RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC102B (Homo sapiens)

Ensembl gene IDs: ENSG00000150636

Ensembl transcript IDs: ENST00000360242.9, ENST00000577772.5, ENST00000577800.1, ENST00000578970.5, ENST00000580292.2, ENST00000581520.1, ENST00000582077.5, ENST00000582371.5, ENST00000584156.5, ENST00000584775.5

Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTATTCCCACTACTCAGAGGGAAACCACAGCTTAATTTTGGCCTaGTTTCTACCTAGATGCTACTTTGCAATGCTGATGCCTTTCCAT +
Preference number: 1 (lower is better)
Translates to: LYSHYSEGNHSLILA*FLPRCYFAMLMPFH
Trigger: ATGGAAAGGCATCAGCATTGCAAAGTAGCATCTAGGTAGAAATCAGGCCAAAATTAAGCTGTGGTTTCCCTCTGAGTAGTGGGAATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360242.9
3UTR-3UTR GCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTTTTGTTAATACAACCTaGCATCCCCACCACATAGAC +
Preference number: 2 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITFVNTT*HPHHID
Trigger: GTCTATGTGGTGGGGATGGCAGGTTGTATTAACAAA...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
3UTR-3UTR CCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTACCCAGCGTCTTGTATaGTTTTCAACTTACTTTTTC +
Preference number: 2 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITTQRLV*FSTYFF
Trigger: GAAAAAGTAAGTTGAAAACCATACAAGACGCTGGGT...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360242.9
3UTR-3UTR GCA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCTTAGTTTCTCAGCGATaGTTACAGCCTGTCTTAGAT +
Preference number: 2 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVLVSQR*LQPVLD
Trigger: ATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAA...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
3UTR TCA 72 bp CACTACTCAGAGGGAAACCACAGCTTAATTTTGGCCTaGTTTCTACCTAGATGCTACTTTGCAATGCTGATG +
Preference number: 3 (lower is better)
Translates to: HYSEGNHSLILA*FLPRCYFAMLM
Trigger: CATCAGCATTGCAAAGTAGCATCTAGGTAGAAATCAGGCCAAAATTAAGCTGTGGTTTCCCTCTGAGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTGAGCAGCTCTGGCCTTaGCTTCTTCAAGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITEQLWP*LLQAPA
Trigger: TGCGGGAGCTTGAAGAAGTCAAGGCCAGAGCTGCTC...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGGAGCAGCTCTGGCCTTaGCTTCTTCAAGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVEQLWP*LLQAPA
Trigger: TGCGGGAGCTTGAAGAAGTCAAGGCCAGAGCTGCTC...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR GCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAACTGGGCTTGCTGGGCTaGTCCAGTGTCTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKLGLLG*SSVSVA
Trigger: TGCAACTGAGACACTGGAGCAGCCCAGCAAGCCCAG...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGCCGACCACCACCGCATaGTCTTTTCCATCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVPTTTA*SFPSEQ
Trigger: CTGCTCAGATGGAAAAGACCATGCGGTGGTGGTCGG...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTATGGTCTTTTCCATCTaGGCAGCTCTGGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITMVFSI*AALALT
Trigger: AGTCAAGGCCAGAGCTGCTCAGATGGAAAAGACCAT...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCCCGACCACCACCGCATaGTCTTTTCCATCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVPTTTA*SFPSEQ
Trigger: CTGCTCAGATGGAAAAGACCATGCGGTGGTGGTCGG...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGATGGTCTTTTCCATCTaGGCAGCTCTGGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVMVFSI*AALALT
Trigger: AGTCAAGGCCAGAGCTGCTCAGATGGAAAAGACCAT...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTCTAATGCCTCCTTCTaGGGTGGCAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVSNASF*GGKLCF
Trigger: GAAACAGAGTTTGCCACCTCAGAAGGAGGCATTAGA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CCA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCATTTTTAAGACCCTCTaGGCTTGCTGGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVIFKTL*ACWAAP
Trigger: TGGAGCAGCCCAGCAAGCCCAGAGGGTCTTAAAAAT...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTTCTCTAGTTTTATTCTaGGTTGTCTTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITSLVLF*VVFLPP
Trigger: GGGAGGAAGGAAGACAACTCAGAATAAAACTAGAGA...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATCTAATGCCTCCTTCTaGGGTGGCAAACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKSNASF*GGKLCF
Trigger: GAAACAGAGTTTGCCACCTCAGAAGGAGGCATTAGA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATGGAGCTTACGGATCTaGTTCAGGGAATCATCAAGC +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKWSLRI*FRESSS
Trigger: GCTTGATGATTCCCTGAATCAGATCCGTAAGCTCCA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGACTTCTGCTTCATTTTaGTCCACTCGGTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVTSASF*STRLFA
Trigger: TGCAAACAACCGAGTGGATCAAAATGAAGCAGAAGT...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTAGTTTTGCAAGTGCCTaGGTTCAGTCTCTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITSFASA*VQSLSF
Trigger: AAAACTTAGAGACTGAACTCAGGCACTTGCAAAACT...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTAGCTTAATTTTGGCCTaGTTTCTACCTAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITSLILA*FLPRCY
Trigger: GTAGCATCTAGGTAGAAATCAGGCCAAAATTAAGCT...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAACTCCAGTGTCTCAGTTaGAGCCACATGTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKLQCLS*SHMCKQ
Trigger: TTGTTTACACATGTGGCTGCAACTGAGACACTGGAG...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGCAAAGGCAGATTTATTaGTTTCAGTCTCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVQRQIY*FQSQPS
Trigger: ACTGGGCTGAGACTGAAAGCAATAAATCTGCCTTTG...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR GCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTTCTCTCTCCAGTCCCTaGTTTTCTCTTTCAAGTATT +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITSLSSP*FSLSSI
Trigger: AATACTTGAAAGAGAAAAGCAGGGACTGGAGAGAGA...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGATCCACTCGGTTGTTTaGATGAGTCAGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVIHSVV*MSQFCN
Trigger: ATTGCAGAACTGACTCATGCAAACAACCGAGTGGAT...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTGGAAGCTTCAGATCCTaGGTAACTTTAGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITGSFRS*VTLASN
Trigger: ATTAGAAGCTAAAGTTACCCAGGATCTGAAGCTTCC...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGCAACACCATCTAGATTaGGCTTCATCTCCTCACTTA +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVQHHLD*ASSPHL
Trigger: TAAGTGAGGAGATGAAGCCCAATCTAGATGGTGTTG...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTTTCCTTTATATTGCCTaGCAGTTCTTGCATTTCATC +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITFLYIA*QFLHFI
Trigger: GATGAAATGCAAGAACTGTCAGGCAATATAAAGGAA...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGACTCGGTTGTTTGCATaGGTCAGTTCTGCAATATTT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVTRLFA*VSSAIF
Trigger: AAATATTGCAGAACTGACTCATGCAAACAACCGAGT...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCACTTCTGCTTCATTTTaGTCCACTCGGTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVTSASF*STRLFA
Trigger: TGCAAACAACCGAGTGGATCAAAATGAAGCAGAAGT...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAACAAAGGCAGATTTATTaGTTTCAGTCTCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKQRQIY*FQSQPS
Trigger: ACTGGGCTGAGACTGAAAGCAATAAATCTGCCTTTG...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCGAGGTATTTTCAGCTTaGAATCTCTCTAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVEVFSA*NLSSSA
Trigger: AGCAGAGCTAGAGAGATTGCAAGCTGAAAATACCTC...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTCTCTCTCCAGTCCCTaGTTTTCTCTTTCAAGTATT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVSLSSP*FSLSSI
Trigger: AATACTTGAAAGAGAAAAGCAGGGACTGGAGAGAGA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR GCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTGCATGAGTCAGTTCTaGAATATTTGCCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVCMSQF*NICLVL
Trigger: CAATACCAGGCAAATATTGCAGAACTGACTCATGCA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR GCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAAATCCACTCGGTTGTTTaGATGAGTCAGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKIHSVV*MSQFCN
Trigger: ATTGCAGAACTGACTCATGCAAACAACCGAGTGGAT...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp AAAGTCCTTTTAGTTTCTCAGCGATGCTTACAGCCTGTCTTAGATTCAATCACTAAAAATTACCAGTTTTaGAAGTGCCTGAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: KVLLVSQRCLQPVLDSITKNYQF*KCLSSV
Trigger: GACTGAACTCAGGCACTTGCAAAACTGGTAATTTTT...AGTGATTGAATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAAAAGGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATTTGTTAATACAACCTaGCATCCCCACCACATAGAC +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKFVNTT*HPHHID
Trigger: GTCTATGTGGTGGGGATGGCAGGTTGTATTAACAAA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGGATGATTGTTGCATCTaGAAGATCTGTGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVDDCCI*KICVSS
Trigger: TGAGGAAACACAGATCTTCCAGATGCAACAATCATC...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGGGAAGCTTCAGATCCTaGGTAACTTTAGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVGSFRS*VTLASN
Trigger: ATTAGAAGCTAAAGTTACCCAGGATCTGAAGCTTCC...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAACAACACCATCTAGATTaGGCTTCATCTCCTCACTTA +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKQHHLD*ASSPHL
Trigger: TAAGTGAGGAGATGAAGCCCAATCTAGATGGTGTTG...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGAGACTCATGCATTTGTaGACTCAATTGAAATTGGTC +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVRLMHL*TQLKLV
Trigger: GACCAATTTCAATTGAGTTCACAAATGCATGAGTCT...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGATGCACCTGCAAAGCTaGAATTTCAGTTACTTCATT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVMHLQS*NFSYFI
Trigger: AATGAAGTAACTGAAATTTCAGCTTTGCAGGTGCAT...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTTCCTTTATATTGCCTaGCAGTTCTTGCATTTCATC +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVFLYIA*QFLHFI
Trigger: GATGAAATGCAAGAACTGTCAGGCAATATAAAGGAA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGCAATTTGTGACATCTTaGAATCAGGACTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVQFVTS*NQDFES
Trigger: ACTCTCAAAGTCCTGATTTCAAGATGTCACAAATTG...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTTGCAGATCAATTTGTaGCATCTTGAAATCAGGACT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVLQINL*HLEIRT
Trigger: AGTCCTGATTTCAAGATGTCACAAATTGATCTGCAA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCACTCGGTTGTTTGCATaGGTCAGTTCTGCAATATTT +
Preference number: 4 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVTRLFA*VSSAIF
Trigger: AAATATTGCAGAACTGACTCATGCAAACAACCGAGT...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATGCATGAGTCAGTTCTaGAATATTTGCCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKCMSQF*NICLVL
Trigger: CAATACCAGGCAAATATTGCAGAACTGACTCATGCA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR GCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATTAGTTTCTCAGCGATaGTTACAGCCTGTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKLVSQR*LQPVLD
Trigger: ATCTAAGACAGGCTGTAAGCATCGCTGAGAAACTAA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAAGATGATTGTTGCATCTaGAAGATCTGTGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKDDCCI*KICVSS
Trigger: TGAGGAAACACAGATCTTCCAGATGCAACAATCATC...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTCCATTTCTTTCACCTaGATCTTCAGCCTTCTATTT +
Preference number: 4 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVSISFT*IFSLLF
Trigger: AAATAGAAGGCTGAAGATCCAGGTGAAAGAAATGGA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR TCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAAAGACTCATGCATTTGTaGACTCAATTGAAATTGGTC +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKRLMHL*TQLKLV
Trigger: GACCAATTTCAATTGAGTTCACAAATGCATGAGTCT...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAAATGCACCTGCAAAGCTaGAATTTCAGTTACTTCATT +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKMHLQS*NFSYFI
Trigger: AATGAAGTAACTGAAATTTCAGCTTTGCAGGTGCAT...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCCAATTTGTGACATCTTaGAATCAGGACTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVQFVTS*NQDFES
Trigger: ACTCTCAAAGTCCTGATTTCAAGATGTCACAAATTG...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR TCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATTGCAGATCAATTTGTaGCATCTTGAAATCAGGACT +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKLQINL*HLEIRT
Trigger: AGTCCTGATTTCAAGATGTCACAAATTGATCTGCAA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATCCATTTCTTTCACCTaGATCTTCAGCCTTCTATTT +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKSISFT*IFSLLF
Trigger: AAATAGAAGGCTGAAGATCCAGGTGAAAGAAATGGA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CCA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAAACCCAGCGTCTTGTATaGTTTTCAACTTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKTQRLV*FSTYFF
Trigger: GAAAAAGTAAGTTGAAAACCATACAAGACGCTGGGT...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS TCA 90 bp AGCATAACTTTCACCGGTATTCACCTTCCCGGAAACGCGCCCCAGTaGACCAGCACCGTTTTCCCTAGTAAAGCCCTTAAGCAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: SITFTGIHLPGNAPQ*TSTVFPSKALKQGS
Trigger: GGAACCCTGCTTAAGGGCTTTACTAGGGAAAACGGTGCTGGTTCACTGGGGCGCGTTTCCGGGAAGGTGAATACCGGTGAAAGTTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578970.5
ENST00000582077.5
CDS TCA 90 bp AGCTCAGCAATCCGCAGTCTTAATGCGCGCCTCTTTCCAGGAATTTaGTCCAGCATCAAAACCCACAGGTGCACTCACCACACGGGAGTA +
Preference number: 5 (lower is better)
Translates to: SSAIRSLNARLFPGI*SSIKTHRCTHHTGV
Trigger: TACTCCCGTGTGGTGAGTGCACCTGTGGGTTTTGATGCTGGATCAAATTCCTGGAAAGAGGCGCGCATTAAGACTGCGGATTGCTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582077.5
CDS TCA 90 bp ATCAAAACCCACAGGTGCACTCACCACACGGGAGTAACAAGTAAATaGTGTGCCAGTATTCAACCTGCAAGTGCGTCGTCAGAGCCTACC +
Preference number: 5 (lower is better)
Translates to: IKTHRCTHHTGVTSK*CASIQPASASSEPT
Trigger: GGTAGGCTCTGACGACGCACTTGCAGGTTGAATACTGGCACATCATTTACTTGTTACTCCCGTGTGGTGAGTGCACCTGTGGGTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582077.5
CDS GCA 90 bp GAGGCAGGTGCCACCATGTCGCCGCGTGACTTAATTGATGATTGTTaGATCTGGAAGATCTGTGTTTCCTCAATTAATCGATGTATGGAA +
Preference number: 5 (lower is better)
Translates to: EAGATMSPRDLIDDC*IWKICVSSINRCME
Trigger: TTCCATACATCGATTAATTGAGGAAACACAGATCTTCCAGATGCAACAATCATCAATTAAGTCACGCGGCGACATGGTGGCACCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000578970.5
ENST00000581520.1
ENST00000582371.5
ENST00000584156.5
ENST00000584775.5
CDS CCA 90 bp CTTCAAGCTCCCGCAGGCGAAGTTCTTCACAAATATCCCATTTGTTaGTGTTATATGAGTGAGCACAGAAATTGTGAGCAGCATGAGATT +
Preference number: 5 (lower is better)
Translates to: LQAPAGEVLHKYPIC*CYMSEHRNCEQHEI
Trigger: AATCTCATGCTGCTCACAATTTCTGTGCTCACTCATATAACACCAACAAATGGGATATTTGTGAAGAACTTCGCCTGCGGGAGCTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000578970.5
ENST00000581520.1
ENST00000582371.5
ENST00000584156.5
ENST00000584775.5
CDS TCA 90 bp GGAAGCTTCAGATCCTGGGTAACTTTAGCTTCTAATGCCTCCTTCTaGGGTGGCAAACTCTGTTTCTTTTTCAGTGTACTCAATTCTTTC +
Preference number: 5 (lower is better)
Translates to: GSFRSWVTLASNASF*GGKLCFFFSVLNSF
Trigger: GAAAGAATTGAGTACACTGAAAAAGAAACAGAGTTTGCCACCTCAGAAGGAGGCATTAGAAGCTAAAGTTACCCAGGATCTGAAGCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000584156.5
ENST00000584775.5
CDS CCA 90 bp GGTGCCACCATGTCGCCGCGTGACTTAATTGATGATTGTTGCATCTaGAAGATCTGTGTTTCCTCAATTAATCGATGTATGGAATCTAAA +
Preference number: 5 (lower is better)
Translates to: GATMSPRDLIDDCCI*KICVSSINRCMESK
Trigger: TTTAGATTCCATACATCGATTAATTGAGGAAACACAGATCTTCCAGATGCAACAATCATCAATTAAGTCACGCGGCGACATGGTGGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000578970.5
ENST00000581520.1
ENST00000582371.5
ENST00000584156.5
ENST00000584775.5
CDS-3UTR CAA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGGATCCACTCGGTTGTTaGCATGAGTCAGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVDPLGC*HESVLQ
Trigger: TTGCAGAACTGACTCATGCAAACAACCGAGTGGATC...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CAA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTCAACACCATCTAGATaGGGCTTCATCTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVSTPSR*GFISSL
Trigger: AAGTGAGGAGATGAAGCCCAATCTAGATGGTGTTGA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CAA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAAGATCCACTCGGTTGTTaGCATGAGTCAGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKDPLGC*HESVLQ
Trigger: TTGCAGAACTGACTCATGCAAACAACCGAGTGGATC...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CAA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCTCAACACCATCTAGATaGGGCTTCATCTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVSTPSR*GFISSL
Trigger: AAGTGAGGAGATGAAGCCCAATCTAGATGGTGTTGA...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CAA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCTCAAGTATTTCCCTCTaGTCCCACTCCGAGGTATTT +
Preference number: 5 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVSSISL*SHSEVF
Trigger: AAATACCTCGGAGTGGGACAAGAGGGAAATACTTGA...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CAA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTACTTCTGCTTCATTTaGATCCACTCGGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVYFCFI*IHSVVC
Trigger: GCAAACAACCGAGTGGATCAAAATGAAGCAGAAGTA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS TCA 90 bp TTTACCAAATACTCTCTGATAGACTCATGCATTTGTGAACTCAATTaGAATTGGTCTGTATGTTCACAGGATTCTTCTACGAAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: FTKYSLIDSCICELN*NWSVCSQDSSTKPG
Trigger: TCCTGGCTTCGTAGAAGAATCCTGTGAACATACAGACCAATTTCAATTGAGTTCACAAATGCATGAGTCTATCAGAGAGTATTTGGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000584156.5
ENST00000584775.5
CDS TCA 90 bp CAGCACGTGTTCACTCATAAAGTAGTACCTCATCTTCTTTTTGATTaGGTCCCTGCTTTAGTTCTTCCACTCGTAATCTTAGTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: QHVFTHKVVPHLLFD*VPALVLPLVILVSL
Trigger: TAAAGAAACTAAGATTACGAGTGGAAGAACTAAAGCAGGGACTCAATCAAAAAGAAGATGAGGTACTACTTTATGAGTGAACACGTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CAA 90 bp ATGCTGATGCCTTTCCATGATTTTACTGTAGAAATGTCTATCCAGATAAAAGTCTACTTCTGCTTCATTTaGATCCACTCGGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: MLMPFHDFTVEMSIQIKVYFCFI*IHSVVC
Trigger: GCAAACAACCGAGTGGATCAAAATGAAGCAGAAGTA...GACTTTTATCTGGATAGACATTTCTACAGTAAAATCATGGAAAGGCATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CAA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGGATTCTTCCTTTATATaGCCTGACAGTTCTTGCATT +
Preference number: 5 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVDSSFI*PDSSCI
Trigger: AATGCAAGAACTGTCAGGCAATATAAAGGAAGAATC...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CAA 90 bp GAGACAATCTTTAGATATGCTCTAAAATACTATTTAGAAGCTGTCCAGCACGTGTCAGTTCTGCAATATTaGCCTGGTATTGTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: ETIFRYALKYYLEAVQHVSVLQY*PGIVCL
Trigger: TAAACAGACAATACCAGGCAAATATTGCAGAACTGA...CACGTGCTGGACAGCTTCTAAATAGTATTTTAGAGCATATCTAAAGATTGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS-3UTR CAA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAAGATTCTTCCTTTATATaGCCTGACAGTTCTTGCATT +
Preference number: 5 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKDSSFI*PDSSCI
Trigger: AATGCAAGAACTGTCAGGCAATATAAAGGAAGAATC...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS-3UTR CAA 90 bp TGCCATCCCCACCACATAGACAACACGTACATAAAAGTTTACCAATTATTTAAATCAGTTCTGCAATATTaGCCTGGTATTGTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: CHPHHIDNTYIKVYQLFKSVLQY*PGIVCL
Trigger: TAAACAGACAATACCAGGCAAATATTGCAGAACTGA...TTTAAATAATTGGTAAACTTTTATGTACGTGTTGTCTATGTGGTGGGGATGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS TCA 72 bp ACCGCATGGTCTTTTCCATCTGAGCAGCTCTGGCCTTaGCTTCTTCAAGCTCCCGCAGGCGAAGTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: TAWSFPSEQLWP*LLQAPAGEVLH
Trigger: GTGAAGAACTTCGCCTGCGGGAGCTTGAAGAAGTCAAGGCCAGAGCTGCTCAGATGGAAAAGACCATGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000581520.1
ENST00000582371.5
ENST00000584156.5
ENST00000584775.5
CDS TCA 72 bp TTCACCGGTATTCACCTTCCCGGAAACGCGCCCCAGTaGACCAGCACCGTTTTCCCTAGTAAAGCCCTTAAG +
Preference number: 6 (lower is better)
Translates to: FTGIHLPGNAPQ*TSTVFPSKALK
Trigger: CTTAAGGGCTTTACTAGGGAAAACGGTGCTGGTTCACTGGGGCGCGTTTCCGGGAAGGTGAATACCGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578970.5
ENST00000582077.5
CDS TCA 72 bp ATCCGCAGTCTTAATGCGCGCCTCTTTCCAGGAATTTaGTCCAGCATCAAAACCCACAGGTGCACTCACCAC +
Preference number: 6 (lower is better)
Translates to: IRSLNARLFPGI*SSIKTHRCTHH
Trigger: GTGGTGAGTGCACCTGTGGGTTTTGATGCTGGATCAAATTCCTGGAAAGAGGCGCGCATTAAGACTGCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582077.5
CDS TCA 72 bp CAGACTCTGCGTAGGCATCAGAGTGAGATTAGACAGTaGGAATTTGCTCCAAGGAGCACCCATACCTGGTTT +
Preference number: 6 (lower is better)
Translates to: QTLRRHQSEIRQ*EFAPRSTHTWF
Trigger: AAACCAGGTATGGGTGCTCCTTGGAGCAAATTCTCACTGTCTAATCTCACTCTGATGCCTACGCAGAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577800.1
CDS CAA 90 bp AGGCTGCACATAAAGGAGTCAGCAGGTGTGGTATCTGATAAGGGTTaGCTCTCTGCTTCCAGGATGGTACCTTCTTGTTGTGTTTTCACA +
Preference number: 6 (lower is better)
Translates to: RLHIKESAGVVSDKG*LSASRMVPSCCVFT
Trigger: TGTGAAAACACAACAAGAAGGTACCATCCTGGAAGCAGAGAGCAAACCCTTATCAGATACCACACCTGCTGACTCCTTTATGTGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582077.5
CDS CAA 72 bp GGGTTTGCTCTCTGCTTCCAGGATGGTACCTTCTTGTaGTGTTTTCACATGGCTCAGTTGTTCCAACCACAT +
Preference number: 6 (lower is better)
Translates to: GFALCFQDGTFL*CFHMAQLFQPH
Trigger: ATGTGGTTGGAACAACTGAGCCATGTGAAAACACAACAAGAAGGTACCATCCTGGAAGCAGAGAGCAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582077.5
CDS TCA 72 bp CAAAAGGAAATATCCAAATGTGGAGGCGTGTACGAGTaGAGACAGACTCTGCGTAGGCATCAGAGTGAGATT +
Preference number: 6 (lower is better)
Translates to: QKEISKCGGVYE*RQTLRRHQSEI
Trigger: AATCTCACTCTGATGCCTACGCAGAGTCTGTCTTCACTCGTACACGCCTCCACATTTGGATATTTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577800.1
CDS CCA 72 bp AAATTCATATTTATTTTTAAGACCCTCTGGGCTTGCTaGGCTGCTCCAGTGTCTCAGTTGCAGCCACATGTG +
Preference number: 6 (lower is better)
Translates to: KFIFIFKTLWAC*AAPVSQLQPHV
Trigger: CACATGTGGCTGCAACTGAGACACTGGAGCAGCCCAGCAAGCCCAGAGGGTCTTAAAAATAAATATGAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360242.9
CDS CAA 72 bp ATAAAGGAGTCAGCAGGTGTGGTATCTGATAAGGGTTaGCTCTCTGCTTCCAGGATGGTACCTTCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: IKESAGVVSDKG*LSASRMVPSCC
Trigger: ACAACAAGAAGGTACCATCCTGGAAGCAGAGAGCAAACCCTTATCAGATACCACACCTGCTGACTCCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582077.5
CDS GCA 72 bp ATTTCCCTCTTGTCCCACTCCGAGGTATTTTCAGCTTaGAATCTCTCTAGCTCTGCTCTTAACTCACAAATC +
Preference number: 6 (lower is better)
Translates to: ISLLSHSEVFSA*NLSSSALNSQI
Trigger: GATTTGTGAGTTAAGAGCAGAGCTAGAGAGATTGCAAGCTGAAAATACCTCGGAGTGGGACAAGAGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000577800.1
ENST00000584156.5
CDS CCA 72 bp TGGTATCTGATAAGGGTTTGCTCTCTGCTTCCAGGATaGTACCTTCTTGTTGTGTTTTCACATGGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: WYLIRVCSLLPG*YLLVVFSHGSV
Trigger: AACTGAGCCATGTGAAAACACAACAAGAAGGTACCATCCTGGAAGCAGAGAGCAAACCCTTATCAGATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582077.5
CDS TCA 72 bp AGATCCTGGGTAACTTTAGCTTCTAATGCCTCCTTCTaGGGTGGCAAACTCTGTTTCTTTTTCAGTGTACTC +
Preference number: 6 (lower is better)
Translates to: RSWVTLASNASF*GGKLCFFFSVL
Trigger: GAGTACACTGAAAAAGAAACAGAGTTTGCCACCTCAGAAGGAGGCATTAGAAGCTAAAGTTACCCAGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000584156.5
ENST00000584775.5
CDS GCA 72 bp TTGTACTGTCTACAATGTTCAGCCACCACTACTGTCTaGGTATCCTTGTTTCAGAAGACTCATACCACTTCT +
Preference number: 6 (lower is better)
Translates to: LYCLQCSATTTV*VSLFQKTHTTS
Trigger: AGAAGTGGTATGAGTCTTCTGAAACAAGGATACGCAGACAGTAGTGGTGGCTGAACATTGTAGACAGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580292.2
CDS CCA 72 bp ACGTACCAATGGCTCCAGCTTCTAACACCATTACATTaGGAGTTAGGATTTCAGCATAGGAATTTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: TYQWLQLLTPLH*ELGFQHRNLRR
Trigger: TCTCCTCAAATTCCTATGCTGAAATCCTAACTCCCAATGTAATGGTGTTAGAAGCTGGAGCCATTGGTACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580292.2
CDS GCA 72 bp CTTTACTTCTGCTTCATTTTGATCCACTCGGTTGTTTaGATGAGTCAGTTCTGCAATATTTGCCTGGTATTG +
Preference number: 6 (lower is better)
Translates to: LYFCFILIHSVV*MSQFCNICLVL
Trigger: CAATACCAGGCAAATATTGCAGAACTGACTCATGCAAACAACCGAGTGGATCAAAATGAAGCAGAAGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360242.9
ENST00000584156.5
CDS CCA 72 bp ATGTCGCCGCGTGACTTAATTGATGATTGTTGCATCTaGAAGATCTGTGTTTCCTCAATTAATCGATGTATG +
Preference number: 6 (lower is better)
Translates to: MSPRDLIDDCCI*KICVSSINRCM
Trigger: CATACATCGATTAATTGAGGAAACACAGATCTTCCAGATGCAACAATCATCAATTAAGTCACGCGGCGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000578970.5
ENST00000581520.1
ENST00000582371.5
ENST00000584156.5
ENST00000584775.5
CDS CAA 90 bp CATTTTGATCCACTCGGTTGTTTGCATGAGTCAGTTCTGCAATATTaGCCTGGTATTGTCTGTTTAGTTTATAGTAGGCATGTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: HFDPLGCLHESVLQY*PGIVCLVYSRHVEG
Trigger: ACCTTCAACATGCCTACTATAAACTAAACAGACAATACCAGGCAAATATTGCAGAACTGACTCATGCAAACAACCGAGTGGATCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360242.9
ENST00000584156.5
CDS CAA 90 bp GTGTGTTCATATGAGTGGAAGTGGTTGAGACCATCTGTAATAAGCTaGTTAACTAATTTGTATCACTCATATCTTTATCCCCAAGACTGG +
Preference number: 6 (lower is better)
Translates to: VCSYEWKWLRPSVIS*LTNLYHSYLYPQDW
Trigger: CCAGTCTTGGGGATAAAGATATGAGTGATACAAATTAGTTAACAAGCTTATTACAGATGGTCTCAACCACTTCCACTCATATGAACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580292.2
CDS GCA 72 bp AATTTCAGTTACTTCATTTTCCAAAGGCAGATTTATTaGTTTCAGTCTCAGCCCAGTTTTCGTTTCACCGTT +
Preference number: 6 (lower is better)
Translates to: NFSYFIFQRQIY*FQSQPSFRFTV
Trigger: AACGGTGAAACGAAAACTGGGCTGAGACTGAAAGCAATAAATCTGCCTTTGGAAAATGAAGTAACTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000584156.5
ENST00000584775.5
CDS CAA 72 bp AAATTTCAGTTACTTCATTTTCCAAAGGCAGATTTATaGCTTTCAGTCTCAGCCCAGTTTTCGTTTCACCGT +
Preference number: 6 (lower is better)
Translates to: KFQLLHFPKADL*LSVSAQFSFHR
Trigger: ACGGTGAAACGAAAACTGGGCTGAGACTGAAAGCAATAAATCTGCCTTTGGAAAATGAAGTAACTGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000584156.5
ENST00000584775.5
CDS CAA 90 bp ATCTTAGTTTCTTTACTTCTGCTTCATTTTGATCCACTCGGTTGTTaGCATGAGTCAGTTCTGCAATATTTGCCTGGTATTGTCTGTTTA +
Preference number: 6 (lower is better)
Translates to: ILVSLLLLHFDPLGC*HESVLQYLPGIVCL
Trigger: TAAACAGACAATACCAGGCAAATATTGCAGAACTGACTCATGCAAACAACCGAGTGGATCAAAATGAAGCAGAAGTAAAGAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360242.9
ENST00000584156.5
CDS CAA 90 bp GAGTGGAAGTGGTTGAGACCATCTGTAATAAGCTTGTTAACTAATTaGTATCACTCATATCTTTATCCCCAAGACTGGAGATATCTAAGT +
Preference number: 6 (lower is better)
Translates to: EWKWLRPSVISLLTN*YHSYLYPQDWRYLS
Trigger: ACTTAGATATCTCCAGTCTTGGGGATAAAGATATGAGTGATACAAATTAGTTAACAAGCTTATTACAGATGGTCTCAACCACTTCCACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580292.2
CDS TCA 72 bp TTCACTCATAAAGTAGTACCTCATCTTCTTTTTGATTaGGTCCCTGCTTTAGTTCTTCCACTCGTAATCTTA +
Preference number: 6 (lower is better)
Translates to: FTHKVVPHLLFD*VPALVLPLVIL
Trigger: TAAGATTACGAGTGGAAGAACTAAAGCAGGGACTCAATCAAAAAGAAGATGAGGTACTACTTTATGAGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584156.5
CDS CAA 72 bp GAACCACCATTGTTGAATAAATCAACACCATCTAGATaGGGCTTCATCTCCTCACTTAATTTTAGAGAATCA +
Preference number: 6 (lower is better)
Translates to: EPPLLNKSTPSR*GFISSLNFRES
Trigger: TGATTCTCTAAAATTAAGTGAGGAGATGAAGCCCAATCTAGATGGTGTTGATTTATTCAACAATGGTGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360242.9
ENST00000577772.5
ENST00000584156.5
ENST00000584775.5
CDS CAA 72 bp CTTGTTTCAGAAGACTCATACCACTTCTACATAGGCTaGCTCAGTTCAGTTACTTTCATACTAAATTTAACA +
Preference number: 6 (lower is better)
Translates to: LVSEDSYHFYIG*LSSVTFILNLT
Trigger: TGTTAAATTTAGTATGAAAGTAACTGAACTGAGCAAGCCTATGTAGAAGTGGTATGAGTCTTCTGAAACAAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580292.2