RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC107 (Homo sapiens)

Ensembl gene IDs: ENSG00000159884

Ensembl transcript IDs: ENST00000327351.6, ENST00000378406.5, ENST00000378407.7, ENST00000378409.7, ENST00000421582.2, ENST00000426546.7

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCAGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTaGTGTCACACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACA +
Preference number: 1 (lower is better)
Translates to: PQEYEEKSWSSLYLL*CHTGRQPLFVLIRT
Trigger: TGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
3UTR CCA 90 bp CGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTaGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGA +
Preference number: 1 (lower is better)
Translates to: RGKELELPLSSLLSH*KAASFCPNKDSSSR
Trigger: TCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
3UTR-3UTR CCA 90 bp CAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTACGCGGGCATGCTGGTaGCCTCAGGAATACGAGGAA +
Preference number: 2 (lower is better)
Translates to: QRLCLHLQQTRLPSLHLVTRACW*PQEYEE
Trigger: TTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGT...AACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421582.2
3UTR-3UTR GCA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 2 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR GCA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 2 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR CAA 90 bp GCCTCTGTGTGGGGAGAGATCAGGAATGTTCCAGTTTCAGAGACTTaGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGT +
Preference number: 2 (lower is better)
Translates to: ASVWGEIRNVPVSET*SPPPADSPPEPSPG
Trigger: ACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCTGATCTCTCCCCACACAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTTGCCACAGCCTGGCTaGACCTTCTCCGTAGTCCCC +
Preference number: 2 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPLPQPG*TFSVVP
Trigger: GGGGACTACGGAGAAGGTGCAGCCAGGCTGTGGCAA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 2 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPSQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR GCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTATCCTTGTCCGGCTTaGTATCTTGCAGCAGCTCGT +
Preference number: 2 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFYPCPA*YLAAAR
Trigger: ACGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATA...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR GCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCAACTGGGCCAGCTGTTaGTCTGGGGATAAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFNWASC*SGDKGK
Trigger: TTTTCCCTTATCCCCAGAGCAACAGCTGGCCCAGTT...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421582.2
3UTR-3UTR CCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCGCAGCAGCTCGTGGATaGTCCATAGCTTCATGTTCA +
Preference number: 2 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFAAARG*SIASCS
Trigger: TGAACATGAAGCTATGGACCATCCACGAGCTGCTGC...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000421582.2
3UTR-3UTR TCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGGCCTTCACCTGGTTCTaGAGCCTCCATATCCTTGTC +
Preference number: 2 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPAFTWF*SLHILV
Trigger: GACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGC...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGGAAGAGGTCTGCTaGCCTCTGGTTCTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPQEEVC*PLVLKP
Trigger: AGGCTTCAGAACCAGAGGCCAGCAGACCTCTTCCTG...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327351.6
3UTR-3UTR CCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 2 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLSQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421582.2
3UTR-3UTR CCA 90 bp AATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGGAAATGTCCACTCAGTaGCTCCCAACCTATGTCCCC +
Preference number: 2 (lower is better)
Translates to: NVPVSETLSPPPADSPPEEMSTQ*LPTYVP
Trigger: GGGGACATAGGTTGGGAGCCACTGAGTGGACATTTC...CTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000421582.2
3UTR-3UTR CCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGTACGAGGAAAAGAGCTaGAGCTCCCTCTATCTTCTC +
Preference number: 2 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPYEEKS*SSLYLL
Trigger: GAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTA...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421582.2
3UTR-3UTR CCA 90 bp AATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGTCTTGCAGCAGCTCGTaGATGGTCCATAGCTTCATG +
Preference number: 2 (lower is better)
Translates to: NVPVSETLSPPPADSPPESCSSS*MVHSFM
Trigger: CATGAAGCTATGGACCATCCACGAGCTGCTGCAAGA...CTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CCA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCTCTTGCAGCAGCTCGTaGATGGTCCATAGCTTCATG +
Preference number: 2 (lower is better)
Translates to: RNVPVSETLSPPPADSPPSCSSS*MVHSFM
Trigger: CATGAAGCTATGGACCATCCACGAGCTGCTGCAAGA...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR GCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 2 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421582.2
3UTR-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTCTTGCAGCAGCTCGTaGATGGTCCATAGCTTCATG +
Preference number: 2 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQSCSSS*MVHSFM
Trigger: CATGAAGCTATGGACCATCCACGAGCTGCTGCAAGA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGTACGAGGAAAAGAGCTaGAGCTCCCTCTATCTTCTC +
Preference number: 2 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLYEEKS*SSLYLL
Trigger: GAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTA...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
3UTR-3UTR GCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGCTTCTGTCTCAGTTTTaGTATGAGAAAAGGGATTTT +
Preference number: 2 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLLLSQF*YEKRDF
Trigger: AAAATCCCTTTTCTCATAGCAAAACTGAGACAGAAG...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
3UTR-3UTR CAA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGTGTCTGGGCCAGCTGTaGTGTCAACTGGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRCLGQL*CQLGQL
Trigger: CAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACA...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421582.2
3UTR-3UTR CAA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTGTGACTGGGGCCCTTaGCCACAGCCTGGCTGCACC +
Preference number: 3 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPCDWGP*PQPGCT
Trigger: GGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CAA 90 bp CAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 3 (lower is better)
Translates to: QRLCLHLQQTRLPSLHLVVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...AACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CAA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 3 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CAA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 3 (lower is better)
Translates to: RNVPVSETLSPPPADSPPVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR-3UTR CAA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAATATCCTTGTCCGGCTaGCTATCTTGCAGCAGCTCG +
Preference number: 3 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEISLSG*LSCSSS
Trigger: CGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATAT...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
3UTR GCA 72 bp TACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTaGTGTCACACTGGAAGGCAGCCTCTTTTTGTCCTA +
Preference number: 3 (lower is better)
Translates to: YEEKSWSSLYLL*CHTGRQPLFVL
Trigger: TAGGACAAAAAGAGGCTGCCTTCCAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCAAGAGCCGGGGTGGGCTaGGTTCCCTGGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPRAGVG*VPWVCP
Trigger: CGGGCACACCCAGGGAACGCAGCCCACCCCGGCTCT...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAGGATCGGGCGGGCGGTaGCGAAGCGGTCCGGCATTG +
Preference number: 4 (lower is better)
Translates to: PPPADSPPEPSPGSEASIGSGGR*RSGPAL
Trigger: CAATGCCGGACCGCTTCGGCACCGCCCGCCCGATCC...TATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCAGCTCCAGAGCCGGGGTaGGCTGCGTTCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPAPEPG*AAFPGC
Trigger: ACACCCAGGGAACGCAGCCCACCCCGGCTCTGGAGC...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTGAAGCGGTCCGGCATTaGCCGGCCGCCCCAACGCGC +
Preference number: 4 (lower is better)
Translates to: QRLCLHLQQTRLPSLHLVEAVRH*PAAPTR
Trigger: GCGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTC...AACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378407.7
CDS-3UTR CCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAGAAGCGGTCCGGCATTaGCCGGCCGCCCCAACGCGC +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGEAVRH*PAAPTR
Trigger: GCGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTC...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR TCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCGCTCGCGTTGATCCTTaGGCGGTGGTCGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFARVDP*AVVAAG
Trigger: CCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGC...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGGCTCGCGTTGATCCTTaGGCGGTGGTCGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWARVDP*AVVAAG
Trigger: CCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGC...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAGCTCGCGTTGATCCTTaGGCGGTGGTCGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGARVDP*AVVAAG
Trigger: CCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGC...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp CCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATACGGGTCCGCTCGCGTTaGTCCTTGAGCGGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: PPPADSPPEPSPGSEASIRVRSR*SLSGGR
Trigger: GCGACCACCGCTCAAGGATCAACGCGAGCGGACCCG...TATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTGGGATCGGGCGGGCGGTaGCGAAGCGGTCCGGCATTG +
Preference number: 4 (lower is better)
Translates to: PADSPPEPSPGSEASISLGSGGR*RSGPAL
Trigger: CAATGCCGGACCGCTTCGGCACCGCCCGCCCGATCC...CAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCGGATCGGGCGGGCGGTaGCGAAGCGGTCCGGCATTG +
Preference number: 4 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFGSGGR*RSGPAL
Trigger: CAATGCCGGACCGCTTCGGCACCGCCCGCCCGATCC...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAGAGCCGGGGTGGGCTaGGTTCCCTGGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRRAGVG*VPWVCP
Trigger: CGGGCACACCCAGGGAACGCAGCCCACCCCGGCTCT...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp CCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCCCCGGAGGTCGGGATTaGCGCGGTCTCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: PPADSPPEPSPGSEASISPGGRD*RGLLGP
Trigger: GGGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGG...GGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGGTGGGCTGCGTTCCCTaGGTGTGCCCGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWVGCVP*VCPEVG
Trigger: CCCGACCTCCGGGCACACCCAGGGAACGCAGCCCAC...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAGTGGGCTGCGTTCCCTaGGTGTGCCCGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGVGCVP*VCPEVG
Trigger: CCCGACCTCCGGGCACACCCAGGGAACGCAGCCCAC...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCAGGGATTTTTGGGCCCTaGACGCGGGCATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPGIFGP*TRACWW
Trigger: CCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCC...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR GCA 90 bp GTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTAACTGCGCCCGCCATTaGCGGCCCACGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VSETLSPPPADSPPEPSPNCARH*RPTGGG
Trigger: CCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTT...AGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAAACTGCGCCCGCCATTaGCGGCCCACGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TLSPPPADSPPEPSPGSENCARH*RPTGGG
Trigger: CCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTT...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGAACTGCGCCCGCCATTaGCGGCCCACGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKENCARH*RPTGGG
Trigger: CCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTT...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PPADSPPEPSPGSEASISTQERN*ARHCRP
Trigger: GGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGT...GGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp GTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTAGAGCCGGGGTGGGCTaGGTTCCCTGGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VSETLSPPPADSPPEPSPRAGVG*VPWVCP
Trigger: CGGGCACACCCAGGGAACGCAGCCCACCCCGGCTCT...AGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGTGGGCTGCGTTCCCTaGGTGTGCCCGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEVGCVP*VCPEVG
Trigger: CCCGACCTCCGGGCACACCCAGGGAACGCAGCCCAC...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp TGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCCGGGTCCGCTCGCGTTaGTCCTTGAGCGGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: CSSFRDFVSTSSRLASRARVRSR*SLSGGR
Trigger: GCGACCACCGCTCAAGGATCAACGCGAGCGGACCCG...GGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp CCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCCAGCCAAGGCTGTaGCTGGGGCCCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: PPPADSPPEPSPGSEASISQPRL*LGPFAT
Trigger: TGTGGCAAAGGGCCCCAGTCACAGCCTTGGCTGGGA...TATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFTQERN*ARHCRP
Trigger: GGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGT...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGTQERN*ARHCRP
Trigger: GGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGT...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYTQERN*ARHCRP
Trigger: GGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGT...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAACCCGGAGGTCGGGATTaGCGCGGTCTCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEPGGRD*RGLLGP
Trigger: GGGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGG...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SPPPADSPPEPSPGSEASSQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...GGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp CCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTGTCCCAGCCAAGGCTGTaGCTGGGGCCCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: PADSPPEPSPGSEASISLSQPRL*LGPFAT
Trigger: TGTGGCAAAGGGCCCCAGTCACAGCCTTGGCTGGGA...CAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGATCCCAGCCAAGGCTGTaGCTGGGGCCCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGSQPRL*LGPFAT
Trigger: TGTGGCAAAGGGCCCCAGTCACAGCCTTGGCTGGGA...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTGGATCGGGCGGGCGGTaGCGAAGCGGTCCGGCATTG +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPGSGGR*RSGPAL
Trigger: CAATGCCGGACCGCTTCGGCACCGCCCGCCCGATCC...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTAACTGCGCCCGCCATTaGCGGCCCACGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPNCARH*RPTGGG
Trigger: CCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTAGAGCCGGGGTGGGCTaGGTTCCCTGGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPRAGVG*VPWVCP
Trigger: CGGGCACACCCAGGGAACGCAGCCCACCCCGGCTCT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATGGCTGCTGCTTGCTTaGCTCCTCGTGGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: PPPADSPPEPSPGSEASIWLLLA*LLVENR
Trigger: GCGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCA...TATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp TCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCGCAGTGGCTGCTGCTTaGTTGCCTCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SPPPADSPPEPSPGSEASAVAAA*LPPRGE
Trigger: TTCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGC...GGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTGTGGGCTGCGTTCCCTaGGTGTGCCCGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPVGCVP*VCPEVG
Trigger: CCCGACCTCCGGGCACACCCAGGGAACGCAGCCCAC...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTTTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: QRLCLHLQQTRLPSLHLVLILER*SPPGFR
Trigger: ACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAA...AACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGATTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGLILER*SPPGFR
Trigger: ACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAA...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGTTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRLILER*SPPGFR
Trigger: ACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAA...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGGCTCGCGTTGATCCTTaGGCGGTGGTCGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQARVDP*AVVAAG
Trigger: CCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGC...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCGGGTCCGCTCGCGTTaGTCCTTGAGCGGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPRVRSR*SLSGGR
Trigger: GCGACCACCGCTCAAGGATCAACGCGAGCGGACCCG...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGGGCCAGCTGTTGCTCTaGCTGCAGTGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRGQLLL*LQWLLL
Trigger: AAGCAGCAGCCACTGCAGTCAGAGCAACAGCTGGCC...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGAACTGCGCCCGCCATTaGCGGCCCACGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQNCARH*RPTGGG
Trigger: CCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTT...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCAACTGCGCCCGCCATTaGCGGCCCACGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTNCARH*RPTGGG
Trigger: CCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTT...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGATGCGTTCCCTGGGTGTaGCCGGAGGTCGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRCVPWV*PEVGIG
Trigger: GCCAATCCCGACCTCCGGGCACACCCAGGGAACGCA...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTGGCTGCTGCTTGCTTaGCTCCTCGTGGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWWLLLA*LLVENR
Trigger: GCGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCA...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCGCAGTGGCTGCTGCTTaGTTGCCTCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPADSPPEPSPGSEASISAVAAA*LPPRGE
Trigger: TTCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGC...GGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAAACTGGGCCAGCTGTTaGTCTGACTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPADSPPEPSPGSEASINWASC*SDCSGC
Trigger: GCAGCCACTGCAGTCAGAGCAACAGCTGGCCCAGTT...TATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCCCGGAGGTCGGGATTaGCGCGGTCTCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPPGGRD*RGLLGP
Trigger: GGGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGG...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGGTGGGCTGCGTTCCCTaGGTGTGCCCGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQVGCVP*VCPEVG
Trigger: CCCGACCTCCGGGCACACCCAGGGAACGCAGCCCAC...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGCTCCAGAGCCGGGGTaGGCTGCGTTCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RNVPVSETLSPPPADSPPAPEPG*AAFPGC
Trigger: ACACCCAGGGAACGCAGCCCACCCCGGCTCTGGAGC...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWSQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGGCTCGCGTTGATCCTTaGGCGGTGGTCGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLARVDP*AVVAAG
Trigger: CCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGC...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGGGCCAGCTGTTGCTCTaGCTGCAGTGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKEGQLLL*LQWLLL
Trigger: AAGCAGCAGCCACTGCAGTCAGAGCAACAGCTGGCC...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR TCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCAGCCTTCACCTGGTTCTaGAGCCTCCATATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPAFTWF*SLHILV
Trigger: GACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGC...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGGGATTTTTGGGCCCTaGACGCGGGCATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRGIFGP*TRACWW
Trigger: CCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCC...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CAGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGGATCGGGCGGGCGGTaGCGAAGCGGTCCGGCATTG +
Preference number: 4 (lower is better)
Translates to: QEYEEKSWSSLYLLCCHTGSGGR*RSGPAL
Trigger: CAATGCCGGACCGCTTCGGCACCGCCCGCCCGATCC...AGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGTGCGTTCCCTGGGTGTaGCCGGAGGTCGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: NVPVSETLSPPPADSPPECVPWV*PEVGIG
Trigger: GCCAATCCCGACCTCCGGGCACACCCAGGGAACGCA...CTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCTGCGTTCCCTGGGTGTaGCCGGAGGTCGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: RNVPVSETLSPPPADSPPCVPWV*PEVGIG
Trigger: GCCAATCCCGACCTCCGGGCACACCCAGGGAACGCA...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAACTGGGCCAGCTGTTaGTCTGACTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGNWASC*SDCSGC
Trigger: GCAGCCACTGCAGTCAGAGCAACAGCTGGCCCAGTT...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp CCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: PPADSPPEPSPGSEASISSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...GGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGCCCGGAGGTCGGGATTaGCGCGGTCTCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQPGGRD*RGLLGP
Trigger: GGGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGG...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGGCTCCAGAGCCGGGGTaGGCTGCGTTCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQAPEPG*AAFPGC
Trigger: ACACCCAGGGAACGCAGCCCACCCCGGCTCTGGAGC...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGTTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPLILER*SPPGFR
Trigger: ACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAA...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGCCCTTTGCCACAGCCTaGCTGCACCTTCTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWPFATA*LHLLRS
Trigger: ACTACGGAGAAGGTGCAGCCAGGCTGTGGCAAAGGG...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCCTTTGCCACAGCCTaGCTGCACCTTCTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYPFATA*LHLLRS
Trigger: ACTACGGAGAAGGTGCAGCCAGGCTGTGGCAAAGGG...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKESQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTGAAGCGGTCCGGCATTaGCCGGCCGCCCCAACGCGC +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPEAVRH*PAAPTR
Trigger: GCGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTC...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR CCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCAGAAATGTCCACTCAGTaGCTCCCAACCTATGTCCCC +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPEMSTQ*LPTYVP
Trigger: GGGGACATAGGTTGGGAGCCACTGAGTGGACATTTC...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000421582.2
CDS-3UTR TCA 90 bp CAGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTCGGGTCCGCTCGCGTTaGTCCTTGAGCGGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: QEYEEKSWSSLYLLCCHTRVRSR*SLSGGR
Trigger: GCGACCACCGCTCAAGGATCAACGCGAGCGGACCCG...AGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGCGGGTCCGCTCGCGTTaGTCCTTGAGCGGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLRVRSR*SLSGGR
Trigger: GCGACCACCGCTCAAGGATCAACGCGAGCGGACCCG...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGGGCCAGCTGTTGCTCTaGCTGCAGTGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPGQLLL*LQWLLL
Trigger: AAGCAGCAGCCACTGCAGTCAGAGCAACAGCTGGCC...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQTQERN*ARHCRP
Trigger: GGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGT...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTGCGTTCCCTGGGTGTaGCCGGAGGTCGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQCVPWV*PEVGIG
Trigger: GCCAATCCCGACCTCCGGGCACACCCAGGGAACGCA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTAGAGCCGGGGTGGGCTaGGTTCCCTGGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPRAGVG*VPWVCP
Trigger: CGGGCACACCCAGGGAACGCAGCCCACCCCGGCTCT...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGATGGCTGCTGCTTGCTTaGCTCCTCGTGGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRWLLLA*LLVENR
Trigger: GCGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCA...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCAGTGGCTGCTGCTTaGTTGCCTCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEAVAAA*LPPRGE
Trigger: TTCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGC...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp TGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTCTGACTGCAGTGGCTaGTGCTTGCTTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CSSFRDFVSTSSRLASRASDCSG*CLLASS
Trigger: CGAGGAGGCAAGCAAGCAGCAGCCACTGCAGTCAGA...GGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp CAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTGTTCTGACTGCAGTGGCTaGTGCTTGCTTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QQTRLPSLHLVLKPPYPCSDCSG*CLLASS
Trigger: CGAGGAGGCAAGCAAGCAGCAGCCACTGCAGTCAGA...ACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGTCTGACTGCAGTGGCTaGTGCTTGCTTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKESDCSG*CLLASS
Trigger: CGAGGAGGCAAGCAAGCAGCAGCCACTGCAGTCAGA...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp CCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCAGCTGTTGCTCTGACTaGAGTGGCTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PPADSPPEPSPGSEASISSCCSD*SGCCLL
Trigger: AAGCAAGCAGCAGCCACTGCAGTCAGAGCAACAGCT...GGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGAGGTTGTTCAGGTGCTaGTCTGTCTGGGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWRLFRC*SVWASC
Trigger: ACAGCTGGCCCAGACAGAGCAGCACCTGAACAACCT...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCAGGTTGTTCAGGTGCTaGTCTGTCTGGGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFRLFRC*SVWASC
Trigger: ACAGCTGGCCCAGACAGAGCAGCACCTGAACAACCT...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAGGTTGTTCAGGTGCTaGTCTGTCTGGGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGRLFRC*SVWASC
Trigger: ACAGCTGGCCCAGACAGAGCAGCACCTGAACAACCT...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTGATCAGGTTGTTCAGGTaGTGCTCTGTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PADSPPEPSPGSEASISLIRLFR*CSVWAS
Trigger: GCTGGCCCAGACAGAGCAGCACCTGAACAACCTGAT...CAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCATCAGGTTGTTCAGGTaGTGCTCTGTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFIRLFR*CSVWAS
Trigger: GCTGGCCCAGACAGAGCAGCACCTGAACAACCTGAT...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGTTGCCACAGCCTGGCTaGACCTTCTCCGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPLPQPG*TFSVVP
Trigger: GGGGACTACGGAGAAGGTGCAGCCAGGCTGTGGCAA...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGATTGCCACAGCCTGGCTaGACCTTCTCCGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRLPQPG*TFSVVP
Trigger: GGGGACTACGGAGAAGGTGCAGCCAGGCTGTGGCAA...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGCCCGGAGGTCGGGATTaGCGCGGTCTCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLPGGRD*RGLLGP
Trigger: GGGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGG...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCGTGGGCTGCGTTCCCTaGGTGTGCCCGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVVGCVP*VCPEVG
Trigger: CCCGACCTCCGGGCACACCCAGGGAACGCAGCCCAC...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCGCTCCAGAGCCGGGGTaGGCTGCGTTCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPAPEPG*AAFPGC
Trigger: ACACCCAGGGAACGCAGCCCACCCCGGCTCTGGAGC...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGGCTCCAGAGCCGGGGTaGGCTGCGTTCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLAPEPG*AAFPGC
Trigger: ACACCCAGGGAACGCAGCCCACCCCGGCTCTGGAGC...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPLILER*SPPGFR
Trigger: ACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATCTTGCAGCAGCTCGTaGATGGTCCATAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPSCSSS*MVHSFM
Trigger: CATGAAGCTATGGACCATCCACGAGCTGCTGCAAGA...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPSQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRSQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTGGCCAGCTGTTGCTCTaGCTGCAGTGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPGQLLL*LQWLLL
Trigger: AAGCAGCAGCCACTGCAGTCAGAGCAACAGCTGGCC...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
CDS-3UTR TCA 90 bp AATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGGGCCAGCTGTTGCTCTaGCTGCAGTGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NVPVSETLSPPPADSPPEGQLLL*LQWLLL
Trigger: AAGCAGCAGCCACTGCAGTCAGAGCAACAGCTGGCC...CTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR TCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTCCCAGCCAAGGCTGTaGCTGGGGCCCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQSQPRL*LGPFAT
Trigger: TGTGGCAAAGGGCCCCAGTCACAGCCTTGGCTGGGA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR TCA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATGCCTTCACCTGGTTCTaGAGCCTCCATATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYAFTWF*SLHILV
Trigger: GACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGC...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAAACTGGGCCAGCTGTTaGTCTGACTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRNWASC*SDCSGC
Trigger: GCAGCCACTGCAGTCAGAGCAACAGCTGGCCCAGTT...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAATCAGGTTGTTCAGGTaGTGCTCTGTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEIRLFR*CSVWAS
Trigger: GCTGGCCCAGACAGAGCAGCACCTGAACAACCTGAT...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGTTGCCACAGCCTGGCTaGACCTTCTCCGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: NVPVSETLSPPPADSPPELPQPG*TFSVVP
Trigger: GGGGACTACGGAGAAGGTGCAGCCAGGCTGTGGCAA...CTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGCTAAACCCACCTGACTaGAGTGGCTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRLNPPD*SGCCLL
Trigger: AAGCAAGCAGCAGCCACTGCAGTCAGGTGGGTTTAG...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR CCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTGCTCCAGAGCCGGGGTaGGCTGCGTTCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPAPEPG*AAFPGC
Trigger: ACACCCAGGGAACGCAGCCCACCCCGGCTCTGGAGC...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATCTCTGCTGTCACACTaGAAGGCAGCCTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPSLLSH*KAASFC
Trigger: ACAAAAAGAGGCTGCCTTCCAGTGTGACAGCAGAGA...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR CCA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATACGAGGAAAAGAGCTaGAGCTCCCTCTATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPYEEKS*SSLYLL
Trigger: GAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTA...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR TCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGTCCCAGCCAAGGCTGTaGCTGGGGCCCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLSQPRL*LGPFAT
Trigger: TGTGGCAAAGGGCCCCAGTCACAGCCTTGGCTGGGA...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR TCA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCGGGATTTTTGGGCCCTaGACGCGGGCATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPGIFGP*TRACWW
Trigger: CCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCC...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVTQERN*ARHCRP
Trigger: GGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGT...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCTGCGTTCCCTGGGTGTaGCCGGAGGTCGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVCVPWV*PEVGIG
Trigger: GCCAATCCCGACCTCCGGGCACACCCAGGGAACGCA...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTGGCTGCTGCTTGCTTaGCTCCTCGTGGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQWLLLA*LLVENR
Trigger: GCGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGAGCTGTTGCTCTGACTaGAGTGGCTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKESCCSD*SGCCLL
Trigger: AAGCAAGCAGCAGCCACTGCAGTCAGAGCAACAGCT...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTAACTGGGCCAGCTGTTaGTCTGACTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPNWASC*SDCSGC
Trigger: GCAGCCACTGCAGTCAGAGCAACAGCTGGCCCAGTT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGATATCCTTGTCCGGCTTaGTATCTTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGYPCPA*YLAAAR
Trigger: ACGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATA...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTTGCCACAGCCTGGCTaGACCTTCTCCGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQLPQPG*TFSVVP
Trigger: GGGGACTACGGAGAAGGTGCAGCCAGGCTGTGGCAA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATAACTGGGCCAGCTGTTaGTCTGGGGATAAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYNWASC*SGDKGK
Trigger: TTTTCCCTTATCCCCAGAGCAACAGCTGGCCCAGTT...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR CCA 90 bp TGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCAGCTGTTGTGTCAACTaGGCCAGCTGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: CSSFRDFVSTSSRLASRASCCVN*ASCCSD
Trigger: GTCAGAGCAACAGCTGGCCCAGTTGACACAACAGCT...GGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR CCA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAGCAGCAGCTCGTGGATaGTCCATAGCTTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: RDFWALNAGMLVASGIRGAAARG*SIASCS
Trigger: TGAACATGAAGCTATGGACCATCCACGAGCTGCTGC...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp CAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTGCAGCAGCTCGTGGATaGTCCATAGCTTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QRLCLHLQQTRLPSLHLVAAARG*SIASCS
Trigger: TGAACATGAAGCTATGGACCATCCACGAGCTGCTGC...AACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGTCTTGCAGCAGCTCGTaGATGGTCCATAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRSCSSS*MVHSFM
Trigger: CATGAAGCTATGGACCATCCACGAGCTGCTGCAAGA...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTCTTGCAGCAGCTCGTaGATGGTCCATAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFSCSSS*MVHSFM
Trigger: CATGAAGCTATGGACCATCCACGAGCTGCTGCAAGA...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCCCTTTGCCACAGCCTaGCTGCACCTTCTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPPFATA*LHLLRS
Trigger: ACTACGGAGAAGGTGCAGCCAGGCTGTGGCAAAGGG...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGAGCCAAGGCTGTGACTaGGGCCCTTTGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQSQGCD*GPLPQP
Trigger: AGGCTGTGGCAAAGGGCCCCAGTCACAGCCTTGGCT...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGGAGAAAAGGGATTTTTaGGCCCTGAACGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKEEKRDF*ALNAGM
Trigger: CATGCCCGCGTTCAGGGCCCAAAAATCCCTTTTCTC...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp CCATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTCACAGAATCATTGCTCTCTGCGTTCCCTGGGTGTaGCCGGAGGTCGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: PFLPPATNSPKIHRIIALCVPWV*PEVGIG
Trigger: GCCAATCCCGACCTCCGGGCACACCCAGGGAACGCA...GAGAGCAATGATTCTGTGAATTTTTGGGGAATTTGTGGCAGGAGGGAGGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000421582.2
CDS-3UTR GCA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCTGGCTGCTGCTTGCTTaGCTCCTCGTGGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPWLLLA*LLVENR
Trigger: GCGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCA...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGGCAGTGGCTGCTGCTTaGTTGCCTCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQAVAAA*LPPRGE
Trigger: TTCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGC...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCGCAGTGGCTGCTGCTTaGTTGCCTCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTAVAAA*LPPRGE
Trigger: TTCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGC...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTCTGACTGCAGTGGCTaGTGCTTGCTTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQSDCSG*CLLASS
Trigger: CGAGGAGGCAAGCAAGCAGCAGCCACTGCAGTCAGA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTGTTATCCTTGTCCGGCTTaGTATCTTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: QQTRLPSLHLVLKPPYPCYPCPA*YLAAAR
Trigger: ACGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATA...ACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAATATCCTTGTCCGGCTTaGTATCTTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEYPCPA*YLAAAR
Trigger: ACGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATA...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCTTGCCACAGCCTGGCTaGACCTTCTCCGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPLPQPG*TFSVVP
Trigger: GGGGACTACGGAGAAGGTGCAGCCAGGCTGTGGCAA...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp GTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTTTGCTTGCCTCCTCGTaGAGAACCGCAGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: VSETLSPPPADSPPEPSPLLASS*RTAVSS
Trigger: AGATGAAACTGCGGTTCTCCACGAGGAGGCAAGCAA...AGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGTTGCTTGCCTCCTCGTaGAGAACCGCAGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKELLASS*RTAVSS
Trigger: AGATGAAACTGCGGTTCTCCACGAGGAGGCAAGCAA...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCTGTTGTGTCAACTaGGCCAGCTGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPSCCVN*ASCCSD
Trigger: GTCAGAGCAACAGCTGGCCCAGTTGACACAACAGCT...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR CCA 90 bp TGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCGCAGCAGCTCGTGGATaGTCCATAGCTTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: CSSFRDFVSTSSRLASRAAAARG*SIASCS
Trigger: TGAACATGAAGCTATGGACCATCCACGAGCTGCTGC...GGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGCCCTTTGCCACAGCCTaGCTGCACCTTCTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQPFATA*LHLLRS
Trigger: ACTACGGAGAAGGTGCAGCCAGGCTGTGGCAAAGGG...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCCCCTTTGCCACAGCCTaGCTGCACCTTCTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTPFATA*LHLLRS
Trigger: ACTACGGAGAAGGTGCAGCCAGGCTGTGGCAAAGGG...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCACGCGGGCATGCTGGTaGCCTCAGGAATACGAGGAA +
Preference number: 4 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTTRACW*PQEYEE
Trigger: TTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGT...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGGCAGTGGCTGCTGCTTaGTTGCCTCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLAVAAA*LPPRGE
Trigger: TTCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGC...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTAGCTGTTGCTCTGACTaGAGTGGCTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPSCCSD*SGCCLL
Trigger: AAGCAAGCAGCAGCCACTGCAGTCAGAGCAACAGCT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCAGCTGTTGCTCTGACTaGAGTGGCTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RNVPVSETLSPPPADSPPSCCSD*SGCCLL
Trigger: AAGCAAGCAGCAGCCACTGCAGTCAGAGCAACAGCT...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000378407.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGAGGTTGTTCAGGTGCTaGTCTGTCTGGGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQRLFRC*SVWASC
Trigger: ACAGCTGGCCCAGACAGAGCAGCACCTGAACAACCT...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGATCAGGTTGTTCAGGTaGTGCTCTGTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQIRLFR*CSVWAS
Trigger: GCTGGCCCAGACAGAGCAGCACCTGAACAACCTGAT...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTATGTTCAGAAGCTCCTaGTGGGCGCTCAAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPMFRSS*WALKKG
Trigger: CCCCTTTTTGAGCGCCCAGCAGGAGCTTCTGAACAT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327351.6
CDS-3UTR GCA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCTCCGGCTTGCTATCTTaGAGCAGCTCGTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTSGLLS*SSSWMV
Trigger: GACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGA...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGTATCCTTGTCCGGCTTaGTATCTTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPYPCPA*YLAAAR
Trigger: ACGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATA...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CCATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTCACAGAATCATTGCTCTCTTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: PFLPPATNSPKIHRIIALLILER*SPPGFR
Trigger: ACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAA...GAGAGCAATGATTCTGTGAATTTTTGGGGAATTTGTGGCAGGAGGGAGGAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000421582.2
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTAGCTGTTGTGTCAACTaGGCCAGCTGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPSCCVN*ASCCSD
Trigger: GTCAGAGCAACAGCTGGCCCAGTTGACACAACAGCT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
CDS-3UTR CCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGCAGCAGCTCGTGGATaGTCCATAGCTTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRAAARG*SIASCS
Trigger: TGAACATGAAGCTATGGACCATCCACGAGCTGCTGC...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGTCTCTGCTGTCACACTaGAAGGCAGCCTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: FWALNAGMLVASGIRGKESLLSH*KAASFC
Trigger: ACAAAAAGAGGCTGCCTTCCAGTGTGACAGCAGAGA...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATGTTTCATCTTTCCCCTaGAAACACTTGTACAGCACA +
Preference number: 4 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYVSSFP*KHLYST
Trigger: TGTGCTGTACAAGTGTTTGCAGGGGAAAGATGAAAC...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCATCAGGTTGTTCAGGTaGTGCTCTGTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPIRLFR*CSVWAS
Trigger: GCTGGCCCAGACAGAGCAGCACCTGAACAACCTGAT...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp CCATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTCACAGAATCATTGCTCTCTTGCCACAGCCTGGCTaGACCTTCTCCGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PFLPPATNSPKIHRIIALLPQPG*TFSVVP
Trigger: GGGGACTACGGAGAAGGTGCAGCCAGGCTGTGGCAA...GAGAGCAATGATTCTGTGAATTTTTGGGGAATTTGTGGCAGGAGGGAGGAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378406.5
ENST00000421582.2
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTTGCTTGCCTCCTCGTaGAGAACCGCAGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPLLASS*RTAVSS
Trigger: AGATGAAACTGCGGTTCTCCACGAGGAGGCAAGCAA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTGCAGCAGCTCGTGGATaGTCCATAGCTTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPAAARG*SIASCS
Trigger: TGAACATGAAGCTATGGACCATCCACGAGCTGCTGC...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTCTTGCAGCAGCTCGTaGATGGTCCATAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPSCSSS*MVHSFM
Trigger: CATGAAGCTATGGACCATCCACGAGCTGCTGCAAGA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTCCCTTTGCCACAGCCTaGCTGCACCTTCTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPPFATA*LHLLRS
Trigger: ACTACGGAGAAGGTGCAGCCAGGCTGTGGCAAAGGG...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCGAGAAAAGGGATTTTTaGGCCCTGAACGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTEKRDF*ALNAGM
Trigger: CATGCCCGCGTTCAGGGCCCAAAAATCCCTTTTCTC...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGAGCTGTTGCTCTGACTaGAGTGGCTGCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLSCCSD*SGCCLL
Trigger: AAGCAAGCAGCAGCCACTGCAGTCAGAGCAACAGCT...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTAGGTTGTTCAGGTGCTaGTCTGTCTGGGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPRLFRC*SVWASC
Trigger: ACAGCTGGCCCAGACAGAGCAGCACCTGAACAACCT...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTATCAGGTTGTTCAGGTaGTGCTCTGTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPIRLFR*CSVWAS
Trigger: GCTGGCCCAGACAGAGCAGCACCTGAACAACCTGAT...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTATCCTTGTCCGGCTTaGTATCTTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQYPCPA*YLAAAR
Trigger: ACGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCTATCCTTGTCCGGCTTaGTATCTTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTYPCPA*YLAAAR
Trigger: ACGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATA...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGTGGTTATGTATCTTCTaGTGTCCCCTAAACTCCCCC +
Preference number: 4 (lower is better)
Translates to: NVPVSETLSPPPADSPPEWLCIF*CPLNSP
Trigger: GGGGGAGTTTAGGGGACAGCAGAAGATACATAACCA...CTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTTGCTTGCCTCCTCGTaGAGAACCGCAGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQLLASS*RTAVSS
Trigger: AGATGAAACTGCGGTTCTCCACGAGGAGGCAAGCAA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGAGCTGTTGTGTCAACTaGGCCAGCTGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLSCCVN*ASCCSD
Trigger: GTCAGAGCAACAGCTGGCCCAGTTGACACAACAGCT...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR CCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTCAGGAAGAGGTCTGCTaGCCTCTGGTTCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPQEEVC*PLVLKP
Trigger: AGGCTTCAGAACCAGAGGCCAGCAGACCTCTTCCTG...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378409.7
CDS-3UTR CCA 90 bp CCATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTCACAGAATCATTGCTCTCACGCGGGCATGCTGGTaGCCTCAGGAATACGAGGAA +
Preference number: 4 (lower is better)
Translates to: PFLPPATNSPKIHRIIALTRACW*PQEYEE
Trigger: TTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGT...GAGAGCAATGATTCTGTGAATTTTTGGGGAATTTGTGGCAGGAGGGAGGAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR TCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTGCCTTCACCTGGTTCTaGAGCCTCCATATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPAFTWF*SLHILV
Trigger: GACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGC...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGTTTCATCTTTCCCCTaGAAACACTTGTACAGCACA +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRVSSFP*KHLYST
Trigger: TGTGCTGTACAAGTGTTTGCAGGGGAAAGATGAAAC...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTAGCTGTTGTGTCAACTaGGCCAGCTGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPSCCVN*ASCCSD
Trigger: GTCAGAGCAACAGCTGGCCCAGTTGACACAACAGCT...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR CCA 90 bp CCATTCCTCCCTCCTGCCACAAATTCCCCAAAAATTCACAGAATCATTGCTCTCAGCTGTTGTGTCAACTaGGCCAGCTGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PFLPPATNSPKIHRIIALSCCVN*ASCCSG
Trigger: CCCAGAGCAACAGCTGGCCCAGTTGACACAACAGCT...GAGAGCAATGATTCTGTGAATTTTTGGGGAATTTGTGGCAGGAGGGAGGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR GCA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTGTTTCATCTTTCCCCTaGAAACACTTGTACAGCACA +
Preference number: 4 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPVSSFP*KHLYST
Trigger: TGTGCTGTACAAGTGTTTGCAGGGGAAAGATGAAAC...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR GCA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGTTTCATCTTTCCCCTaGAAACACTTGTACAGCACA +
Preference number: 4 (lower is better)
Translates to: RNVPVSETLSPPPADSPPVSSFP*KHLYST
Trigger: TGTGCTGTACAAGTGTTTGCAGGGGAAAGATGAAAC...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CCA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTTTGCTTGCCTCCTCGTaGAGAACCGCAGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPLLASS*RTAVSS
Trigger: AGATGAAACTGCGGTTCTCCACGAGGAGGCAAGCAA...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCTTGCTTGCCTCCTCGTaGAGAACCGCAGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVLLASS*RTAVSS
Trigger: AGATGAAACTGCGGTTCTCCACGAGGAGGCAAGCAA...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp CAGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTTCTCTGCTGTCACACTaGAAGGCAGCCTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: QEYEEKSWSSLYLLCCHTSLLSH*KAASFC
Trigger: ACAAAAAGAGGCTGCCTTCCAGTGTGACAGCAGAGA...AGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCTACGAGGAAAAGAGCTaGAGCTCCCTCTATCTTCTC +
Preference number: 4 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPYEEKS*SSLYLL
Trigger: GAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTA...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CCA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGAAAAGGGGGCAGAAGTaGTTATGTATCTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQKRGQK*LCIFCC
Trigger: ACAGCAGAAGATACATAACCACTTCTGCCCCCTTTT...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421582.2
CDS-3UTR GCA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCGTTTCATCTTTCCCCTaGAAACACTTGTACAGCACA +
Preference number: 4 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPVSSFP*KHLYST
Trigger: TGTGCTGTACAAGTGTTTGCAGGGGAAAGATGAAAC...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGGTTTCATCTTTCCCCTaGAAACACTTGTACAGCACA +
Preference number: 4 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLVSSFP*KHLYST
Trigger: TGTGCTGTACAAGTGTTTGCAGGGGAAAGATGAAAC...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR GCA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGACTTCTGTCTCAGTTTTaGTATGAGAAAAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRLLSQF*YEKRDF
Trigger: AAAATCCCTTTTCTCATAGCAAAACTGAGACAGAAG...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR GCA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTTCTGTCTCAGTTTTaGTATGAGAAAAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVLLSQF*YEKRDF
Trigger: AAAATCCCTTTTCTCATAGCAAAACTGAGACAGAAG...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS CCA 90 bp AGGCAGCGACCCGGCCCGGGTCCGCTCGCGTTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGTGGCTCCAGAGCCGGGGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RQRPGPGPLALILER*SPPGFRGSRAGVGC
Trigger: GCAGCCCACCCCGGCTCTGGAGCCACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGCGGACCCGGGCCGGGTCGCTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS GCA 90 bp CAGCGCAGACACAAGCAGCAGCCCCACCACACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCCACGGGTGGAGGGATCGGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: QRRHKQQPHHTQERN*ARHCRPTGGGIGRA
Trigger: CGCCCGCCCGATCCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGTGTGGTGGGGCTGCTGCTTGTGTCTGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS CCA 90 bp AGCCGGGGTGGGCTGCGTTCCCTGGGTGTGCCCGGAGGTCGGGATTaGCGCGGTCTCCTAGGACCCCGGACAGCGCAGACACAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SRGGLRSLGVPGGRD*RGLLGPRTAQTQAA
Trigger: TGCTGCTTGTGTCTGCGCTGTCCGGGGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGGCACACCCAGGGAACGCAGCCCACCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp CCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAGCCCGGAGGTCGGGATaGGCGCGGTCTCCTAGGACC +
Preference number: 5 (lower is better)
Translates to: PPPADSPPEPSPGSEASIARRSG*ARSPRT
Trigger: GGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGGC...TATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCACCGGGTCCGCTCGCGTaGATCCTTGAGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LHLQQTRLPSLHLVLKPPPGPLA*ILERWS
Trigger: CGACCACCGCTCAAGGATCAACGCGAGCGGACCCGG...TGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCAAACTGCGCCCGCCATaGCCGGCCCACGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFKLRPP*PAHGWR
Trigger: CCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTTT...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAACTGCGCCCGCCATaGCCGGCCCACGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: RDFWALNAGMLVASGIRGKLRPP*PAHGWR
Trigger: CCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTTT...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AAGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGGCCCGGAGGTCGGGATaGGCGCGGTCTCCTAGGACC +
Preference number: 5 (lower is better)
Translates to: KGFLGPERGHAGGLRNTRARRSG*ARSPRT
Trigger: GGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGGC...CCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCCGAAGCGGTCCGGCATaGGCCGGCCGCCCCAACGCG +
Preference number: 5 (lower is better)
Translates to: RNVPVSETLSPPPADSPPRSGPA*AGRPNA
Trigger: CGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTCG...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378407.7
CDS-3UTR CAA 90 bp GGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAAACTGCGCCCGCCATaGCCGGCCCACGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GMFQFQRLCLHLQQTRLPKLRPP*PAHGWR
Trigger: CCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTTT...CGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGCCCGGAGGTCGGGATaGGCGCGGTCTCCTAGGACC +
Preference number: 5 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRARRSG*ARSPRT
Trigger: GGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGGC...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGCCGGGTCCGCTCGCGTaGATCCTTGAGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: FWALNAGMLVASGIRGKEPGPLA*ILERWS
Trigger: CGACCACCGCTCAAGGATCAACGCGAGCGGACCCGG...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp CCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATAGTGGCTGCTGCTTGCTaGCCTCCTCGTGGAGAACCG +
Preference number: 5 (lower is better)
Translates to: PPPADSPPEPSPGSEASIVAAAC*PPRGEP
Trigger: CGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCAC...TATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTAAACTGCGCCCGCCATaGCCGGCCCACGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPKLRPP*PAHGWR
Trigger: CCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTTT...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTGCCCGGAGGTCGGGATaGGCGCGGTCTCCTAGGACC +
Preference number: 5 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPARRSG*ARSPRT
Trigger: GGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGGC...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATGTGGCTGCTGCTTGCTaGCCTCCTCGTGGAGAACCG +
Preference number: 5 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYVAAAC*PPRGEP
Trigger: CGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCAC...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp TCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 5 (lower is better)
Translates to: SPPPADSPPEPSPGSEASVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...GGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp TTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGTGTGACTGGGGCCCTTaGCCACAGCCTGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: FWALNAGMLVASGIRGKECDWGP*PQPGCT
Trigger: GGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACA...CTCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp CAGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTCGAAGCGGTCCGGCATaGGCCGGCCGCCCCAACGCG +
Preference number: 5 (lower is better)
Translates to: QEYEEKSWSSLYLLCCHTRSGPA*AGRPNA
Trigger: CGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTCG...AGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGGCCCGGAGGTCGGGATaGGCGCGGTCTCCTAGGACC +
Preference number: 5 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQARRSG*ARSPRT
Trigger: GGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGGC...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCCGGGTCCGCTCGCGTaGATCCTTGAGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPPGPLA*ILERWS
Trigger: CGACCACCGCTCAAGGATCAACGCGAGCGGACCCGG...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCCCGGGTCCGCTCGCGTaGATCCTTGAGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: RNVPVSETLSPPPADSPPPGPLA*ILERWS
Trigger: CGACCACCGCTCAAGGATCAACGCGAGCGGACCCGG...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTGTGTGGCTGCTGCTTGCTaGCCTCCTCGTGGAGAACCG +
Preference number: 5 (lower is better)
Translates to: QQTRLPSLHLVLKPPYPCVAAAC*PPRGEP
Trigger: CGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCAC...ACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGCAGTGGCTGCTGCTaGCTTGCCTCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFCSGCC*LASSWR
Trigger: TCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGCA...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGGGATTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGATGTCTGGGCCAGCTGTaGTGTCAACTGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RDFWALNAGMLVASGIRGCLGQL*CQLGQL
Trigger: CAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACA...TCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCGAAGCGGTCCGGCATaGGCCGGCCGCCCCAACGCG +
Preference number: 5 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVRSGPA*AGRPNA
Trigger: CGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTCG...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGGCCCGGAGGTCGGGATaGGCGCGGTCTCCTAGGACC +
Preference number: 5 (lower is better)
Translates to: RNTRKRAGAPSIFSAVTLARRSG*ARSPRT
Trigger: GGTCCTAGGAGACCGCGCCAATCCCGACCTCCGGGC...CAGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCCCGGGTCCGCTCGCGTaGATCCTTGAGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTPGPLA*ILERWS
Trigger: CGACCACCGCTCAAGGATCAACGCGAGCGGACCCGG...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGTGGCTGCTGCTTGCTaGCCTCCTCGTGGAGAACCG +
Preference number: 5 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRVAAAC*PPRGEP
Trigger: CGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCAC...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp TGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTGCAGTGGCTGCTGCTaGCTTGCCTCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: CSSFRDFVSTSSRLASRACSGCC*LASSWR
Trigger: TCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGCA...GGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp GTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTTGTCTGGGCCAGCTGTaGTGTCAACTGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VSETLSPPPADSPPEPSPCLGQL*CQLGQL
Trigger: CAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACA...AGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAATGTCTGGGCCAGCTGTaGTGTCAACTGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: TLSPPPADSPPEPSPGSECLGQL*CQLGQL
Trigger: CAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACA...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTGGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 5 (lower is better)
Translates to: PADSPPEPSPGSEASISLVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...CAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCTGTGACTGGGGCCCTTaGCCACAGCCTGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: RNVPVSETLSPPPADSPPCDWGP*PQPGCT
Trigger: GGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACA...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGTGTGACTGGGGCCCTTaGCCACAGCCTGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: NVPVSETLSPPPADSPPECDWGP*PQPGCT
Trigger: GGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACA...CTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCAAACTGCGCCCGCCATaGCCGGCCCACGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVKLRPP*PAHGWR
Trigger: CCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTTT...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTGTGGCTGCTGCTTGCTaGCCTCCTCGTGGAGAACCG +
Preference number: 5 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPVAAAC*PPRGEP
Trigger: CGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCAC...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGATGTCTGGGCCAGCTGTaGTGTCAACTGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRCLGQL*CQLGQL
Trigger: CAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACA...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTGTGACTGGGGCCCTTaGCCACAGCCTGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQCDWGP*PQPGCT
Trigger: GGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp GCTCTTCAAGAAGGCCCAGTTGTCCTTAGGCACCTAGTATGGGTGTGTACAACCTGTGACTGGGGCCCTTaGCCACAGCCTGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: ALQEGPVVLRHLVWVCTTCDWGP*PQPGCT
Trigger: GGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACA...GGTTGTACACACCCATACTAGGTGCCTAAGGACAACTGGGCCTTCTTGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCCGGGTCCGCTCGCGTaGATCCTTGAGCGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVPGPLA*ILERWS
Trigger: CGACCACCGCTCAAGGATCAACGCGAGCGGACCCGG...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp TTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCCCCTGCAAACACTaGTACAGCACAAAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: FRDFVSTSSRLASRAFTWFPCKH*YSTKAA
Trigger: CGCGGCTTTTGTGCTGTACAAGTGTTTGCAGGGGAA...CCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTTCCCCTGCAAACACTaGTACAGCACAAAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: RDFVSTSSRLASRAFTWFFPCKH*YSTKAA
Trigger: CGCGGCTTTTGTGCTGTACAAGTGTTTGCAGGGGAA...GAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTGCAGTGGCTGCTGCTaGCTTGCCTCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPCSGCC*LASSWR
Trigger: TCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGCA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGAGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 5 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp CAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTATATCCTTGTCCGGCTaGCTATCTTGCAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QRLCLHLQQTRLPSLHLVISLSG*LSCSSS
Trigger: CGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATAT...AACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATATATCCTTGTCCGGCTaGCTATCTTGCAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: HLQQTRLPSLHLVLKPPYISLSG*LSCSSS
Trigger: CGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATAT...ATATGGAGGCTTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCTGTGACTGGGGCCCTTaGCCACAGCCTGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPCDWGP*PQPGCT
Trigger: GGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACA...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp ACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCGAGCCTTCACCTGGTTCTGAATTCCCCTGCAAACACTaGTACAGCACAAAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: TLSPPPADSPPEPSPGSEFPCKH*YSTKAA
Trigger: CGCGGCTTTTGTGCTGTACAAGTGTTTGCAGGGGAA...TTCAGAACCAGGTGAAGGCTCGGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCGTGGCTGCTGCTTGCTaGCCTCCTCGTGGAGAACCG +
Preference number: 5 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPVAAAC*PPRGEP
Trigger: CGGTTCTCCACGAGGAGGCAAGCAAGCAGCAGCCAC...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGTGTCTGGGCCAGCTGTaGTGTCAACTGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQCLGQL*CQLGQL
Trigger: CAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACA...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp TTTTTGGGCCCTGAACGCGGGCATGCTGGTGGCCTCAGGAATACGAGGAAAAGATTCCCCTGCAAACACTaGTACAGCACAAAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: FLGPERGHAGGLRNTRKRFPCKH*YSTKAA
Trigger: CGCGGCTTTTGTGCTGTACAAGTGTTTGCAGGGGAA...TCTTTTCCTCGTATTCCTGAGGCCACCAGCATGCCCGCGTTCAGGGCCCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCTGCAGTGGCTGCTGCTaGCTTGCCTCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPCSGCC*LASSWR
Trigger: TCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGCA...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 5 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CCCAGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTTTCCCCTGCAAACACTaGTACAGCACAAAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: PRPDCHQSPPRPPLNRSPFPCKH*YSTKAA
Trigger: CGCGGCTTTTGTGCTGTACAAGTGTTTGCAGGGGAA...AGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCTGCAGTGGCTGCTGCTaGCTTGCCTCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVCSGCC*LASSWR
Trigger: TCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGCA...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTTGCAGTGGCTGCTGCTaGCTTGCCTCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPCSGCC*LASSWR
Trigger: TCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGCA...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCTGTCTGGGCCAGCTGTaGTGTCAACTGGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RQPLFVLIRTALQEGPVVCLGQL*CQLGQL
Trigger: CAGCTGGCCCAGTTGACACAACAGCTGGCCCAGACA...GACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp CAGGAATACGAGGAAAAGAGCTGGAGCTCCCTCTATCTTCTCTGCTGTCACACTGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 5 (lower is better)
Translates to: QEYEEKSWSSLYLLCCHTVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...AGTGTGACAGCAGAGAAGATAGAGGGAGCTCCAGCTCTTTTCCTCGTATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGAATGTTCCAGTTTCAGAGACTTTGTCTCCACCTCCAGCAGACTCGCCTCCCATATCCTTGTCCGGCTaGCTATCTTGCAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: RNVPVSETLSPPPADSPPISLSG*LSCSSS
Trigger: CGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATAT...GGGAGGCGAGTCTGCTGGAGGTGGAGACAAAGTCTCTGAAACTGGAACATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp GCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCAGTTGTCCTGTCCGGCTTGCTATCTaGCAGCAGCTCGTGGATGGT +
Preference number: 5 (lower is better)
Translates to: AASFCPNKDSSSRRPSCPVRLAI*QQLVDG
Trigger: ACCATCCACGAGCTGCTGCAAGATAGCAAGCCGGAC...AGGACAACTGGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS-3UTR CAA 90 bp AGGCCTGACTGTCACCAATCTCCTCCTCGTCCTCCTTTAAACAGAAGTCCTCAGATATCCTTGTCCGGCTaGCTATCTTGCAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: RPDCHQSPPRPPLNRSPQISLSG*LSCSSS
Trigger: CGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATAT...CTGAGGACTTCTGTTTAAAGGAGGACGAGGAGGAGATTGGTGACAGTCAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000421582.2
CDS-3UTR CAA 90 bp CACTGGAAGGCAGCCTCTTTTTGTCCTAATAAGGACAGCTCTTCAAGAAGGCCCATATCCTTGTCCGGCTaGCTATCTTGCAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: HWKAASFCPNKDSSSRRPISLSG*LSCSSS
Trigger: CGAGCTGCTGCAAGATAGCAAGCCGGACAAGGATAT...GGGCCTTCTTGAAGAGCTGTCCTTATTAGGACAAAAAGAGGCTGCCTTCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS CAA 72 bp GAGGGATCGGGCGGGCGGTGCCGAAGCGGTCCGGCATaGGCCGGCCGCCCCAACGCGCACGCGCACGCGAGC +
Preference number: 6 (lower is better)
Translates to: EGSGGRCRSGPA*AGRPNAHAHAS
Trigger: GCTCGCGTGCGCGTGCGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTCGGCACCGCCCGCCCGATCCCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378409.7
ENST00000426546.7
CDS CCA 72 bp AGGGATCGGGCGGGCGGTGCCGAAGCGGTCCGGCATTaGCCGGCCGCCCCAACGCGCACGCGCACGCGAGCA +
Preference number: 6 (lower is better)
Translates to: RDRAGGAEAVRH*PAAPTRTRTRA
Trigger: TGCTCGCGTGCGCGTGCGCGTTGGGGCGGCCGGCCAATGCCGGACCGCTTCGGCACCGCCCGCCCGATCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378409.7
CDS CCA 72 bp GGTCGCCGCCGGGGTTCCGTGGCTCCAGAGCCGGGGTaGGCTGCGTTCCCTGGGTGTGCCCGGAGGTCGGGA +
Preference number: 6 (lower is better)
Translates to: GRRRGSVAPEPG*AAFPGCARRSG
Trigger: TCCCGACCTCCGGGCACACCCAGGGAACGCAGCCCACCCCGGCTCTGGAGCCACGGAACCCCGGCGGCGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS CCA 72 bp CCCGGCCCGGGTCCGCTCGCGTTGATCCTTGAGCGGTaGTCGCCGCCGGGGTTCCGTGGCTCCAGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: PGPGPLALILER*SPPGFRGSRAG
Trigger: CCCGGCTCTGGAGCCACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGCGGACCCGGGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS TCA 72 bp GCAGCGACCCGGCCCGGGTCCGCTCGCGTTGATCCTTaGGCGGTGGTCGCCGCCGGGGTTCCGTGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: AATRPGSARVDP*AVVAAGVPWLQ
Trigger: CTGGAGCCACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGCGGACCCGGGCCGGGTCGCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS TCA 72 bp CCCAGAGGCAGCGACCCGGCCCGGGTCCGCTCGCGTTaGTCCTTGAGCGGTGGTCGCCGCCGGGGTTCCGTG +
Preference number: 6 (lower is better)
Translates to: PRGSDPARVRSR*SLSGGRRRGSV
Trigger: CACGGAACCCCGGCGGCGACCACCGCTCAAGGATCAACGCGAGCGGACCCGGGCCGGGTCGCTGCCTCTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS GCA 72 bp CACAAGCAGCAGCCCCACCACACCCAAGAGCGAAACTaGGCCCGCCATTGCCGGCCCACGGGTGGAGGGATC +
Preference number: 6 (lower is better)
Translates to: HKQQPHHTQERN*ARHCRPTGGGI
Trigger: GATCCCTCCACCCGTGGGCCGGCAATGGCGGGCGCAGTTTCGCTCTTGGGTGTGGTGGGGCTGCTGCTTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327351.6
ENST00000378406.5
ENST00000378407.7
ENST00000378409.7
ENST00000421582.2
ENST00000426546.7
CDS GCA 72 bp CCGACCCAGCACAGACTTCTGCTAAACCCACCTGACTaGAGTGGCTGCTGCTTGCTTGCCTCCTCGTGGAGA +
Preference number: 6 (lower is better)
Translates to: PTQHRLLLNPPD*SGCCLLASSWR
Trigger: TCTCCACGAGGAGGCAAGCAAGCAGCAGCCACTGCAGTCAGGTGGGTTTAGCAGAAGTCTGTGCTGGGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421582.2