RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC113 (Homo sapiens)

Ensembl gene IDs: ENSG00000103021

Ensembl transcript IDs: ENST00000219299.8, ENST00000443128.6, ENST00000561517.5, ENST00000566498.1, ENST00000569374.1, ENST00000616795.1

Found 576 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCTGCTGAGAGATCACCAGGGAATCACGGCAGCTTTGCAGCATaGCCTCCCCGCTGGCCTGCCCACGGAGTTGCTCCCATGTTTTCC +
Preference number: 1 (lower is better)
Translates to: WPAERSPGNHGSFAA*PPRWPAHGVAPMFS
Trigger: GGAAAACATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCCCTGGTGATCTCTCAGCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp CGGCAGCTTTGCAGCATGGCCTCCCCGCTGGCCTGCCCACGGAGTTaGTCCCATGTTTTCCCACTGGTCTTCATCTCTGTTCTGGTGTGG +
Preference number: 1 (lower is better)
Translates to: RQLCSMASPLACPRS*SHVFPLVFISVLVW
Trigger: CCACACCAGAACAGAGATGAAGACCAGTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp ACCAGGGAATCACGGCAGCTTTGCAGCATGGCCTCCCCGCTGGCCTaGCCACGGAGTTGCTCCCATGTTTTCCCACTGGTCTTCATCTCT +
Preference number: 1 (lower is better)
Translates to: TRESRQLCSMASPLA*PRSCSHVFPLVFIS
Trigger: AGAGATGAAGACCAGTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 90 bp AGATCACCAGGGAATCACGGCAGCTTTGCAGCATGGCCTCCCCGCTaGCCTGCCCACGGAGTTGCTCCCATGTTTTCCCACTGGTCTTCA +
Preference number: 1 (lower is better)
Translates to: RSPGNHGSFAAWPPR*PAHGVAPMFSHWSS
Trigger: TGAAGACCAGTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCCCTGGTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 90 bp GTGACCAAGACAGACCACACACCCAGGTCTCGGATGGTAAGGGGCTaGAGCGGCTGCTCTTCTGCCTTTCTGCTGCTCGTGGTTCAGTCT +
Preference number: 1 (lower is better)
Translates to: VTKTDHTPRSRMVRG*SGCSSAFLLLVVQS
Trigger: AGACTGAACCACGAGCAGCAGAAAGGCAGAAGAGCAGCCGCTTCAGCCCCTTACCATCCGAGACCTGGGTGTGTGGTCTGTCTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 90 bp TGCCCTGTGGTTCTTTCAGTGGTAACAGTTCCAGGGGCCAGGCTGTaGAAACACTCCCCATGGGCAGATGTGGCCCAGGAGATGATACGC +
Preference number: 1 (lower is better)
Translates to: CPVVLSVVTVPGARL*KHSPWADVAQEMIR
Trigger: GCGTATCATCTCCTGGGCCACATCTGCCCATGGGGAGTGTTTTCACAGCCTGGCCCCTGGAACTGTTACCACTGAAAGAACCACAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 90 bp GACCCAGGAAGCCCAATGATGTGCCAGCTACAGCAGTTCGATCTGTaGGTTCTGAGAGGAGTCCTGAACTTCGGTGGTGAGACGTGCCCT +
Preference number: 1 (lower is better)
Translates to: DPGSPMMCQLQQFDL*VLRGVLNFGGETCP
Trigger: AGGGCACGTCTCACCACCGAAGTTCAGGACTCCTCTCAGAACCCACAGATCGAACTGCTGTAGCTGGCACATCATTGGGCTTCCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp CACACCCAGGTCTCGGATGGTAAGGGGCTGAAGCGGCTGCTCTTCTaGCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTG +
Preference number: 1 (lower is better)
Translates to: HTQVSDGKGLKRLLF*LSAARGSVCSDCFL
Trigger: CAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAAGAGCAGCCGCTTCAGCCCCTTACCATCCGAGACCTGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 90 bp ACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTaGAAGACTACAGCAAATGGATCACATCCAAGGCTGAGAGGGCCG +
Preference number: 1 (lower is better)
Translates to: TSVVRRALACFCTPR*KTTANGSHPRLRGP
Trigger: CGGCCCTCTCAGCCTTGGATGTGATCCATTTGCTGTAGTCTTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 90 bp AGCACGGCCAGCCAGGCTGGTAAGCAGTTGCCAGGTGGCAGGAAGTaGCTTACACTAAGGGTTGAAGCAAGGCAGAGAAGGGAAAATGTG +
Preference number: 1 (lower is better)
Translates to: STASQAGKQLPGGRK*LTLRVEARQRRENV
Trigger: CACATTTTCCCTTCTCTGCCTTGCTTCAACCCTTAGTGTAAGCCACTTCCTGCCACCTGGCAACTGCTTACCAGCCTGGCTGGCCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 90 bp AGGCACAGAATGAAGTCCTCAAGGCCTTCCTCACATGTCTGGCCTTaGCCTGCTGAGAGATCACCAGGGAATCACGGCAGCTTTGCAGCA +
Preference number: 1 (lower is better)
Translates to: RHRMKSSRPSSHVWP*PAERSPGNHGSFAA
Trigger: TGCTGCAAAGCTGCCGTGATTCCCTGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGAGGAAGGCCTTGAGGACTTCATTCTGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 90 bp GCAGTTCGATCTGTGGGTTCTGAGAGGAGTCCTGAACTTCGGTGGTaGGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGACTA +
Preference number: 1 (lower is better)
Translates to: AVRSVGSERSPELRW*DVPWPVSVHQGGRL
Trigger: TAGTCTTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAGGACTCCTCTCAGAACCCACAGATCGAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 90 bp AAGGAGAGGCACAGAATGAAGTCCTCAAGGCCTTCCTCACATGTCTaGCCTTGGCCTGCTGAGAGATCACCAGGGAATCACGGCAGCTTT +
Preference number: 1 (lower is better)
Translates to: KERHRMKSSRPSSHV*PWPAERSPGNHGSF
Trigger: AAAGCTGCCGTGATTCCCTGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGAGGAAGGCCTTGAGGACTTCATTCTGTGCCTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 90 bp GCCTCTGCCTCTTGTGCTTCAGAAGTCGCAGCCCCTACAGGATTATaGGGAAGAGAAAAAGCGTATATGCTGTGCCCAGGTGGGTGGAAC +
Preference number: 1 (lower is better)
Translates to: ASASCASEVAAPTGL*GREKAYMLCPGGWN
Trigger: GTTCCACCCACCTGGGCACAGCATATACGCTTTTTCTCTTCCCCATAATCCTGTAGGGGCTGCGACTTCTGAAGCACAAGAGGCAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp GATCTGTGGGTTCTGAGAGGAGTCCTGAACTTCGGTGGTGAGACGTaGCCTGGCCTGTTTCTGTACACCAAGGTGGAAGACTACAGCAAA +
Preference number: 1 (lower is better)
Translates to: DLWVLRGVLNFGGET*PGLFLYTKVEDYSK
Trigger: TTTGCTGTAGTCTTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAGGACTCCTCTCAGAACCCACAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 90 bp GGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACCAGTCAATTaGAAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAG +
Preference number: 1 (lower is better)
Translates to: GRHSEVHTRASSPVN*KVRSATLKHPLPSK
Trigger: CTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp GGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTaGCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAAT +
Preference number: 1 (lower is better)
Translates to: GAHKGLFTSQLKSQE*HTKAPPSIQGEAQN
Trigger: ATTCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp TGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAATTaGGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATG +
Preference number: 1 (lower is better)
Translates to: CCSWFSLFRLFPVVN*GPIPCLSPNCESNM
Trigger: CATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCAATTAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 90 bp TCTATCCCTCTCCCAGGTGTGGGAAGGTCACTTTCACTATGCTTGTaGACTAAATGCTGGCTAACAAGTGTCAAACCATTAGAGTGCCCT +
Preference number: 1 (lower is better)
Translates to: SIPLPGVGRSLSLCL*TKCWLTSVKPLECP
Trigger: AGGGCACTCTAATGGTTTGACACTTGTTAGCCAGCATTTAGTTCACAAGCATAGTGAAAGTGACCTTCCCACACCTGGGAGAGGGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 90 bp AAGAGAGGGAAGGTTTGGCCAAAGGACTGGAAAGGGGCAAGAAAATaGAATATGAACCAGGAAGCTATAGGCAATCAGCAGAAGTCCACA +
Preference number: 1 (lower is better)
Translates to: KRGKVWPKDWKGARK*NMNQEAIGNQQKST
Trigger: TGTGGACTTCTGCTGATTGCCTATAGCTTCCTGGTTCATATTTCATTTTCTTGCCCCTTTCCAGTCCTTTGGCCAAACCTTCCCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 90 bp GAGCATTTCAGGACAAAACAGAAACAAACACCAACATTTCAGGAATaGGAAGCCAGAAGAGAGGGAAGGTTTGGCCAAAGGACTGGAAAG +
Preference number: 1 (lower is better)
Translates to: EHFRTKQKQTPTFQE*EARREGRFGQRTGK
Trigger: CTTTCCAGTCCTTTGGCCAAACCTTCCCTCTCTTCTGGCTTCTCATTCCTGAAATGTTGGTGTTTGTTTCTGTTTTGTCCTGAAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp CCAATCACTCATCCAATCATTTGTCCTAAATCACATTCTTTTTCTTaGTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGAC +
Preference number: 1 (lower is better)
Translates to: PITHPIICPKSHSFS*SGYTTTVKTNCESD
Trigger: GTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAGAATGTGATTTAGGACAAATGATTGGATGAGTGATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp ATTTGTGGTGGTGGCTGCCTAGATTTGAAATTGTATCCTATAATTTaGCCCATTTCCAGTGAGAACCAGCGTAAAACATTTCTAGAACAA +
Preference number: 1 (lower is better)
Translates to: ICGGGCLDLKLYPII*PISSENQRKTFLEQ
Trigger: TTGTTCTAGAAATGTTTTACGCTGGTTCTCACTGGAAATGGGGCAAATTATAGGATACAATTTCAAATCTAGGCAGCCACCACCACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 90 bp TTTATTGCAAAACATGAAGGACTGCCTCTCATTAAGAAATATGTTTaGCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGT +
Preference number: 1 (lower is better)
Translates to: FIAKHEGLPLIKKYV*PSKVGVTSIECLFC
Trigger: ACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCAAACATATTTCTTAATGAGAGGCAGTCCTTCATGTTTTGCAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 90 bp TCTGGCCTTGGCCTGCTGAGAGATCACCAGGGAATCACGGCAGCTTaGCAGCATGGCCTCCCCGCTGGCCTGCCCACGGAGTTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SGLGLLRDHQGITAA*QHGLPAGLPTELLP
Trigger: TGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCCCTGGTGATCTCTCAGCAGGCCAAGGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGCCTGAACTTCGGTGGTaGGACGTGCCCTGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEPELRW*DVPWPV
Trigger: AACAGGCCAGGGCACGTCTCACCACCGAAGTTCAGG...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGGCAGCTTTGCAGCATaGCCTCCCCGCTGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSGSFAA*PPRWPA
Trigger: GGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGGCTCAGAGAGGATTTaGTCACTTGCCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEGSERI*SLARVP
Trigger: TGGGACCCTGGCAAGTGACCAAATCCTCTCTGAGCC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGCCTCCCCGCTGGCCTaGCCACGGAGTTGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRASPLA*PRSCSH
Trigger: ATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAGCATGGCCTCCCCGCTaGCCTGCCCACGGAGTTGCT +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQAWPPR*PAHGVA
Trigger: AGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGC...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGCAGACAGGGAACAGTaGGAGGAGCCCGTGACTAGA +
Preference number: 2 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSADREQ*EEPVTR
Trigger: TCTAGTCACGGGCTCCTCTCACTGTTCCCTGTCTGC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGTCCCTCTCCCAGGTGTaGGAAGGTCACTTTCACTAT +
Preference number: 2 (lower is better)
Translates to: LASLGMTTPFSDQDGPWESLSQV*EGHFHY
Trigger: ATAGTGAAAGTGACCTTCCCACACCTGGGAGAGGGA...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAATGTGGCCCAGGAGATaGTACGCAGCCTGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQMWPRR*YAAWVG
Trigger: CCCCACCCAGGCTGCGTATCATCTCCTGGGCCACAT...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGGTAGGAGAATCGCTTaGACCCAGGAGGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSGRRIA*TQEEEV
Trigger: AACCTCCTCCTCCTGGGTTCAAGCGATTCTCCTACC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGAGGCGGGTGGATCATaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHREAGGS*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCATGATCCACCCGCCTC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAACTAATCCCAGCACTTTaGGAGGGCGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQLIPAL*EGEAGR
Trigger: TCTGCCCGCCTCGCCCTCTCAAAGTGCTGGGATTAG...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGTCAAACCATTAGAGTaGCCTGTGGTTCTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEVKPLE*PVVLSV
Trigger: CACTGAAAGAACCACAGGGCACTCTAATGGTTTGAC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACTTCTCGGACCAAGATaGGCCATGGGAGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRLLGPR*AMGGAG
Trigger: TCCTGCCCCTCCCATGGCCCATCTTGGTCCGAGAAG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGAGGCGGGTGGATCATaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHEAGGS*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCATGATCCACCCGCCTC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGATGTTGGATCATACTTaGAGGGACAAAGAAGGACCA +
Preference number: 2 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEMLDHT*RDKEGP
Trigger: TGGTCCTTCTTTGTCCCTGCAAGTATGATCCAACAT...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAAGCGAGCCGAGATCATaGCACTGCACTCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSEPRS*HCTPAW
Trigger: CCATGCTGGAGTGCAGTGGCATGATCTCGGCTCGCT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCCAGGAGGAGGAGGTTaGAGCGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCGCTGCAACCTCCTCCTCCTGG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAAAGCGGCTGCTCTTCTaGCTTTCTGCTGCTCGTGGT +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQKRLLF*LSAARG
Trigger: ACCACGAGCAGCAGAAAGGCAGAAGAGCAGCCGCTT...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCATTGAAAAGTCAGGAGTaGCACACTAAAGCACCCCCT +
Preference number: 2 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSLKSQE*HTKAPP
Trigger: AGGGGGTGCTTTAGTGTGGCACTCCTGACTTTTCAA...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAGACCAAGATGGGCCATaGGAGGGGCAGGAATTCCTT +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQDQDGP*EGQEFL
Trigger: AAGGAATTCCTGCCCCTCCCATGGCCCATCTTGGTC...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCAACATGTCATTGCCTaGGCCTTCCAGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHQHVIA*AFQPGR
Trigger: CCTGCCTGGCTGGAAGGCCCAGGCAATGACATGTTG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTATGTGGCCCAGGAGATaGTACGCAGCCTGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRMWPRR*YAAWVG
Trigger: CCCCACCCAGGCTGCGTATCATCTCCTGGGCCACAT...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTCCAGGGGCCAGGCTGTaGAAACACTCCCCATGGGCA +
Preference number: 2 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRPGARL*KHSPWA
Trigger: TGCCCATGGGGAGTGTTTTCACAGCCTGGCCCCTGG...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTGGCTAGCCTGGGGATaGCCACCCCCTTCTCGGACC +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFWLAWG*PPPSRT
Trigger: GGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAACAAGTCCCAGAGGACTaGTCCATTGGGAGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQQVPED*SIGSRE
Trigger: TTCCCTACTCCCAATGGAGCAGTCCTCTGGGACTTG...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACAGCAGTTCGATCTGTaGGTTCTGAGAGGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRQQFDL*VLRGVL
Trigger: CAGGACTCCTCTCAGAACCCACAGATCGAACTGCTG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCTCCAGAGGGGCACCTaGAGCTGTTCGCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHLQRGT*SCSPLP
Trigger: AGGCAGAGGCGAACAGCTCCAGGTGCCCCTCTGGAG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATGCAGACAGGGAACAGTaGGAGGAGCCCGTGACTAGA +
Preference number: 2 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHADREQ*EEPVTR
Trigger: TCTAGTCACGGGCTCCTCTCACTGTTCCCTGTCTGC...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCGATCACATCCAAGGCTaGGAGGGCCGGCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKADHIQG*EGRPSP
Trigger: AGGGGAGGGCCGGCCCTCTCAGCCTTGGATGTGATC...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTGATCACATCCAAGGCTaGGAGGGCCGGCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTDHIQG*EGRPSP
Trigger: AGGGGAGGGCCGGCCCTCTCAGCCTTGGATGTGATC...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCGGATGGTAAGGGGCTaGAGCGGCTGCTCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSRMVRG*SGCSSA
Trigger: GGCAGAAGAGCAGCCGCTTCAGCCCCTTACCATCCG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCGCTCCCTTGGGAGATaGGGTAGGGTAGCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHRSLGR*GRVAPE
Trigger: CTCTGGAGCTACCCTACCTCATCTCCCAAGGGAGCG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGCCAGGCATTCACCATaGTGTTTTGATGTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSARHSP*CFDVCF
Trigger: AAAACAGACATCAAAACAGCATGGTGAATGCCTGGC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAACTGAGAATGCTGAGTaGCAGGCATTCACCATGCTG +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQTENAE*QAFTML
Trigger: CAGCATGGTGAATGCCTGGCACTCAGCATTCTCAGT...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGGAAGCCCAATGATGTaGCAGCTACAGCAGTTCGAT +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRGSPMM*QLQQFD
Trigger: ATCGAACTGCTGTAGCTGGCACATCATTGGGCTTCC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAACTGAGGTGGGAGAATTaGTTGAATCCCAGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQLRWEN*LNPRGG
Trigger: TCCACCTCTGGGATTCAAGCAATTCTCCCACCTCAG...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCCAGGAGGAGGAGGTTaGAGCGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCGCTGCAACCTCCTCCTCCTGG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGATCCCTCTCCCAGGTGTaGGAAGGTCACTTTCACTAT +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSLSQV*EGHFHY
Trigger: ATAGTGAAAGTGACCTTCCCACACCTGGGAGAGGGA...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTCCAGGTGGCAGGAAGTaGCTTACACTAAGGGTTGAA +
Preference number: 2 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPPGGRK*LTLRVE
Trigger: TTCAACCCTTAGTGTAAGCCACTTCCTGCCACCTGG...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTACTGTGTTCCCACCTTaGCTCAGAGAGGATTTGGTC +
Preference number: 2 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPTVFPP*LREDLV
Trigger: GACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGT...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAAGAGAAGGGAAAATGTaGGCATTTCAGGACAAAACA +
Preference number: 2 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSREGKM*AFQDKT
Trigger: TGTTTTGTCCTGAAATGCTCACATTTTCCCTTCTCT...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGATTCGGTGGTGAGACGTaGCCTGGCCTGTTTCTGTAC +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRFGGET*PGLFLY
Trigger: GTACAGAAACAGGCCAGGGCACGTCTCACCACCGAA...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCGCCTCTGCCTCTTGTaGTTCAGAAGTCGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFRLCLL*FRSRSP
Trigger: GGGGCTGCGACTTCTGAAGCACAAGAGGCAGAGGCG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 90 bp GCTGCTCTTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATaGTTTCCTGTTGTTAATTGCGGCCCCATTCCATGTCTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: AALLPFCCSWFSLFR*FPVVNCGPIPCLSP
Trigger: TGGACTGAGACATGGAATGGGGCCGCAATTAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAAGAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCCTGAACTTCGGTGGTaGGACGTGCCCTGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTPELRW*DVPWPV
Trigger: AACAGGCCAGGGCACGTCTCACCACCGAAGTTCAGG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTGTCAAACCATTAGAGTaGCCTGTGGTTCTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPVKPLE*PVVLSV
Trigger: CACTGAAAGAACCACAGGGCACTCTAATGGTTTGAC...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCCAGGCACTGTGCTGTaGTCAGCACGTGTTACAGGC +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFPGTVL*SARVTG
Trigger: GCCTGTAACACGTGCTGAGCACAGCACAGTGCCTGG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAATGTCTCAGTCCAAACTaGGAGAGCAACATGTCATTG +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQCLSPN*ESNMSL
Trigger: CAATGACATGTTGCTCTCGCAGTTTGGACTGAGACA...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCAACATGTCATTGCCTaGGCCTTCCAGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSQHVIA*AFQPGR
Trigger: CCTGCCTGGCTGGAAGGCCCAGGCAATGACATGTTG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCCTTTCTGCTGCTCGTaGTTCAGTCTGTTCAGATTG +
Preference number: 2 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHPFCCS*FSLFRL
Trigger: CAATCTGAACAGACTGAACCACGAGCAGCAGAAAGG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGATCACATGTCTGGCCTTaGCCTGCTGAGAGATCACCA +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRSHVWP*PAERSP
Trigger: TGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGA...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 90 bp TGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTaGTTAATTGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGA +
Preference number: 2 (lower is better)
Translates to: CLSAARGSVCSDCFL*LIAAPFHVSVQTAR
Trigger: TCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCAATTAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGACCAAATGCCACCATaGCACAGAAGACATATTCTG +
Preference number: 2 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHDQMPP*HRRHIL
Trigger: CAGAATATGTCTTCTGTGTCATGGTGGCATTTGGTC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAGCTTACACTAAGGGTTaGAGCAAGGCAGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRAYTKG*SKAEKG
Trigger: TCCCTTCTCTGCCTTGCTTCAACCCTTAGTGTAAGC...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCAGAGCAACATGTCATTaGCTGGGCCTTCCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSRATCH*LGLPAR
Trigger: CCTGGCTGGAAGGCCCAGGCAATGACATGTTGCTCT...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACTGAGGTGGGAGAATTaGTTGAATCCCAGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRLRWEN*LNPRGG
Trigger: TCCACCTCTGGGATTCAAGCAATTCTCCCACCTCAG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAAAAGCGTATATGCTGTaGCCAGGTGGGTGGAACAGT +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRKAYML*PGGWNS
Trigger: ACTGTTCCACCCACCTGGGCACAGCATATACGCTTT...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCCACGGATAAGCCCATaGCATACACTGGGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAPRISP*HTLGWL
Trigger: GAGCCAGCCCAGTGTATGCCATGGGCTTATCCGTGG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCCACGGATAAGCCCATaGCATACACTGGGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTPRISP*HTLGWL
Trigger: GAGCCAGCCCAGTGTATGCCATGGGCTTATCCGTGG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAATGTTGGAATTTGTGGTaGTGGCTGCCTAGATTTGAA +
Preference number: 2 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQCWNLW*WLPRFE
Trigger: TTCAAATCTAGGCAGCCACCACCACAAATTCCAACA...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGAAAAGTCATCTTGTTaGAATTTGTGGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHREKSSC*NLWWWL
Trigger: CAGCCACCACCACAAATTCCAACAAGATGACTTTTC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACCAGGTGGCAGGAAGTaGCTTACACTAAGGGTTGAA +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRPGGRK*LTLRVE
Trigger: TTCAACCCTTAGTGTAAGCCACTTCCTGCCACCTGG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGGCTCAGAGAGGATTTaGTCACTTGCCAGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSGSERI*SLARVP
Trigger: TGGGACCCTGGCAAGTGACCAAATCCTCTCTGAGCC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGACCAAGATGGGCCATaGGAGGGGCAGGAATTCCTT +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSDQDGP*EGQEFL
Trigger: AAGGAATTCCTGCCCCTCCCATGGCCCATCTTGGTC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCTCGAGAGGCTGAGGTaGGAGAATTGCTTGAATCCC +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHLERLR*ENCLNP
Trigger: GGGATTCAAGCAATTCTCCCACCTCAGCCTCTCGAG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTGAACCACGTCATTCTTaGCCAGGGAGCCCCCATGAC +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTEPRHS*PGSPHD
Trigger: GTCATGGGGGCTCCCTGGCCAAGAATGACGTGGTTC...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCACCCAGGAAGCCCAATaGTGTGCCAGCTACAGCAGT +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKATQEAQ*CASYSS
Trigger: ACTGCTGTAGCTGGCACATCATTGGGCTTCCTGGGT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACGCTTACACTAAGGGTTaGAGCAAGGCAGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHAYTKG*SKAEKG
Trigger: TCCCTTCTCTGCCTTGCTTCAACCCTTAGTGTAAGC...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGGTGGGAGAATTGCTTaGATCCCAGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFGGRIA*IPEVEV
Trigger: AACCTCCACCTCTGGGATTCAAGCAATTCTCCCACC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCAGGTGGGTGGAACAGTaGCCTGCAAAACCACGCCAT +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKARWVEQ*PAKPRH
Trigger: ATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACCT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGTGATACCTACTAGTTaGCTTGTTGCTTTTCCCATT +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRVIPTS*LVAFPI
Trigger: AATGGGAAAAGCAACAAGGCAACTAGTAGGTATCAC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCCAAGATTGCACCACTaGACTCCAGCCTTGGGGACA +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAPRLHH*TPALGT
Trigger: TGTCCCCAAGGCTGGAGTGCAGTGGTGCAATCTTGG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGCAGACATAGTGAGGTaGACACAAGGGCCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFADIVR*TQGPLH
Trigger: GTGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGCAGACATAGTGAGGTaGACACAAGGGCCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSADIVR*TQGPLH
Trigger: GTGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTACAGCAGTTCGATCTGTaGGTTCTGAGAGGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLQQFDL*VLRGVL
Trigger: CAGGACTCCTCTCAGAACCCACAGATCGAACTGCTG...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 90 bp TCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTaGCAGCAGTATCTAGTCCAGGAGCTACCCCACCAAACTGAAGAG +
Preference number: 2 (lower is better)
Translates to: SARRNHLGFLRACFL*QQYLVQELPHQTEE
Trigger: CTCTTCAGTTTGGTGGGGTAGCTCCTGGACTAGATACTGCTGCAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGATCTTCACCAGTCAATTaGAAAGTCAGGAGTGCCACA +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRSSPVN*KVRSAT
Trigger: TGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGA...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAACTGAGAATGCTGAGTaGCAGGCATTCACCATGCTG +
Preference number: 2 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLTENAE*QAFTML
Trigger: CAGCATGGTGAATGCCTGGCACTCAGCATTCTCAGT...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGGAAGCCCAATGATGTaGCAGCTACAGCAGTTCGAT +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFGSPMM*QLQQFD
Trigger: ATCGAACTGCTGTAGCTGGCACATCATTGGGCTTCC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAATTTGTGGTGGTGGCTaGCTAGATTTGAAATTGTAT +
Preference number: 2 (lower is better)
Translates to: KVRSATLKHPLPSKERHRICGGG*LDLKLY
Trigger: ATACAATTTCAAATCTAGGCAGCCACCACCACAAAT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCTTCTGCCTTTCTGCTaGTCGTGGTTCAGTCTGTTC +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSLLPFC*SWFSLF
Trigger: GAACAGACTGAACCACGAGCAGCAGAAAGGCAGAAG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACATTCTGATTCTGAACTaGGCCATGTTGGATCATACT +
Preference number: 2 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHILILN*AMLDHT
Trigger: AGTATGATCCAACATGGCCCAGTTCAGAATCAGAAT...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTGGAATTTGTGGTGGTaGCTGCCTAGATTTGAAATT +
Preference number: 2 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHWNLWW*LPRFEI
Trigger: AATTTCAAATCTAGGCAGCCACCACCACAAATTCCA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCAAAATTAGCCAGGTGTaGTGGTGGGCGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFKISQV*WWAPVI
Trigger: GATTACAGGCGCCCACCACCACACCTGGCTAATTTT...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCAAAATTAGCCAGGTGTaGTGGTGGGCGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSKISQV*WWAPVI
Trigger: GATTACAGGCGCCCACCACCACACCTGGCTAATTTT...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTTCACATGTCTGGCCTTaGCCTGCTGAGAGATCACCA +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTSHVWP*PAERSP
Trigger: TGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGA...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 90 bp CAGAAGACATATTCTGATTCTGAACTGGGCCATGTTGGATCATACTaGCAGGGACAAAGAAGGACCATCACGCATTCACGACTAGGAAAC +
Preference number: 2 (lower is better)
Translates to: QKTYSDSELGHVGSY*QGQRRTITHSRLGN
Trigger: GTTTCCTAGTCGTGAATGCGTGATGGTCCTTCTTTGTCCCTGCAAGTATGATCCAACATGGCCCAGTTCAGAATCAGAATATGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCCACCATGGACCAAATaGCACCATGACACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTPPWTK*HHDTED
Trigger: GTCTTCTGTGTCATGGTGGCATTTGGTCCATGGTGG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCAAAGCGTATATGCTGTaGCCAGGTGGGTGGAACAGT +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAKAYML*PGGWNS
Trigger: ACTGTTCCACCCACCTGGGCACAGCATATACGCTTT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTTCTTTCTCCCACCATaGACCAAATGCCACCATGAC +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFFFLPP*TKCHHD
Trigger: GTCATGGTGGCATTTGGTCCATGGTGGGAGAAAGAA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCACTGTGTTCCCACCTTaGCTCAGAGAGGATTTGGTC +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKATVFPP*LREDLV
Trigger: GACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCCTTTCTGCTGCTCGTaGTTCAGTCTGTTCAGATTG +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFPFCCS*FSLFRL
Trigger: CAATCTGAACAGACTGAACCACGAGCAGCAGAAAGG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAACAACCCTTATACTATaGCTATTACGGTGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLTTLIL*LLRWGG
Trigger: ACCTCCCCACCGTAATAGTCATAGTATAAGGGTTGT...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATATCAGGCAGGTCTCCTaGGGCGTCTGTACAACCCTT +
Preference number: 2 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYIRQVS*GVCTTL
Trigger: AAGGGTTGTACAGACGCCTCAGGAGACCTGCCTGAT...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGTCTGTTTTTGATAGTTaGACACTGGGGCTGCCACGG +
Preference number: 2 (lower is better)
Translates to: VVSARRNHLGFLRACFLLSVFDS*TLGLPR
Trigger: CCGTGGCAGCCCCAGTGTGCAACTATCAAAAACAGA...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGATGGAATTTGTGGTGGTaGCTGCCTAGATTTGAAATT +
Preference number: 2 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRWNLWW*LPRFEI
Trigger: AATTTCAAATCTAGGCAGCCACCACCACAAATTCCA...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTCTTGTTGGAATTTGTaGTGGTGGCTGCCTAGATTT +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHSCWNL*WWLPRF
Trigger: AAATCTAGGCAGCCACCACCACAAATTCCAACAAGA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTCTTTCACTATGCTTGTaGACTAAATGCTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRLSLCL*TKCWLT
Trigger: TGTTAGCCAGCATTTAGTTCACAAGCATAGTGAAAG...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCTCTTCACCAGTCAATTaGAAAGTCAGGAGTGCCACA +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKASSPVN*KVRSAT
Trigger: TGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGA...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCAAGTCCCAGAGGACTaGTCCATTGGGAGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYQVPED*SIGSRE
Trigger: TTCCCTACTCCCAATGGAGCAGTCCTCTGGGACTTG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACGTGATACCTACTAGTTaGCTTGTTGCTTTTCCCATT +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHVIPTS*LVAFPI
Trigger: AATGGGAAAAGCAACAAGGCAACTAGTAGGTATCAC...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCTTTCCTGTTGTTAATTaGGGCCCCATTCCATGTCTC +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAFPVVN*GPIPCL
Trigger: GAGACATGGAATGGGGCCGCAATTAACAACAGGAAA...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTCCTCACTCCACCACTaGGAAAAGTTGATTTCTTTC +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFSSLHH*EKLISF
Trigger: GAAAGAAATCAACTTTTCCCAGTGGTGGAGTGAGGA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCTTCTGTACACCAAGGTaGAAGACTACAGCAAATGGA +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSFCTPR*KTTANG
Trigger: TCCATTTGCTGTAGTCTTCCACCTTGGTGTACAGAA...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCTTTCACTATGCTTGTaGACTAAATGCTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSLSLCL*TKCWLT
Trigger: TGTTAGCCAGCATTTAGTTCACAAGCATAGTGAAAG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCAAAGAGGAGCTTTATTaGAAGAGAATACCCCACTGG +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAKEELY*KRIPHW
Trigger: CCAGTGGGGTATTCTCTTTCAATAAAGCTCCTCTTT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTAAAGAGGAGCTTTATTaGAAGAGAATACCCCACTGG +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTKEELY*KRIPHW
Trigger: CCAGTGGGGTATTCTCTTTCAATAAAGCTCCTCTTT...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCGCCAGGCATTCACCATaGTGTTTTGATGTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAARHSP*CFDVCF
Trigger: AAAACAGACATCAAAACAGCATGGTGAATGCCTGGC...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCCACCATGGACCAAATaGCACCATGACACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYPPWTK*HHDTED
Trigger: GTCTTCTGTGTCATGGTGGCATTTGGTCCATGGTGG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTTGTATCCTATAATTTaGCCCATTTCCAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHLYPII*PISSEN
Trigger: GTTCTCACTGGAAATGGGGCAAATTATAGGATACAA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTTCCTCACTCCACCACTaGGAAAAGTTGATTTCTTTC +
Preference number: 2 (lower is better)
Translates to: LFLALAIPLQLRQTANRTSSLHH*EKLISF
Trigger: GAAAGAAATCAACTTTTCCCAGTGGTGGAGTGAGGA...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCGAAAAGTCATCTTGTTaGAATTTGTGGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAEKSSC*NLWWWL
Trigger: CAGCCACCACCACAAATTCCAACAAGATGACTTTTC...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 90 bp GAGTGTTTCCAGATGACAGCTTTAGCTGGGTCAGTTCTTGATTCCTaGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACT +
Preference number: 2 (lower is better)
Translates to: ECFQMTALAGSVLDS*LQLSQEIERSLSST
Trigger: AGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
3UTR-3UTR TCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCACATGCCTTCATTTTTaGACAGAATTATGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSTCLHF*TELCLH
Trigger: GTGCAAGCATAATTCTGTTCAAAAATGAAGGCATGT...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTCACATTCTTTTTCTTaGTCTGGCTATACCACTACA +
Preference number: 2 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFSHSFS*SGYTTT
Trigger: TGTAGTGGTATAGCCAGAGCAAGAAAAAGAATGTGA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CAGCAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTCTCACCTCTTCCTTCTaGCTCAATTGTAAAAGCATT +
Preference number: 2 (lower is better)
Translates to: QQDLLVQIEVYFHCLVKLLTSSF*LNCKSI
Trigger: AATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG...AAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
3UTR-3UTR CCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCCGAAGAAATCATCTTaGTTTCCTTCGTGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAPKKSS*FPSCLF
Trigger: AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 90 bp CAGATGACAGCTTTAGCTGGGTCAGTTCTTGATTCCTTGCTTCAATaGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: QMTALAGSVLDSLLQ*SQEIERSLSSTAEN
Trigger: ATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
3UTR-3UTR TCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATGACCAAATGCCACCATaGCACAGAAGACATATTCTG +
Preference number: 2 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYDQMPP*HRRHIL
Trigger: CAGAATATGTCTTCTGTGTCATGGTGGCATTTGGTC...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCTTGTATCCTATAATTTaGCCCATTTCCAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: HRILCLGNMFSCPEVFKALYPII*PISSEN
Trigger: GTTCTCACTGGAAATGGGGCAAATTATAGGATACAA...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR GCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATATGTTGGATCATACTTaGAGGGACAAAGAAGGACCA +
Preference number: 2 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYMLDHT*RDKEGP
Trigger: TGGTCCTTCTTTGTCCCTGCAAGTATGATCCAACAT...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATATTCTGATTCTGAACTaGGCCATGTTGGATCATACT +
Preference number: 2 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYILILN*AMLDHT
Trigger: AGTATGATCCAACATGGCCCAGTTCAGAATCAGAAT...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 72 bp GACCCCACTCTGGGCTGTGGCCGCTCCCTTGGGAGATaGGGTAGGGTAGCTCCAGAGGGGCACCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: DPTLGCGRSLGR*GRVAPEGHLEL
Trigger: CAGCTCCAGGTGCCCCTCTGGAGCTACCCTACCTCATCTCCCAAGGGAGCGGCCACAGCCCAGAGTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp GAGAGATCACCAGGGAATCACGGCAGCTTTGCAGCATaGCCTCCCCGCTGGCCTGCCCACGGAGTTGCTCCC +
Preference number: 3 (lower is better)
Translates to: ERSPGNHGSFAA*PPRWPAHGVAP
Trigger: GGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCCCTGGTGATCTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 72 bp GCCACACAGGTCAGAAGTGGCTGGCTAGCCTGGGGATaGCCACCCCCTTCTCGGACCAAGATGGGCCATGGG +
Preference number: 3 (lower is better)
Translates to: ATQVRSGWLAWG*PPPSRTKMGHG
Trigger: CCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAGCCACTTCTGACCTGTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp GGGAATCACGGCAGCTTTGCAGCATGGCCTCCCCGCTaGCCTGCCCACGGAGTTGCTCCCATGTTTTCCCAC +
Preference number: 3 (lower is better)
Translates to: GNHGSFAAWPPR*PAHGVAPMFSH
Trigger: GTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp GGTAGCTCCAGAGGGGCACCTGGAGCTGTTCGCCTCTaGCTCTTGTGCTTCAGAAGTCGCAGCCCCTACAGG +
Preference number: 3 (lower is better)
Translates to: GSSRGAPGAVRL*LLCFRSRSPYR
Trigger: CCTGTAGGGGCTGCGACTTCTGAAGCACAAGAGGCAGAGGCGAACAGCTCCAGGTGCCCCTCTGGAGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACCTAATCCCAGCACTTaGAGAGGGCGAGGCGGGCAG +
Preference number: 3 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSPNPST*RGRGGQ
Trigger: CTGCCCGCCTCGCCCTCTCAAAGTGCTGGGATTAGG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGGCCTGCCCACGGAGTaGCTCCCATGTTTTCCCACT +
Preference number: 3 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSGLPTE*LPCFPT
Trigger: AGTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp AGAGGGGCACCTGGAGCTGTTCGCCTCTGCCTCTTGTaGTTCAGAAGTCGCAGCCCCTACAGGATTATGGGG +
Preference number: 3 (lower is better)
Translates to: RGAPGAVRLCLL*FRSRSPYRIMG
Trigger: CCCCATAATCCTGTAGGGGCTGCGACTTCTGAAGCACAAGAGGCAGAGGCGAACAGCTCCAGGTGCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGCCCGAAGAAATCATCTaGGTTTCCTTCGTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEPEEII*VSFVLV
Trigger: AACAAGCACGAAGGAAACCAAGATGATTTCTTCGGG...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp ATGAAGTCCTCAAGGCCTTCCTCACATGTCTGGCCTTaGCCTGCTGAGAGATCACCAGGGAATCACGGCAGC +
Preference number: 3 (lower is better)
Translates to: MKSSRPSSHVWP*PAERSPGNHGS
Trigger: GCTGCCGTGATTCCCTGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGAGGAAGGCCTTGAGGACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGTGGTTTCCTTCGTGCTaGTTTTCTTTTGCAGCAGTA +
Preference number: 3 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEWFPSC*FSFAAV
Trigger: TACTGCTGCAAAAGAAAACAAGCACGAAGGAAACCA...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 72 bp TCTGTGGGTTCTGAGAGGAGTCCTGAACTTCGGTGGTaGGACGTGCCCTGGCCTGTTTCTGTACACCAAGGT +
Preference number: 3 (lower is better)
Translates to: SVGSERSPELRW*DVPWPVSVHQG
Trigger: ACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAGGACTCCTCTCAGAACCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp GTTCTGAGAGGAGTCCTGAACTTCGGTGGTGAGACGTaGCCTGGCCTGTTTCTGTACACCAAGGTGGAAGAC +
Preference number: 3 (lower is better)
Translates to: VLRGVLNFGGET*PGLFLYTKVED
Trigger: GTCTTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAGGACTCCTCTCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp AAGTGTATGTGGCAGAATTCCCAAGTCCCAGAGGACTaGTCCATTGGGAGTAGGGAAGACCCAGAGCACGGC +
Preference number: 3 (lower is better)
Translates to: KCMWQNSQVPED*SIGSREDPEHG
Trigger: GCCGTGCTCTGGGTCTTCCCTACTCCCAATGGAGCAGTCCTCTGGGACTTGGGAATTCTGCCACATACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp GTCTCGGATGGTAAGGGGCTGAAGCGGCTGCTCTTCTaGCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGAT +
Preference number: 3 (lower is better)
Translates to: VSDGKGLKRLLF*LSAARGSVCSD
Trigger: ATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAAGAGCAGCCGCTTCAGCCCCTTACCATCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp AGCCAGGCTGGTAAGCAGTTGCCAGGTGGCAGGAAGTaGCTTACACTAAGGGTTGAAGCAAGGCAGAGAAGG +
Preference number: 3 (lower is better)
Translates to: SQAGKQLPGGRK*LTLRVEARQRR
Trigger: CCTTCTCTGCCTTGCTTCAACCCTTAGTGTAAGCCACTTCCTGCCACCTGGCAACTGCTTACCAGCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp GTTAATTGCGGCCCCATTCCATGTCTCAGTCCAAACTaGGAGAGCAACATGTCATTGCCTGGGCCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: VNCGPIPCLSPN*ESNMSLPGPSS
Trigger: GCTGGAAGGCCCAGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCAATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp AGCCCAATGATGTGCCAGCTACAGCAGTTCGATCTGTaGGTTCTGAGAGGAGTCCTGAACTTCGGTGGTGAG +
Preference number: 3 (lower is better)
Translates to: SPMMCQLQQFDL*VLRGVLNFGGE
Trigger: CTCACCACCGAAGTTCAGGACTCCTCTCAGAACCCACAGATCGAACTGCTGTAGCTGGCACATCATTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp CACAGAATGAAGTCCTCAAGGCCTTCCTCACATGTCTaGCCTTGGCCTGCTGAGAGATCACCAGGGAATCAC +
Preference number: 3 (lower is better)
Translates to: HRMKSSRPSSHV*PWPAERSPGNH
Trigger: GTGATTCCCTGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGAGGAAGGCCTTGAGGACTTCATTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACTGAACTGGGCCATGTaGGATCATACTTGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: KVRSATLKHPLPSKERHRLNWAM*DHTCRD
Trigger: GTCCCTGCAAGTATGATCCAACATGGCCCAGTTCAG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACAGGCTGGTAAGCAGTaGCCAGGTGGCAGGAAGTGG +
Preference number: 3 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRQAGKQ*PGGRKW
Trigger: CCACTTCCTGCCACCTGGCAACTGCTTACCAGCCTG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp GGAAGAGAAAAAGCGTATATGCTGTGCCCAGGTGGGTaGAACAGTGACCTGCAAAACCACGCCATAGCTGAG +
Preference number: 3 (lower is better)
Translates to: GREKAYMLCPGG*NSDLQNHAIAE
Trigger: CTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACCTGGGCACAGCATATACGCTTTTTCTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGCAGGTCAGAACAGGTaGTATCAGCCCGAAGAAATC +
Preference number: 3 (lower is better)
Translates to: KVRSATLKHPLPSKERHRAGQNR*YQPEEI
Trigger: GATTTCTTCGGGCTGATACAACCTGTTCTGACCTGC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAACATGTTGGATCATACTaGCAGGGACAAAGAAGGACC +
Preference number: 3 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEHVGSY*QGQRRT
Trigger: GGTCCTTCTTTGTCCCTGCAAGTATGATCCAACATG...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGGAATCACGGCAGCTTaGCAGCATGGCCTCCCCGCT +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSGITAA*QHGLPA
Trigger: AGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAACGTGCTTGTTTTCTTTaGCAGCAGTATCTAGTCCAG +
Preference number: 3 (lower is better)
Translates to: LNFGGETCPGLFLYTKVERACFL*QQYLVQ
Trigger: CTGGACTAGATACTGCTGCAAAAGAAAACAAGCACG...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCCCAGGAGGAGGAGGTaGCAGCGAGCCGAGATCATG +
Preference number: 3 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAPRRRR*QRAEIM
Trigger: CATGATCTCGGCTCGCTGCAACCTCCTCCTCCTGGG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGGCCTGCCCACGGAGTaGCTCCCATGTTTTCCCACT +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSGLPTE*LPCFPT
Trigger: AGTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 72 bp AGTGAGGTGCACACAAGGGCCTCTTCACCAGTCAATTaGAAAGTCAGGAGTGCCACACTAAAGCACCCCCTT +
Preference number: 3 (lower is better)
Translates to: SEVHTRASSPVN*KVRSATLKHPL
Trigger: AAGGGGGTGCTTTAGTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp AAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTaGCACACTAAAGCACCCCCTTCCATCCAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: KGLFTSQLKSQE*HTKAPPSIQGE
Trigger: CTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAACCCGAAGAAATCATCTaGGTTTCCTTCGTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQPEEII*VSFVLV
Trigger: AACAAGCACGAAGGAAACCAAGATGATTTCTTCGGG...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp TCTTGTGCTTCAGAAGTCGCAGCCCCTACAGGATTATaGGGAAGAGAAAAAGCGTATATGCTGTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: SCASEVAAPTGL*GREKAYMLCPG
Trigger: ACCTGGGCACAGCATATACGCTTTTTCTCTTCCCCATAATCCTGTAGGGGCTGCGACTTCTGAAGCACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGCTGAGGTGGGAGAATaGCTTGAATCCCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFAEVGE*LESQRW
Trigger: CCACCTCTGGGATTCAAGCAATTCTCCCACCTCAGC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 72 bp CAACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTaGAACCCAACAAAAGCAGAATCACTCTGCACTCAC +
Preference number: 3 (lower is better)
Translates to: QPPGSESAYGFP*NPTKAESLCTH
Trigger: GTGAGTGCAGAGTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp GCTGAAGCGGCTGCTCTTCTGCCTTTCTGCTGCTCGTaGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAAT +
Preference number: 3 (lower is better)
Translates to: AEAAALLPFCCS*FSLFRLFPVVN
Trigger: ATTAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAAGAGCAGCCGCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAGGGAAGGTAGGATTTTaGCAGGTCAGAACAGGTTGT +
Preference number: 3 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRGKVGF*QVRTGC
Trigger: ACAACCTGTTCTGACCTGCAAAAATCCTACCTTCCC...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACATGTTGGATCATACTaGCAGGGACAAAGAAGGACC +
Preference number: 3 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRHVGSY*QGQRRT
Trigger: GGTCCTTCTTTGTCCCTGCAAGTATGATCCAACATG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACAACTGTGTTCCCACCTaGGCTCAGAGAGGATTTGGT +
Preference number: 3 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHNCVPT*AQRGFG
Trigger: ACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGTT...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTGCTGAGGTGGGAGAATaGCTTGAATCCCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LFLALAIPLQLRQTANRTAEVGE*LESQRW
Trigger: CCACCTCTGGGATTCAAGCAATTCTCCCACCTCAGC...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACGTGCTTGTTTTCTTTaGCAGCAGTATCTAGTCCAG +
Preference number: 3 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRRACFL*QQYLVQ
Trigger: CTGGACTAGATACTGCTGCAAAAGAAAACAAGCACG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGCAGGTCAGAACAGGTaGTATCAGCCCGAAGAAATC +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSAGQNR*YQPEEI
Trigger: GATTTCTTCGGGCTGATACAACCTGTTCTGACCTGC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCTGAACTGGGCCATGTaGGATCATACTTGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: LFLALAIPLQLRQTANRTLNWAM*DHTCRD
Trigger: GTCCCTGCAAGTATGATCCAACATGGCCCAGTTCAG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCAGGCTGGTAAGCAGTaGCCAGGTGGCAGGAAGTGG +
Preference number: 3 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYQAGKQ*PGGRKW
Trigger: CCACTTCCTGCCACCTGGCAACTGCTTACCAGCCTG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp ATTCTGATTCTGAACTGGGCCATGTTGGATCATACTTaGAGGGACAAAGAAGGACCATCACGCATTCACGAC +
Preference number: 3 (lower is better)
Translates to: ILILNWAMLDHT*RDKEGPSRIHD
Trigger: GTCGTGAATGCGTGATGGTCCTTCTTTGTCCCTGCAAGTATGATCCAACATGGCCCAGTTCAGAATCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp TGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAATTaGGGCCCCATTCCATGTCTCAGTCCAAACTGCGAG +
Preference number: 3 (lower is better)
Translates to: WFSLFRLFPVVN*GPIPCLSPNCE
Trigger: CTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCAATTAACAACAGGAAACAATCTGAACAGACTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGGGAAGGTAGGATTTTaGCAGGTCAGAACAGGTTGT +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSGKVGF*QVRTGC
Trigger: ACAACCTGTTCTGACCTGCAAAAATCCTACCTTCCC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCAACTGTGTTCCCACCTaGGCTCAGAGAGGATTTGGT +
Preference number: 3 (lower is better)
Translates to: HRILCLGNMFSCPEVFKANCVPT*AQRGFG
Trigger: ACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGTT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTCTGGTGTGGCTTCCTaGGAAAAGAGGAGCTTTATT +
Preference number: 3 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHSGVAS*EKRSFI
Trigger: AATAAAGCTCCTCTTTTCCAAGGAAGCCACACCAGA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCTCTTCACCAGTCAATaGAAAAGTCAGGAGTGCCAC +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSLFTSQ*KSQECH
Trigger: GTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCCACTGTCAGGGCTTTaGCTGAATGTCAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFPLSGL*LNVKGK
Trigger: TTTTCCCTTGACATTCAGCAAAAGCCCTGACAGTGG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp ACTAAATGCTGGCTAACAAGTGTCAAACCATTAGAGTaGCCTGTGGTTCTTTCAGTGGTAACAGTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: TKCWLTSVKPLE*PVVLSVVTVPG
Trigger: CCCTGGAACTGTTACCACTGAAAGAACCACAGGGCACTCTAATGGTTTGACACTTGTTAGCCAGCATTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CCA 72 bp CCACTGGTCTTCATCTCTGTTCTGGTGTGGCTTCCTTaGAAAAGAGGAGCTTTATTGAAAGAGAATACCCCA +
Preference number: 3 (lower is better)
Translates to: PLVFISVLVWLP*KRGALLKENTP
Trigger: TGGGGTATTCTCTTTCAATAAAGCTCCTCTTTTCCAAGGAAGCCACACCAGAACAGAGATGAAGACCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR TCA 72 bp CTCCCAGGTGTGGGAAGGTCACTTTCACTATGCTTGTaGACTAAATGCTGGCTAACAAGTGTCAAACCATTA +
Preference number: 3 (lower is better)
Translates to: LPGVGRSLSLCL*TKCWLTSVKPL
Trigger: TAATGGTTTGACACTTGTTAGCCAGCATTTAGTTCACAAGCATAGTGAAAGTGACCTTCCCACACCTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCTCAGATTGTTTCCTGTaGTTAATTGCGGCCCCATTC +
Preference number: 3 (lower is better)
Translates to: HRILCLGNMFSCPEVFKASDCFL*LIAAPF
Trigger: GAATGGGGCCGCAATTAACAACAGGAAACAATCTGA...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTGCCTAGATTTGAAATaGTATCCTATAATTTGCCCC +
Preference number: 3 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHCLDLK*YPIICP
Trigger: GGGGCAAATTATAGGATACAATTTCAAATCTAGGCA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGTAGCTAATATTCTATaGAGTGTTTGCTGTGTGCCA +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSVANIL*SVCCVP
Trigger: TGGCACACAGCAAACACTCAATAGAATATTAGCTAC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp CAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTaGCTTGTGAAGCTTGCTTTTGTAGGCATTGAGAAC +
Preference number: 3 (lower is better)
Translates to: QDLLVQIEVYFH*LVKLAFVGIEN
Trigger: GTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCTGCCTAGATTTGAAATaGTATCCTATAATTTGCCCC +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSCLDLK*YPIICP
Trigger: GGGGCAAATTATAGGATACAATTTCAAATCTAGGCA...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCATAGAATCCTCTGTCTaGGAAATATGTTCTCATGTC +
Preference number: 3 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSIESSV*EICSHV
Trigger: GACATGAGAACATATTTCCAAGACAGAGGATTCTAT...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp AAACATGAAGGACTGCCTCTCATTAAGAAATATGTTTaGCCTTCCAAAGTTGGTGTAACATCTATTGAGTGC +
Preference number: 3 (lower is better)
Translates to: KHEGLPLIKKYV*PSKVGVTSIEC
Trigger: GCACTCAATAGATGTTACACCAACTTTGGAAGGGCAAACATATTTCTTAATGAGAGGCAGTCCTTCATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR GCA 72 bp CATCCAATCATTTGTCCTAAATCACATTCTTTTTCTTaGTCTGGCTATACCACTACAGTTAAGACAAACTGC +
Preference number: 3 (lower is better)
Translates to: HPIICPKSHSFS*SGYTTTVKTNC
Trigger: GCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAGAATGTGATTTAGGACAAATGATTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGGCAGCTTTGCAGCATaGCCTCCCCGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEGSFAA*PPRWPA
Trigger: GGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp GGCCTGCTGAGAGATCACCAGGGAATCACGGCAGCTTaGCAGCATGGCCTCCCCGCTGGCCTGCCCACGGAG +
Preference number: 4 (lower is better)
Translates to: GLLRDHQGITAA*QHGLPAGLPTE
Trigger: CTCCGTGGGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCCCTGGTGATCTCTCAGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGATCACATCCAAGGCTaGGAGGGCCGGCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEDHIQG*EGRPSP
Trigger: AGGGGAGGGCCGGCCCTCTCAGCCTTGGATGTGATC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGATGTGGCCCAGGAGATaGTACGCAGCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEMWPRR*YAAWVG
Trigger: CCCCACCCAGGCTGCGTATCATCTCCTGGGCCACAT...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGCGCTCCCTTGGGAGATaGGGTAGGGTAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWERSLGR*GRVAPE
Trigger: CTCTGGAGCTACCCTACCTCATCTCCCAAGGGAGCG...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGAGCCTCTTATTCACTaGCTCGGCTTTGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEEPLIH*LGFGPV
Trigger: GACCGGGCCAAAGCCGAGGCAGTGAATAAGAGGCTC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGTGGTCTGTAAGCCGTaGCCTGCCTCTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEVVCKP*PASGYF
Trigger: GAAGTAGCCAGAGGCAGGCCACGGCTTACAGACCAC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGCCACGGATAAGCCCATaGCATACACTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEPRISP*HTLGWL
Trigger: GAGCCAGCCCAGTGTATGCCATGGGCTTATCCGTGG...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCCCAGGAGCTCCGGGTaGCGGCGGCCACGCGTCACT +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHPRSSG*RRPRVT
Trigger: AGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGGCAGCTTTGCAGCATaGCCTCCCCGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEGSFAA*PPRWPA
Trigger: GGCAGGCCAGCGGGGAGGCCATGCTGCAAAGCTGCC...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGCTGTGCCCAGGTGGGTaGAACAGTGACCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWELCPGG*NSDLQN
Trigger: GTTTTGCAGGTCACTGTTCCACCCACCTGGGCACAG...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGTGCCTATTTTGTACTaGGTCCTCTGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEVPILY*VLCQVG
Trigger: CCCCACCTGGCAGAGGACCCAGTACAAAATAGGCAC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGATCACATCCAAGGCTaGGAGGGCCGGCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEDHIQG*EGRPSP
Trigger: AGGGGAGGGCCGGCCCTCTCAGCCTTGGATGTGATC...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGAGGCGGGTGGATCATaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSEAGGS*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCATGATCCACCCGCCTC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAAGCGGCCCCTGCCAATaGCGTGTGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSGPCQ*RVPRSS
Trigger: GGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGATGCCGAAGCGGCCCCTaGCAATGCCGTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRCRSGP*QCRVPR
Trigger: CCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCA...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGCAAGTCCCAGAGGACTaGTCCATTGGGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEQVPED*SIGSRE
Trigger: TTCCCTACTCCCAATGGAGCAGTCCTCTGGGACTTG...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTGCCTCCCCGCTGGCCTaGCCACGGAGTTGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPASPLA*PRSCSH
Trigger: ATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGC...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACGCCTCTGCCTCTTGTaGTTCAGAAGTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSRLCLL*FRSRSP
Trigger: GGGGCTGCGACTTCTGAAGCACAAGAGGCAGAGGCG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGTACCTGTCCGGGATTTaGATCTACGCCTGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEYLSGI*IYACLE
Trigger: TTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTA...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR CCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAACCCCACTCTGGGCTGTaGCCGCTCCCTTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEPHSGL*PLPWEM
Trigger: CATCTCCCAAGGGAGCGGCCACAGCCCAGAGTGGGG...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp TGTGGCAGAATTCCCAAGTCCCAGAGGACTGCTCCATaGGGAGTAGGGAAGACCCAGAGCACGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CGRIPKSQRTAP*GVGKTQSTASQ
Trigger: CTGGCTGGCCGTGCTCTGGGTCTTCCCTACTCCCAATGGAGCAGTCCTCTGGGACTTGGGAATTCTGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGATGGCTAGCCTGGGGATaGCCACCCCCTTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRWLAWG*PPPSRT
Trigger: GGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCA...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGAACCACGTCATTCTTaGCCAGGGAGCCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSEPRHS*PGSPHD
Trigger: GTCATGGGGGCTCCCTGGCCAAGAATGACGTGGTTC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACCCCACTCTGGGCTGTaGCCGCTCCCTTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRPHSGL*PLPWEM
Trigger: CATCTCCCAAGGGAGCGGCCACAGCCCAGAGTGGGG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAATGTGGCCCAGGAGATaGTACGCAGCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRMWPRR*YAAWVG
Trigger: CCCCACCCAGGCTGCGTATCATCTCCTGGGCCACAT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGAGGCGGGTGGATCATaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEEAGGS*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCATGATCCACCCGCCTC...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAAGGTGGGTGGAACAGTaGCCTGCAAAACCACGCCAT +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSRWVEQ*PAKPRH
Trigger: ATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACCT...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGTTTCAGCCTCCTCAATaGTCGCCTGTGCATAATCTG +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEFQPPQ*SPVHNL
Trigger: CAGATTATGCACAGGCGATCATTGAGGAGGCTGAAA...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTCCCAGGAGCTCCGGGTaGCGGCGGCCACGCGTCACT +
Preference number: 4 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRPRSSG*RRPRVT
Trigger: AGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGG...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGACCAAGATGGGCCATaGGAGGGGCAGGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSDQDGP*EGQEFL
Trigger: AAGGAATTCCTGCCCCTCCCATGGCCCATCTTGGTC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACTGTGCCCAGGTGGGTaGAACAGTGACCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSLCPGG*NSDLQN
Trigger: GTTTTGCAGGTCACTGTTCCACCCACCTGGGCACAG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACTCCAGAGGGGCACCTaGAGCTGTTCGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRLQRGT*SCSPLP
Trigger: AGGCAGAGGCGAACAGCTCCAGGTGCCCCTCTGGAG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp TCCAGAGGGGCACCTGGAGCTGTTCGCCTCTGCCTCTaGTGCTTCAGAAGTCGCAGCCCCTACAGGATTATG +
Preference number: 4 (lower is better)
Translates to: SRGAPGAVRLCL*CFRSRSPYRIM
Trigger: CATAATCCTGTAGGGGCTGCGACTTCTGAAGCACAAGAGGCAGAGGCGAACAGCTCCAGGTGCCCCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGGAGCTGTTCGCCTCTaGCTCTTGTGCTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSGAVRL*LLCFRS
Trigger: ACTTCTGAAGCACAAGAGGCAGAGGCGAACAGCTCC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAAGCTCCGACCCTTCATaGGAGTCGGAGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSSDPS*ESERTL
Trigger: GAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTACCAGCCCGCACAGCTaGATAACAGGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPTSPHS*ITGSSS
Trigger: GCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGT...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAGCCGTGGCCTGCCTCTaGCTACTTCCCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQAVACL*LLPSKV
Trigger: TACCTTGCTGGGAAGTAGCCAGAGGCAGGCCACGGC...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGTGGTCTGTAAGCCGTaGCCTGCCTCTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEVVCKP*PASGYF
Trigger: GAAGTAGCCAGAGGCAGGCCACGGCTTACAGACCAC...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGTTCAGAATCTGCCTATaGGTTTCCCTGAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEFRICL*VSLKPN
Trigger: GTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAA...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAACAGAGTTTACATAGCTaGGCTCCTCCACCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQQSLHS*APPPAR
Trigger: GCGGGCTGGTGGAGGAGCTCAGCTATGTAAACTCTG...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGCAGACAGGGAACAGTaGGAGGAGCCCGTGACTAGA +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRADREQ*EEPVTR
Trigger: TCTAGTCACGGGCTCCTCTCACTGTTCCCTGTCTGC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAATCAGGCAGGTCTCCTaGGGCGTCTGTACAACCCTT +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEIRQVS*GVCTTL
Trigger: AAGGGTTGTACAGACGCCTCAGGAGACCTGCCTGAT...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACAGCGGCCCCTGCCAATaGCGTGTGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHSGPCQ*RVPRSS
Trigger: GGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCT...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAACCAGGCACTGTGCTGTaGTCAGCACGTGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQPGTVL*SARVTG
Trigger: GCCTGTAACACGTGCTGAGCACAGCACAGTGCCTGG...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGAATCACGGCAGCTTTaGAGCATGGCCTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHESRQL*SMASPL
Trigger: CAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCGCCTCTGCCTCTTGTaGTTCAGAAGTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHRLCLL*FRSRSP
Trigger: GGGGCTGCGACTTCTGAAGCACAAGAGGCAGAGGCG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACAGCTCCGACCCTTCATaGGAGTCGGAGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHSSDPS*ESERTL
Trigger: GAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCT...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGTAAGTCATCACCTGTaGTGCCCGGAACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRVSHHL*CPELGQ
Trigger: CTGGCCGAGTTCCGGGCACCACAGGTGATGACTTAC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTCCACGGATAAGCCCATaGCATACACTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPPRISP*HTLGWL
Trigger: GAGCCAGCCCAGTGTATGCCATGGGCTTATCCGTGG...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGCAGACAGGGAACAGTaGGAGGAGCCCGTGACTAGA +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHADREQ*EEPVTR
Trigger: TCTAGTCACGGGCTCCTCTCACTGTTCCCTGTCTGC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATCCAGGGGCCAGGCTGTaGAAACACTCCCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHPGARL*KHSPWA
Trigger: TGCCCATGGGGAGTGTTTTCACAGCCTGGCCCCTGG...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACGGATGGTAAGGGGCTaGAGCGGCTGCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRRMVRG*SGCSSA
Trigger: GGCAGAAGAGCAGCCGCTTCAGCCCCTTACCATCCG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAGGTAGGAGAATCGCTTaGACCCAGGAGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQGRRIA*TQEEEV
Trigger: AACCTCCTCCTCCTGGGTTCAAGCGATTCTCCTACC...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTGGTAGGAGAATCGCTTaGACCCAGGAGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPGRRIA*TQEEEV
Trigger: AACCTCCTCCTCCTGGGTTCAAGCGATTCTCCTACC...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGCCTATGGGTTTCCCTaGAACCCAACAAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSAYGFP*NPTKAE
Trigger: TTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTTTCGGTGGTGAGACGTaGCCTGGCCTGTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPFGGET*PGLFLY
Trigger: GTACAGAAACAGGCCAGGGCACGTCTCACCACCGAA...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAAGAGCAACATGTCATTaGCTGGGCCTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRRATCH*LGLPAR
Trigger: CCTGGCTGGAAGGCCCAGGCAATGACATGTTGCTCT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTCCAAGATTGCACCACTaGACTCCAGCCTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPPRLHH*TPALGT
Trigger: TGTCCCCAAGGCTGGAGTGCAGTGGTGCAATCTTGG...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAGCCTCCCCGCTGGCCTaGCCACGGAGTTGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLASPLA*PRSCSH
Trigger: ATGGGAGCAACTCCGTGGGCAGGCCAGCGGGGAGGC...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGTAACATCTATTGAGTaGCTATTTTGTACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEVTSIE*LFCTGS
Trigger: GGACCCAGTACAAAATAGGCACTCAATAGATGTTAC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGGCTCAGAGAGGATTTaGTCACTTGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRGSERI*SLARVP
Trigger: TGGGACCCTGGCAAGTGACCAAATCCTCTCTGAGCC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTGGCTCAGAGAGGATTTaGTCACTTGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPGSERI*SLARVP
Trigger: TGGGACCCTGGCAAGTGACCAAATCCTCTCTGAGCC...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGCATGGCCTCCCCGCTaGCCTGCCCACGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSAWPPR*PAHGVA
Trigger: AGCAACTCCGTGGGCAGGCCAGCGGGGAGGCCATGC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTCCTTTCCCACATCCTaGTGCTCTTCTCCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHSFPTS*CSSPGP
Trigger: CGGACCTGGAGAAGAGCATCAGGATGTGGGAAAGGA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATCCTGAACTTCGGTGGTaGGACGTGCCCTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHPELRW*DVPWPV
Trigger: AACAGGCCAGGGCACGTCTCACCACCGAAGTTCAGG...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTATGGCTAGCCTGGGGATaGCCACCCCCTTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLWLAWG*PPPSRT
Trigger: GGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCA...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTCGGATGGTAAGGGGCTaGAGCGGCTGCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRRMVRG*SGCSSA
Trigger: GGCAGAAGAGCAGCCGCTTCAGCCCCTTACCATCCG...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACTAATCCCAGCACTTTaGGAGGGCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRLIPAL*EGEAGR
Trigger: TCTGCCCGCCTCGCCCTCTCAAAGTGCTGGGATTAG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CGTAATTTCTCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCAGCGGCCCCTGCCAATaGCGTGTGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RNFSFILSLRRFMSSMYFSGPCQ*RVPRSS
Trigger: GGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCT...GAAATACATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR GCA 90 bp TCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCATCACTTTCTGCCGAAGCGGCCCCTaGCAATGCCGTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFILSLRRFMSSMYFITFCRSGP*QCRVPR
Trigger: CCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCA...GAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR GCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGAGGTATATTTCCATTaGCTTGTGAAGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEEVYFH*LVKLAF
Trigger: AAAAGCAAGCTTCACAAGGCAATGGAAATATACCTC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATAGTCATCACCTGTGGTaGCCGGAACTCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHSHHLW*PELGQL
Trigger: CAGCTGGCCGAGTTCCGGGCACCACAGGTGATGACT...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGATTTGTGGTGGTGGCTaGCTAGATTTGAAATTGTAT +
Preference number: 4 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEICGGG*LDLKLY
Trigger: ATACAATTTCAAATCTAGGCAGCCACCACCACAAAT...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATCCAGGAGGAGGAGGTTaGAGCGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCGCTGCAACCTCCTCCTCCTGG...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAGCAGACATAGTGAGGTaGACACAAGGGCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQADIVR*TQGPLH
Trigger: GTGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGC...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGAGAAAAAGCGTATATaGTGTGCCCAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEEKKRI*CAQVGG
Trigger: TCCACCCACCTGGGCACAGCATATACGCTTTTTCTC...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CCCTCCGGCGGTTCATGTCCTCAATGTATTTCATCACTTTCTGAGTGGCCAAAAAGCTCCGACCCTTCATaGGAGTCGGAGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: PSGGSCPQCISSLSEWPKSSDPS*ESERTL
Trigger: GAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCT...TTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTCAGCAGTTCGATCTGTaGGTTCTGAGAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPQQFDL*VLRGVL
Trigger: CAGGACTCCTCTCAGAACCCACAGATCGAACTGCTG...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGACCAAGATGGGCCATaGGAGGGGCAGGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHDQDGP*EGQEFL
Trigger: AAGGAATTCCTGCCCCTCCCATGGCCCATCTTGGTC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAATCACATGTCTGGCCTTaGCCTGCTGAGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQSHVWP*PAERSP
Trigger: TGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGA...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCCTTCCTCACATGTCTaGCCTTGGCCTGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHPSSHV*PWPAER
Trigger: TCTCTCAGCAGGCCAAGGCCAGACATGTGAGGAAGG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp TCAGCACGTGTTACAGGCATTAACTGTGTTCCCACCTaGGCTCAGAGAGGATTTGGTCACTTGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SARVTGINCVPT*AQRGFGHLPGS
Trigger: GGACCCTGGCAAGTGACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGTTAATGCCTGTAACACGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCATCTCAGTCTCAGTTTTaGGAGCAGAGTTTACATAGC +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSSQSQF*EQSLHS
Trigger: GCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGA...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGCCTATGGGTTTCCCTaGAACCCAACAAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEAYGFP*NPTKAE
Trigger: TTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGC...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATCATCAGTCATCACTCTaGCGAAGCGGCCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHHQSSL*RSGPCQ
Trigger: TTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATG...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTTCTGTTTTTGATAGTTaGACACTGGGGCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPSVFDS*TLGLPR
Trigger: CCGTGGCAGCCCCAGTGTGCAACTATCAAAAACAGA...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAATGTTGGATCATACTTaGAGGGACAAAGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSMLDHT*RDKEGP
Trigger: TGGTCCTTCTTTGTCCCTGCAAGTATGATCCAACAT...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCAAGTCCCAGAGGACTaGTCCATTGGGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHQVPED*SIGSRE
Trigger: TTCCCTACTCCCAATGGAGCAGTCCTCTGGGACTTG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTCTGAGGTGGGAGAATTaGTTGAATCCCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPLRWEN*LNPRGG
Trigger: TCCACCTCTGGGATTCAAGCAATTCTCCCACCTCAG...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAAAAGCGTATATGCTGTaGCCAGGTGGGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQKAYML*PGGWNS
Trigger: ACTGTTCCACCCACCTGGGCACAGCATATACGCTTT...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGAAAAGTCATCTTGTTaGAATTTGTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSEKSSC*NLWWWL
Trigger: CAGCCACCACCACAAATTCCAACAAGATGACTTTTC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAAAAATTAGCCAGGTGTaGTGGTGGGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQKISQV*WWAPVI
Trigger: GATTACAGGCGCCCACCACCACACCTGGCTAATTTT...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATATCAGGCAGGTCTCCTaGGGCGTCTGTACAACCCTT +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHIRQVS*GVCTTL
Trigger: AAGGGTTGTACAGACGCCTCAGGAGACCTGCCTGAT...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTAAACCACGCCATAGCTaGGGACATCTACCAATCACT +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPKPRHS*GHLPIT
Trigger: AGTGATTGGTAGATGTCCTCAGCTATGGCGTGGTTT...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACTGCCCGTTAAACTCTaGCATCAACTGATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSLPVKL*HQLIKR
Trigger: TCTTTTAATCAGTTGATGTCAGAGTTTAACGGGCAG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCAGTCATCACCTGTGGTaGCCGGAACTCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFSHHLW*PELGQL
Trigger: CAGCTGGCCGAGTTCCGGGCACCACAGGTGATGACT...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCCACCATGGACCAAATaGCACCATGACACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHPPWTK*HHDTED
Trigger: GTCTTCTGTGTCATGGTGGCATTTGGTCCATGGTGG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAAGAGCAACATGTCATTaGCTGGGCCTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRRATCH*LGLPAR
Trigger: CCTGGCTGGAAGGCCCAGGCAATGACATGTTGCTCT...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATAAGCGGCTGCTCTTCTaGCTTTCTGCTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHKRLLF*LSAARG
Trigger: ACCACGAGCAGCAGAAAGGCAGAAGAGCAGCCGCTT...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGAATCACGGCAGCTTTaGAGCATGGCCTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFESRQL*SMASPL
Trigger: CAGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCATCATCACTTTCTGAGTaGCCAAAATACTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSSSLSE*PKYSLS
Trigger: AGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGA...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTCACTGCCTCGGCTTTaGCCCGGTCCTCCTCTACTT +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHSLPRL*PGPPLL
Trigger: AAGTAGAGGAGGACCGGGCCAAAGCCGAGGCAGTGA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAGCCGTGGCCTGCCTCTaGCTACTTCCCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLAVACL*LLPSKV
Trigger: TACCTTGCTGGGAAGTAGCCAGAGGCAGGCCACGGC...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCATGGAATTTGTGGTGGTaGCTGCCTAGATTTGAAATT +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSWNLWW*LPRFEI
Trigger: AATTTCAAATCTAGGCAGCCACCACCACAAATTCCA...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCTTCTCGGACCAAGATaGGCCATGGGAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFLLGPR*AMGGAG
Trigger: TCCTGCCCCTCCCATGGCCCATCTTGGTCCGAGAAG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACTGCAAAGTTCAGGTTaGTTTTTAACTGTGACACAC +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSLQSSG*FLTVTH
Trigger: GTGTGTCACAGTTAAAAACCAACCTGAACTTTGCAG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATGTGCCTATTTTGTACTaGGTCCTCTGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHVPILY*VLCQVG
Trigger: CCCCACCTGGCAGAGGACCCAGTACAAAATAGGCAC...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTCAATGATCGCCTCGTaGTGCTGCAGGTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFSMIAS*CCRSRS
Trigger: GGAACGCGACCTGCAGCATCACGAGGCGATCATTGA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAAGCTGGGTCAGTTCTTaGTTCCTTGCTTCAATTGTC +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSWVSS*FLASIV
Trigger: GACAATTGAAGCAAGGAATCAAGAACTGACCCAGCT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGACCAAATGCCACCATaGCACAGAAGACATATTCTG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRDQMPP*HRRHIL
Trigger: CAGAATATGTCTTCTGTGTCATGGTGGCATTTGGTC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACACCCAGGAAGCCCAATaGTGTGCCAGCTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHTQEAQ*CASYSS
Trigger: ACTGCTGTAGCTGGCACATCATTGGGCTTCCTGGGT...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACAGGTGGGTGGAACAGTaGCCTGCAAAACCACGCCAT +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHRWVEQ*PAKPRH
Trigger: ATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACCT...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATTGCCGAAGCGGCCCCTaGCAATGCCGTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYCRSGP*QCRVPR
Trigger: CCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCA...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTACATCAGTCATCACTCTaGCGAAGCGGCCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLHQSSL*RSGPCQ
Trigger: TTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATG...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGAGCCTCTTATTCACTaGCTCGGCTTTGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFEPLIH*LGFGPV
Trigger: GACCGGGCCAAAGCCGAGGCAGTGAATAAGAGGCTC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCGGAACTCGGCCAGCTaGTTCCGGAGCCTCTTATTC +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFRNSAS*FRSLLF
Trigger: GAATAAGAGGCTCCGGAAGCAGCTGGCCGAGTTCCG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGTCAAACCATTAGAGTaGCCTGTGGTTCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRVKPLE*PVVLSV
Trigger: CACTGAAAGAACCACAGGGCACTCTAATGGTTTGAC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTCCAAGATTGCACCACTaGACTCCAGCCTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRPRLHH*TPALGT
Trigger: TGTCCCCAAGGCTGGAGTGCAGTGGTGCAATCTTGG...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCAGCGAGCCGAGATCATaGCACTGCACTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFSEPRS*HCTPAW
Trigger: CCATGCTGGAGTGCAGTGGCATGATCTCGGCTCGCT...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAAGCGAGCCGAGATCATaGCACTGCACTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLSEPRS*HCTPAW
Trigger: CCATGCTGGAGTGCAGTGGCATGATCTCGGCTCGCT...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCCAGGAGGAGGAGGTTaGAGCGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCGCTGCAACCTCCTCCTCCTGG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAGCAGACATAGTGAGGTaGACACAAGGGCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRADIVR*TQGPLH
Trigger: GTGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGC...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCATCACATTCTTTTTCTTaGTCTGGCTATACCACTACA +
Preference number: 4 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSSHSFS*SGYTTT
Trigger: TGTAGTGGTATAGCCAGAGCAAGAAAAAGAATGTGA...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAGAAGACTACAGCAAATaGATCACATCCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHREDYSK*ITSKAE
Trigger: CTCAGCCTTGGATGTGATCCATTTGCTGTAGTCTTC...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTTTCAGAATCTGCCTATaGGTTTCCCTGAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPFRICL*VSLKPN
Trigger: GTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAA...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCAGAGTTTACATAGCTaGGCTCCTCCACCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTQSLHS*APPPAR
Trigger: GCGGGCTGGTGGAGGAGCTCAGCTATGTAAACTCTG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCCAGAGTTTACATAGCTaGGCTCCTCCACCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LVQIEVYFHCLVKLAFVGQSLHS*APPPAR
Trigger: GCGGGCTGGTGGAGGAGCTCAGCTATGTAAACTCTG...GCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR TCA 90 bp CAGCAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTTCAATGATCGCCTCGTaGTGCTGCAGGTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: QQDLLVQIEVYFHCLVKLSMIAS*CCRSRS
Trigger: GGAACGCGACCTGCAGCATCACGAGGCGATCATTGA...AAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR TCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTTTTCAGCCTCCTCAATaGTCGCCTCGTGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRFQPPQ*SPRDAA
Trigger: TGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAA...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTGCTTTTGTAGGCATTaGGAACCTGCAGAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHCFCRH*EPAECF
Trigger: GAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGATCTCCTTGTCCAGATTaGGGTATATTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSPCPD*GIFPLP
Trigger: AGGCAATGGAAATATACCTCAATCTGGACAAGGAGA...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATGCTTACACTAAGGGTTaGAGCAAGGCAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHAYTKG*SKAEKG
Trigger: TCCCTTCTCTGCCTTGCTTCAACCCTTAGTGTAAGC...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGCGCTCCCTTGGGAGATaGGGTAGGGTAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLRSLGR*GRVAPE
Trigger: CTCTGGAGCTACCCTACCTCATCTCCCAAGGGAGCG...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTGTCAGGGCTTTTGCTaGATGTCAAGGGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHCQGFC*MSREKI
Trigger: GATCTTTTCCCTTGACATTCAGCAAAAGCCCTGACA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTATTTGGATCTACGCCTaGCTCGAAACTGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPIWIYA*LETVHN
Trigger: ATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAAT...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATCCCAGCAAGGTAATCTaGCTGCAACTGCTCATTGGT +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHPSKVI*LQLLIG
Trigger: ACCAATGAGCAGTTGCAGGCAGATTACCTTGCTGGG...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATGAGAAAAAGCGTATATaGTGTGCCCAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHEKKRI*CAQVGG
Trigger: TCCACCCACCTGGGCACAGCATATACGCTTTTTCTC...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCTCACTGCCTCGGCTTTaGCCCGGTCCTCCTCTACTT +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKASLPRL*PGPPLL
Trigger: AAGTAGAGGAGGACCGGGCCAAAGCCGAGGCAGTGA...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAATTCTGTACACCAAGGTaGAAGACTACAGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQFCTPR*KTTANG
Trigger: TCCATTTGCTGTAGTCTTCCACCTTGGTGTACAGAA...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCTGGTGTGGCTTCCTTaGAAAAGAGGAGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHLVWLP*KRGALL
Trigger: CAATAAAGCTCCTCTTTTCCAAGGAAGCCACACCAG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTCACATGTCTGGCCTTaGCCTGCTGAGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHSHVWP*PAERSP
Trigger: TGGTGATCTCTCAGCAGGCCAAGGCCAGACATGTGA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCCTTCCTCACATGTCTaGCCTTGGCCTGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSPSSHV*PWPAER
Trigger: TCTCTCAGCAGGCCAAGGCCAGACATGTGAGGAAGG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCCAGGGGCCAGGCTGTaGAAACACTCCCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYPGARL*KHSPWA
Trigger: TGCCCATGGGGAGTGTTTTCACAGCCTGGCCCCTGG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTACCCAGGAAGCCCAATaGTGTGCCAGCTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFTQEAQ*CASYSS
Trigger: ACTGCTGTAGCTGGCACATCATTGGGCTTCCTGGGT...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAACATGCCTTCATTTTTaGACAGAATTATGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVETCLHF*TELCLH
Trigger: GTGCAAGCATAATTCTGTTCAAAAATGAAGGCATGT...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACTGCCCGTTAAACTCTaGCATCAACTGATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRLPVKL*HQLIKR
Trigger: TCTTTTAATCAGTTGATGTCAGAGTTTAACGGGCAG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GTAATTTCTCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCACATCAGTCATCACTCTaGCGAAGCGGCCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VISPSYYPSGGSCPQCISHQSSL*RSGPCQ
Trigger: TTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATG...TGAAATACATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACTCACCTCTTCCTTCTaGCTCAATTGTAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRLTSSF*LNCKSI
Trigger: AATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTCCCAGCAAGGTAATCTaGCTGCAACTGCTCATTGGT +
Preference number: 4 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRPSKVI*LQLLIG
Trigger: ACCAATGAGCAGTTGCAGGCAGATTACCTTGCTGGG...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAATTGTATCCTATAATTTaGCCCATTTCCAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LNFGGETCPGLFLYTKVELYPII*PISSEN
Trigger: GTTCTCACTGGAAATGGGGCAAATTATAGGATACAA...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGCCAGGCACTGTGCTGTaGTCAGCACGTGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLPGTVL*SARVTG
Trigger: GCCTGTAACACGTGCTGAGCACAGCACAGTGCCTGG...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGGAGCTGTTCGCCTCTaGCTCTTGTGCTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSGAVRL*LLCFRS
Trigger: ACTTCTGAAGCACAAGAGGCAGAGGCGAACAGCTCC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp ATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCATTGAGAACAGCTCCGACCCTTCATaGGAGTCGGAGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: IEVYFHCLVKLAFVGIENSSDPS*ESERTL
Trigger: GAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCT...GTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAACCAGCTCAAGTTTTTaGTCGGCAGTCAGGCCTACC +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLTSSSF*SAVRPT
Trigger: GGTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGT...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTTCATCACTTTCTGAGTaGCCAAAATACTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPSSLSE*PKYSLS
Trigger: AGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGA...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTCCCTCTCCCAGGTGTaGGAAGGTCACTTTCACTAT +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHSLSQV*EGHFHY
Trigger: ATAGTGAAAGTGACCTTCCCACACCTGGGAGAGGGA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTATTCTGATTCTGAACTaGGCCATGTTGGATCATACT +
Preference number: 4 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPILILN*AMLDHT
Trigger: AGTATGATCCAACATGGCCCAGTTCAGAATCAGAAT...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGATTCTTTCTCCCACCATaGACCAAATGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRFFLPP*TKCHHD
Trigger: GTCATGGTGGCATTTGGTCCATGGTGGGAGAAAGAA...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTGTTGGAATTTGTGGTaGTGGCTGCCTAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHCWNLW*WLPRFE
Trigger: TTCAAATCTAGGCAGCCACCACCACAAATTCCAACA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTCTTGTTGGAATTTGTaGTGGTGGCTGCCTAGATTT +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHSCWNL*WWLPRF
Trigger: AAATCTAGGCAGCCACCACCACAAATTCCAACAAGA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCTCGAGAGGCTGAGGTaGGAGAATTGCTTGAATCCC +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFLERLR*ENCLNP
Trigger: GGGATTCAAGCAATTCTCCCACCTCAGCCTCTCGAG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTACTCGAGAGGCTGAGGTaGGAGAATTGCTTGAATCCC +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLLERLR*ENCLNP
Trigger: GGGATTCAAGCAATTCTCCCACCTCAGCCTCTCGAG...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACTGCAAAGTTCAGGTTaGTTTTTAACTGTGACACAC +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRLQSSG*FLTVTH
Trigger: GTGTGTCACAGTTAAAAACCAACCTGAACTTTGCAG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCTTTCAGCCTCCTCAATaGTCGCCTCGTGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVQIEVYFHCLVKLAFVGFQPPQ*SPRDAA
Trigger: TGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAA...GCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCTTTCACTATGCTTGTaGACTAAATGCTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHLSLCL*TKCWLT
Trigger: TGTTAGCCAGCATTTAGTTCACAAGCATAGTGAAAG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAACAACCCTTATACTATaGCTATTACGGTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRTTLIL*LLRWGG
Trigger: ACCTCCCCACCGTAATAGTCATAGTATAAGGGTTGT...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTGGTGGGAGAATTGCTTaGATCCCAGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTGGRIA*IPEVEV
Trigger: AACCTCCACCTCTGGGATTCAAGCAATTCTCCCACC...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTGGTGGGAGAATTGCTTaGATCCCAGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFGGRIA*IPEVEV
Trigger: AACCTCCACCTCTGGGATTCAAGCAATTCTCCCACC...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAACATGCCTTCATTTTTaGACAGAATTATGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRTCLHF*TELCLH
Trigger: GTGCAAGCATAATTCTGTTCAAAAATGAAGGCATGT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTGGTGTAACATCTATTaGGTGCCTATTTTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHWCNIY*VPILYW
Trigger: CCAGTACAAAATAGGCACTCAATAGATGTTACACCA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GTAATTTCTCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCATTTCAGCCTCCTCAATaGTCGCCTGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VISPSYYPSGGSCPQCISFQPPQ*SPELLH
Trigger: GTGGAGGAGCTCAGGCGATCATTGAGGAGGCTGAAA...TGAAATACATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR GCA 90 bp ATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCATTGAGAACCATCAGTCATCACTCTaGCGAAGCGGCCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: IEVYFHCLVKLAFVGIENHQSSL*RSGPCQ
Trigger: TTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATG...GTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCACTGAGAATGCTGAGTaGCAGGCATTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSTENAE*QAFTML
Trigger: CAGCATGGTGAATGCCTGGCACTCAGCATTCTCAGT...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATTTTCCTGTTGTTAATTaGGGCCCCATTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHFPVVN*GPIPCL
Trigger: GAGACATGGAATGGGGCCGCAATTAACAACAGGAAA...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGAAGCGGCTGCTCTTCTaGCTTTCTGCTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLKRLLF*LSAARG
Trigger: ACCACGAGCAGCAGAAAGGCAGAAGAGCAGCCGCTT...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCTGAGGTGGGAGAATTaGTTGAATCCCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSLRWEN*LNPRGG
Trigger: TCCACCTCTGGGATTCAAGCAATTCTCCCACCTCAG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTTGAAAAGTCAGGAGTaGCACACTAAAGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHLKSQE*HTKAPP
Trigger: AGGGGGTGCTTTAGTGTGGCACTCCTGACTTTTCAA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGATCACATTCTTTTTCTTaGTCTGGCTATACCACTACA +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSHSFS*SGYTTT
Trigger: TGTAGTGGTATAGCCAGAGCAAGAAAAAGAATGTGA...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGTAACATCTATTGAGTaGCTATTTTGTACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHVTSIE*LFCTGS
Trigger: GGACCCAGTACAAAATAGGCACTCAATAGATGTTAC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCACCAGCTCAAGTTTTTaGTCGGCAGTCAGGCCTACC +
Preference number: 4 (lower is better)
Translates to: LVQIEVYFHCLVKLAFVGTSSSF*SAVRPT
Trigger: GGTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGT...GCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTCCCTCTCCCAGGTGTaGGAAGGTCACTTTCACTAT +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFSLSQV*EGHFHY
Trigger: ATAGTGAAAGTGACCTTCCCACACCTGGGAGAGGGA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCCGAAGAAATCATCTTaGTTTCCTTCGTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHPKKSS*FPSCLF
Trigger: AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTTCTTTCTCCCACCATaGACCAAATGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHFFLPP*TKCHHD
Trigger: GTCATGGTGGCATTTGGTCCATGGTGGGAGAAAGAA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCCCAGGTGGCAGGAAGTaGCTTACACTAAGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSPGGRK*LTLRVE
Trigger: TTCAACCCTTAGTGTAAGCCACTTCCTGCCACCTGG...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCCTTTCTGCTGCTCGTaGTTCAGTCTGTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHPFCCS*FSLFRL
Trigger: CAATCTGAACAGACTGAACCACGAGCAGCAGAAAGG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATATCTCTGTTCTGGTGTaGCTTCCTTGGAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHISVLV*LPWKRG
Trigger: TCCTCTTTTCCAAGGAAGCCACACCAGAACAGAGAT...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp GTGGGGGAAGGTAGGATTTTTGCAGGTCAGAACAGGTaGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGEGRIFAGQNR*YQPEEIILVSF
Trigger: GAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCAAAAATCCTACCTTCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp CCCACTGGTCTTCATCTCTGTTCTGGTGTGGCTTCCTaGGAAAAGAGGAGCTTTATTGAAAGAGAATACCCC +
Preference number: 4 (lower is better)
Translates to: PTGLHLCSGVAS*EKRSFIEREYP
Trigger: GGGGTATTCTCTTTCAATAAAGCTCCTCTTTTCCAAGGAAGCCACACCAGAACAGAGATGAAGACCAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATTCTCAGTCTCAGTTTTaGGAGCAGAGTTTACATAGC +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHSQSQF*EQSLHS
Trigger: GCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGA...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACGACCAAATGCCACCATaGCACAGAAGACATATTCTG +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHDQMPP*HRRHIL
Trigger: CAGAATATGTCTTCTGTGTCATGGTGGCATTTGGTC...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTACTGAGAATGCTGAGTaGCAGGCATTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTTENAE*QAFTML
Trigger: CAGCATGGTGAATGCCTGGCACTCAGCATTCTCAGT...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATATGTTGGATCATACTTaGAGGGACAAAGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHMLDHT*RDKEGP
Trigger: TGGTCCTTCTTTGTCCCTGCAAGTATGATCCAACAT...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCGGAAGCCCAATGATGTaGCAGCTACAGCAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAGSPMM*QLQQFD
Trigger: ATCGAACTGCTGTAGCTGGCACATCATTGGGCTTCC...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCTTCTGCCTTTCTGCTaGTCGTGGTTCAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKALLPFC*SWFSLF
Trigger: GAACAGACTGAACCACGAGCAGCAGAAAGGCAGAAG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCTTCTGCCTTTCTGCTaGTCGTGGTTCAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTLLPFC*SWFSLF
Trigger: GAACAGACTGAACCACGAGCAGCAGAAAGGCAGAAG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGAACAGAATTATGCTTaGACACCATTTAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHEQNYA*TPFNGD
Trigger: GTCACCATTAAATGGTGTGCAAGCATAATTCTGTTC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGACAAAACATGAAGGACTaGCTCTCATTAAGAAATATG +
Preference number: 4 (lower is better)
Translates to: KVRSATLKHPLPSKERHRQNMKD*LSLRNM
Trigger: CATATTTCTTAATGAGAGGCAGTCCTTCATGTTTTG...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATGTAAGTCATCACCTGTaGTGCCCGGAACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYVSHHL*CPELGQ
Trigger: CTGGCCGAGTTCCGGGCACCACAGGTGATGACTTAC...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCAACATGTCATTGCCTaGGCCTTCCAGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYQHVIA*AFQPGR
Trigger: CCTGCCTGGCTGGAAGGCCCAGGCAATGACATGTTG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCAAAATTAGCCAGGTGTaGTGGTGGGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAKISQV*WWAPVI
Trigger: GATTACAGGCGCCCACCACCACACCTGGCTAATTTT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACATCTCTGTTCTGGTGTaGCTTCCTTGGAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHISVLV*LPWKRG
Trigger: TCCTCTTTTCCAAGGAAGCCACACCAGAACAGAGAT...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp TATTCTGATTCTGAACTGGGCCATGTTGGATCATACTaGCAGGGACAAAGAAGGACCATCACGCATTCACGA +
Preference number: 4 (lower is better)
Translates to: YSDSELGHVGSY*QGQRRTITHSR
Trigger: TCGTGAATGCGTGATGGTCCTTCTTTGTCCCTGCAAGTATGATCCAACATGGCCCAGTTCAGAATCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGATATTTCATCACTTTCTaGGTGGCCAAAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRYFITF*VAKILP
Trigger: AGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATA...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCAGCTGGGTCAGTTCTTaGTTCCTTGCTTCAATTGTC +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSSWVSS*FLASIV
Trigger: GACAATTGAAGCAAGGAATCAAGAACTGACCCAGCT...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCTGCTTTTGTAGGCATTaGGAACCTGCAGAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSCFCRH*EPAECF
Trigger: GAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCA...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACTTTCACTATGCTTGTaGACTAAATGCTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRLSLCL*TKCWLT
Trigger: TGTTAGCCAGCATTTAGTTCACAAGCATAGTGAAAG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCAAACCACGCCATAGCTaGGGACATCTACCAATCACT +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAKPRHS*GHLPIT
Trigger: AGTGATTGGTAGATGTCCTCAGCTATGGCGTGGTTT...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTATGTCTCAGTCCAAACTaGGAGAGCAACATGTCATTG +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLCLSPN*ESNMSL
Trigger: CAATGACATGTTGCTCTCGCAGTTTGGACTGAGACA...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCTTTCCTGTTGTTAATTaGGGCCCCATTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSFPVVN*GPIPCL
Trigger: GAGACATGGAATGGGGCCGCAATTAACAACAGGAAA...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTTACCTGTCCGGGATTTaGATCTACGCCTGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: DSLLQLSQEIERSLSSTAYLSGI*IYACLE
Trigger: TTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTA...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATTCTGATTCTGAACTaGGCCATGTTGGATCATACT +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRILILN*AMLDHT
Trigger: AGTATGATCCAACATGGCCCAGTTCAGAATCAGAAT...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTTCCTCACTCCACCACTaGGAAAAGTTGATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRSSLHH*EKLISF
Trigger: GAAAGAAATCAACTTTTCCCAGTGGTGGAGTGAGGA...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACTCCTCACTCCACCACTaGGAAAAGTTGATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHSSLHH*EKLISF
Trigger: GAAAGAAATCAACTTTTCCCAGTGGTGGAGTGAGGA...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGAAGACTACAGCAAATaGATCACATCCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSEDYSK*ITSKAE
Trigger: CTCAGCCTTGGATGTGATCCATTTGCTGTAGTCTTC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTTCTTGTTGGAATTTGTaGTGGTGGCTGCCTAGATTT +
Preference number: 4 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRSCWNL*WWLPRF
Trigger: AAATCTAGGCAGCCACCACCACAAATTCCAACAAGA...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGACTGTGTTCCCACCTTaGCTCAGAGAGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLTVFPP*LREDLV
Trigger: GACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGT...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp AGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTaGCAGCAGTATCTAGTCCAGGAGCTACCCCACCAA +
Preference number: 4 (lower is better)
Translates to: RNHLGFLRACFL*QQYLVQELPHQ
Trigger: TTGGTGGGGTAGCTCCTGGACTAGATACTGCTGCAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp ATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTaGTTTTCTTTTGCAGCAGTATCTAGTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ISPKKSSWFPSC*FSFAAVSSPGA
Trigger: AGCTCCTGGACTAGATACTGCTGCAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp GGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTaGGTTTCCTTCGTGCTTGTTTTCTTTTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GQNRLYQPEEII*VSFVLVFFCSS
Trigger: ACTGCTGCAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTACAACCCTTATACTATaGCTATTACGGTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTTTLIL*LLRWGG
Trigger: ACCTCCCCACCGTAATAGTCATAGTATAAGGGTTGT...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTTCTTCACCAGTCAATTaGAAAGTCAGGAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTSSPVN*KVRSAT
Trigger: TGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGA...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCTGTCAGGGCTTTTGCTaGATGTCAAGGGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKACQGFC*MSREKI
Trigger: GATCTTTTCCCTTGACATTCAGCAAAAGCCCTGACA...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCTCACCTCTTCCTTCTaGCTCAATTGTAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHLTSSF*LNCKSI
Trigger: AATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCGCCAGGCATTCACCATaGTGTTTTGATGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSARHSP*CFDVCF
Trigger: AAAACAGACATCAAAACAGCATGGTGAATGCCTGGC...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGATTGTATCCTATAATTTaGCCCATTTCCAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRLYPII*PISSEN
Trigger: GTTCTCACTGGAAATGGGGCAAATTATAGGATACAA...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTATTCCAAGCCTTACGATaGCCTTTTAAGGACATCTCT +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLFQALR*PFKDIS
Trigger: AGAGATGTCCTTAAAAGGCCATCGTAAGGCTTGGAA...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCAGCAGTTCGATCTGTaGGTTCTGAGAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYQQFDL*VLRGVL
Trigger: CAGGACTCCTCTCAGAACCCACAGATCGAACTGCTG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAGAAAAGTCATCTTGTTaGAATTTGTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLEKSSC*NLWWWL
Trigger: CAGCCACCACCACAAATTCCAACAAGATGACTTTTC...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGCCTTTCTGCTGCTCGTaGTTCAGTCTGTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLPFCCS*FSLFRL
Trigger: CAATCTGAACAGACTGAACCACGAGCAGCAGAAAGG...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCTGGTGTGGCTTCCTTaGAAAAGAGGAGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTLVWLP*KRGALL
Trigger: CAATAAAGCTCCTCTTTTCCAAGGAAGCCACACCAG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCAGAGAAGGGAAAATGTaGGCATTTCAGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFREGKM*AFQDKT
Trigger: TGTTTTGTCCTGAAATGCTCACATTTTCCCTTCTCT...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCATTTGGATCTACGCCTaGCTCGAAACTGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: LVQIEVYFHCLVKLAFVGIWIYA*LETVHN
Trigger: ATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAAT...GCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR GCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATTCTGTTTTTGATAGTTaGACACTGGGGCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYSVFDS*TLGLPR
Trigger: CCGTGGCAGCCCCAGTGTGCAACTATCAAAAACAGA...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGTGTCTCAGTCCAAACTaGGAGAGCAACATGTCATTG +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLCLSPN*ESNMSL
Trigger: CAATGACATGTTGCTCTCGCAGTTTGGACTGAGACA...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACGAACAGAATTATGCTTaGACACCATTTAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHEQNYA*TPFNGD
Trigger: GTCACCATTAAATGGTGTGCAAGCATAATTCTGTTC...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTTCCAAGCCTTACGATaGCCTTTTAAGGACATCTCT +
Preference number: 4 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFFQALR*PFKDIS
Trigger: AGAGATGTCCTTAAAAGGCCATCGTAAGGCTTGGAA...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTTGTTGGAATTTGTGGTaGTGGCTGCCTAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTCWNLW*WLPRFE
Trigger: TTCAAATCTAGGCAGCCACCACCACAAATTCCAACA...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp CAGATGACAGCTTTAGCTGGGTCAGTTCTTGATTCCTaGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: QMTALAGSVLDS*LQLSQEIERSL
Trigger: TAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
CDS-3UTR TCA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTATTTCATCACTTTCTaGGTGGCCAAAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFYFITF*VAKILP
Trigger: AGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATA...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CAGCAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTTATTTCATCACTTTCTaGGTGGCCAAAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: QQDLLVQIEVYFHCLVKLYFITF*VAKILP
Trigger: AGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATA...AAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR TCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTAATTGTCTCAAGAAATTaGGCGTTCTCTATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLIVSRN*AFSIFN
Trigger: GTTGAAGATAGAGAACGCTCAATTTCTTGAGACAAT...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCATTGTCTCAAGAAATTaGGCGTTCTCTATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFIVSRN*AFSIFN
Trigger: GTTGAAGATAGAGAACGCTCAATTTCTTGAGACAAT...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTAGCTGGGTCAGTTCTTaGTTCCTTGCTTCAATTGTC +
Preference number: 4 (lower is better)
Translates to: DSLLQLSQEIERSLSSTASWVSS*FLASIV
Trigger: GACAATTGAAGCAAGGAATCAAGAACTGACCCAGCT...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
CDS-3UTR TCA 90 bp ATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCATTGAGAACAGCTGGGTCAGTTCTTaGTTCCTTGCTTCAATTGTC +
Preference number: 4 (lower is better)
Translates to: IEVYFHCLVKLAFVGIENSWVSS*FLASIV
Trigger: GACAATTGAAGCAAGGAATCAAGAACTGACCCAGCT...GTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR TCA 90 bp ATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCATTGAGAACTGCTTTTGTAGGCATTaGGAACCTGCAGAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: IEVYFHCLVKLAFVGIENCFCRH*EPAECF
Trigger: GAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCA...GTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR TCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGTCTCCTTGTCCAGATTaGGGTATATTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLSPCPD*GIFPLP
Trigger: AGGCAATGGAAATATACCTCAATCTGGACAAGGAGA...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGAAAGAGGAGCTTTATTaGAAGAGAATACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLKEELY*KRIPHW
Trigger: CCAGTGGGGTATTCTCTTTCAATAAAGCTCCTCTTT...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTTGGTGTAACATCTATTaGGTGCCTATTTTGTACTGG +
Preference number: 4 (lower is better)
Translates to: LFLALAIPLQLRQTANRTWCNIY*VPILYW
Trigger: CCAGTACAAAATAGGCACTCAATAGATGTTACACCA...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TTCTCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCATCACTCTCACCTCTTCCTTCTaGCTCAATTGTAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: FSFILSLRRFMSSMYFITLTSSF*LNCKSI
Trigger: AATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG...AGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR GCA 90 bp CTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCCTCACCTCTTCCTTCTaGCTCAATTGTAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: LVQIEVYFHCLVKLAFVGLTSSF*LNCKSI
Trigger: AATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG...GCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR GCA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGAGGTATATTTCCATTaGCTTGTGAAGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFEVYFH*LVKLAF
Trigger: AAAAGCAAGCTTCACAAGGCAATGGAAATATACCTC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGGCCAGGCATTCACCATaGTGTTTTGATGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLARHSP*CFDVCF
Trigger: AAAACAGACATCAAAACAGCATGGTGAATGCCTGGC...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCCTGCAACTGCTCATTaGTTATTTTCATTCGATTCC +
Preference number: 4 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAPATAH*LFSFDS
Trigger: GGAATCGAATGAAAATAACCAATGAGCAGTTGCAGG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGTTCTGTACACCAAGGTaGAAGACTACAGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLFCTPR*KTTANG
Trigger: TCCATTTGCTGTAGTCTTCCACCTTGGTGTACAGAA...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR TCA 90 bp TTCTCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCATCACTATTGTCTCAAGAAATTaGGCGTTCTCTATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: FSFILSLRRFMSSMYFITIVSRN*AFSIFN
Trigger: GTTGAAGATAGAGAACGCTCAATTTCTTGAGACAAT...AGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR TCA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTTCTCCTTGTCCAGATTaGGGTATATTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: DSLLQLSQEIERSLSSTASPCPD*GIFPLP
Trigger: AGGCAATGGAAATATACCTCAATCTGGACAAGGAGA...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR TCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATTCTTCACCAGTCAATTaGAAAGTCAGGAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYSSPVN*KVRSAT
Trigger: TGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGA...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp CAGCAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGAGGTATATTTCCATTaGCTTGTGAAGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QQDLLVQIEVYFHCLVKLEVYFH*LVKLAF
Trigger: AAAAGCAAGCTTCACAAGGCAATGGAAATATACCTC...AAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR GCA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTATTTGTGGTGGTGGCTaGCTAGATTTGAAATTGTAT +
Preference number: 4 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFICGGG*LDLKLY
Trigger: ATACAATTTCAAATCTAGGCAGCCACCACCACAAAT...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGGTGATACCTACTAGTTaGCTTGTTGCTTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLVIPTS*LVAFPI
Trigger: AATGGGAAAAGCAACAAGGCAACTAGTAGGTATCAC...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR GCA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTACAAAACATGAAGGACTaGCTCTCATTAAGAAATATG +
Preference number: 4 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLQNMKD*LSLRNM
Trigger: CATATTTCTTAATGAGAGGCAGTCCTTCATGTTTTG...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp TTTTTCAAACGTAATTTCTCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCATCATCACTTTCTGAGTaGCCAAAATACTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FFKRNFSFILSLRRFMSSSSLSE*PKYSLS
Trigger: AGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGA...TGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR CCA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGCCGAAGAAATCATCTTaGTTTCCTTCGTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VVSARRNHLGFLRACFLLPKKSS*FPSCLF
Trigger: AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGG...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
3UTR CAA 72 bp GCTTTAGCTGGGTCAGTTCTTGATTCCTTGCTTCAATaGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACT +
Preference number: 4 (lower is better)
Translates to: ALAGSVLDSLLQ*SQEIERSLSST
Trigger: AGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
CDS-3UTR TCA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTTATTTCATCACTTTCTaGGTGGCCAAAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: DSLLQLSQEIERSLSSTAYFITF*VAKILP
Trigger: AGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATA...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
CDS-3UTR CCA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTTCATCACTTTCTGAGTaGCCAAAATACTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: DSLLQLSQEIERSLSSTASSLSE*PKYSLS
Trigger: AGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGA...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
CDS-3UTR TCA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTATTGTCTCAAGAAATTaGGCGTTCTCTATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: DSLLQLSQEIERSLSSTAIVSRN*AFSIFN
Trigger: GTTGAAGATAGAGAACGCTCAATTTCTTGAGACAAT...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561517.5
ENST00000616795.1
CDS-3UTR GCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATGTGATACCTACTAGTTaGCTTGTTGCTTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYVIPTS*LVAFPI
Trigger: AATGGGAAAAGCAACAAGGCAACTAGTAGGTATCAC...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CCA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCCTGCAACTGCTCATTaGTTATTTTCATTCGATTCC +
Preference number: 4 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYPATAH*LFSFDS
Trigger: GGAATCGAATGAAAATAACCAATGAGCAGTTGCAGG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS GCA 90 bp ATCATCAGTCATCACTCTGCCGAAGCGGCCCCTGCCAATGCCGTGTaGCCAGGAGCTCCGGGTGCCGGCGGCCACGCGTCACTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: IISHHSAEAAPANAV*PGAPGAGGHASLRL
Trigger: CAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS GCA 90 bp CGCTCTCGGACTCATCATCAGTCATCACTCTGCCGAAGCGGCCCCTaGCAATGCCGTGTGCCCAGGAGCTCCGGGTGCCGGCGGCCACGC +
Preference number: 5 (lower is better)
Translates to: RSRTHHQSSLCRSGP*QCRVPRSSGCRRPR
Trigger: GCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGATGAGTCCGAGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS GCA 90 bp CGGACTCATCATCAGTCATCACTCTGCCGAAGCGGCCCCTGCCAATaGCGTGTGCCCAGGAGCTCCGGGTGCCGGCGGCCACGCGTCACT +
Preference number: 5 (lower is better)
Translates to: RTHHQSSLCRSGPCQ*RVPRSSGCRRPRVT
Trigger: AGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGATGAGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS CCA 90 bp AGGCGCGGGCGGCGGTACCTGAGCTCCTCCACCAGCCCGCACAGCTaGATAACAGGCAGCTCCAGCTCCGACCCTTCATGGGAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: RRGRRYLSSSTSPHS*ITGSSSSDPSWESE
Trigger: CTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAGGTACCGCCGCCCGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566498.1
CDS GCA 90 bp GGGAGTCGGAGAGGACGCTCTCGGACTCATCATCAGTCATCACTCTaGCGAAGCGGCCCCTGCCAATGCCGTGTGCCCAGGAGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GSRRGRSRTHHQSSL*RSGPCQCRVPRSSG
Trigger: CCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219299.8
ENST00000443128.6
ENST00000561517.5
CDS CCA 90 bp AGCCTCCTCAATGATCGCCTGAGCTCCTCCACCAGCCCGCACAGCTaGATAACAGGCAGCTCCAGCTCCGACCCTTCATGGGAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SLLNDRLSSSTSPHS*ITGSSSSDPSWESE
Trigger: CTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAGGCGATCATTGAGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACAGGCTGGTAAGCAGTaGCCAGGTGGCAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSQAGKQ*PGGRKW
Trigger: CCACTTCCTGCCACCTGGCAACTGCTTACCAGCCTG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS TCA 90 bp GGATCGGCTAAGCACACCGTCTGGCATGAGAGAGACTCCTCCGGCTaGAACCCTCACTTCCCCAATTACCCTCTGGGCTTCTCACCACCG +
Preference number: 5 (lower is better)
Translates to: GSAKHTVWHERDSSG*NPHFPNYPLGFSPP
Trigger: CGGTGGTGAGAAGCCCAGAGGGTAATTGGGGAAGTGAGGGTTTCAGCCGGAGGAGTCTCTCTCATGCCAGACGGTGTGCTTAGCCGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566498.1
CDS-3UTR CAA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGTTCCGCATTTGCCCTaGTGTGTCGTAAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEVPHLP*CVVSHP
Trigger: AGGATGACTTACGACACACAAGGGCAAATGCGGAAC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR CAA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAACCCAGGAGGAGGAGGTaGCAGCGAGCCGAGATCATG +
Preference number: 5 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEPRRRR*QRAEIM
Trigger: CATGATCTCGGCTCGCTGCAACCTCCTCCTCCTGGG...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGTTCGCCTCTGCCTCTaGTGCTTCAGAAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSVRLCL*CFRSRS
Trigger: GCTGCGACTTCTGAAGCACAAGAGGCAGAGGCGAAC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAATACCTGTCCGGGATTaGGATCTACGCCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSIPVRD*DLRLPR
Trigger: TCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTAT...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR CAA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAGGAATCACGGCAGCTTaGCAGCATGGCCTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQGITAA*QHGLPA
Trigger: AGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCC...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS CCA 90 bp GGTCGGCAGTCAGGCCTACCCCACGGTCCATACCTGTCCGGGATTTaGATCTACGCCTGCCTCGAAACTGTGCATAATCTGCTGCTGATA +
Preference number: 5 (lower is better)
Translates to: GRQSGLPHGPYLSGI*IYACLETVHNLLLI
Trigger: TATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGGCCTGACTGCCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219299.8
ENST00000569374.1
ENST00000616795.1
CDS-3UTR CAA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGTCCGCAACCTCTTTTaGTACCAGCTCAAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEVRNLF*YQLKFL
Trigger: CAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGAC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACTGAACTGGGCCATGTaGGATCATACTTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSLNWAM*DHTCRD
Trigger: GTCCCTGCAAGTATGATCCAACATGGCCCAGTTCAG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAAGGCCTGCCCACGGAGTaGCTCCCATGTTTTCCCACT +
Preference number: 5 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQGLPTE*LPCFPT
Trigger: AGTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCC...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACCAGGCTGGTAAGCAGTaGCCAGGTGGCAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHQAGKQ*PGGRKW
Trigger: CCACTTCCTGCCACCTGGCAACTGCTTACCAGCCTG...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAATACCAGCTCAAGTTTTaGGTCGGCAGTCAGGCCTAC +
Preference number: 5 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEYQLKF*VGSQAY
Trigger: GTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGTA...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR CAA 90 bp CTGGCTAGCCTGGGGATGACCACCCCCTTCTCGGACCAAGATGGGCCATGGGAGGATTCCTTGCTTCAATaGTCTCAAGAAATTGAGCGT +
Preference number: 5 (lower is better)
Translates to: LASLGMTTPFSDQDGPWEDSLLQ*SQEIER
Trigger: ACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC...CTCCCATGGCCCATCTTGGTCCGAGAAGGGGGTGGTCATCCCCAGGCTAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCATCATCTTGTTGGAATTaGTGGTGGTGGCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSSSCWN*WWWLPR
Trigger: TCTAGGCAGCCACCACCACAAATTCCAACAAGATGA...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACCCAGGAGGAGGAGGTaGCAGCGAGCCGAGATCATG +
Preference number: 5 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRPRRRR*QRAEIM
Trigger: CATGATCTCGGCTCGCTGCAACCTCCTCCTCCTGGG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCACCACTGTCAGGGCTTTaGCTGAATGTCAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSPLSGL*LNVKGK
Trigger: TTTTCCCTTGACATTCAGCAAAAGCCCTGACAGTGG...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCCTAATCCCAGCACTTaGAGAGGGCGAGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHPNPST*RGRGGQ
Trigger: CTGCCCGCCTCGCCCTCTCAAAGTGCTGGGATTAGG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTTTCACTGCCTCGGCTTaGGCCCGGTCCTCCTCTACT +
Preference number: 5 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRFTASA*ARSSST
Trigger: AGTAGAGGAGGACCGGGCCAAAGCCGAGGCAGTGAA...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GGGAGCCCCCATGACCTAGGCAGACATAGTGAGGTGCACACAAGGGCCTCTTCAGCCTGCAACTGCTCATaGGTTATTTTCATTCGATTC +
Preference number: 5 (lower is better)
Translates to: GSPHDLGRHSEVHTRASSACNCS*VIFIRF
Trigger: GAATCGAATGAAAATAACCAATGAGCAGTTGCAGGC...TGAAGAGGCCCTTGTGTGCACCTCACTATGTCTGCCTAGGTCATGGGGGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCCTAATCCCAGCACTTaGAGAGGGCGAGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFPNPST*RGRGGQ
Trigger: CTGCCCGCCTCGCCCTCTCAAAGTGCTGGGATTAGG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGGAATCACGGCAGCTTaGCAGCATGGCCTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFGITAA*QHGLPA
Trigger: AGCGGGGAGGCCATGCTGCAAAGCTGCCGTGATTCC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTTCACTGCCTCGGCTTaGGCCCGGTCCTCCTCTACT +
Preference number: 5 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFFTASA*ARSSST
Trigger: AGTAGAGGAGGACCGGGCCAAAGCCGAGGCAGTGAA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACAACTGTGTTCCCACCTaGGCTCAGAGAGGATTTGGT +
Preference number: 5 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHNCVPT*AQRGFG
Trigger: ACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGTT...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATGCTGAGGTGGGAGAATaGCTTGAATCCCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHAEVGE*LESQRW
Trigger: CCACCTCTGGGATTCAAGCAATTCTCCCACCTCAGC...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAATCTGGTGTGGCTTCCTaGGAAAAGAGGAGCTTTATT +
Preference number: 5 (lower is better)
Translates to: LNFGGETCPGLFLYTKVESGVAS*EKRSFI
Trigger: AATAAAGCTCCTCTTTTCCAAGGAAGCCACACCAGA...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTCCCGAAGAAATCATCTaGGTTTCCTTCGTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPPEEII*VSFVLV
Trigger: AACAAGCACGAAGGAAACCAAGATGATTTCTTCGGG...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACGGGAAGGTAGGATTTTaGCAGGTCAGAACAGGTTGT +
Preference number: 5 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHGKVGF*QVRTGC
Trigger: ACAACCTGTTCTGACCTGCAAAAATCCTACCTTCCC...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGACTGAACTGGGCCATGTaGGATCATACTTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRLNWAM*DHTCRD
Trigger: GTCCCTGCAAGTATGATCCAACATGGCCCAGTTCAG...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp TGCGGCCCCATTCCATGTCTCAGTCCAAACTGCGAGAGCAACATGTCATTGCCTTCAGATTGTTTCCTGTaGTTAATTGCGGCCCCATTC +
Preference number: 5 (lower is better)
Translates to: CGPIPCLSPNCESNMSLPSDCFL*LIAAPF
Trigger: GAATGGGGCCGCAATTAACAACAGGAAACAATCTGA...AGGCAATGACATGTTGCTCTCGCAGTTTGGACTGAGACATGGAATGGGGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTGGCCTGCCCACGGAGTaGCTCCCATGTTTTCCCACT +
Preference number: 5 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFGLPTE*LPCFPT
Trigger: AGTGGGAAAACATGGGAGCAACTCCGTGGGCAGGCC...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GGTGGGTGGAACAGTGACCTGCAAAACCACGCCATAGCTGAGGACATCTACCAACTCAGCAAGATCTCCTaGTCCAGATTGAGGTATATT +
Preference number: 5 (lower is better)
Translates to: GGWNSDLQNHAIAEDIYQLSKIS*SRLRYI
Trigger: AATATACCTCAATCTGGACAAGGAGATCTTGCTGAG...TTGGTAGATGTCCTCAGCTATGGCGTGGTTTTGCAGGTCACTGTTCCACCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGATGGTTTCCTTCGTGCTaGTTTTCTTTTGCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: KVRSATLKHPLPSKERHRWFPSC*FSFAAV
Trigger: TACTGCTGCAAAAGAAAACAAGCACGAAGGAAACCA...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTGAACTTCGGTGGTGAGACGTGCCCTGGCCTGTTTCTGTACACCAAGGTGGAAGTAGCTAATATTCTATaGAGTGTTTGCTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LNFGGETCPGLFLYTKVEVANIL*SVCCVP
Trigger: TGGCACACAGCAAACACTCAATAGAATATTAGCTAC...TTCCACCTTGGTGTACAGAAACAGGCCAGGGCACGTCTCACCACCGAAGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTGTTCGCCTCTGCCTCTaGTGCTTCAGAAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: LFLALAIPLQLRQTANRTVRLCL*CFRSRS
Trigger: GCTGCGACTTCTGAAGCACAAGAGGCAGAGGCGAAC...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCATACCTGTCCGGGATTaGGATCTACGCCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: LVQIEVYFHCLVKLAFVGIPVRD*DLRLPR
Trigger: TCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTAT...GCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTGCTGAGGTGGGAGAATaGCTTGAATCCCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFAEVGE*LESQRW
Trigger: CCACCTCTGGGATTCAAGCAATTCTCCCACCTCAGC...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CCACCACTGGGAAAAGTTGATTTCTTTCTCCCACCATGGACCAAATGCCACCATCTCTTCACCAGTCAATaGAAAAGTCAGGAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: PPLGKVDFFLPPWTKCHHLFTSQ*KSQECH
Trigger: GTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAG...ATGGTGGCATTTGGTCCATGGTGGGAGAAAGAAATCAACTTTTCCCAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS CCA 90 bp CCTCTGGCTACTTCCCAGCAAGGTAATCTGCCTGCAACTGCTCATTaGTTATTTTCATTCGATTCCAAGCCTTACGATGGCCTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: PLATSQQGNLPATAH*LFSFDSKPYDGLLR
Trigger: CCTTAAAAGGCCATCGTAAGGCTTGGAATCGAATGAAAATAACCAATGAGCAGTTGCAGGCAGATTACCTTGCTGGGAAGTAGCCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGATCAGTTCTTGATTCCTaGCTTCAATTGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: KVRSATLKHPLPSKERHRSVLDS*LQLSQE
Trigger: TTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGA...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACGGGAAGGTAGGATTTTaGCAGGTCAGAACAGGTTGT +
Preference number: 5 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHGKVGF*QVRTGC
Trigger: ACAACCTGTTCTGACCTGCAAAAATCCTACCTTCCC...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AAAGTCAGGAGTGCCACACTAAAGCACCCCCTTCCATCCAAGGAGAGGCACAGAATAGAATCCTCTGTCTaGGAAATATGTTCTCATGTC +
Preference number: 5 (lower is better)
Translates to: KVRSATLKHPLPSKERHRIESSV*EICSHV
Trigger: GACATGAGAACATATTTCCAAGACAGAGGATTCTAT...TCTGTGCCTCTCCTTGGATGGAAGGGGGTGCTTTAGTGTGGCACTCCTGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTGGTCGCGTTCCGCATTaGCCCTTGTGTGTCGTAAGT +
Preference number: 5 (lower is better)
Translates to: DSLLQLSQEIERSLSSTAGRVPH*PLCVVS
Trigger: ACTTACGACACACAAGGGCAAATGCGGAACGCGACC...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACCGTGCTTGTTTTCTTTaGCAGCAGTATCTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHRACFL*QQYLVQ
Trigger: CTGGACTAGATACTGCTGCAAAAGAAAACAAGCACG...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTGCAGGTCAGAACAGGTaGTATCAGCCCGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: LFLALAIPLQLRQTANRTAGQNR*YQPEEI
Trigger: GATTTCTTCGGGCTGATACAACCTGTTCTGACCTGC...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCCATGTTGGATCATACTaGCAGGGACAAAGAAGGACC +
Preference number: 5 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFHVGSY*QGQRRT
Trigger: GGTCCTTCTTTGTCCCTGCAAGTATGATCCAACATG...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGGTGCACACAAGGGCCTCTTCACCAGTCAATTGAAAAGTCAGGAGTGCCACACTGCCTAGATTTGAAATaGTATCCTATAATTTGCCCC +
Preference number: 5 (lower is better)
Translates to: RCTQGPLHQSIEKSGVPHCLDLK*YPIICP
Trigger: GGGGCAAATTATAGGATACAATTTCAAATCTAGGCA...GTGTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAGGCCCTTGTGTGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGGAAAAGTCATCTTGTaGGAATTTGTGGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRGKVIL*EFVVVA
Trigger: AGCCACCACCACAAATTCCAACAAGATGACTTTTCC...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTAACTGTGTTCCCACCTaGGCTCAGAGAGGATTTGGT +
Preference number: 5 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFNCVPT*AQRGFG
Trigger: ACCAAATCCTCTCTGAGCCAAGGTGGGAACACAGTT...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp ATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGCTTTTGTAGGCATTGAGAACTACCAGCTCAAGTTTTaGGTCGGCAGTCAGGCCTAC +
Preference number: 5 (lower is better)
Translates to: IEVYFHCLVKLAFVGIENYQLKF*VGSQAY
Trigger: GTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGTA...GTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATGGTCGCGTTCCGCATTaGCCCTTGTGTGTCGTAAGT +
Preference number: 5 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYGRVPH*PLCVVS
Trigger: ACTTACGACACACAAGGGCAAATGCGGAACGCGACC...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219299.8
CDS-3UTR CAA 90 bp ACCACCAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAGATTCCTTGCTTCAATaGTCTCAAGAAATTGAGCGT +
Preference number: 5 (lower is better)
Translates to: TTRFRICLWVSLKPNKSRDSLLQ*SQEIER
Trigger: ACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC...TCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCTTTTGGCAGGTCAGAACAGGTaGTATCAGCCCGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: VVSARRNHLGFLRACFLLAGQNR*YQPEEI
Trigger: GATTTCTTCGGGCTGATACAACCTGTTCTGACCTGC...CAAAAGAAAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCATGTTGGATCATACTaGCAGGGACAAAGAAGGACC +
Preference number: 5 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAHVGSY*QGQRRT
Trigger: GGTCCTTCTTTGTCCCTGCAAGTATGATCCAACATG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCATCTTGTTGGAATTaGTGGTGGTGGCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFSSCWN*WWWLPR
Trigger: TCTAGGCAGCCACCACCACAAATTCCAACAAGATGA...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp TTCTGCCTTTCTGCTGCTCGTGGTTCAGTCTGTTCAGATTGTTTCCTGTTGTTATCTGGTGTGGCTTCCTaGGAAAAGAGGAGCTTTATT +
Preference number: 5 (lower is better)
Translates to: FCLSAARGSVCSDCFLLLSGVAS*EKRSFI
Trigger: AATAAAGCTCCTCTTTTCCAAGGAAGCCACACCAGA...TAACAACAGGAAACAATCTGAACAGACTGAACCACGAGCAGCAGAAAGGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCTCTTCACCAGTCAATaGAAAAGTCAGGAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: HRILCLGNMFSCPEVFKALFTSQ*KSQECH
Trigger: GTGGCACTCCTGACTTTTCAATTGACTGGTGAAGAG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCCCACTGTCAGGGCTTTaGCTGAATGTCAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAPLSGL*LNVKGK
Trigger: TTTTCCCTTGACATTCAGCAAAAGCCCTGACAGTGG...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTGTTCCGCATTTGCCCTaGTGTGTCGTAAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: DSLLQLSQEIERSLSSTAVPHLP*CVVSHP
Trigger: AGGATGACTTACGACACACAAGGGCAAATGCGGAAC...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp ATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCATCACTTTCTGAGTGGCGATTCCTTGCTTCAATaGTCTCAAGAAATTGAGCGT +
Preference number: 5 (lower is better)
Translates to: IIPPAVHVLNVFHHFLSGDSLLQ*SQEIER
Trigger: ACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC...GCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR CAA 90 bp TGCCCTTCCAAAGTTGGTGTAACATCTATTGAGTGCCTATTTTGTACTGGGTCCATCTCCTTGTCCAGATaGAGGTATATTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: CPSKVGVTSIECLFCTGSISLSR*RYISIA
Trigger: GGCAATGGAAATATACCTCAATCTGGACAAGGAGAT...GGACCCAGTACAAAATAGGCACTCAATAGATGTTACACCAACTTTGGAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCGCCTGCAACTGCTCATaGGTTATTTTCATTCGATTC +
Preference number: 5 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFACNCS*VIFIRF
Trigger: GAATCGAATGAAAATAACCAATGAGCAGTTGCAGGC...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTCGTGCTTGTTTTCTTTaGCAGCAGTATCTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFRACFL*QQYLVQ
Trigger: CTGGACTAGATACTGCTGCAAAAGAAAACAAGCACG...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CACCATTTAATGGTGACCCGTCCCCATAGAATCCTCTGTCTTGGAAATATGTTCTGGTTTCCTTCGTGCTaGTTTTCTTTTGCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: HHLMVTRPHRILCLGNMFWFPSC*FSFAAV
Trigger: TACTGCTGCAAAAGAAAACAAGCACGAAGGAAACCA...GAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCACCATTAAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTCCCGAAGAAATCATCTaGGTTTCCTTCGTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LFLALAIPLQLRQTANRTPEEII*VSFVLV
Trigger: AACAAGCACGAAGGAAACCAAGATGATTTCTTCGGG...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCGGAAAAGTCATCTTGTaGGAATTTGTGGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: HRILCLGNMFSCPEVFKAGKVIL*EFVVVA
Trigger: AGCCACCACCACAAATTCCAACAAGATGACTTTTCC...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CAGGTTCAGAATCTGCCTATGGGTTTCCCTGAAACCCAACAAAAGCAGAATCACGTAGCTAATATTCTATaGAGTGTTTGCTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: QVQNLPMGFPETQQKQNHVANIL*SVCCVP
Trigger: TGGCACACAGCAAACACTCAATAGAATATTAGCTAC...GTGATTCTGCTTTTGTTGGGTTTCAGGGAAACCCATAGGCAGATTCTGAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp AGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTGCTTGTTTTCAGATTGTTTCCTGTaGTTAATTGCGGCCCCATTC +
Preference number: 5 (lower is better)
Translates to: RTGCISPKKSSWFPSCLFSDCFL*LIAAPF
Trigger: GAATGGGGCCGCAATTAACAACAGGAAACAATCTGA...AAACAAGCACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS CCA 90 bp CCCTCCGGCGGTTCATGTCCTCAATGTATTTCATCACTTTCTGAGTaGCCAAAATACTCCCTTTCTTCTTGGATATGGCTTTTAGAATAT +
Preference number: 5 (lower is better)
Translates to: PSGGSCPQCISSLSE*PKYSLSSWIWLLEY
Trigger: ATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219299.8
ENST00000443128.6
ENST00000561517.5
ENST00000616795.1
CDS-3UTR CAA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTATCTCCTTGTCCAGATaGAGGTATATTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: LFLALAIPLQLRQTANRTISLSR*RYISIA
Trigger: GGCAATGGAAATATACCTCAATCTGGACAAGGAGAT...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CAGCAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTATCTCCTTGTCCAGATaGAGGTATATTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: QQDLLVQIEVYFHCLVKLISLSR*RYISIA
Trigger: GGCAATGGAAATATACCTCAATCTGGACAAGGAGAT...AAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp TGCAGGTCAGAACAGGTTGTATCAGCCCGAAGAAATCATCTTGGTTTCCTTCGTATAGAATCCTCTGTCTaGGAAATATGTTCTCATGTC +
Preference number: 5 (lower is better)
Translates to: CRSEQVVSARRNHLGFLRIESSV*EICSHV
Trigger: GACATGAGAACATATTTCCAAGACAGAGGATTCTAT...ACGAAGGAAACCAAGATGATTTCTTCGGGCTGATACAACCTGTTCTGACCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CAGCAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTGATTCCTTGCTTCAATaGTCTCAAGAAATTGAGCGT +
Preference number: 5 (lower is better)
Translates to: QQDLLVQIEVYFHCLVKLDSLLQ*SQEIER
Trigger: ACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC...AAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp CATAGAATCCTCTGTCTTGGAAATATGTTCTCATGTCCAGAGGTCTTCAAAGCCTCAGTTCTTGATTCCTaGCTTCAATTGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: HRILCLGNMFSCPEVFKASVLDS*LQLSQE
Trigger: TTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGA...GGCTTTGAAGACCTCTGGACATGAGAACATATTTCCAAGACAGAGGATTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp TCCTTCATATTATCCCTCCGGCGGTTCATGTCCTCAATGTATTTCATCACTTTCTCAGTTCTTGATTCCTaGCTTCAATTGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: SFILSLRRFMSSMYFITFSVLDS*LQLSQE
Trigger: TTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGA...GAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561517.5
CDS-3UTR CAA 90 bp CAGCAAGATCTCCTTGTCCAGATTGAGGTATATTTCCATTGCCTTGTGAAGCTTTCAGTTCTTGATTCCTaGCTTCAATTGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: QQDLLVQIEVYFHCLVKLSVLDS*LQLSQE
Trigger: TTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGA...AAGCTTCACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp GATTCCTTGCTTCAATTGTCTCAAGAAATTGAGCGTTCTCTATCTTCAACTGCTCTCAGCAAGATCTCCTaGTCCAGATTGAGGTATATT +
Preference number: 5 (lower is better)
Translates to: DSLLQLSQEIERSLSSTALSKIS*SRLRYI
Trigger: AATATACCTCAATCTGGACAAGGAGATCTTGCTGAG...AGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616795.1
CDS-3UTR CAA 90 bp CTTTTTCTTGCTCTGGCTATACCACTACAGTTAAGACAAACTGCGAATCGGACTTGCCTAGATTTGAAATaGTATCCTATAATTTGCCCC +
Preference number: 5 (lower is better)
Translates to: LFLALAIPLQLRQTANRTCLDLK*YPIICP
Trigger: GGGGCAAATTATAGGATACAATTTCAAATCTAGGCA...AGTCCGATTCGCAGTTTGTCTTAACTGTAGTGGTATAGCCAGAGCAAGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS-3UTR CAA 90 bp CTAGCTAATGATGCCAAGCTTCTACTCCGTCACTTTAAGTTAGATAAAGTGTATCTCAGCAAGATCTCCTaGTCCAGATTGAGGTATATT +
Preference number: 5 (lower is better)
Translates to: LANDAKLLLRHFKLDKVYLSKIS*SRLRYI
Trigger: AATATACCTCAATCTGGACAAGGAGATCTTGCTGAG...ATACACTTTATCTAACTTAAAGTGACGGAGTAGAAGCTTGGCATCATTAGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS GCA 90 bp CTTCTTATAAGGACACCAGTTGTAAGATTTATTTTTCTAGAATCATaGAGTGCATTCTCCTTTGTGACTGGCTTCGTTCATTCAACATCA +
Preference number: 5 (lower is better)
Translates to: LLIRTPVVRFIFLES*SAFSFVTGFVHSTS
Trigger: TGATGTTGAATGAACGAAGCCAGTCACAAAGGAGAATGCACTGCATGATTCTAGAAAAATAAATCTTACAACTGGTGTCCTTATAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569374.1
CDS GCA 72 bp CATCACTCTGCCGAAGCGGCCCCTGCCAATGCCGTGTaGCCAGGAGCTCCGGGTGCCGGCGGCCACGCGTCA +
Preference number: 6 (lower is better)
Translates to: HHSAEAAPANAV*PGAPGAGGHAS
Trigger: TGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6
CDS GCA 72 bp CATCAGTCATCACTCTGCCGAAGCGGCCCCTGCCAATaGCGTGTGCCCAGGAGCTCCGGGTGCCGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: HQSSLCRSGPCQ*RVPRSSGCRRP
Trigger: TGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219299.8
ENST00000443128.6
ENST00000561517.5
CDS GCA 72 bp ACTCATCATCAGTCATCACTCTGCCGAAGCGGCCCCTaGCAATGCCGTGTGCCCAGGAGCTCCGGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: THHQSSLCRSGP*QCRVPRSSGCR
Trigger: CCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGATGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219299.8
ENST00000443128.6
ENST00000561517.5
CDS GCA 72 bp AGAGGACGCTCTCGGACTCATCATCAGTCATCACTCTaGCGAAGCGGCCCCTGCCAATGCCGTGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RGRSRTHHQSSL*RSGPCQCRVPR
Trigger: CCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGATGAGTCCGAGAGCGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219299.8
ENST00000443128.6
ENST00000561517.5
CDS GCA 72 bp CAGTTCCGGAGGCCAGAAGTCTGGAGGCAAGGTGTCTaGACAGCCACTCTCCCTCTGAAGGCTCTAGGAGGA +
Preference number: 6 (lower is better)
Translates to: QFRRPEVWRQGV*TATLPLKALGG
Trigger: TCCTCCTAGAGCCTTCAGAGGGAGAGTGGCTGTGCAGACACCTTGCCTCCAGACTTCTGGCCTCCGGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569374.1
CDS CCA 72 bp AGCTGGATAACAGGCAGCTCCAGCTCCGACCCTTCATaGGAGTCGGAGAGGACGCTCTCGGACTCATCATCA +
Preference number: 6 (lower is better)
Translates to: SWITGSSSSDPS*ESERTLSDSSS
Trigger: TGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219299.8
ENST00000443128.6
ENST00000561517.5
ENST00000566498.1
ENST00000616795.1
CDS TCA 72 bp AAGCACACCGTCTGGCATGAGAGAGACTCCTCCGGCTaGAACCCTCACTTCCCCAATTACCCTCTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: KHTVWHERDSSG*NPHFPNYPLGF
Trigger: GAAGCCCAGAGGGTAATTGGGGAAGTGAGGGTTTCAGCCGGAGGAGTCTCTCTCATGCCAGACGGTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566498.1
CDS CCA 72 bp TCAGGCCTACCCCACGGTCCATACCTGTCCGGGATTTaGATCTACGCCTGCCTCGAAACTGTGCATAATCTG +
Preference number: 6 (lower is better)
Translates to: SGLPHGPYLSGI*IYACLETVHNL
Trigger: CAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219299.8
ENST00000569374.1
ENST00000616795.1
CDS CAA 72 bp CCTCGTGATGCTGCAGGTCGCGTTCCGCATTTGCCCTaGTGTGTCGTAAGTCATCCTTCATGTCCGCAACCT +
Preference number: 6 (lower is better)
Translates to: PRDAAGRVPHLP*CVVSHPSCPQP
Trigger: AGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACGCGACCTGCAGCATCACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000616795.1
CDS CCA 72 bp AAATGTATCATCTCACAGTTCCGGAGGCCAGAAGTCTaGAGGCAAGGTGTCTGCACAGCCACTCTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: KCIISQFRRPEV*RQGVCTATLPL
Trigger: CAGAGGGAGAGTGGCTGTGCAGACACCTTGCCTCCAGACTTCTGGCCTCCGGAACTGTGAGATGATACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569374.1
CDS CAA 90 bp TCCAATCTCTGCCTCCATCTTTGCATGGACTTCTTCCCTGTGGCTTaGTGTGTCCCCTCCTCTTCTTATAAGGACACCAGTTGTAAGATT +
Preference number: 6 (lower is better)
Translates to: SNLCLHLCMDFFPVA*CVPSSSYKDTSCKI
Trigger: AATCTTACAACTGGTGTCCTTATAAGAAGAGGAGGGGACACACAAAGCCACAGGGAAGAAGTCCATGCAAAGATGGAGGCAGAGATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569374.1
CDS CCA 72 bp TCATTGGTTATTTTCATTCGATTCCAAGCCTTACGATaGCCTTTTAAGGACATCTCTGCTATCTCCACTTTC +
Preference number: 6 (lower is better)
Translates to: SLVIFIRFQALR*PFKDISAISTF
Trigger: GAAAGTGGAGATAGCAGAGATGTCCTTAAAAGGCCATCGTAAGGCTTGGAATCGAATGAAAATAACCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219299.8
ENST00000443128.6