGAGTGCTGAGCTaGCACATGTGGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TEQGIEWLVGTSWWVTVAPGVLS*HMWMVG
Trigger: ACCCACCATCCACATGTGGCAGCTCAGCACTCCAGG...GGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAGTCGGCCGTACACGGTaGCGGTGTACGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLVGRTR*RCTVLR
Trigger: CCTCAGCACCGTACACCGGCACCGTGTACGGCCGAC...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp GAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACCCGAGGACAGGTGGATaGGGGAGCCTTTTACCTTCT +
Preference number: 4 (lower is better)
Translates to: EQGIEWLVGTSWWVTVAHPRTGG*GSLLPS
Trigger: AGAAGGTAAAAGGCTCCCGCATCCACCTGTCCTCGG...GTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCATGCACATGGAGTGGCTaGCCTCGTCATCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPCTWSG*PRHRPG
Trigger: ACCTGGCCGATGACGAGGCCAGCCACTCCATGTGCA...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAGCCACATGTGGATGGTaGGTGTGGCACACGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLATCGW*VWHTAR
Trigger: CCGGGCCGTGTGCCACACCCACCATCCACATGTGGC...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCCTGAGCTGCCACATGTaGATGGTGGGTGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSLSCHM*MVGVAH
Trigger: GTGTGCCACACCCACCATCCACATGTGGCAGCTCAG...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACTGGATGGGTAGTTGTTaGGGTGTCCAGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: EQGIEWLVGTSWWVTVAHWMGSC*GVQCRG
Trigger: CCCTCTGCACTGGACACCCCAACAACTACCCATCCA...GTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCGGTGGCAATGAGCCTTaGGCACCTAGGTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGGGNEP*APRSLS
Trigger: GGACAGTGACCTAGGTGCCCAAGGCTCATTGCCACC...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCATTGGTGGGTTTAGCTaGCTCAGAGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTIGGFS*LRAQRR
Trigger: CCGCCTCTGGGCTCTGAGCCAGCTAAACCCACCAAT...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTGCTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATTGGTCCTGGGCAGTGTaGGTGGCTGGTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLAGAGVMCSNSDRAGNWSWAV*VAGSCC
Trigger: GCAGCAGGAACCAGCCACCCACACTGCCCAGGACCA...ATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGAGGCTGGCTGGCAAGTTaGTGTAGAGGGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRGWLAS*CRGSGR
Trigger: CCTGCCGCTCCCTCTACACCAACTTGCCAGCCAGCC...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp ACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCCATGTCCTTGGACTTaGGGGGACTGGAACCCATGC +
Preference number: 4 (lower is better)
Translates to: TEQGIEWLVGTSWWVTVAPCPWT*GDWNPC
Trigger: GCATGGGTTCCAGTCCCCCCAAGTCCAAGGACATGG...GGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAAGTGGAGTGAGGGGCTaGGGACATTGGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPSGVRG*GHWASP
Trigger: CGGAGAAGCCCAATGTCCCCAGCCCCTCACTCCACT...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGATTGGCCCTGGAGTGCTaGGCTGCCACATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRLALEC*AATCGW
Trigger: CCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAA...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAGCTGTAGCAGCCGCTTaGGGTTCTTCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPAVAAA*GSSPAG
Trigger: TCCTGCTGGAGAAGAACCTCAAGCGGCTGCTACAGC...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp AATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGCCCAGCTGCTTACTaGGGTCCTTTTCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: NRVASGDFMVGHRGPRPRSPAAY*GPFRTR
Trigger: ACGAGTTCGAAAAGGACCTCAGTAAGCAGCTGGGCT...CCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAGCCCGGTCCTACTTTTaGGGAGGTCACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPARSYF*GGHLWT
Trigger: TGTCCAGAGGTGACCTCCTCAAAAGTAGGACCGGGC...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp ACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCTCAGAAACACCGCCTTaGTCCGCACAGGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: TEQGIEWLVGTSWWVTVASETPP*SAQAST
Trigger: TGTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGA...GGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCTCAGAAACACCGCCTTaGTCCGCACAGGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSSETPP*SAQAST
Trigger: TGTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGA...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCACCTGGAGTGCTGAGCTaGCACATGTGGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPPGVLS*HMWMVG
Trigger: ACCCACCATCCACATGTGGCAGCTCAGCACTCCAGG...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTACCAAGGAGGCTGCCTaGTGGGTCAGGAAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGTKEAA*WVRKSA
Trigger: CGCCGACTTCCTGACCCAGCAGGCAGCCTCCTTGGT...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCTGGAACCCATGCCGGTaGAGGCAGACATGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGWNPCR*RQTCRA
Trigger: AGCTCTACATGTCTGCCTGCACCGGCATGGGTTCCA...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTGCCTGTGGTGACTCCTaGTCTTGGCAGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGACGDS*SWQGLV
Trigger: CACCAGCCCCTGCCAAGAGCAGGAGTCACCACAGGC...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCCATCAGCTTGACCCCTaGCCAGGAGGTTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTHQLDP*PGGFHS
Trigger: ACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTGATG...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTGCTGCCACATGTGGATaGTGGGTGTGGCACACGGCC +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGAATCG*WVWHTA
Trigger: GGCCGTGTGCCACACCCACCATCCACATGTGGCAGC...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCACTCTTGTTTCGGCGTTaGCCCTGGAGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPLLFRR*PWSAEL
Trigger: CAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAG...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAGGCTGCTATGGCAGTTaGACATGGAGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPGCYGS*TWSWSW
Trigger: CCAGCTCCAGCTCCATGTCCAACTGCCATAGCAGCC...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGCCATGAGGCTGCTATaGCAGTTGGACATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSAMRLL*QLDMEL
Trigger: CAGCTCCATGTCCAACTGCCATAGCAGCCTCATGGC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTCGCTTGCGGAAGATTaGCTCCTGTTCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTSLAED*LLFSRP
Trigger: AGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGA...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCAGCTTATCCACAGCCTaGCTGACCACGCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSSLSTA*LTTLCR
Trigger: CCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCT...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCATTCTCTGAAGCATCTTaGGGCTGGAGACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RAGNRVASGDFMVGHRGPFSEAS*GWRLWG
Trigger: GCCCCACAGTCTCCAGCCCCAAGATGCTTCAGAGAA...TGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCTTCTCTGAAGCATCTTaGGGCTGGAGACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSFSEAS*GWRLWG
Trigger: GCCCCACAGTCTCCAGCCCCAAGATGCTTCAGAGAA...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTGTGGGGACTTCATGGTaGGTCACCGTGGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGVGTSW*VTVAHV
Trigger: GACGTGGGCCACGGTGACCCACCATGAAGTCCCCAC...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp ACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCGAGCAGGGAATCGAGTaGCTAGTGGGGACTTCATGG +
Preference number: 4 (lower is better)
Translates to: TEQGIEWLVGTSWWVTVAEQGIE*LVGTSW
Trigger: CCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTC...GGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCATGCGAGGAAGTCGGCTaGCGGCCTCCACTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPCEEVG*RPPLAY
Trigger: ATAAGCAAGTGGAGGCCGCCAGCCGACTTCCTCGCA...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTACAGGGCTGGGCCCTCTaGCTGGAGCTCAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLQGWAL*LELRET
Trigger: TGTTTCCCTGAGCTCCAGCCAGAGGGCCCAGCCCTG...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTATTGGCCCTGGAGTGCTaGGCTGCCACATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLLALEC*AATCGW
Trigger: CCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAA...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp CTGCTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATAAGTGGCCAAAGGGCTaGGGGTGCCTCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLLAGAGVMCSNSDRAGNKWPKG*GCLLFR
Trigger: CCGAAACAAGAGGCACCCTCAGCCCTTTGGCCACTT...ATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGCGGCTTCTTCTTCGTaGACCTGCTGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVAASSS*TCCCCR
Trigger: CCTGCAGCAGCAGCAGGTTCACGAAGAAGAAGCCGC...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp CTGCTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATACTCGTACTTGCGGATaGCCAAGGAGGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLAGAGVMCSNSDRAGNTRTCG*PRRLPA
Trigger: AGCAGGCAGCCTCCTTGGTCATCCGCAAGTACGAGT...ATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTATGTTGGGGTGTCCAGTaGAGAGGGTCGGCCGTACAC +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLCWGVQ*RGSAVH
Trigger: GTGTACGGCCGACCCTCTGCACTGGACACCCCAACA...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGGGACTGGAACCCATaGCGGTGCAGGCAGACATGT +
Preference number: 4 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVGDWNP*RCRQTC
Trigger: ACATGTCTGCCTGCACCGGCATGGGTTCCAGTCCCC...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp AGTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGGGGGCTGGTGTGATGTaGAGCAACTCTGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLSRAPRGHSACGDSCSWGAGVM*SNSDRA
Trigger: TGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCC...CCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCAGGAGGTTTCCACAGTaGAGGGCAAGAGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTRRFPQ*RARDLD
Trigger: GTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCT...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGACTCTTGTTTCGGCGTTaGCCCTGGAGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRLLFRR*PWSAEL
Trigger: CAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAG...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCATGGATGGGTAGTTGTTaGGGTGTCCAGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPWMGSC*GVQCRG
Trigger: CCCTCTGCACTGGACACCCCAACAACTACCCATCCA...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp GGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCATCGAGGGACTCCAGCTaGCTCAGTAATGACTTGATC +
Preference number: 4 (lower is better)
Translates to: GNRVASGDFMVGHRGPRPSRDSS*LSNDLI
Trigger: GATCAAGTCATTACTGAGCCAGCTGGAGTCCCTCGA...TGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTGCAGGGAAGAGGCGGTaGTCAGCCAGGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGAGKRR*SARKFS
Trigger: GCTGAACTTCCTGGCTGACCACCGCCTCTTCCCTGC...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp AATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGAAGTGAGACATGCTaGACTTCGACGAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: NRVASGDFMVGHRGPRPRRSETC*TSTRWR
Trigger: CCTCCATCTCGTCGAAGTCCAGCATGTCTCACTTCT...CCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGCTAGTGGGGACTTCATaGTGGGTCACCGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVLVGTS*WVTVAH
Trigger: GTGGGCCACGGTGACCCACCATGAAGTCCCCACTAG...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAAGTCTGCGCCCTCACTaGAGCAGCTGCACAGTGCGA +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLSLRPH*SSCTVR
Trigger: TCGCACTGTGCAGCTGCTCCAGTGAGGGCGCAGACT...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR TCA 90 bp AGTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGGATGTGCAGCAACTCTaGCAGAGCAGGGAATCGAGT +
Preference number: 4 (lower is better)
Translates to: SLSRAPRGHSACGDSCSWDVQQL*QSRESS
Trigger: ACTCGATTCCCTGCTCTGTCAGAGTTGCTGCACATC...CCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCTGGAGAAGTGAGACATaGTGGACTTCGACGAGATGG +
Preference number: 4 (lower is better)
Translates to: VSAELLVGIQPVVTPALGWRSET*WTSTRW
Trigger: CCATCTCGTCGAAGTCCAGCATGTCTCACTTCTCCA...GCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCGAGAAGAAGCCCAGCTaGTTACTGAGGTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGEKKPS*LLRSFS
Trigger: CGAAAAGGACCTCAGTAAGCAGCTGGGCTTCTTCTC...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTCTCCTGCAAACTCATaGCCGGTCCTACTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTSPANS*PVLLLR
Trigger: CCTCAAAAGTAGGACCGGGCATGAGTTTGCAGGAGA...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGCTGAGCTGCCACATGTaGATGGTGGGTGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVLSCHM*MVGVAH
Trigger: GTGTGCCACACCCACCATCCACATGTGGCAGCTCAG...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTATTTCGGCGTTGGCCCTaGAGTGCTGAGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLFRRWP*SAELPH
Trigger: ATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAA...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AGTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGACATGGAGCTGGAGCTaGATGGGTAGTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLSRAPRGHSACGDSCSWTWSWS*MGSCWG
Trigger: ACCCCAACAACTACCCATCCAGCTCCAGCTCCATGT...CCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAACATGGAGCTGGAGCTaGATGGGTAGTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPTWSWS*MGSCWG
Trigger: ACCCCAACAACTACCCATCCAGCTCCAGCTCCATGT...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAGGTGGCAATGAGCCTTaGGCACCTAGGTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLGGNEP*APRSLS
Trigger: GGACAGTGACCTAGGTGCCCAAGGCTCATTGCCACC...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTCGAGGGACTCCAGCTaGCTCAGTAATGACTTGATC +
Preference number: 4 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTSRDSS*LSNDLI
Trigger: GATCAAGTCATTACTGAGCCAGCTGGAGTCCCTCGA...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGAAGCTTATCCACAGCCTaGCTGACCACGCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRSLSTA*LTTLCR
Trigger: CCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCT...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAAATCTGGTGGCCACCTaGGCACTAGACATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLNLVAT*ALDMEG
Trigger: CCCCTCCATGTCTAGTGCCCAGGTGGCCACCAGATT...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACGTCTCCGAGGACAGGTaGATGCGGGAGCCTTTTACC +
Preference number: 4 (lower is better)
Translates to: NSDRAGNRVASGDFMVGHVSEDR*MREPFT
Trigger: GGTAAAAGGCTCCCGCATCCACCTGTCCTCGGAGAC...GTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCCTGCCGGGCCCTTTTaGACTCCTCCAGTTTACGCA +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGPAGPF*TPPVYA
Trigger: TGCGTAAACTGGAGGAGTCCAAAAGGGCCCGGCAGG...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTACTAGGCCAGGATTCATaGGCCCCCATCAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLLGQDS*APISLT
Trigger: GGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAG...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR GCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAAAGGAGCCCTTCTCCTaGAAACTCATGCCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLKEPFS*KLMPGP
Trigger: AGGACCGGGCATGAGTTTGCAGGAGAAGGGCTCCTT...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTGCTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATAGGCTGTCCAGGACCTaGCTCTCAGTTAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: LLLAGAGVMCSNSDRAGNRLSRT*LSVRKS
Trigger: GGATTTCCTAACTGAGAGCCAGGTCCTGGACAGCCT...ATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTGCCATGAGGCTGCTATaGCAGTTGGACATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGAMRLL*QLDMEL
Trigger: CAGCTCCATGTCCAACTGCCATAGCAGCCTCATGGC...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTTGGACTTCGACGAGATaGAGGGCAGCGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGWTSTR*RAAASS
Trigger: AGAAGAAGCCGCTGCCCTCCATCTCGTCGAAGTCCA...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR GCA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCAACCTCTCTCTTCAGCTaGGCATTCCTCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPTSLFS*AFLSET
Trigger: TGTTTCTGAGAGGAATGCGCAGCTGAAGAGAGAGGT...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAAGGCTGTCCAGGACCTaGCTCTCAGTTAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLRLSRT*LSVRKS
Trigger: GGATTTCCTAACTGAGAGCCAGGTCCTGGACAGCCT...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTGTGTCCACTGAAAGCTaGTCTGGCTACCCAGCGAAT +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGVSTES*SGYPAN
Trigger: ATTCGCTGGGTAGCCAGACCAGCTTTCAGTGGACAC...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAGTGTCCACTGAAAGCTaGTCTGGCTACCCAGCGAAT +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLVSTES*SGYPAN
Trigger: ATTCGCTGGGTAGCCAGACCAGCTTTCAGTGGACAC...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp AGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCCTCATAAAGGCGGTTaGAGAAGTGAGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: SNSDRAGNRVASGDFMVGPHKGG*RSETCW
Trigger: CCAGCATGTCTCACTTCTCCAACCGCCTTTATGAGG...ACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR TCA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGCCTTTATTTATCTGTaGCAACACCTGGTAATAGCT +
Preference number: 4 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSAFIYL*QHLVIA
Trigger: AGCTATTACCAGGTGTTGTCACAGATAAATAAAGGC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CCA 90 bp CTGCTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATTCCTTGTCCTCATCCTaGTCTTCATCCTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: LLLAGAGVMCSNSDRAGNSLSSS*SSSLNS
Trigger: TGAGTTCAAGGATGAAGACCAGGATGAGGACAAGGA...ATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CCA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAGTGGGTTTTGTAATTTaGGATCTGAGTCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLVGFVI*DLSQVP
Trigger: AGGCACCTGACTCAGATCCCAAATTACAAAACCCAC...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS TCA 90 bp GTCCAGTGCAGAGGGTCGGCCGTACACGGTGCCGGTGTACGGTGCTaGGGCTGGGCCGGGCATGTGCCCGCCGTCCACCACTTGGCACCT +
Preference number: 5 (lower is better)
Translates to: VQCRGSAVHGAGVRC*GWAGHVPAVHHLAP
Trigger: AGGTGCCAAGTGGTGGACGGCGGGCACATGCCCGGCCCAGCCTCAGCACCGTACACCGGCACCGTGTACGGCCGACCCTCTGCACTGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS GCA 90 bp CCGTACACGGTGCCGGTGTACGGTGCTGAGGCTGGGCCGGGCATGTaGCCGCCGTCCACCACTTGGCACCTCCACTGGGTCCTGCACCTC +
Preference number: 5 (lower is better)
Translates to: PYTVPVYGAEAGPGM*PPSTTWHLHWVLHL
Trigger: GAGGTGCAGGACCCAGTGGAGGTGCCAAGTGGTGGACGGCGGGCACATGCCCGGCCCAGCCTCAGCACCGTACACCGGCACCGTGTACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 90 bp TACGGTGCTGAGGCTGGGCCGGGCATGTGCCCGCCGTCCACCACTTaGCACCTCCACTGGGTCCTGCACCTCCACAAGCGGCACCCCAGC +
Preference number: 5 (lower is better)
Translates to: YGAEAGPGMCPPSTT*HLHWVLHLHKRHPS
Trigger: GCTGGGGTGCCGCTTGTGGAGGTGCAGGACCCAGTGGAGGTGCCAAGTGGTGGACGGCGGGCACATGCCCGGCCCAGCCTCAGCACCGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 90 bp GGACGGCCGTCGCGGCAGTGGGCGCCACGGAGCTTATCCACAGCCTaGCTGACCACGCTTTGCAGGGCAGGGAAGAGGCGGTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GRPSRQWAPRSLSTA*LTTLCRAGKRRWSA
Trigger: GGCTGACCACCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCCCACTGCCGCGACGGCCGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 90 bp GCTCAGAGCCCAGAGGCGGCAGATCTGAGGTGGGCTCCAAGCTGGTaGGGAACAGAGGACGGCCGTCGCGGCAGTGGGCGCCACGGAGCT +
Preference number: 5 (lower is better)
Translates to: AQSPEAADLRWAPSW*GTEDGRRGSGRHGA
Trigger: AGCTCCGTGGCGCCCACTGCCGCGACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGCCTCTGGGCTCTGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 90 bp CTGGCTCAGAGCCCAGAGGCGGCAGATCTGAGGTGGGCTCCAAGCTaGTGGGGAACAGAGGACGGCCGTCGCGGCAGTGGGCGCCACGGA +
Preference number: 5 (lower is better)
Translates to: LAQSPEAADLRWAPS*WGTEDGRRGSGRHG
Trigger: TCCGTGGCGCCCACTGCCGCGACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGCCTCTGGGCTCTGAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS GCA 90 bp CGGGCATGTGCCCGCCGTCCACCACTTGGCACCTCCACTGGGTCCTaGACCTCCACAAGCGGCACCCCAGCCTCCGTCTTCATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RACARRPPLGTSTGS*TSTSGTPASVFMAA
Trigger: GGCTGCCATGAAGACGGAGGCTGGGGTGCCGCTTGTGGAGGTGCAGGACCCAGTGGAGGTGCCAAGTGGTGGACGGCGGGCACATGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 90 bp GTGGGCTCCAAGCTGGTGGGGAACAGAGGACGGCCGTCGCGGCAGTaGGCGCCACGGAGCTTATCCACAGCCTGGCTGACCACGCTTTGC +
Preference number: 5 (lower is better)
Translates to: VGSKLVGNRGRPSRQ*APRSLSTAWLTTLC
Trigger: GCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCCCACTGCCGCGACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 90 bp GCCACATGTGGATGGTGGGTGTGGCACACGGCCCGGCTTGCAGGCTaGCCGCATTTCTGGGACCAGTGGCTTCTTGGGCAGCTGCACCCG +
Preference number: 5 (lower is better)
Translates to: ATCGWWVWHTARLAG*PHFWDQWLLGQLHP
Trigger: CGGGTGCAGCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 90 bp GCCTCTTGTTTCGGCGTTGGCCCTGGAGTGCTGAGCTGCCACATGTaGATGGTGGGTGTGGCACACGGCCCGGCTTGCAGGCTGGCCGCA +
Preference number: 5 (lower is better)
Translates to: ASCFGVGPGVLSCHM*MVGVAHGPACRLAA
Trigger: TGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS-3UTR CAA 90 bp ACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCAGGCACGCCAGAGCTaGAGCCCAGCAGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: TSWWVTVAHVHGVADRGLQARQS*SPAALR
Trigger: TCTCAGGGCTGCTGGGCTCAAGCTCTGGCGTGCCTG...GAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS TCA 90 bp GCCATTGGTGGGTTTAGCTGGCTCAGAGCCCAGAGGCGGCAGATCTaGGGTGGGCTCCAAGCTGGTGGGGAACAGAGGACGGCCGTCGCG +
Preference number: 5 (lower is better)
Translates to: AIGGFSWLRAQRRQI*GGLQAGGEQRTAVA
Trigger: CGCGACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGCCTCTGGGCTCTGAGCCAGCTAAACCCACCAATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS GCA 90 bp GCTGAGGGTGCCTCTTGTTTCGGCGTTGGCCCTGGAGTGCTGAGCTaGCACATGTGGATGGTGGGTGTGGCACACGGCCCGGCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: AEGASCFGVGPGVLS*HMWMVGVAHGPACR
Trigger: CCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAGGCACCCTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS GCA 90 bp GAGGGTGTCTCTGTGCTGCAGTGGGAGGTGCTGAGCCGGGAGGCCTaGCGGGCCCTTTTGGACTCCTCCAGTTTACGCAGCAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: EGVSVLQWEVLSREA*RALLDSSSLRSRQL
Trigger: GAGCTGCCTGCTGCGTAAACTGGAGGAGTCCAAAAGGGCCCGGCAGGCCTCCCGGCTCAGCACCTCCCACTGCAGCACAGAGACACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 90 bp TGGTGGGTGTGGCACACGGCCCGGCTTGCAGGCTGGCCGCATTTCTaGGACCAGTGGCTTCTTGGGCAGCTGCACCCGTGCACTGCACAT +
Preference number: 5 (lower is better)
Translates to: WWVWHTARLAGWPHF*DQWLLGQLHPCTAH
Trigger: ATGTGCAGTGCACGGGTGCAGCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 90 bp CTGGGTCCTGCACCTCCACAAGCGGCACCCCAGCCTCCGTCTTCATaGCAGCCATGCGCTCAGTCGCCTTCTCCACCACTGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGPAPPQAAPQPPSS*QPCAQSPSPPLSPG
Trigger: GCCTGGAGACAGTGGTGGAGAAGGCGACTGAGCGCATGGCTGCCATGAAGACGGAGGCTGGGGTGCCGCTTGTGGAGGTGCAGGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 90 bp AACACCGCCTTGCTCCGCACAGGCCAGTACAGTCTGCGCCCTCACTaGAGCAGCTGCACAGTGCGAGGAAGTCGGCTGGCGGCCTCCACT +
Preference number: 5 (lower is better)
Translates to: NTALLRTGQYSLRPH*SSCTVRGSRLAAST
Trigger: AGTGGAGGCCGCCAGCCGACTTCCTCGCACTGTGCAGCTGCTCCAGTGAGGGCGCAGACTGTACTGGCCTGTGCGGAGCAAGGCGGTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425975.1
ENST00000607942.5
CDS-3UTR CAA 90 bp GCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCAGGGGCGGGACCAGTGGCTTCTaGGGCAGCTGCACCCGTGCA +
Preference number: 5 (lower is better)
Translates to: AELLVGIQPVVTPALGRGGTSGF*GSCTRA
Trigger: TGCACGGGTGCAGCTGCCCAAGAAGCCACTGGTCCC...GCCCCTGCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp GGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCAGGCACACGGCCCGGCTaGCAGGCTGGCCGCATTTCT +
Preference number: 5 (lower is better)
Translates to: GNRVASGDFMVGHRGPRPGTRPG*QAGRIS
Trigger: AGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCC...TGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS TCA 90 bp CCATGCCGGTGCAGGCAGACATGTAGAGCTTGGGCTCCAAAGGGCTaGGCTGCCGGCTGGCTGGCAAGTTGGTGTAGAGGGAGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: PCRCRQTCRAWAPKG*AAGWLASWCRGSGR
Trigger: CCTGCCGCTCCCTCTACACCAACTTGCCAGCCAGCCGGCAGCTCAGCCCTTTGGAGCCCAAGCTCTACATGTCTGCCTGCACCGGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS GCA 90 bp CTGAGCTGCCACATGTGGATGGTGGGTGTGGCACACGGCCCGGCTTaGAGGCTGGCCGCATTTCTGGGACCAGTGGCTTCTTGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LSCHMWMVGVAHGPA*RLAAFLGPVASWAA
Trigger: AGCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS GCA 90 bp GCACCTCCACAAGCGGCACCCCAGCCTCCGTCTTCATGGCAGCCATaGGCTCAGTCGCCTTCTCCACCACTGTCTCCAGGCTGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: APPQAAPQPPSSWQP*AQSPSPPLSPGCPG
Trigger: TCCTGGACAGCCTGGAGACAGTGGTGGAGAAGGCGACTGAGCGCATGGCTGCCATGAAGACGGAGGCTGGGGTGCCGCTTGTGGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS-3UTR CAA 90 bp GTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCCCCGCCGTCCACCACTaGGCACCTCCACTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: VSAELLVGIQPVVTPALGPAVHH*APPLGP
Trigger: AGGACCCAGTGGAGGTGCCAAGTGGTGGACGGCGGG...GCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CTTCATGGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCCAGGGGCTCTTGAGTTaGAATCTGGTGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LHGGSPWPTSTEWLTEASQGLLS*NLVATW
Trigger: CCAGGTGGCCACCAGATTCAAACTCAAGAGCCCCTG...GGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACCATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCACTTTCACTGGCTCCCTaGAGAGTCTCAGCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPLSLAP*RVSAEL
Trigger: GAGCTCTGCTGAGACTCTCAAGGGAGCCAGTGAAAG...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS TCA 90 bp AAAGGGCTGAGGGTGCCTCTTGTTTCGGCGTTGGCCCTGGAGTGCTaGGCTGCCACATGTGGATGGTGGGTGTGGCACACGGCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: KGLRVPLVSALALEC*AATCGWWVWHTARL
Trigger: AAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAGGCACCCTCAGCCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 90 bp AGACATGTAGAGCTTGGGCTCCAAAGGGCTGAGCTGCCGGCTGGCTaGCAAGTTGGTGTAGAGGGAGCGGCAGGGCTCTGTGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: RHVELGLQRAELPAG*QVGVEGAAGLCGLV
Trigger: GACCAGGCCACAGAGCCCTGCCGCTCCCTCTACACCAACTTGCCAGCCAGCCGGCAGCTCAGCCCTTTGGAGCCCAAGCTCTACATGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCCAGGCACGCCAGAGCTaGAGCCCAGCAGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTQARQS*SPAALR
Trigger: TCTCAGGGCTGCTGGGCTCAAGCTCTGGCGTGCCTG...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCGAGGGGCTGGGGACATaGGGCTTCTCCGTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTEGLGT*GFSVGV
Trigger: GACACCCACGGAGAAGCCCAATGTCCCCAGCCCCTC...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCTGGGCCCCCATCAGCTaGACCCCTGCCCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSWAPIS*TPAQEV
Trigger: AACCTCCTGGGCAGGGGTCAAGCTGATGGGGGCCCA...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS GCA 90 bp GCACAGGCCAGTACAGTCTGCGCCCTCACTGGAGCAGCTGCACAGTaGGAGGAAGTCGGCTGGCGGCCTCCACTTGCTTATTTGCATACC +
Preference number: 5 (lower is better)
Translates to: AQASTVCALTGAAAQ*EEVGWRPPLAYLHT
Trigger: GGTATGCAAATAAGCAAGTGGAGGCCGCCAGCCGACTTCCTCGCACTGTGCAGCTGCTCCAGTGAGGGCGCAGACTGTACTGGCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425975.1
ENST00000607942.5
CDS GCA 90 bp TTGCTCCGCACAGGCCAGTACAGTCTGCGCCCTCACTGGAGCAGCTaGACAGTGCGAGGAAGTCGGCTGGCGGCCTCCACTTGCTTATTT +
Preference number: 5 (lower is better)
Translates to: LLRTGQYSLRPHWSS*TVRGSRLAASTCLF
Trigger: AAATAAGCAAGTGGAGGCCGCCAGCCGACTTCCTCGCACTGTGCAGCTGCTCCAGTGAGGGCGCAGACTGTACTGGCCTGTGCGGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425975.1
ENST00000607942.5
CDS CCA 90 bp GGCCATGAGGCTGCTATGGCAGTTGGACATGGAGCTGGAGCTGGATaGGTAGTTGTTGGGGTGTCCAGTGCAGAGGGTCGGCCGTACACG +
Preference number: 5 (lower is better)
Translates to: GHEAAMAVGHGAGAG*VVVGVSSAEGRPYT
Trigger: CGTGTACGGCCGACCCTCTGCACTGGACACCCCAACAACTACCCATCCAGCTCCAGCTCCATGTCCAACTGCCATAGCAGCCTCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS-3UTR CAA 90 bp GTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCCTCAGAAACACCGCCTaGCTCCGCACAGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: VSAELLVGIQPVVTPALGLRNTA*LRTGQY
Trigger: GTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGAG...GCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCCTCAGAAACACCGCCTaGCTCCGCACAGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSLRNTA*LRTGQY
Trigger: GTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGAG...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTACCCGCCGTCCACCACTaGGCACCTCCACTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLPAVHH*APPLGP
Trigger: AGGACCCAGTGGAGGTGCCAAGTGGTGGACGGCGGG...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCCTCGCTTGCGGAAGATaGGCTCCTGTTCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTLACGR*APVLQA
Trigger: GGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAG...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GGTGGGTCACCGTGGCCCACGTCCACGGAGTGGCTGACCGAGGCCTCCTCTCCAGACTTGATCTCCTTATaGAACTCTCGCTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GGSPWPTSTEWLTEASSPDLISL*NSRLRK
Trigger: CTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTC...TGGAGAGGAGGCCTCGGTCAGCCACTCCGTGGACGTGGGCCACGGTGACCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 90 bp CTGCCTGCTGGGTCAGGAAGTCGGCGAGCTCCTCATAAAGGCGGTTaGAGAAGTGAGACATGCTGGACTTCGACGAGATGGAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: LPAGSGSRRAPHKGG*RSETCWTSTRWRAA
Trigger: CGCTGCCCTCCATCTCGTCGAAGTCCAGCATGTCTCACTTCTCCAACCGCCTTTATGAGGAGCTCGCCGACTTCCTGACCCAGCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 90 bp CGGGCCCTTTTGGACTCCTCCAGTTTACGCAGCAGGCAGCTCCGGTaGGTCTCCGAGGACAGGTGGATGCGGGAGCCTTTTACCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RALLDSSSLRSRQLR*VSEDRWMREPFTFF
Trigger: AAAGAAGGTAAAAGGCTCCCGCATCCACCTGTCCTCGGAGACCCACCGGAGCTGCCTGCTGCGTAAACTGGAGGAGTCCAAAAGGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAGGGACCAGTGGCTTCTaGGGCAGCTGCACCCGTGCA +
Preference number: 5 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLGTSGF*GSCTRA
Trigger: TGCACGGGTGCAGCTGCCCAAGAAGCCACTGGTCCC...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCAGCTGTAGCAGCCGCTaGAGGTTCTTCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSSCSSR*RFFSSR
Trigger: CCTGCTGGAGAAGAACCTCAAGCGGCTGCTACAGCT...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp TGCAGCAACTCTGACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGCTGGCTGACCACGCTTaGCAGGGCAGGGAAGAGGCG +
Preference number: 5 (lower is better)
Translates to: CSNSDRAGNRVASGDFMVLADHA*QGREEA
Trigger: CGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAG...CACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTCAGAGTTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTACTGGCTGACCACGCTTaGCAGGGCAGGGAAGAGGCG +
Preference number: 5 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLLADHA*QGREEA
Trigger: CGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAG...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCTGCTGCAGGGGCTCTaGAGTTTGAATCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: DRAGNRVASGDFMVGHRGLLQGL*SLNLVA
Trigger: GGCCACCAGATTCAAACTCAAGAGCCCCTGCAGCAG...GCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CTGCTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATGCCTGCCGGGCCCTTTaGGACTCCTCCAGTTTACGC +
Preference number: 5 (lower is better)
Translates to: LLLAGAGVMCSNSDRAGNACRAL*DSSSLR
Trigger: GCGTAAACTGGAGGAGTCCAAAAGGGCCCGGCAGGC...ATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCTGCCCGGTCCTACTTTaGAGGAGGTCACCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSCPVLL*RRSPLD
Trigger: GTCCAGAGGTGACCTCCTCAAAAGTAGGACCGGGCA...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS CCA 90 bp CTGCTGCTGCTGCAGGGGCTCTTGAGTTTGAATCTGGTGGCCACCTaGGCACTAGACATGGAGGGGGAGCCTCCTCTGTCCTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: LLLLQGLLSLNLVAT*ALDMEGEPPLSLRF
Trigger: AAAACGCAAGGACAGAGGAGGCTCCCCCTCCATGTCTAGTGCCCAGGTGGCCACCAGATTCAAACTCAAGAGCCCCTGCAGCAGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 90 bp TCCAGTTTACGCAGCAGGCAGCTCCGGTGGGTCTCCGAGGACAGGTaGATGCGGGAGCCTTTTACCTTCTTTAAGCCCAGGGAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: SSLRSRQLRWVSEDR*MREPFTFFKPRERS
Trigger: GGACCTTTCCCTGGGCTTAAAGAAGGTAAAAGGCTCCCGCATCCACCTGTCCTCGGAGACCCACCGGAGCTGCCTGCTGCGTAAACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp AATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACGTCCACGGTTCTCCAGCAGGAGTTaGTCCCTCACAGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: NRVASGDFMVGHRGPRPRFSSRS*SLTGGN
Trigger: ATTGCCACCTGTGAGGGACAAACTCCTGCTGGAGAA...CCGTGGACGTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp AGTCTCAGCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGAGCTGTAGCAGCCGCTaGAGGTTCTTCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLSRAPRGHSACGDSCSWSCSSR*RFFSSR
Trigger: CCTGCTGGAGAAGAACCTCAAGCGGCTGCTACAGCT...CCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGCTGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CTCTTGGCAGGGGCTGGTGTGATGTGCAGCAACTCTGACAGAGCAGGGAATCGACTCGCTTGCGGAAGATaGGCTCCTGTTCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LLAGAGVMCSNSDRAGNRLACGR*APVLQA
Trigger: GGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAG...TCGATTCCCTGCTCTGTCAGAGTTGCTGCACATCACACCAGCCCCTGCCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp GCAGAGCTCCTCGTGGGCATTCAGCCTGTGGTGACTCCTGCTCTTGGCAGGGGCTTTTCGAACTCGTACTaGCGGATGACCAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: AELLVGIQPVVTPALGRGFSNSY*RMTKEA
Trigger: AGCCTCCTTGGTCATCCGCAAGTACGAGTTCGAAAA...GCCCCTGCCAAGAGCAGGAGTCACCACAGGCTGAATGCCCACGAGGAGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CAGCTTGACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCGGTGTCACCTTGAGTTaGAATCTGGTGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: QLDPCPGGFHSAGQETLTGVTLS*NLVATW
Trigger: CCAGGTGGCCACCAGATTCAAACTCAAGGTGACACC...GGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCTCCGTGGGTGTCACCTaGAGTTTGAATCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSSVGVT*SLNLVA
Trigger: GGCCACCAGATTCAAACTCAAGGTGACACCCACGGA...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS TCA 90 bp AGGACCTGGCTCTCAGTTAGGAAATCCAGAAAGTGGCCAAAGGGCTaGGGGTGCCTCTTGTTTCGGCGTTGGCCCTGGAGTGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RTWLSVRKSRKWPKG*GCLLFRRWPWSAEL
Trigger: CAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAGGCACCCTCAGCCCTTTGGCCACTTTCTGGATTTCCTAACTGAGAGCCAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS GCA 90 bp GCTGCTAGGAGTGGTGGGTCAAGGAGCCCTTCTCCTGCAAACTCATaGCCGGTCCTACTTTTGAGGAGGTCACCTCTGGACACAGTGAGG +
Preference number: 5 (lower is better)
Translates to: AARSGGSRSPSPANS*PVLLLRRSPLDTVR
Trigger: CCTCACTGTGTCCAGAGGTGACCTCCTCAAAAGTAGGACCGGGCATGAGTTTGCAGGAGAAGGGCTCCTTGACCCACCACTCCTAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACTTATCACGGCCCTCATaGTCCATGTCCTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: EQGIEWLVGTSWWVTVAHLSRPS*SMSLDL
Trigger: CAAGTCCAAGGACATGGACAATGAGGGCCGTGATAA...GTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS GCA 90 bp ACTGAGGTCCTTTTCGAACTCGTACTTGCGGATGACCAAGGAGGCTaGCTGCTGGGTCAGGAAGTCGGCGAGCTCCTCATAAAGGCGGTT +
Preference number: 5 (lower is better)
Translates to: TEVLFELVLADDQGG*LLGQEVGELLIKAV
Trigger: AACCGCCTTTATGAGGAGCTCGCCGACTTCCTGACCCAGCAGGCAGCCTCCTTGGTCATCCGCAAGTACGAGTTCGAAAAGGACCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 90 bp CAATCTCGGCTTTATCACGGCCCTCATTGTCCATGTCCTTGGACTTaGGGGGACTGGAACCCATGCCGGTGCAGGCAGACATGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: QSRLYHGPHCPCPWT*GDWNPCRCRQTCRA
Trigger: AGCTCTACATGTCTGCCTGCACCGGCATGGGTTCCAGTCCCCCCAAGTCCAAGGACATGGACAATGAGGGCCGTGATAAAGCCGAGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CTGGTAATAGCTAGGCCAGGATTCATGGGCCCCCATCAGCTTGACCCCTGCCCATTCTCCAGCAGGAGTTaGTCCCTCACAGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: LVIARPGFMGPHQLDPCPFSSRS*SLTGGN
Trigger: ATTGCCACCTGTGAGGGACAAACTCCTGCTGGAGAA...TGGGCAGGGGTCAAGCTGATGGGGGCCCATGAATCCTGGCCTAGCTATTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCGGTGGGTTTTGTAATTaGGGATCTGAGTCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSGGFCN*GSESGA
Trigger: GGCACCTGACTCAGATCCCAAATTACAAAACCCACC...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp ACAGAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCTTATTGAACTCTCGCTaGCGGAAGATTGGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: TEQGIEWLVGTSWWVTVALLNSR*RKIGSC
Trigger: ACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAA...GGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp GACCCCTGCCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCTTATTGAACTCTCGCTaGCGGAAGATTGGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: DPCPGGFHSAGQETLTLSLLNSR*RKIGSC
Trigger: ACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAA...GCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGGCAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS-3UTR CAA 90 bp GAGCAGGGAATCGAGTGGCTAGTGGGGACTTCATGGTGGGTCACCGTGGCCCACTCCTGGTCTTCATCCTaGAACTCATCCTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: EQGIEWLVGTSWWVTVAHSWSSS*NSSSSS
Trigger: TGAAGATGAGGATGAGTTCAAGGATGAAGACCAGGA...GTGGGCCACGGTGACCCACCATGAAGTCCCCACTAGCCACTCGATTCCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS-3UTR CAA 90 bp CCCAGGAGGTTTCCACAGTGCAGGGCAAGAGACCTTGACCTTGAGCACCTGTTAGACTTGATCTCCTTATaGAACTCTCGCTTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PRRFPQCRARDLDLEHLLDLISL*NSRLRK
Trigger: CTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTC...TAACAGGTGCTCAAGGTCAAGGTCTCTTGCCCTGCACTGTGGAAACCTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS TCA 72 bp AGAGGGTCGGCCGTACACGGTGCCGGTGTACGGTGCTaGGGCTGGGCCGGGCATGTGCCCGCCGTCCACCAC +
Preference number: 6 (lower is better)
Translates to: RGSAVHGAGVRC*GWAGHVPAVHH
Trigger: GTGGTGGACGGCGGGCACATGCCCGGCCCAGCCTCAGCACCGTACACCGGCACCGTGTACGGCCGACCCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 72 bp GTGGCCCTGGCTGCAGGCCACCTCCACCACAATCCCTaGCGTGGGCAGGGTGAGGTGCAGGCCCTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: VALAAGHLHHNP*RGQGEVQALPG
Trigger: CCCTGGCAGGGCCTGCACCTCACCCTGCCCACGCCAGGGATTGTGGTGGAGGTGGCCTGCAGCCAGGGCCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS CCA 72 bp CCAGAGGCGGCAGATCTGAGGTGGGCTCCAAGCTGGTaGGGAACAGAGGACGGCCGTCGCGGCAGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: PEAADLRWAPSW*GTEDGRRGSGR
Trigger: GCGCCCACTGCCGCGACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGCCTCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS GCA 72 bp GCCCGCCGTCCACCACTTGGCACCTCCACTGGGTCCTaGACCTCCACAAGCGGCACCCCAGCCTCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: ARRPPLGTSTGS*TSTSGTPASVF
Trigger: GAAGACGGAGGCTGGGGTGCCGCTTGTGGAGGTGCAGGACCCAGTGGAGGTGCCAAGTGGTGGACGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 72 bp CGTCATCGGCCAGGTAACCCGAGTGGTGGCGGCACCTaGCCATGTGGTCACCTGGCAGGTGACCGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: RHRPGNPSGGGT*PCGHLAGDRAC
Trigger: GCAGGCCCGGTCACCTGCCAGGTGACCACATGGCCAGGTGCCGCCACCACTCGGGTTACCTGGCCGATGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp AGCCCAGAGGCGGCAGATCTGAGGTGGGCTCCAAGCTaGTGGGGAACAGAGGACGGCCGTCGCGGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: SPEAADLRWAPS*WGTEDGRRGSG
Trigger: CCCACTGCCGCGACGGCCGTCCTCTGTTCCCCACCAGCTTGGAGCCCACCTCAGATCTGCCGCCTCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 90 bp GTGCTGCAGTGGGAGGTGCTGAGCCGGGAGGCCTGCCGGGCCCTTTaGGACTCCTCCAGTTTACGCAGCAGGCAGCTCCGGTGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: VLQWEVLSREACRAL*DSSSLRSRQLRWVS
Trigger: GGAGACCCACCGGAGCTGCCTGCTGCGTAAACTGGAGGAGTCCAAAAGGGCCCGGCAGGCCTCCCGGCTCAGCACCTCCCACTGCAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 72 bp TGGCACACGGCCCGGCTTGCAGGCTGGCCGCATTTCTaGGACCAGTGGCTTCTTGGGCAGCTGCACCCGTGC +
Preference number: 6 (lower is better)
Translates to: WHTARLAGWPHF*DQWLLGQLHPC
Trigger: GCACGGGTGCAGCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp TCGCGGCAGTGGGCGCCACGGAGCTTATCCACAGCCTaGCTGACCACGCTTTGCAGGGCAGGGAAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: SRQWAPRSLSTA*LTTLCRAGKRR
Trigger: CCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCCCACTGCCGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 72 bp AAGCTGGTGGGGAACAGAGGACGGCCGTCGCGGCAGTaGGCGCCACGGAGCTTATCCACAGCCTGGCTGACC +
Preference number: 6 (lower is better)
Translates to: KLVGNRGRPSRQ*APRSLSTAWLT
Trigger: GGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCCCACTGCCGCGACGGCCGTCCTCTGTTCCCCACCAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 72 bp TGGGAGGTGCTGAGCCGGGAGGCCTGCCGGGCCCTTTaGGACTCCTCCAGTTTACGCAGCAGGCAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: WEVLSREACRAL*DSSSLRSRQLR
Trigger: CCGGAGCTGCCTGCTGCGTAAACTGGAGGAGTCCAAAAGGGCCCGGCAGGCCTCCCGGCTCAGCACCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS TCA 72 bp GGCAGTGGGCGCCACGGAGCTTATCCACAGCCTGGCTaGCCACGCTTTGCAGGGCAGGGAAGAGGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: GSGRHGAYPQPG*PRFAGQGRGGG
Trigger: ACCACCGCCTCTTCCCTGCCCTGCAAAGCGTGGTCAGCCAGGCTGTGGATAAGCTCCGTGGCGCCCACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 72 bp TGGGCAGCTGCACCCGTGCACTGCACATGGAGTGGCTaGCCTCGTCATCGGCCAGGTAACCCGAGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: WAAAPVHCTWSG*PRHRPGNPSGG
Trigger: GCCACCACTCGGGTTACCTGGCCGATGACGAGGCCAGCCACTCCATGTGCAGTGCACGGGTGCAGCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp GGATGGTGGGTGTGGCACACGGCCCGGCTTGCAGGCTaGCCGCATTTCTGGGACCAGTGGCTTCTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: GWWVWHTARLAG*PHFWDQWLLGQ
Trigger: CTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp TTCGGCGTTGGCCCTGGAGTGCTGAGCTGCCACATGTaGATGGTGGGTGTGGCACACGGCCCGGCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: FGVGPGVLSCHM*MVGVAHGPACR
Trigger: CCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CAA 90 bp GCTGAGCTGCCACATGTGGATGGTGGGTGTGGCACACGGCCCGGCTaGCAGGCTGGCCGCATTTCTGGGACCAGTGGCTTCTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: AELPHVDGGCGTRPG*QAGRISGTSGFLGS
Trigger: GCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS GCA 72 bp GCCTCTTGTTTCGGCGTTGGCCCTGGAGTGCTGAGCTaGCACATGTGGATGGTGGGTGTGGCACACGGCCCG +
Preference number: 6 (lower is better)
Translates to: ASCFGVGPGVLS*HMWMVGVAHGP
Trigger: CGGGCCGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS GCA 72 bp CAAGCGGCACCCCAGCCTCCGTCTTCATGGCAGCCATaGGCTCAGTCGCCTTCTCCACCACTGTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: QAAPQPPSSWQP*AQSPSPPLSPG
Trigger: GCCTGGAGACAGTGGTGGAGAAGGCGACTGAGCGCATGGCTGCCATGAAGACGGAGGCTGGGGTGCCGCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS GCA 72 bp ACAGGCCAGTACAGTCTGCGCCCTCACTGGAGCAGCTaGACAGTGCGAGGAAGTCGGCTGGCGGCCTCCACT +
Preference number: 6 (lower is better)
Translates to: TGQYSLRPHWSS*TVRGSRLAAST
Trigger: AGTGGAGGCCGCCAGCCGACTTCCTCGCACTGTGCAGCTGCTCCAGTGAGGGCGCAGACTGTACTGGCCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp GCCCGGCTTGCAGGCTGGCCGCATTTCTGGGACCAGTaGCTTCTTGGGCAGCTGCACCCGTGCACTGCACAT +
Preference number: 6 (lower is better)
Translates to: ARLAGWPHFWDQ*LLGQLHPCTAH
Trigger: ATGTGCAGTGCACGGGTGCAGCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp GCACCTCCACAAGCGGCACCCCAGCCTCCGTCTTCATaGCAGCCATGCGCTCAGTCGCCTTCTCCACCACTG +
Preference number: 6 (lower is better)
Translates to: APPQAAPQPPSS*QPCAQSPSPPL
Trigger: CAGTGGTGGAGAAGGCGACTGAGCGCATGGCTGCCATGAAGACGGAGGCTGGGGTGCCGCTTGTGGAGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 72 bp GAGCTTGGGCTCCAAAGGGCTGAGCTGCCGGCTGGCTaGCAAGTTGGTGTAGAGGGAGCGGCAGGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: ELGLQRAELPAG*QVGVEGAAGLC
Trigger: ACAGAGCCCTGCCGCTCCCTCTACACCAACTTGCCAGCCAGCCGGCAGCTCAGCCCTTTGGAGCCCAAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 72 bp TTGCTCCGCACAGGCCAGTACAGTCTGCGCCCTCACTaGAGCAGCTGCACAGTGCGAGGAAGTCGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: LLRTGQYSLRPH*SSCTVRGSRLA
Trigger: CGCCAGCCGACTTCCTCGCACTGTGCAGCTGCTCCAGTGAGGGCGCAGACTGTACTGGCCTGTGCGGAGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp GACAACCTGAGGGTCTCCAATAGGTCCACGCATCTGTaGCCCTGGAGTCTGCGGGTCCCTCGCTCCCCGCAC +
Preference number: 6 (lower is better)
Translates to: DNLRVSNRSTHL*PWSLRVPRSPH
Trigger: GTGCGGGGAGCGAGGGACCCGCAGACTCCAGGGCCACAGATGCGTGGACCTATTGGAGACCCTCAGGTTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425975.1
CDS CAA 72 bp CCACATGTGGATGGTGGGTGTGGCACACGGCCCGGCTaGCAGGCTGGCCGCATTTCTGGGACCAGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: PHVDGGCGTRPG*QAGRISGTSGF
Trigger: GAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS GCA 72 bp CACATGTGGATGGTGGGTGTGGCACACGGCCCGGCTTaGAGGCTGGCCGCATTTCTGGGACCAGTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: HMWMVGVAHGPA*RLAAFLGPVAS
Trigger: AGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAAGCCGGGCCGTGTGCCACACCCACCATCCACATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS GCA 72 bp CTGCTCCATGGCCCCCATGCGTCAGAAACACCGCCTTaGTCCGCACAGGCCAGTACAGTCTGCGCCCTCACT +
Preference number: 6 (lower is better)
Translates to: LLHGPHASETPP*SAQASTVCALT
Trigger: AGTGAGGGCGCAGACTGTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGACGCATGGGGGCCATGGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425975.1
CDS CAA 72 bp TCTGCTCCATGGCCCCCATGCGTCAGAAACACCGCCTaGCTCCGCACAGGCCAGTACAGTCTGCGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: SAPWPPCVRNTA*LRTGQYSLRPH
Trigger: GTGAGGGCGCAGACTGTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGACGCATGGGGGCCATGGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425975.1
CDS CAA 90 bp CCTGTTCTCCAGGCCTCGGCTCTGATGCTTCAGGCACGCCAGAGCTaGAGCCCAGCAGCCCTGAGAACCAGGACAAGGGCTGCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: PVLQASALMLQARQS*SPAALRTRTRAAPV
Trigger: CACAGGAGCAGCCCTTGTCCTGGTTCTCAGGGCTGCTGGGCTCAAGCTCTGGCGTGCCTGAAGCATCAGAGCCGAGGCCTGGAGAACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS TCA 72 bp AGGGTGCCTCTTGTTTCGGCGTTGGCCCTGGAGTGCTaGGCTGCCACATGTGGATGGTGGGTGTGGCACACG +
Preference number: 6 (lower is better)
Translates to: RVPLVSALALEC*AATCGWWVWHT
Trigger: CGTGTGCCACACCCACCATCCACATGTGGCAGCTCAGCACTCCAGGGCCAACGCCGAAACAAGAGGCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp AGCAGGAGTTTGTCCCTCACAGGTGGCAATGAGCCTTaGGCACCTAGGTCACTGTCCCGGCTGTGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SRSLSLTGGNEP*APRSLSRLWEP
Trigger: GGGCTCCCACAGCCGGGACAGTGACCTAGGTGCCCAAGGCTCATTGCCACCTGTGAGGGACAAACTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 72 bp CGCAGCAGGCAGCTCCGGTGGGTCTCCGAGGACAGGTaGATGCGGGAGCCTTTTACCTTCTTTAAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RSRQLRWVSEDR*MREPFTFFKPR
Trigger: CCTGGGCTTAAAGAAGGTAAAAGGCTCCCGCATCCACCTGTCCTCGGAGACCCACCGGAGCTGCCTGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CAA 72 bp TTGCAGGCTGGCCGCATTTCTGGGACCAGTGGCTTCTaGGGCAGCTGCACCCGTGCACTGCACATGGAGTGG +
Preference number: 6 (lower is better)
Translates to: LQAGRISGTSGF*GSCTRALHMEW
Trigger: CCACTCCATGTGCAGTGCACGGGTGCAGCTGCCCAAGAAGCCACTGGTCCCAGAAATGCGGCCAGCCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS TCA 72 bp TGCAGGCAGACATGTAGAGCTTGGGCTCCAAAGGGCTaGGCTGCCGGCTGGCTGGCAAGTTGGTGTAGAGGG +
Preference number: 6 (lower is better)
Translates to: CRQTCRAWAPKG*AAGWLASWCRG
Trigger: CCCTCTACACCAACTTGCCAGCCAGCCGGCAGCTCAGCCCTTTGGAGCCCAAGCTCTACATGTCTGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 72 bp CTGCAGGGGCTCTTGAGTTTGAATCTGGTGGCCACCTaGGCACTAGACATGGAGGGGGAGCCTCCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LQGLLSLNLVAT*ALDMEGEPPLS
Trigger: GGACAGAGGAGGCTCCCCCTCCATGTCTAGTGCCCAGGTGGCCACCAGATTCAAACTCAAGAGCCCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 72 bp TTGGACTCCTCCAGTTTACGCAGCAGGCAGCTCCGGTaGGTCTCCGAGGACAGGTGGATGCGGGAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: LDSSSLRSRQLR*VSEDRWMREPF
Trigger: AAAAGGCTCCCGCATCCACCTGTCCTCGGAGACCCACCGGAGCTGCCTGCTGCGTAAACTGGAGGAGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CAA 90 bp TGGAGTGAGGGGCTGGGGACATTGGGCTTCTCCGTGGGTGTCACCTaGAGTTTGAATCTGGTGGCCACCTGGGCACTAGACATGGAGGGG +
Preference number: 6 (lower is better)
Translates to: WSEGLGTLGFSVGVT*SLNLVATWALDMEG
Trigger: CCCCTCCATGTCTAGTGCCCAGGTGGCCACCAGATTCAAACTCAAGGTGACACCCACGGAGAAGCCCAATGTCCCCAGCCCCTCACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS TCA 72 bp CCTGAGAACCAGGACAAGGGCTGCTCCTGTGTCCACTaGAAGCTGGTCTGGCTACCCAGCGAATCCCACAGC +
Preference number: 6 (lower is better)
Translates to: PENQDKGCSCVH*KLVWLPSESHS
Trigger: GCTGTGGGATTCGCTGGGTAGCCAGACCAGCTTTCAGTGGACACAGGAGCAGCCCTTGTCCTGGTTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS GCA 72 bp CTCTTCAGCTGCGCATTCCTCTCAGAAACACCGCCTTaGTCCGCACAGGCCAGTACAGTCTGCGCCCTCACT +
Preference number: 6 (lower is better)
Translates to: LFSCAFLSETPP*SAQASTVCALT
Trigger: AGTGAGGGCGCAGACTGTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGAGAGGAATGCGCAGCTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CCA 72 bp CTCTCTCTTCAGCTGCGCATTCCTCTCTGCGTGGGGTaGGGAGACAACCTGAGGGTCTCCAATAGGTCCACG +
Preference number: 6 (lower is better)
Translates to: LSLQLRIPLCVG*GDNLRVSNRST
Trigger: CGTGGACCTATTGGAGACCCTCAGGTTGTCTCCCCACCCCACGCAGAGAGGAATGCGCAGCTGAAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425975.1
CDS CCA 72 bp GTGGGTGTCACCTTGAGTTTGAATCTGGTGGCCACCTaGGCACTAGACATGGAGGGGGAGCCTCCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: VGVTLSLNLVAT*ALDMEGEPPLS
Trigger: GGACAGAGGAGGCTCCCCCTCCATGTCTAGTGCCCAGGTGGCCACCAGATTCAAACTCAAGGTGACACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS CAA 72 bp TCTCTTCAGCTGCGCATTCCTCTCAGAAACACCGCCTaGCTCCGCACAGGCCAGTACAGTCTGCGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: SLQLRIPLRNTA*LRTGQYSLRPH
Trigger: GTGAGGGCGCAGACTGTACTGGCCTGTGCGGAGCAAGGCGGTGTTTCTGAGAGGAATGCGCAGCTGAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 72 bp GGGCTGGGGACATTGGGCTTCTCCGTGGGTGTCACCTaGAGTTTGAATCTGGTGGCCACCTGGGCACTAGAC +
Preference number: 6 (lower is better)
Translates to: GLGTLGFSVGVT*SLNLVATWALD
Trigger: GTCTAGTGCCCAGGTGGCCACCAGATTCAAACTCAAGGTGACACCCACGGAGAAGCCCAATGTCCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS CAA 90 bp CTCTCCAGCTGTAGCAGCCGCTTGAGGTTCTTCTCCAGCAGGAGTTaGTCCCTCACAGGTGGCAATGAGCCTTGGGCACCTAGGTCACTG +
Preference number: 6 (lower is better)
Translates to: LSSCSSRLRFFSSRS*SLTGGNEPWAPRSL
Trigger: CAGTGACCTAGGTGCCCAAGGCTCATTGCCACCTGTGAGGGACAAACTCCTGCTGGAGAAGAACCTCAAGCGGCTGCTACAGCTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 90 bp GGGTCAAGGAGCCCTTCTCCTGCAAACTCATGCCCGGTCCTACTTTaGAGGAGGTCACCTCTGGACACAGTGAGGCGGGAGATGAAGAGG +
Preference number: 6 (lower is better)
Translates to: GSRSPSPANSCPVLL*RRSPLDTVRREMKR
Trigger: CCTCTTCATCTCCCGCCTCACTGTGTCCAGAGGTGACCTCCTCAAAAGTAGGACCGGGCATGAGTTTGCAGGAGAAGGGCTCCTTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS CCA 72 bp CTTTATCACGGCCCTCATTGTCCATGTCCTTGGACTTaGGGGGACTGGAACCCATGCCGGTGCAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: LYHGPHCPCPWT*GDWNPCRCRQT
Trigger: TGTCTGCCTGCACCGGCATGGGTTCCAGTCCCCCCAAGTCCAAGGACATGGACAATGAGGGCCGTGATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CAA 72 bp CCCAGCTGCTTACTGAGGTCCTTTTCGAACTCGTACTaGCGGATGACCAAGGAGGCTGCCTGCTGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: PSCLLRSFSNSY*RMTKEAACWVR
Trigger: CCTGACCCAGCAGGCAGCCTCCTTGGTCATCCGCAAGTACGAGTTCGAAAAGGACCTCAGTAAGCAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CAA 72 bp AGCCCTTCTCCTGCAAACTCATGCCCGGTCCTACTTTaGAGGAGGTCACCTCTGGACACAGTGAGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: SPSPANSCPVLL*RRSPLDTVRRE
Trigger: CTCCCGCCTCACTGTGTCCAGAGGTGACCTCCTCAAAAGTAGGACCGGGCATGAGTTTGCAGGAGAAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS GCA 72 bp CGAGCTCCTCATAAAGGCGGTTGGAGAAGTGAGACATaGTGGACTTCGACGAGATGGAGGGCAGCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: RAPHKGGWRSET*WTSTRWRAAAS
Trigger: AGAAGCCGCTGCCCTCCATCTCGTCGAAGTCCAGCATGTCTCACTTCTCCAACCGCCTTTATGAGGAGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS GCA 72 bp CTTTTCGAACTCGTACTTGCGGATGACCAAGGAGGCTaGCTGCTGGGTCAGGAAGTCGGCGAGCTCCTCATA +
Preference number: 6 (lower is better)
Translates to: LFELVLADDQGG*LLGQEVGELLI
Trigger: TATGAGGAGCTCGCCGACTTCCTGACCCAGCAGGCAGCCTCCTTGGTCATCCGCAAGTACGAGTTCGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CCA 72 bp GGGTCAGGAAGTCGGCGAGCTCCTCATAAAGGCGGTTaGAGAAGTGAGACATGCTGGACTTCGACGAGATGG +
Preference number: 6 (lower is better)
Translates to: GSGSRRAPHKGG*RSETCWTSTRW
Trigger: CCATCTCGTCGAAGTCCAGCATGTCTCACTTCTCCAACCGCCTTTATGAGGAGCTCGCCGACTTCCTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CAA 72 bp TGTAGCAGCCGCTTGAGGTTCTTCTCCAGCAGGAGTTaGTCCCTCACAGGTGGCAATGAGCCTTGGGCACCT +
Preference number: 6 (lower is better)
Translates to: CSSRLRFFSSRS*SLTGGNEPWAP
Trigger: AGGTGCCCAAGGCTCATTGCCACCTGTGAGGGACAAACTCCTGCTGGAGAAGAACCTCAAGCGGCTGCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 72 bp GGGACATTGGGCTTCTCCGTGGGTGTCACCTTGAGTTaGAATCTGGTGGCCACCTGGGCACTAGACATGGAG +
Preference number: 6 (lower is better)
Translates to: GTLGFSVGVTLS*NLVATWALDME
Trigger: CTCCATGTCTAGTGCCCAGGTGGCCACCAGATTCAAACTCAAGGTGACACCCACGGAGAAGCCCAATGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607942.5
CDS TCA 72 bp CTCTCAGTTAGGAAATCCAGAAAGTGGCCAAAGGGCTaGGGGTGCCTCTTGTTTCGGCGTTGGCCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: LSVRKSRKWPKG*GCLLFRRWPWS
Trigger: ACTCCAGGGCCAACGCCGAAACAAGAGGCACCCTCAGCCCTTTGGCCACTTTCTGGATTTCCTAACTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292779.4
ENST00000425975.1
ENST00000607942.5
CDS CCA 72 bp GCTCCTCATAAAGGCGGTTGGAGAAGTGAGACATGCTaGACTTCGACGAGATGGAGGGCAGCGGCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: APHKGGWRSETC*TSTRWRAAASS
Trigger: AGAAGAAGCCGCTGCCCTCCATCTCGTCGAAGTCCAGCATGTCTCACTTCTCCAACCGCCTTTATGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292779.4
CDS CAA 90 bp AGGTCGAGGGACTCCAGCTGGCTCAGTAATGACTTGATCTCCTTATaGAACTCTCGCTTGCGGAAGATTGGCTCCTGTTCTCCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: RSRDSSWLSNDLISL*NSRLRKIGSCSPGL
Trigger: GAGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAGCCAGCTGGAGTCCCTCGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 90 bp TCCAGCTGGCTCAGTAATGACTTGATCTCCTTATTGAACTCTCGCTaGCGGAAGATTGGCTCCTGTTCTCCAGGCCTCGGCTCTGATGCT +
Preference number: 6 (lower is better)
Translates to: SSWLSNDLISLLNSR*RKIGSCSPGLGSDA
Trigger: AGCATCAGAGCCGAGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAGCCAGCTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 72 bp CTCAGTAATGACTTGATCTCCTTATTGAACTCTCGCTaGCGGAAGATTGGCTCCTGTTCTCCAGGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: LSNDLISLLNSR*RKIGSCSPGLG
Trigger: GCCGAGGCCTGGAGAACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 72 bp GGCAGGTCGAGGGACTCCAGCTGGCTCAGTAATGACTaGATCTCCTTATTGAACTCTCGCTTGCGGAAGATT +
Preference number: 6 (lower is better)
Translates to: GRSRDSSWLSND*ISLLNSRLRKI
Trigger: AATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAGCCAGCTGGAGTCCCTCGACCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5
CDS CAA 72 bp GACTCCAGCTGGCTCAGTAATGACTTGATCTCCTTATaGAACTCTCGCTTGCGGAAGATTGGCTCCTGTTCT +
Preference number: 6 (lower is better)
Translates to: DSSWLSNDLISL*NSRLRKIGSCS
Trigger: AGAACAGGAGCCAATCTTCCGCAAGCGAGAGTTCAATAAGGAGATCAAGTCATTACTGAGCCAGCTGGAGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292779.4
ENST00000607942.5