RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCBE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000183287

Ensembl transcript IDs: ENST00000398179.3, ENST00000439986.9, ENST00000589116.2, ENST00000589419.1, ENST00000649564.1, ENST00000650467.1

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTTGCATACCTGGGAACAGGGCTCACCAGGCCCACAGCAATTATaGACCTTGGAAAGATGGCCAAAGCCAGGGTGCTCTTCGCTGGTA +
Preference number: 1 (lower is better)
Translates to: PLHTWEQGSPGPQQL*TLERWPKPGCSSLV
Trigger: TACCAGCGAAGAGCACCCTGGCTTTGGCCATCTTTCCAAGGTTCATAATTGCTGTGGGCCTGGTGAGCCCTGTTCCCAGGTATGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 90 bp ATGATGGGGGAGTTGCTACCTGAAAACCTACAGAAATGTCTGGCCTaGAGAAGCCCTCCCTTGCATACCTGGGAACAGGGCTCACCAGGC +
Preference number: 1 (lower is better)
Translates to: MMGELLPENLQKCLA*RSPPLHTWEQGSPG
Trigger: GCCTGGTGAGCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGTTTTCAGGTAGCAACTCCCCCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR GCA 90 bp GCTGCTGATGGCATTAGTGAGGTCAGCCCAAGCCAGCAACCTCCTTaGAGACTTCAGCCCCACTGTATATTGGTTCAGCCTGGATCATGG +
Preference number: 1 (lower is better)
Translates to: AADGISEVSPSQQPP*RLQPHCILVQPGSW
Trigger: CCATGATCCAGGCTGAACCAATATACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCTTGGGCTGACCTCACTAATGCCATCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 90 bp GCAACCTCCTTGCAGACTTCAGCCCCACTGTATATTGGTTCAGCCTaGATCATGGCACCTAATGGTACCTTCTGGGCACCTGCTCAGAAC +
Preference number: 1 (lower is better)
Translates to: ATSLQTSAPLYIGSA*IMAPNGTFWAPAQN
Trigger: GTTCTGAGCAGGTGCCCAGAAGGTACCATTAGGTGCCATGATCCAGGCTGAACCAATATACAGTGGGGCTGAAGTCTGCAAGGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 90 bp ATACCTGGGAACAGGGCTCACCAGGCCCACAGCAATTATGAACCTTaGAAAGATGGCCAAAGCCAGGGTGCTCTTCGCTGGTATTTGGTG +
Preference number: 1 (lower is better)
Translates to: IPGNRAHQAHSNYEP*KDGQSQGALRWYLV
Trigger: CACCAAATACCAGCGAAGAGCACCCTGGCTTTGGCCATCTTTCCAAGGTTCATAATTGCTGTGGGCCTGGTGAGCCCTGTTCCCAGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR GCA 90 bp TACCTGAAAACCTACAGAAATGTCTGGCCTGGAGAAGCCCTCCCTTaGATACCTGGGAACAGGGCTCACCAGGCCCACAGCAATTATGAA +
Preference number: 1 (lower is better)
Translates to: YLKTYRNVWPGEALP*IPGNRAHQAHSNYE
Trigger: TTCATAATTGCTGTGGGCCTGGTGAGCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGTTTTCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 90 bp CCTTGCAGACTTCAGCCCCACTGTATATTGGTTCAGCCTGGATCATaGCACCTAATGGTACCTTCTGGGCACCTGCTCAGAACCAGGAAT +
Preference number: 1 (lower is better)
Translates to: PCRLQPHCILVQPGS*HLMVPSGHLLRTRN
Trigger: ATTCCTGGTTCTGAGCAGGTGCCCAGAAGGTACCATTAGGTGCCATGATCCAGGCTGAACCAATATACAGTGGGGCTGAAGTCTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR TCA 90 bp ACAAAGGAGCAGATCATCCTTCTGGTCTCTTGCTCCTGGTGCTTCTaGATCCACAGCAAACCTTGGCAGGAACATGCTTCCCTTTGCCAC +
Preference number: 1 (lower is better)
Translates to: TKEQIILLVSCSWCF*IHSKPWQEHASLCH
Trigger: GTGGCAAAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATTCAGAAGCACCAGGAGCAAGAGACCAGAAGGATGATCTGCTCCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 90 bp AACCTTGGAAAGATGGCCAAAGCCAGGGTGCTCTTCGCTGGTATTTaGTGGGGTAATACTCACCTTTCCTTCCTTCCAAAACCAATGAAC +
Preference number: 1 (lower is better)
Translates to: NLGKMAKARVLFAGI*WGNTHLSFLPKPMN
Trigger: GTTCATTGGTTTTGGAAGGAAGGAAAGGTGAGTATTACCCCACCAAATACCAGCGAAGAGCACCCTGGCTTTGGCCATCTTTCCAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 90 bp CAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTaGTTGGTGTGGCCCTCTGTCATGAATGTTGAATTTTGCAGAGAG +
Preference number: 1 (lower is better)
Translates to: QMGINSCSVPLSINP*LVWPSVMNVEFCRE
Trigger: CTCTCTGCAAAATTCAACATTCATGACAGAGGGCCACACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 90 bp CTTGGAAAGATGGCCAAAGCCAGGGTGCTCTTCGCTGGTATTTGGTaGGGTAATACTCACCTTTCCTTCCTTCCAAAACCAATGAACATT +
Preference number: 1 (lower is better)
Translates to: LGKMAKARVLFAGIW*GNTHLSFLPKPMNI
Trigger: AATGTTCATTGGTTTTGGAAGGAAGGAAAGGTGAGTATTACCCCACCAAATACCAGCGAAGAGCACCCTGGCTTTGGCCATCTTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR TCA 90 bp CAAAAAGAAATGGGAAAGGACATGGCAGGATGGGAAATTCCAACATaGGCTAATATGAGTGTGAGAACGATCATTTGCAGGAGAGTGAAA +
Preference number: 1 (lower is better)
Translates to: QKEMGKDMAGWEIPT*ANMSVRTIICRRVK
Trigger: TTTCACTCTCCTGCAAATGATCGTTCTCACACTCATATTAGCTCATGTTGGAATTTCCCATCCTGCCATGTCCTTTCCCATTTCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR TCA 90 bp CACTTTAAAAATGTTAGTGGAGAGTCACCAGGAATTTTGCATAAATaGGACATAGAGGAGCAAAGTGTTCATGAAAGACTCGGTCACATG +
Preference number: 1 (lower is better)
Translates to: HFKNVSGESPGILHK*DIEEQSVHERLGHM
Trigger: CATGTGACCGAGTCTTTCATGAACACTTTGCTCCTCTATGTCTCATTTATGCAAAATTCCTGGTGACTCTCCACTAACATTTTTAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CAA 90 bp AGCCCAAGCCAGCAACCTCCTTGCAGACTTCAGCCCCACTGTATATaGGTTCAGCCTGGATCATGGCACCTAATGGTACCTTCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SPSQQPPCRLQPHCI*VQPGSWHLMVPSGH
Trigger: GTGCCCAGAAGGTACCATTAGGTGCCATGATCCAGGCTGAACCAATATACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCTGGTCTCGATCTCCTaGCCTTGTGATCTCCCCGCC +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGLVSIS*PCDLPA
Trigger: GGCGGGGAGATCACAAGGTCAGGAGATCGAGACCAG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGTGGTCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVVVSIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGACCAC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTGCAAACCACCCCAATaGACTCTTAGTGAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFCKPPQ*TLSEKQ
Trigger: CTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CAA 90 bp GTGCTTCTGAATCCACAGCAAACCTTGGCAGGAACATGCTTCCCTTaGCCACCCAGAGGTGCTCTGAGAAAACACTCTAACTCACTAGGA +
Preference number: 2 (lower is better)
Translates to: VLLNPQQTLAGTCFP*PPRGALRKHSNSLG
Trigger: TCCTAGTGAGTTAGAGTGTTTTCTCAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATTCAGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCGGTCACATGCTGACTaGCATGAGTCCTGCATTTCC +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGRSHAD*HESCIS
Trigger: GGAAATGCAGGACTCATGTCAGTCAGCATGTGACCG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCCTAATGGTACCTTCTaGGCACCTGCTCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCPNGTF*APAQNQ
Trigger: CTGGTTCTGAGCAGGTGCCCAGAAGGTACCATTAGG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGTGGTCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYVVSIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGACCAC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTACCTTCTGGGCACCTaGTCAGAACCAGGAATTCTG +
Preference number: 2 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCYLLGT*SEPGIL
Trigger: CAGAATTCCTGGTTCTGAGCAGGTGCCCAGAAGGTA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAGCCAGCAACCTCCTTaGAGACTTCAGCCCCACTGT +
Preference number: 2 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSQQPP*RLQPHC
Trigger: ACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGGAGCAAAGTGTTCATaGAAGACTCGGTCACATGCT +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGGAKCS*KTRSHA
Trigger: AGCATGTGACCGAGTCTTTCATGAACACTTTGCTCC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATGGTCTTGATCTCCTaGCCTCATGATGCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVMVLIS*PHDAPA
Trigger: GGCGGGCGCATCATGAGGTCAGGAGATCAAGACCAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATCACTCCCTCATGTCTaGAGGCCTAGGAGGGGACTC +
Preference number: 2 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKSLPHV*RPRRGL
Trigger: GAGTCCCCTCCTAGGCCTGCAGACATGAGGGAGTGA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGGTGGCAAGCTTGGTTaGCTCCAGACAAAAACTTGT +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGGGKLG*LQTKTC
Trigger: ACAAGTTTTTGTCTGGAGCCAACCAAGCTTGCCACC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTGTTGGTGGCAAGCTTaGTTGGCTCCAGACAAAAAC +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGCWWQA*LAPDKN
Trigger: GTTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTATCCACAGCAAACCTTaGCAGGAACATGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGIHSKP*QEHASL
Trigger: AAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGAT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTGCCCAGACTGGCCTTaGACTCCTGGGCTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYCPDWP*TPGLKG
Trigger: TCCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAAGCCAGCAACCTCCTTaGAGACTTCAGCCCCACTGT +
Preference number: 2 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKSQQPP*RLQPHC
Trigger: ACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CAA 90 bp ATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTaGGTGTGGCCCTCTGTCATGAATGTTGAATTTTGCAGAGAGAAG +
Preference number: 2 (lower is better)
Translates to: MGINSCSVPLSINPW*VWPSVMNVEFCREK
Trigger: CTTCTCTCTGCAAAATTCAACATTCATGACAGAGGGCCACACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTGGTTTAACTGCAGGTaGGTTGATCTTTCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGWFNCR*VDLSLP
Trigger: AGGAAGAGAAAGATCAACTCACCTGCAGTTAAACCA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTCACTCCCTCATGTCTaGAGGCCTAGGAGGGGACTC +
Preference number: 2 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSLPHV*RPRRGL
Trigger: GAGTCCCCTCCTAGGCCTGCAGACATGAGGGAGTGA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGTGAGAACGATCATTTaGAGGAGAGTGAAAATCTCC +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGVRTII*RRVKIS
Trigger: GGAGATTTTCACTCTCCTGCAAATGATCGTTCTCAC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAATCTTTCTCTTCCTTTaGCGTGACGGTGTTGGGATG +
Preference number: 2 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKIFLFL*RDGVGM
Trigger: CATCCCAACACCGTCACGCCAAAGGAAGAGAAAGAT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATACTAGAGGAGTTATaGTCTATTGTGAACACACAT +
Preference number: 2 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFILEEL*SIVNTH
Trigger: ATGTGTGTTCACAATAGACCATAACTCCTCTAGTAT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATGTTGGTGGCAAGCTTaGTTGGCTCCAGACAAAAAC +
Preference number: 2 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKCWWQA*LAPDKN
Trigger: GTTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACTCTCAATATGTTGGTaGCAAGCTTGGTTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKLSICW*QAWLAP
Trigger: TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTACCTTCTGGGCACCTaGTCAGAACCAGGAATTCTG +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVYLLGT*SEPGIL
Trigger: CAGAATTCCTGGTTCTGAGCAGGTGCCCAGAAGGTA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCATCTTTCTCTTCCTTTaGCGTGACGGTGTTGGGATG +
Preference number: 2 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFIFLFL*RDGVGM
Trigger: CATCCCAACACCGTCACGCCAAAGGAAGAGAAAGAT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAGCCCCACTGTATATTaGTTCAGCCTGGATCATGGC +
Preference number: 2 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSPTVY*FSLDHG
Trigger: GCCATGATCCAGGCTGAACCAATATACAGTGGGGCT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGCAGATCATCCTTCTaGTCTCTTGCTCCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVSRSSF*SLAPGA
Trigger: AGCACCAGGAGCAAGAGACCAGAAGGATGATCTGCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAACCCGTGGTTGGTGTaGCCCTCTGTCATGAATGTT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVNPWLV*PSVMNV
Trigger: AACATTCATGACAGAGGGCCACACCAACCACGGGTT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACAGATAAGCATGGCATaGAACCTTAAGCACCGTATT +
Preference number: 2 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKQISMA*NLKHRI
Trigger: AATACGGTGCTTAAGGTTTCATGCCATGCTTATCTG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAAAGAAAAGTTACAATaGAAACCACCCCAATGGACT +
Preference number: 2 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCKEKLQ*KPPQWT
Trigger: AGTCCATTGGGGTGGTTTGCATTGTAACTTTTCTTT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACACCTTGGCAGGAACATaGTTCCCTTTGCCACCCAGA +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYTLAGT*FPLPPR
Trigger: TCTGGGTGGCAAAGGGAAGCATGTTCCTGCCAAGGT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCTGTGCCTGGCCCCATaGACTATTTTCAACAGCATA +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVLCLAP*TIFNSI
Trigger: TATGCTGTTGAAAATAGTGCATGGGGCCAGGCACAG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAATCTTTCTCTTCCTTTaGCGTGACGGTGTTGGGATG +
Preference number: 2 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPIFLFL*RDGVGM
Trigger: CATCCCAACACCGTCACGCCAAAGGAAGAGAAAGAT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGTTCAGCCTGGATCATaGCACCTAATGGTACCTTCT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVVQPGS*HLMVPS
Trigger: AGAAGGTACCATTAGGTGCCATGATCCAGGCTGAAC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGTTCAGCCTGGATCATaGCACCTAATGGTACCTTCT +
Preference number: 2 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPVQPGS*HLMVPS
Trigger: AGAAGGTACCATTAGGTGCCATGATCCAGGCTGAAC...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATATATTGGTTCAGCCTaGATCATGGCACCTAATGGT +
Preference number: 2 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKYIGSA*IMAPNG
Trigger: ACCATTAGGTGCCATGATCCAGGCTGAACCAATATA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCTCTCTATAAACCCGTaGTTGGTGTGGCCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLSINP*LVWPSV
Trigger: GACAGAGGGCCACACCAACCACGGGTTTATAGAGAG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTGGTCAGGATGGTCTTaGTCTCCTGACCTCATGATG +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYWSGWS*SPDLMM
Trigger: CATCATGAGGTCAGGAGATCAAGACCATCCTGACCA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTATACTAGAGGAGTTATaGTCTATTGTGAACACACAT +
Preference number: 2 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGILEEL*SIVNTH
Trigger: ATGTGTGTTCACAATAGACCATAACTCCTCTAGTAT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAGCAGATCATCCTTCTaGTCTCTTGCTCCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSRSSF*SLAPGA
Trigger: AGCACCAGGAGCAAGAGACCAGAAGGATGATCTGCT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCTTGCTTTGATCCCCTaGGGAGTAAGAGGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLALIP*GVRGSF
Trigger: AAAGGACCCTCTTACTCCCCAGGGGATCAAAGCAAG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTGGTTTAACTGCAGGTaGGTTGATCTTTCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVWFNCR*VDLSLP
Trigger: AGGAAGAGAAAGATCAACTCACCTGCAGTTAAACCA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACAGATAAGCATGGCATaGAACCTTAAGCACCGTATT +
Preference number: 2 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPQISMA*NLKHRI
Trigger: AATACGGTGCTTAAGGTTTCATGCCATGCTTATCTG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGGGGAGTTGCTACCTaGAAACCTACAGAAATGTCT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGGVAT*KPTEMS
Trigger: AGACATTTCTGTAGGTTTTCAGGTAGCAACTCCCCC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAAAGAAAAGTTACAATaGAAACCACCCCAATGGACT +
Preference number: 2 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKKEKLQ*KPPQWT
Trigger: AGTCCATTGGGGTGGTTTGCATTGTAACTTTTCTTT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTGCAAACCACCCCAATaGACTCTTAGTGAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYCKPPQ*TLSEKQ
Trigger: CTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATATATTGGTTCAGCCTaGATCATGGCACCTAATGGT +
Preference number: 2 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKYIGSA*IMAPNG
Trigger: ACCATTAGGTGCCATGATCCAGGCTGAACCAATATA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGTGGCAAGCTTGGTTaGCTCCAGACAAAAACTTGT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGGKLG*LQTKTC
Trigger: ACAAGTTTTTGTCTGGAGCCAACCAAGCTTGCCACC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCTCTCAATATGTTGGTaGCAAGCTTGGTTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLSICW*QAWLAP
Trigger: TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCATAACCACTGTGCCTaGCCCCATGCACTATTTTCA +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYHNHCA*PHALFS
Trigger: TGAAAATAGTGCATGGGGCCAGGCACAGTGGTTATG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTCATTTGCAGGAGAGTaGAAATCTCCCGCAAAGGTA +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSFAGE*KSPAKV
Trigger: TACCTTTGCGGGAGATTTTCACTCTCCTGCAAATGA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTTCGCTGGTATTTGGTaGGGTAATACTCACCTTTCC +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYFAGIW*GNTHLS
Trigger: GGAAAGGTGAGTATTACCCCACCAAATACCAGCGAA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTCTGGAATAGTTTCATaGAACCCAGACAATACTACT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVSGIVS*NPDNTT
Trigger: AGTAGTATTGTCTGGGTTTCATGAAACTATTCCAGA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGCCAAACATGCAGTTTaGTTGCATTTTATGAGCATT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVAKHAV*LHFMSI
Trigger: AATGCTCATAAAATGCAACCAAACTGCATGTTTGGC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTATTATTCTAGCCTATaGCCAAACATGCAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVYYSSL*PNMQFG
Trigger: ACCAAACTGCATGTTTGGCCATAGGCTAGAATAATA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTTCAGGAAGGTTATTTaGCAGATGTTAAGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYFRKVI*QMLSLQ
Trigger: CTGCAGACTTAACATCTGTCAAATAACCTTCCTGAA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGCCTATGGCCAAACATaGAGTTTGGTTGCATTTTAT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYAYGQT*SLVAFY
Trigger: ATAAAATGCAACCAAACTGCATGTTTGGCCATAGGC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGTACATATCAGTCTTaGAGTAGTCCAAGTTTTGAA +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVSTYQS*SSPSFE
Trigger: TTCAAAACTTGGACTACTGCAAGACTGATATGTACT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATACTAGAGGAGTTATaGTCTATTGTGAACACACAT +
Preference number: 2 (lower is better)
Translates to: STCCLAWIPPITFLFRKVILEEL*SIVNTH
Trigger: ATGTGTGTTCACAATAGACCATAACTCCTCTAGTAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGAATTTTGCATAAATaGGACATAGAGGAGCAAAGT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGILHK*DIEEQS
Trigger: ACTTTGCTCCTCTATGTCTCATTTATGCAAAATTCC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAAAGAAAAGTTACAATaGAAACCACCCCAATGGACT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYKEKLQ*KPPQWT
Trigger: AGTCCATTGGGGTGGTTTGCATTGTAACTTTTCTTT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAGAAATGACTTCCTTTaGTCAATGAATCCAATGGCA +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYRNDFL*SMNPMA
Trigger: TGCCATTGGATTCATTGACCAAAGGAAGTCATTTCT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCTCTCATACAGCTTGTaGATAGTTTTGTGTGTTTTT +
Preference number: 2 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLSYSL*IVLCVF
Trigger: AAAAACACACAAAACTATGCACAAGCTGTATGAGAG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR GCA 72 bp ACCTACAGAAATGTCTGGCCTGGAGAAGCCCTCCCTTaGATACCTGGGAACAGGGCTCACCAGGCCCACAGC +
Preference number: 3 (lower is better)
Translates to: TYRNVWPGEALP*IPGNRAHQAHS
Trigger: GCTGTGGGCCTGGTGAGCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp AACAGGGCTCACCAGGCCCACAGCAATTATGAACCTTaGAAAGATGGCCAAAGCCAGGGTGCTCTTCGCTGG +
Preference number: 3 (lower is better)
Translates to: NRAHQAHSNYEP*KDGQSQGALRW
Trigger: CCAGCGAAGAGCACCCTGGCTTTGGCCATCTTTCCAAGGTTCATAATTGCTGTGGGCCTGGTGAGCCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR GCA 72 bp GGCATTAGTGAGGTCAGCCCAAGCCAGCAACCTCCTTaGAGACTTCAGCCCCACTGTATATTGGTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: GISEVSPSQQPP*RLQPHCILVQP
Trigger: AGGCTGAACCAATATACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCTTGGGCTGACCTCACTAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp GGTTCAGCCTGGATCATGGCACCTAATGGTACCTTCTaGGCACCTGCTCAGAACCAGGAATTCTGCACCTCT +
Preference number: 3 (lower is better)
Translates to: GSAWIMAPNGTF*APAQNQEFCTS
Trigger: AGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCCAGAAGGTACCATTAGGTGCCATGATCCAGGCTGAACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp GAGTTGCTACCTGAAAACCTACAGAAATGTCTGGCCTaGAGAAGCCCTCCCTTGCATACCTGGGAACAGGGC +
Preference number: 3 (lower is better)
Translates to: ELLPENLQKCLA*RSPPLHTWEQG
Trigger: GCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGTTTTCAGGTAGCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp TGGGGGAGTTGCTACCTGAAAACCTACAGAAATGTCTaGCCTGGAGAAGCCCTCCCTTGCATACCTGGGAAC +
Preference number: 3 (lower is better)
Translates to: WGSCYLKTYRNV*PGEALPCIPGN
Trigger: GTTCCCAGGTATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGTTTTCAGGTAGCAACTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTAGCACATCGACACGTTaGTCCTCCCCACCCCTTTTT +
Preference number: 3 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFSTSTR*SSPPLF
Trigger: AAAAAGGGGTGGGGAGGACAAACGTGTCGATGTGCT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTTGCCCAGACTGGCCTaGAACTCCTGGGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGLPRLA*NSWAQG
Trigger: CCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCAA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp CTTCAGCCCCACTGTATATTGGTTCAGCCTGGATCATaGCACCTAATGGTACCTTCTGGGCACCTGCTCAGA +
Preference number: 3 (lower is better)
Translates to: LQPHCILVQPGS*HLMVPSGHLLR
Trigger: TCTGAGCAGGTGCCCAGAAGGTACCATTAGGTGCCATGATCCAGGCTGAACCAATATACAGTGGGGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGGAACATGCTTCCCTTaGCCACCCAGAGGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGGTCFP*PPRGAL
Trigger: CAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGAACATGCTTCCCTTaGCCACCCAGAGGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGTCFP*PPRGAL
Trigger: CAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR TCA 72 bp CAGATCATCCTTCTGGTCTCTTGCTCCTGGTGCTTCTaGATCCACAGCAAACCTTGGCAGGAACATGCTTCC +
Preference number: 3 (lower is better)
Translates to: QIILLVSCSWCF*IHSKPWQEHAS
Trigger: GGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATTCAGAAGCACCAGGAGCAAGAGACCAGAAGGATGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR GCA 72 bp GTGCTTCTGAATCCACAGCAAACCTTGGCAGGAACATaGTTCCCTTTGCCACCCAGAGGTGCTCTGAGAAAA +
Preference number: 3 (lower is better)
Translates to: VLLNPQQTLAGT*FPLPPRGALRK
Trigger: TTTTCTCAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATTCAGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp TTGCAGACTTCAGCCCCACTGTATATTGGTTCAGCCTaGATCATGGCACCTAATGGTACCTTCTGGGCACCT +
Preference number: 3 (lower is better)
Translates to: LQTSAPLYIGSA*IMAPNGTFWAP
Trigger: AGGTGCCCAGAAGGTACCATTAGGTGCCATGATCCAGGCTGAACCAATATACAGTGGGGCTGAAGTCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTAGCACATCGACACGTTaGTCCTCCCCACCCCTTTTT +
Preference number: 3 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGSTSTR*SSPPLF
Trigger: AAAAAGGGGTGGGGAGGACAAACGTGTCGATGTGCT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCAGCCCCACTGTATATaGGTTCAGCCTGGATCATGG +
Preference number: 3 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGQPHCI*VQPGSW
Trigger: CCATGATCCAGGCTGAACCAATATACAGTGGGGCTG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp CCCTCAACAACGTTACAAAGGAGCAGATCATCCTTCTaGTCTCTTGCTCCTGGTGCTTCTGAATCCACAGCA +
Preference number: 3 (lower is better)
Translates to: PSTTLQRSRSSF*SLAPGASESTA
Trigger: TGCTGTGGATTCAGAAGCACCAGGAGCAAGAGACCAGAAGGATGATCTGCTCCTTTGTAACGTTGTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCCTATAAGCTGCTCATaGGAAACAAGAGGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCPISCS*ETRGPS
Trigger: TGAGGGCCCTCTTGTTTCCAATGAGCAGCTTATAGG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp AAGATGGCCAAAGCCAGGGTGCTCTTCGCTGGTATTTaGTGGGGTAATACTCACCTTTCCTTCCTTCCAAAA +
Preference number: 3 (lower is better)
Translates to: KMAKARVLFAGI*WGNTHLSFLPK
Trigger: TTTTGGAAGGAAGGAAAGGTGAGTATTACCCCACCAAATACCAGCGAAGAGCACCCTGGCTTTGGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACAGCCCCACTGTATATaGGTTCAGCCTGGATCATGG +
Preference number: 3 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKQPHCI*VQPGSW
Trigger: CCATGATCCAGGCTGAACCAATATACAGTGGGGCTG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTATTACTCTCAATATGTaGGTGGCAAGCTTGGTTGGC +
Preference number: 3 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGITLNM*VASLVG
Trigger: GCCAACCAAGCTTGCCACCAACATATTGAGAGTAAT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTTGCCCAGACTGGCCTaGAACTCCTGGGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLPRLA*NSWAQG
Trigger: CCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCAA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAGCACATCGACACGTTaGTCCTCCCCACCCCTTTTT +
Preference number: 3 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSTSTR*SSPPLF
Trigger: AAAAAGGGGTGGGGAGGACAAACGTGTCGATGTGCT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACAGCCCCACTGTATATaGGTTCAGCCTGGATCATGG +
Preference number: 3 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPQPHCI*VQPGSW
Trigger: CCATGATCCAGGCTGAACCAATATACAGTGGGGCTG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAAGCCAGCAACCTCCTaGCAGACTTCAGCCCCACTG +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYKPATS*QTSAPL
Trigger: CAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCTT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGAACATGCTTCCCTTaGCCACCCAGAGGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGTCFP*PPRGAL
Trigger: CAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGGGTTTCACCACGTGTaGGTCAGGATGGTCTTGATC +
Preference number: 3 (lower is better)
Translates to: STCCLAWIPPITFLFRKVGFHHV*VRMVLI
Trigger: GATCAAGACCATCCTGACCAACACGTGGTGAAACCC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp ATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTaGTTGGTGTGGCCCTCTGTCATGAATGTTGAATTT +
Preference number: 3 (lower is better)
Translates to: INSCSVPLSINP*LVWPSVMNVEF
Trigger: AAATTCAACATTCATGACAGAGGGCCACACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTCTATAAACCCGTGGTaGGTGTGGCCCTCTGTCATG +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSINPW*VWPSVM
Trigger: CATGACAGAGGGCCACACCAACCACGGGTTTATAGA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAATCCACAGCAAACCTaGGCAGGAACATGCTTCCCT +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYNPQQT*AGTCFP
Trigger: AGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGTTGCCACTAGAGGTTaGCAAAGCCCCTTCCTAACA +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYVATRG*QSPFLT
Trigger: TGTTAGGAAGGGGCTTTGCAAACCTCTAGTGGCAAC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp GTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTaGCTCCAGACAAAAACTTGTAATACCCAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: VYYSQYVGGKLG*LQTKTCNTQGE
Trigger: TTCTCCTTGGGTATTACAAGTTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATTAACTGCAGGTGAGTaGATCTTTCTCTTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPLTAGE*IFLFLW
Trigger: CCAAAGGAAGAGAAAGATCAACTCACCTGCAGTTAA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAGGGAAGGAAGACTGTaGCCACTAGAGGTTTGCAAA +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYREGRL*PLEVCK
Trigger: TTTGCAAACCTCTAGTGGCAACAGTCTTCCTTCCCT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCATCTCTCATACAGCTaGTGCATAGTTTTGTGTGTT +
Preference number: 3 (lower is better)
Translates to: STCCLAWIPPITFLFRKVHLSYS*CIVLCV
Trigger: AACACACAAAACTATGCACAAGCTGTATGAGAGATG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAATATGATGGGGGAGTaGCTACCTGAAAACCTACAG +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYNMMGE*LPENLQ
Trigger: CTGTAGGTTTTCAGGTAGCAACTCCCCCATCATATT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp ACTCTGAAAATAGCATCGTATTTGGAAGAAGAGGAGTaGAGAGACGTCAGGAGAAGAGAAGAGAAAAATGTA +
Preference number: 3 (lower is better)
Translates to: TLKIASYLEEEE*RDVRRREEKNV
Trigger: TACATTTTTCTCTTCTCTTCTCCTGACGTCTCTCCACTCCTCTTCTTCCAAATACGATGCTATTTTCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTTAACTGCAGGTGAGTaGATCTTTCTCTTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLTAGE*IFLFLW
Trigger: CCAAAGGAAGAGAAAGATCAACTCACCTGCAGTTAA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATATTTTTATTCCCATaGCTTTCCAAGAACAGAGGC +
Preference number: 3 (lower is better)
Translates to: STCCLAWIPPITFLFRKVIFLFP*LSKNRG
Trigger: GCCTCTGTTCTTGGAAAGCAATGGGAATAAAAATAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR TCA 72 bp AATGTTAGTGGAGAGTCACCAGGAATTTTGCATAAATaGGACATAGAGGAGCAAAGTGTTCATGAAAGACTC +
Preference number: 3 (lower is better)
Translates to: NVSGESPGILHK*DIEEQSVHERL
Trigger: GAGTCTTTCATGAACACTTTGCTCCTCTATGTCTCATTTATGCAAAATTCCTGGTGACTCTCCACTAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CCA 72 bp AACTTTAGATGGCTCTATTCTACTTGTTGTTTGGCCTaGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTT +
Preference number: 3 (lower is better)
Translates to: NFRWLYSTCCLA*IPPITFLFRKV
Trigger: AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGAATAGAGCCATCTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCCCCGTGGGCCGGGCTaGCCAGGAGGGCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFPRGPG*PGGPGI
Trigger: TATGCCAGGCCCTCCTGGGCAGCCCGGCCCACGGGG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTCCTGGTGCCCCTGGTaGACCCACAGGGCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFSWCPW*THRAPP
Trigger: CGGAGGGGCCCTGTGGGTCCACCAGGGGCACCAGGA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTCTTCCTGGTGCCCCTaGTGGACCCACAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFSSWCP*WTHRAP
Trigger: AGGGGCCCTGTGGGTCCACCAGGGGCACCAGGAAGA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTAGAACCAGGGGGTCCTaGAGACCCTCTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFRTRGS*RPSGPR
Trigger: CCTGGGCCCAGAGGGTCTCCAGGACCCCCTGGTTCT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTCCCATGGGTCCCATTaGGCCCCGTGGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGSHGSH*APWAGL
Trigger: CAGCCCGGCCCACGGGGCTCAATGGGACCCATGGGA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCCTGCGGTGTCCGGCTaGCGCGAGGGCCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCPAVSG*REGPEV
Trigger: AACCTCAGGGCCCTCGCGCCAGCCGGACACCGCAGG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCATACCGGGGAAGCCTaGGCTTCCCTTTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFHTGEA*ASLWSW
Trigger: CCAGGACCAAAGGGAAGCCCAGGCTTCCCCGGTATG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCTGCCCAGGAGGGCCTaGCATACCGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGLPRRA*HTGEAW
Trigger: CCAGGCTTCCCCGGTATGCCAGGCCCTCCTGGGCAG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCCTCCCTTGCATACCTaGGAACAGGGCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFPPLHT*EQGSPG
Trigger: GCCTGGTGAGCCCTGTTCCCAGGTATGCAAGGGAGG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATGGTCTTGATCTCCTaGCCTCATGATGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFMVLIS*PHDAPA
Trigger: GGCGGGCGCATCATGAGGTCAGGAGATCAAGACCAT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTAGCTTCCCGAGTAGCTaGGACTACAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFSFPSS*DYRRAP
Trigger: TGGTGCACGCCTGTAGTCTCAGCTACTCGGGAAGCT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTTCTGGGGCACAGGCTaGGAAGTGGGGAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFFWGTG*EVGRES
Trigger: ACTCTCTCTCCCCACTTCTCAGCCTGTGCCCCAGAA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCCCCGTGGGCCGGGCTaGCCAGGAGGGCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFPRGPG*PGGPGI
Trigger: TATGCCAGGCCCTCCTGGGCAGCCCGGCCCACGGGG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCAGAGCCCAGGTCCATaGCTTCTGGGTAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFQSPGP*LLGSWE
Trigger: TTCCCAGCTACCCAGAAGCCATGGACCTGGGCTCTG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTGGAAGGTAGGTGTTTaGGGCCAGCACCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFWKVGV*GQHLVT
Trigger: GGTGACAAGGTGCTGGCCTCAAACACCTACCTTCCA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTGGCCAAAGTTGTCCGTaGACTGCTGTTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFGQSCP*TAVHRE
Trigger: CTCCCTGTGAACAGCAGTGCACGGACAACTTTGGCC...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTCCTGGTGCCCCTGGTaGACCCACAGGGCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFSWCPW*THRAPP
Trigger: CGGAGGGGCCCTGTGGGTCCACCAGGGGCACCAGGA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCTGGTCTCGATCTCCTaGCCTTGTGATCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCLVSIS*PCDLPA
Trigger: GGCGGGGAGATCACAAGGTCAGGAGATCGAGACCAG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTTCACGCCATTCTCCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCFTPFS*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTTCACGCCATTCTCCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGFTPFS*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCATACCGGGGAAGCCTaGGCTTCCCTTTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGHTGEA*ASLWSW
Trigger: CCAGGACCAAAGGGAAGCCCAGGCTTCCCCGGTATG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCATACCGGGGAAGCCTaGGCTTCCCTTTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCHTGEA*ASLWSW
Trigger: CCAGGACCAAAGGGAAGCCCAGGCTTCCCCGGTATG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATCCTGGTGCCCCTGGTaGACCCACAGGGCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKSWCPW*THRAPP
Trigger: CGGAGGGGCCCTGTGGGTCCACCAGGGGCACCAGGA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCAGGTCCATGGCTTCTaGGTAGCTGGGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFQVHGF*VAGKFL
Trigger: CAGGAATTTCCCAGCTACCCAGAAGCCATGGACCTG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCCTAATGGTACCTTCTaGGCACCTGCTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFPNGTF*APAQNQ
Trigger: CTGGTTCTGAGCAGGTGCCCAGAAGGTACCATTAGG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCAGAAATGTCTGGCCTaGAGAAGCCCTCCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFQKCLA*RSPPLH
Trigger: ATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTGGTCAGGATGGTCTTaGTCTCCTGACCTCATGATG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFWSGWS*SPDLMM
Trigger: CATCATGAGGTCAGGAGATCAAGACCATCCTGACCA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAGCTTCCCGAGTAGCTaGGACTACAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSFPSS*DYRRAP
Trigger: TGGTGCACGCCTGTAGTCTCAGCTACTCGGGAAGCT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCCCCGTGGGCCGGGCTaGCCAGGAGGGCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYPRGPG*PGGPGI
Trigger: TATGCCAGGCCCTCCTGGGCAGCCCGGCCCACGGGG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGGGCCCCTCCGGCCTTaGTTAATGTGGGACAGATCA +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGGPLRP*LMWDRS
Trigger: TGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTCACTCCCTCATGTCTaGAGGCCTAGGAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSLPHV*RPRRGL
Trigger: GAGTCCCCTCCTAGGCCTGCAGACATGAGGGAGTGA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGGCGTTTGCACCACCTaGGGTGTCCGGCTGGCGCGA +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKGVCTT*GVRLAR
Trigger: TCGCGCCAGCCGGACACCGCAGGTGGTGCAAACGCC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTAGAACTCCTTGCATGTaGCACAGCAAGTTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFRTPCM*HSKFRL
Trigger: AAGCCGGAACTTGCTGTGCCACATGCAAGGAGTTCT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCTGCCCAGGAGGGCCTaGCATACCGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVLPRRA*HTGEAW
Trigger: CCAGGCTTCCCCGGTATGCCAGGCCCTCCTGGGCAG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCAGAGCCCAGGTCCATaGCTTCTGGGTAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCQSPGP*LLGSWE
Trigger: TTCCCAGCTACCCAGAAGCCATGGACCTGGGCTCTG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTGGAAGGTAGGTGTTTaGGGCCAGCACCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCWKVGV*GQHLVT
Trigger: GGTGACAAGGTGCTGGCCTCAAACACCTACCTTCCA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTCCCATGGGTCCCATTaGGCCCCGTGGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSHGSH*APWAGL
Trigger: CAGCCCGGCCCACGGGGCTCAATGGGACCCATGGGA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATCCTCTGCTGAAGAGTaGGTCCGGTGCCCGAACACC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSSAEE*VRCPNT
Trigger: GGTGTTCGGGCACCGGACTCACTCTTCAGCAGAGGA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTGGAGCAAAGTGTTCATaGAAGACTCGGTCACATGCT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFGAKCS*KTRSHA
Trigger: AGCATGTGACCGAGTCTTTCATGAACACTTTGCTCC...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTGGGGGAGTTGCTACCTaGAAACCTACAGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFGGVAT*KPTEMS
Trigger: AGACATTTCTGTAGGTTTTCAGGTAGCAACTCCCCC...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTAAGTTGTCCGTGCACTaGTGTTCACAGGGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGKLSVH*CSQGAS
Trigger: CGAGGCTCCCTGTGAACAGCAGTGCACGGACAACTT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTACAGCGTCCCATTGCTaGTGGCACACTCATCAATAT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFTASHC*WHTHQY
Trigger: ATATTGATGAGTGTGCCAGCAGCAATGGGACGCTGT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTCTGGTAGAACTCCTTaGATGTGGCACAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFSGRTP*MWHSKF
Trigger: GAACTTGCTGTGCCACATGCAAGGAGTTCTACCAGA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATCTTTTGCTTCAGCTaGAGCACGGTCTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFIFCFS*STVCFI
Trigger: GATGAAGCAGACCGTGCTGCAGCTGAAGCAAAAGAT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCCGAACACCTTTTCCTaGAGCTCAGTGATGTCATTG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFPNTFS*SSVMSL
Trigger: CAATGACATCACTGAGCTGCAGGAAAAGGTGTTCGG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCTGTGCCTGGCCCCATaGACTATTTTCAACAGCATA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFLCLAP*TIFNSI
Trigger: TATGCTGTTGAAAATAGTGCATGGGGCCAGGCACAG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGAGAGCAGGGGCGTTTaGACCACCTGCGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKESRGV*TTCGVR
Trigger: CCGGACACCGCAGGTGGTGCAAACGCCCCTGCTCTC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACAGGAGATGGTCCCATaGGTCCCATTGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKQEMVP*VPLSPV
Trigger: CACGGGGCTCAATGGGACCCATGGGACCATCTCCTG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAGAACCAGGGGGTCCTaGAGACCCTCTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPRTRGS*RPSGPR
Trigger: CCTGGGCCCAGAGGGTCTCCAGGACCCCCTGGTTCT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGAACCAGGGGGTCCTaGAGACCCTCTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRTRGS*RPSGPR
Trigger: CCTGGGCCCAGAGGGTCTCCAGGACCCCCTGGTTCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTGTCTCAGTTCTTCTTaGATGGTCATCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFCLSSS*MVISRA
Trigger: GGCTCTGGAGATGACCATCCAAGAAGAACTGAGACA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTGGTGGCAAGCTTGGTTaGCTCCAGACAAAAACTTGT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFGGKLG*LQTKTC
Trigger: ACAAGTTTTTGTCTGGAGCCAACCAAGCTTGCCACC...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTGTTGGTGGCAAGCTTaGTTGGCTCCAGACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFCWWQA*LAPDKN
Trigger: GTTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCATAACCACTGTGCCTaGCCCCATGCACTATTTTCA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFHNHCA*PHALFS
Trigger: TGAAAATAGTGCATGGGGCCAGGCACAGTGGTTATG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CAA 72 bp CAGCAACCTCCTTGCAGACTTCAGCCCCACTGTATATaGGTTCAGCCTGGATCATGGCACCTAATGGTACCT +
Preference number: 4 (lower is better)
Translates to: QQPPCRLQPHCI*VQPGSWHLMVP
Trigger: AGGTACCATTAGGTGCCATGATCCAGGCTGAACCAATATACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTCTCTTCCTTTGGCGTaGCGGTGTTGGGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSLPLA*RCWDVL
Trigger: TAGCACATCCCAACACCGTCACGCCAAAGGAAGAGA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTGTGGCCCTCTGTCATaGATGTTGAATTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFCGPLS*MLNFAE
Trigger: CTCTGCAAAATTCAACATTCATGACAGAGGGCCACA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTCCTGTAGCATGTGGTaGGCTCGCCTGAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSCSMW*ARLKTS
Trigger: TGAAGTCTTCAGGCGAGCTCACCACATGCTACAGGA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCACACAGCGTCCCATTaGTGCTGGCACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGHTASH*CWHTHQ
Trigger: TTGATGAGTGTGCCAGCAGCAATGGGACGCTGTGTG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACTTGCCCAGGTCAGCTaGATTGTTGGGGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKLAQVS*IVGEQS
Trigger: GCTCTGCTCCCCAACAATGCAGCTGACCTGGGCAAG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATCACTCCCTCATGTCTaGAGGCCTAGGAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSLPHV*RPRRGL
Trigger: GAGTCCCCTCCTAGGCCTGCAGACATGAGGGAGTGA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAGGCACCATTCTCTCTaGAGCCCCACTCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCRHHSL*SPTHFW
Trigger: CCAAAAGTGAGTGGGGCTGCAGAGAGAATGGTGCCT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTGGCCAAAGCCAGGGTaGTCTTCGCTGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGWPKPG*SSLVFG
Trigger: ACCAAATACCAGCGAAGAGCACCCTGGCTTTGGCCA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGGAGAAGCCCTCCCTTaGATACCTGGGAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKGEALP*IPGNRA
Trigger: AGCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCTGCCCAGGAGGGCCTaGCATACCGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYLPRRA*HTGEAW
Trigger: CCAGGCTTCCCCGGTATGCCAGGCCCTCCTGGGCAG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCAGGAGATGGTCCCATaGGTCCCATTGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFQEMVP*VPLSPV
Trigger: CACGGGGCTCAATGGGACCCATGGGACCATCTCCTG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCAGGTCCATGGCTTCTaGGTAGCTGGGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCQVHGF*VAGKFL
Trigger: CAGGAATTTCCCAGCTACCCAGAAGCCATGGACCTG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGACAGGGTTTCACTGTaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCDRVSL*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCACAGTGAAACCCTGTC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTTCGCTGGTATTTGGTaGGGTAATACTCACCTTTCC +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFFAGIW*GNTHLS
Trigger: GGAAAGGTGAGTATTACCCCACCAAATACCAGCGAA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCCTCCCTTGCATACCTaGGAACAGGGCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFPPLHT*EQGSPG
Trigger: GCCTGGTGAGCCCTGTTCCCAGGTATGCAAGGGAGG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCAGAAATGTCTGGCCTaGAGAAGCCCTCCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCQKCLA*RSPPLH
Trigger: ATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CAA 72 bp AATCCACAGCAAACCTTGGCAGGAACATGCTTCCCTTaGCCACCCAGAGGTGCTCTGAGAAAACACTCTAAC +
Preference number: 4 (lower is better)
Translates to: NPQQTLAGTCFP*PPRGALRKHSN
Trigger: GTTAGAGTGTTTTCTCAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTTTCCTGCAGCTCAGTaGTGTCATTGCGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGFPAAQ*CHCGCQ
Trigger: CTGACATCCGCAATGACATCACTGAGCTGCAGGAAA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATCCTCTGCTGAAGAGTaGGTCCGGTGCCCGAACACC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSSAEE*VRCPNT
Trigger: GGTGTTCGGGCACCGGACTCACTCTTCAGCAGAGGA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGGGAACTCCTCTGCTaGAGAGTGAGTCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRELLC*RVSPVP
Trigger: GGGCACCGGACTCACTCTTCAGCAGAGGAGTTCCCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAAGGGAACTCCTCTGCTaGAGAGTGAGTCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKRELLC*RVSPVP
Trigger: GGGCACCGGACTCACTCTTCAGCAGAGGAGTTCCCT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAACTGGTCTCGATCTCCTaGCCTTGTGATCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKLVSIS*PCDLPA
Trigger: GGCGGGGAGATCACAAGGTCAGGAGATCGAGACCAG...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGCCCAGACTGGCCTTaGACTCCTGGGCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKCPDWP*TPGLKG
Trigger: TCCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCATGGTCTTGATCTCCTaGCCTCATGATGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFMVLIS*PHDAPA
Trigger: GGCGGGCGCATCATGAGGTCAGGAGATCAAGACCAT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGGCCCACAGCAATTATaGACCTTGGAAAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGGPQQL*TLERWP
Trigger: TGGCCATCTTTCCAAGGTTCATAATTGCTGTGGGCC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAAGTTGTCCGTGCACTaGTGTTCACAGGGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKKLSVH*CSQGAS
Trigger: CGAGGCTCCCTGTGAACAGCAGTGCACGGACAACTT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTAGCAGAGCAATCTTTTaGTTCAGCTGCAGCACGGTC +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGSRAIF*FSCSTV
Trigger: GACCGTGCTGCAGCTGAAGCAAAAGATTGCTCTGCT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGGGCCCCTCCGGCCTTaGTTAATGTGGGACAGATCA +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFGPLRP*LMWDRS
Trigger: TGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTACCTTCTGGGCACCTaGTCAGAACCAGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGYLLGT*SEPGIL
Trigger: CAGAATTCCTGGTTCTGAGCAGGTGCCCAGAAGGTA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCGGCCTTGCTTAATGTaGGACAGATCAGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGRPCLM*DRSGDG
Trigger: ACCATCTCCTGATCTGTCCCACATTAAGCAAGGCCG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTCTTCCTGGTGCCCCTaGTGGACCCACAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSSWCP*WTHRAP
Trigger: AGGGGCCCTGTGGGTCCACCAGGGGCACCAGGAAGA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAGAACCATCTCTTCCTaGTGCCCCTGGTGGACCCAC +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFRTISS*CPWWTH
Trigger: GTGGGTCCACCAGGGGCACCAGGAAGAGATGGTTCT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCAGAGCCCAGGTCCATaGCTTCTGGGTAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFQSPGP*LLGSWE
Trigger: TTCCCAGCTACCCAGAAGCCATGGACCTGGGCTCTG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTAAATGGGAAAGGACATaGCAGGATGGGAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFKWERT*QDGKFQ
Trigger: TTGGAATTTCCCATCCTGCCATGTCCTTTCCCATTT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAACCCGTGGTTGGTGTaGCCCTCTGTCATGAATGTT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCNPWLV*PSVMNV
Trigger: AACATTCATGACAGAGGGCCACACCAACCACGGGTT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTATAATTTCTCCCTCTaGAACTGGGAAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGYNFSL*NWEGRG
Trigger: CCCCCTCCCTTCCCAGTTCCAGAGGGAGAAATTATA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCTTGCTTTGATCCCCTaGGGAGTAAGAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCLALIP*GVRGSF
Trigger: AAAGGACCCTCTTACTCCCCAGGGGATCAAAGCAAG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAGCTGCCCAAGGTATTaGTGCAGATGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSCPRY*CRCGHT
Trigger: TGTGTGCCCACATCTGCATCAATACCTTGGGCAGCT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAGAGAGAGTGGGGAATaGCACCCAAAATATGATGGG +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCRESGE*HPKYDG
Trigger: CCCATCATATTTTGGGTGTCATTCCCCACTCTCTCT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTTCTGGGGCACAGGCTaGGAAGTGGGGAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVFWGTG*EVGRES
Trigger: ACTCTCTCTCCCCACTTCTCAGCCTGTGCCCCAGAA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTTCAGGAAGGTTATTTaGCAGATGTTAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFFRKVI*QMLSLQ
Trigger: CTGCAGACTTAACATCTGTCAAATAACCTTCCTGAA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATCCTGTAGCATGTGGTaGGCTCGCCTGAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSCSMW*ARLKTS
Trigger: TGAAGTCTTCAGGCGAGCTCACCACATGCTACAGGA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTATCTTTTGCTTCAGCTaGAGCACGGTCTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGIFCFS*STVCFI
Trigger: GATGAAGCAGACCGTGCTGCAGCTGAAGCAAAAGAT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACTTGCCCAGGTCAGCTaGATTGTTGGGGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPLAQVS*IVGEQS
Trigger: GCTCTGCTCCCCAACAATGCAGCTGACCTGGGCAAG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATCACTCCCTCATGTCTaGAGGCCTAGGAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSLPHV*RPRRGL
Trigger: GAGTCCCCTCCTAGGCCTGCAGACATGAGGGAGTGA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCTGTGCCTGGCCCCATaGACTATTTTCAACAGCATA +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCLCLAP*TIFNSI
Trigger: TATGCTGTTGAAAATAGTGCATGGGGCCAGGCACAG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAGGCACCATTCTCTCTaGAGCCCCACTCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKRHHSL*SPTHFW
Trigger: CCAAAAGTGAGTGGGGCTGCAGAGAGAATGGTGCCT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGGAGAAGCCCTCCCTTaGATACCTGGGAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKGEALP*IPGNRA
Trigger: AGCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGTCAGCTGCATTGTTaGGGAGCAGAGCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGQLHC*GAEQSF
Trigger: AAAAGATTGCTCTGCTCCCCAACAATGCAGCTGACC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAAGAACCATCTCTTCCTaGTGCCCCTGGTGGACCCAC +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKRTISS*CPWWTH
Trigger: GTGGGTCCACCAGGGGCACCAGGAAGAGATGGTTCT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGTTCAGCCTGGATCATaGCACCTAATGGTACCTTCT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCVQPGS*HLMVPS
Trigger: AGAAGGTACCATTAGGTGCCATGATCCAGGCTGAAC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGTTCAGCCTGGATCATaGCACCTAATGGTACCTTCT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGVQPGS*HLMVPS
Trigger: AGAAGGTACCATTAGGTGCCATGATCCAGGCTGAAC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGTGGCAAGCTTGGTTaGCTCCAGACAAAAACTTGT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGGKLG*LQTKTC
Trigger: ACAAGTTTTTGTCTGGAGCCAACCAAGCTTGCCACC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTATCCACAGCAAACCTTaGCAGGAACATGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCIHSKP*QEHASL
Trigger: AAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGAT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGACAGGGTTTCACTGTaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKDRVSL*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCACAGTGAAACCCTGTC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAACCTACAGAAATGTCTaGCCTGGAGAAGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKTYRNV*PGEALP
Trigger: AGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAGAATGAGGCTGCTGTaGTTGTTTCTGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKRMRLL*LFLGHR
Trigger: CCTGTGCCCCAGAAACAACCACAGCAGCCTCATTCT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTGGAAGGTAGGTGTTTaGGGCCAGCACCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVWKVGV*GQHLVT
Trigger: GGTGACAAGGTGCTGGCCTCAAACACCTACCTTCCA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAGGGAACTCCTCTGCTaGAGAGTGAGTCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYRELLC*RVSPVP
Trigger: GGGCACCGGACTCACTCTTCAGCAGAGGAGTTCCCT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACACCCAGAGGTGCTCTaGGAAAACACTCTAACTCAC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKHPEVL*ENTLTH
Trigger: GTGAGTTAGAGTGTTTTCTCAGAGCACCTCTGGGTG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTCATTTGCAGGAGAGTaGAAATCTCCCGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSFAGE*KSPAKV
Trigger: TACCTTTGCGGGAGATTTTCACTCTCCTGCAAATGA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCTGGTCTCGATCTCCTaGCCTTGTGATCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLVSIS*PCDLPA
Trigger: GGCGGGGAGATCACAAGGTCAGGAGATCGAGACCAG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTGCCCAGACTGGCCTTaGACTCCTGGGCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYCPDWP*TPGLKG
Trigger: TCCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCTTGGTCCAGCAGATTaGCATTATAAAATACAGGTT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFLGPAD*HYKIQV
Trigger: AACCTGTATTTTATAATGTCAATCTGCTGGACCAAG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTTTCCCTATAAAACATaGAATGACCTAGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFFPYKT*NDLEAL
Trigger: CAGTGCTTCTAGGTCATTTCATGTTTTATAGGGAAA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGGCCAAAGTTGTCCGTaGACTGCTGTTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVGQSCP*TAVHRE
Trigger: CTCCCTGTGAACAGCAGTGCACGGACAACTTTGGCC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGCCAGCAACCTCCTTaGAGACTTCAGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVSQQPP*RLQPHC
Trigger: ACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAATATCCAGACAGTATaGCTTCTCCCGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKNIQTV*LLPLPV
Trigger: CACCGGAAGCGGGAGAAGCCATACTGTCTGGATATT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACATGGCCAGTGTCATTaGGATATTTGTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKHGQCH*DICLPW
Trigger: CCAGGGGAGACAAATATCCCAATGACACTGGCCATG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCAGGAGATGGTCCCATaGGTCCCATTGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYQEMVP*VPLSPV
Trigger: CACGGGGCTCAATGGGACCCATGGGACCATCTCCTG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAATGGGTAGAAGTCTCTaGGGGCTCTCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKMGRSL*GLSSLL
Trigger: CAAGAGACTTGAGAGCCCCCAGAGACTTCTACCCAT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCCTAATGGTACCTTCTaGGCACCTGCTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFPNGTF*APAQNQ
Trigger: CTGGTTCTGAGCAGGTGCCCAGAAGGTACCATTAGG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCTCTCTATAAACCCGTaGTTGGTGTGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFLSINP*LVWPSV
Trigger: GACAGAGGGCCACACCAACCACGGGTTTATAGAGAG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTATTATTCTAGCCTATaGCCAAACATGCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFYYSSL*PNMQFG
Trigger: ACCAAACTGCATGTTTGGCCATAGGCTAGAATAATA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCTCTTCGCTGGTATTTaGTGGGGTAATACTCACCTT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGLFAGI*WGNTHL
Trigger: AAGGTGAGTATTACCCCACCAAATACCAGCGAAGAG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCACCTACAGAAATGTCTaGCCTGGAGAAGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFTYRNV*PGEALP
Trigger: AGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAGAATGAGGCTGCTGTaGTTGTTTCTGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFRMRLL*LFLGHR
Trigger: CCTGTGCCCCAGAAACAACCACAGCAGCCTCATTCT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAAGCTGCCCAAGGTATTaGTGCAGATGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKSCPRY*CRCGHT
Trigger: TGTGTGCCCACATCTGCATCAATACCTTGGGCAGCT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATCTCTTCCTTTGGCGTaGCGGTGTTGGGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSLPLA*RCWDVL
Trigger: TAGCACATCCCAACACCGTCACGCCAAAGGAAGAGA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTGGTTTAACTGCAGGTaGGTTGATCTTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCWFNCR*VDLSLP
Trigger: AGGAAGAGAAAGATCAACTCACCTGCAGTTAAACCA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCAGATAAGCATGGCATaGAACCTTAAGCACCGTATT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCQISMA*NLKHRI
Trigger: AATACGGTGCTTAAGGTTTCATGCCATGCTTATCTG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCACCCAGAGGTGCTCTaGGAAAACACTCTAACTCAC +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFHPEVL*ENTLTH
Trigger: GTGAGTTAGAGTGTTTTCTCAGAGCACCTCTGGGTG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACGGTCACATGCTGACTaGCATGAGTCCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPRSHAD*HESCIS
Trigger: GGAAATGCAGGACTCATGTCAGTCAGCATGTGACCG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACATGGTCTTGATCTCCTaGCCTCATGATGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYMVLIS*PHDAPA
Trigger: GGCGGGCGCATCATGAGGTCAGGAGATCAAGACCAT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGGCCCACAGCAATTATaGACCTTGGAAAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFGPQQL*TLERWP
Trigger: TGGCCATCTTTCCAAGGTTCATAATTGCTGTGGGCC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGGGGGAGTTGCTACCTaGAAACCTACAGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKGGVAT*KPTEMS
Trigger: AGACATTTCTGTAGGTTTTCAGGTAGCAACTCCCCC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTTCTGGGGCACAGGCTaGGAAGTGGGGAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYFWGTG*EVGRES
Trigger: ACTCTCTCTCCCCACTTCTCAGCCTGTGCCCCAGAA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGTTAAGTCTGCAGAATaGGGCTGCTGTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKVKSAE*GCCGCF
Trigger: GAAACAACCACAGCAGCCTCATTCTGCAGACTTAAC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACGCGATTTTGCTCTCTaGGCAGATTTCTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPRDFAL*ADFSVA
Trigger: GGCGACAGAGAAATCTGCTCAGAGAGCAAAATCGCG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAACAGCGTCCCATTGCTaGTGGCACACTCATCAATAT +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKTASHC*WHTHQY
Trigger: ATATTGATGAGTGTGCCAGCAGCAATGGGACGCTGT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAACACACAGCGTCCCATTaGTGCTGGCACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKHTASH*CWHTHQ
Trigger: TTGATGAGTGTGCCAGCAGCAATGGGACGCTGTGTG...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACACACAGCGTCCCATTaGTGCTGGCACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPHTASH*CWHTHQ
Trigger: TTGATGAGTGTGCCAGCAGCAATGGGACGCTGTGTG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTACCTTCTGGGCACCTaGTCAGAACCAGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFYLLGT*SEPGIL
Trigger: CAGAATTCCTGGTTCTGAGCAGGTGCCCAGAAGGTA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAACCTTGGCAGGAACATaGTTCCCTTTGCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKTLAGT*FPLPPR
Trigger: TCTGGGTGGCAAAGGGAAGCATGTTCCTGCCAAGGT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCTCTCATACAGCTTGTaGATAGTTTTGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFLSYSL*IVLCVF
Trigger: AAAAACACACAAAACTATGCACAAGCTGTATGAGAG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTGGTTACCATAAGTTTTaGTGGAGAATATTATCTGGA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFGYHKF*WRILSG
Trigger: TCCAGATAATATTCTCCAGCAAAACTTATGGTAACC...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTAGTACATATCAGTCTTaGAGTAGTCCAAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFSTYQS*SSPSFE
Trigger: TTCAAAACTTGGACTACTGCAAGACTGATATGTACT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTTTCCTAAACTAAAATaGATGCCCTCCATGTACTAT +
Preference number: 4 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFFPKLK*MPSMYY
Trigger: ATAGTACATGGAGGGCATGCATTTTAGTTTAGGAAA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGGCACCATTCTCTCTaGAGCCCCACTCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRHHSL*SPTHFW
Trigger: CCAAAAGTGAGTGGGGCTGCAGAGAGAATGGTGCCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGGCCAAAGCCAGGGTaGTCTTCGCTGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKWPKPG*SSLVFG
Trigger: ACCAAATACCAGCGAAGAGCACCCTGGCTTTGGCCA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGAGAAGCCCTCCCTTaGATACCTGGGAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGEALP*IPGNRA
Trigger: AGCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGCGTCCCATTGCTGCTaGCACACTCATCAATATCCA +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFASHCC*HTHQYP
Trigger: TGGATATTGATGAGTGTGCCAGCAGCAATGGGACGC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGATATTTGTCTCCCCTaGTACATGTCTTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGDICLP*YMSSHH
Trigger: ATGATGGGAAGACATGTACCAGGGGAGACAAATATC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGATATTTGTCTCCCCTaGTACATGTCTTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCDICLP*YMSSHH
Trigger: ATGATGGGAAGACATGTACCAGGGGAGACAAATATC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTTCTCAGACTTCTCATaGCCAGTGTCATTGGGATAT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGFSDFS*PVSLGY
Trigger: ATATCCCAATGACACTGGCCATGAGAAGTCTGAGAA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGGTCAGCTGCATTGTTaGGGAGCAGAGCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKGQLHC*GAEQSF
Trigger: AAAAGATTGCTCTGCTCCCCAACAATGCAGCTGACC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGAACCATCTCTTCCTaGTGCCCCTGGTGGACCCAC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYRTISS*CPWWTH
Trigger: GTGGGTCCACCAGGGGCACCAGGAAGAGATGGTTCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATGGCTTCTGGGTAGCTaGGAAATTCCTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKWLLGS*EIPEVK
Trigger: CTTTACCTCAGGAATTTCCCAGCTACCCAGAAGCCA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAACAGGTCCATGGCTTCTaGGTAGCTGGGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKQVHGF*VAGKFL
Trigger: CAGGAATTTCCCAGCTACCCAGAAGCCATGGACCTG...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATGCAAACCACCCCAATaGACTCTTAGTGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKCKPPQ*TLSEKQ
Trigger: CTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTATATTGGTTCAGCCTaGATCATGGCACCTAATGGT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGYIGSA*IMAPNG
Trigger: ACCATTAGGTGCCATGATCCAGGCTGAACCAATATA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAGCCCCACTGTATATTaGTTCAGCCTGGATCATGGC +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFSPTVY*FSLDHG
Trigger: GCCATGATCCAGGCTGAACCAATATACAGTGGGGCT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAGCAGATCATCCTTCTaGTCTCTTGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFSRSSF*SLAPGA
Trigger: AGCACCAGGAGCAAGAGACCAGAAGGATGATCTGCT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAACCCGTGGTTGGTGTaGCCCTCTGTCATGAATGTT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFNPWLV*PSVMNV
Trigger: AACATTCATGACAGAGGGCCACACCAACCACGGGTT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACTCTCTATAAACCCGTaGTTGGTGTGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPLSINP*LVWPSV
Trigger: GACAGAGGGCCACACCAACCACGGGTTTATAGAGAG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACATAACCACTGTGCCTaGCCCCATGCACTATTTTCA +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKHNHCA*PHALFS
Trigger: TGAAAATAGTGCATGGGGCCAGGCACAGTGGTTATG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTATAATTTCTCCCTCTaGAACTGGGAAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFYNFSL*NWEGRG
Trigger: CCCCCTCCCTTCCCAGTTCCAGAGGGAGAAATTATA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAGCAATTATGAACCTTaGAAAGATGGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSNYEP*KDGQSQ
Trigger: CTGGCTTTGGCCATCTTTCCAAGGTTCATAATTGCT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCAGAAATGTCTGGCCTaGAGAAGCCCTCCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVQKCLA*RSPPLH
Trigger: ATGCAAGGGAGGGCTTCTCCAGGCCAGACATTTCTG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTACCTACAGAAATGTCTaGCCTGGAGAAGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVTYRNV*PGEALP
Trigger: AGGGAGGGCTTCTCCAGGCCAGACATTTCTGTAGGT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGAATGAGGCTGCTGTaGTTGTTTCTGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRMRLL*LFLGHR
Trigger: CCTGTGCCCCAGAAACAACCACAGCAGCCTCATTCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CAA 72 bp AACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTaGGTGTGGCCCTCTGTCATGAATGTTGAATTTTGC +
Preference number: 4 (lower is better)
Translates to: NSCSVPLSINPW*VWPSVMNVEFC
Trigger: GCAAAATTCAACATTCATGACAGAGGGCCACACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTGGGAAATTCCAACATaGGCTAATATGAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCWEIPT*ANMSVR
Trigger: TCTCACACTCATATTAGCTCATGTTGGAATTTCCCA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGGTCAGGATGGTCTTaGTCTCCTGACCTCATGATG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKWSGWS*SPDLMM
Trigger: CATCATGAGGTCAGGAGATCAAGACCATCCTGACCA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTGGTCAGGATGGTCTTaGTCTCCTGACCTCATGATG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVWSGWS*SPDLMM
Trigger: CATCATGAGGTCAGGAGATCAAGACCATCCTGACCA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAACTTCCTTTGGTCAATaGATCCAATGGCAGATGTCG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKTSFGQ*IQWQMS
Trigger: CGACATCTGCCATTGGATTCATTGACCAAAGGAAGT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCATGACACCCAAAATATaGTGGGGGAGTTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFMTPKI*WGSCYL
Trigger: CAGGTAGCAACTCCCCCATCATATTTTGGGTGTCAT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTGTGGTGAGCTCGCCTaGAGACTTCAGACACGGGTA +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYCGELA*RLQTRV
Trigger: TACCCGTGTCTGAAGTCTTCAGGCGAGCTCACCACA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGGCCAAAGTTGTCCGTaGACTGCTGTTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYGQSCP*TAVHRE
Trigger: CTCCCTGTGAACAGCAGTGCACGGACAACTTTGGCC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCACAGCGTCCCATTGCTaGTGGCACACTCATCAATAT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFTASHC*WHTHQY
Trigger: ATATTGATGAGTGTGCCAGCAGCAATGGGACGCTGT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGCCAGCAACCTCCTTaGAGACTTCAGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSQQPP*RLQPHC
Trigger: ACAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGACCTTTTTCTGAACTaGTTCTCACATGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKDLFLN*FSHAGE
Trigger: TTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAATATCCAGACAGTATaGCTTCTCCCGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPNIQTV*LLPLPV
Trigger: CACCGGAAGCGGGAGAAGCCATACTGTCTGGATATT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAAATATCCAGACAGTATaGCTTCTCCCGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKNIQTV*LLPLPV
Trigger: CACCGGAAGCGGGAGAAGCCATACTGTCTGGATATT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACATGGCCAGTGTCATTaGGATATTTGTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPHGQCH*DICLPW
Trigger: CCAGGGGAGACAAATATCCCAATGACACTGGCCATG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGAACTCCTTGCATGTaGCACAGCAAGTTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRTPCM*HSKFRL
Trigger: AAGCCGGAACTTGCTGTGCCACATGCAAGGAGTTCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGGTCAGCTGCATTGTTaGGGAGCAGAGCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFGQLHC*GAEQSF
Trigger: AAAAGATTGCTCTGCTCCCCAACAATGCAGCTGACC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCGGCCTTGCTTAATGTaGGACAGATCAGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRPCLM*DRSGDG
Trigger: ACCATCTCCTGATCTGTCCCACATTAAGCAAGGCCG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATCAGTTCTTCTTGGATaGTCATCTCCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKSVLLG*SSPEPR
Trigger: CCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAATGGGTAGAAGTCTCTaGGGGCTCTCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPMGRSL*GLSSLL
Trigger: CAAGAGACTTGAGAGCCCCCAGAGACTTCTACCCAT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATGGGTAGAAGTCTCTaGGGGCTCTCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVMGRSL*GLSSLL
Trigger: CAAGAGACTTGAGAGCCCCCAGAGACTTCTACCCAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGCCCCACTGTATATTaGTTCAGCCTGGATCATGGC +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVSPTVY*FSLDHG
Trigger: GCCATGATCCAGGCTGAACCAATATACAGTGGGGCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCATAACCACTGTGCCTaGCCCCATGCACTATTTTCA +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFHNHCA*PHALFS
Trigger: TGAAAATAGTGCATGGGGCCAGGCACAGTGGTTATG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATATAATTTCTCCCTCTaGAACTGGGAAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPYNFSL*NWEGRG
Trigger: CCCCCTCCCTTCCCAGTTCCAGAGGGAGAAATTATA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTACTTGTTGTTTGGCCTaGATTCCTCCAATAACTTTC +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGTCCLA*IPPITF
Trigger: GAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCTTGCTTTGATCCCCTaGGGAGTAAGAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVLALIP*GVRGSF
Trigger: AAAGGACCCTCTTACTCCCCAGGGGATCAAAGCAAG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGCTGCCCAAGGTATTaGTGCAGATGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSCPRY*CRCGHT
Trigger: TGTGTGCCCACATCTGCATCAATACCTTGGGCAGCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGCACCTTGTCACCAGTaGTATACTTGCCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYAPCHQ*YTCPGQ
Trigger: CTGACCTGGGCAAGTATATCACTGGTGACAAGGTGC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGCACCTTGTCACCAGTaGTATACTTGCCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYAPCHQ*YTCPGQ
Trigger: CTGACCTGGGCAAGTATATCACTGGTGACAAGGTGC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTCTCTTCCTTTGGCGTaGCGGTGTTGGGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSLPLA*RCWDVL
Trigger: TAGCACATCCCAACACCGTCACGCCAAAGGAAGAGA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACTTAAGGAAGAAGACTaGAAGGTGGCATTCAAACAC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKLKEED*KVAFKH
Trigger: GTGTTTGAATGCCACCTTTCAGTCTTCTTCCTTAAG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCGGTCACATGCTGACTaGCATGAGTCCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYRSHAD*HESCIS
Trigger: GGAAATGCAGGACTCATGTCAGTCAGCATGTGACCG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGGAGCAAAGTGTTCATaGAAGACTCGGTCACATGCT +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPGAKCS*KTRSHA
Trigger: AGCATGTGACCGAGTCTTTCATGAACACTTTGCTCC...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGGAGCAAAGTGTTCATaGAAGACTCGGTCACATGCT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKGAKCS*KTRSHA
Trigger: AGCATGTGACCGAGTCTTTCATGAACACTTTGCTCC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGAATTTTGCATAAATaGGACATAGAGGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGILHK*DIEEQS
Trigger: ACTTTGCTCCTCTATGTCTCATTTATGCAAAATTCC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTCTGGAATAGTTTCATaGAACCCAGACAATACTACT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSGIVS*NPDNTT
Trigger: AGTAGTATTGTCTGGGTTTCATGAAACTATTCCAGA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTTTCCCTATAAAACATaGAATGACCTAGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGFPYKT*NDLEAL
Trigger: CAGTGCTTCTAGGTCATTTCATGTTTTATAGGGAAA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGGGGGAGTTGCTACCTaGAAACCTACAGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKGGVAT*KPTEMS
Trigger: AGACATTTCTGTAGGTTTTCAGGTAGCAACTCCCCC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATGACACCCAAAATATaGTGGGGGAGTTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVMTPKI*WGSCYL
Trigger: CAGGTAGCAACTCCCCCATCATATTTTGGGTGTCAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGAGAGAGTGGGGAATaGCACCCAAAATATGATGGG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRESGE*HPKYDG
Trigger: CCCATCATATTTTGGGTGTCATTCCCCACTCTCTCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGTTAAGTCTGCAGAATaGGGCTGCTGTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKVKSAE*GCCGCF
Trigger: GAAACAACCACAGCAGCCTCATTCTGCAGACTTAAC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATCTGGTAGAACTCCTTaGATGTGGCACAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSGRTP*MWHSKF
Trigger: GAACTTGCTGTGCCACATGCAAGGAGTTCTACCAGA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATACCTTGGCAGGAACATaGTTCCCTTTGCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYTLAGT*FPLPPR
Trigger: TCTGGGTGGCAAAGGGAAGCATGTTCCTGCCAAGGT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGTGAGAACGATCATTTaGAGGAGAGTGAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKVRTII*RRVKIS
Trigger: GGAGATTTTCACTCTCCTGCAAATGATCGTTCTCAC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTGGCCAAAGCCAGGGTaGTCTTCGCTGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYWPKPG*SSLVFG
Trigger: ACCAAATACCAGCGAAGAGCACCCTGGCTTTGGCCA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTGGCTTCTGGGTAGCTaGGAAATTCCTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVWLLGS*EIPEVK
Trigger: CTTTACCTCAGGAATTTCCCAGCTACCCAGAAGCCA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGTCTCAGTTCTTCTTaGATGGTCATCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKCLSSS*MVISRA
Trigger: GGCTCTGGAGATGACCATCCAAGAAGAACTGAGACA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATCTTTCTCTTCCTTTaGCGTGACGGTGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVIFLFL*RDGVGM
Trigger: CATCCCAACACCGTCACGCCAAAGGAAGAGAAAGAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAATCTTTCTCTTCCTTTaGCGTGACGGTGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKIFLFL*RDGVGM
Trigger: CATCCCAACACCGTCACGCCAAAGGAAGAGAAAGAT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATGCAAACCACCCCAATaGACTCTTAGTGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPCKPPQ*TLSEKQ
Trigger: CTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGGTGGCAAGCTTGGTTaGCTCCAGACAAAAACTTGT +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPGGKLG*LQTKTC
Trigger: ACAAGTTTTTGTCTGGAGCCAACCAAGCTTGCCACC...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGTTGGTGGCAAGCTTaGTTGGCTCCAGACAAAAAC +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKCWWQA*LAPDKN
Trigger: GTTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACTCTCAATATGTTGGTaGCAAGCTTGGTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPLSICW*QAWLAP
Trigger: TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATCCACAGCAAACCTTaGCAGGAACATGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVIHSKP*QEHASL
Trigger: AAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAAATGGGAAAGGACATaGCAGGATGGGAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKKWERT*QDGKFQ
Trigger: TTGGAATTTCCCATCCTGCCATGTCCTTTCCCATTT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGACAGGGTTTCACTGTaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYDRVSL*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCACAGTGAAACCCTGTC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCTCTCTATAAACCCGTaGTTGGTGTGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYLSINP*LVWPSV
Trigger: GACAGAGGGCCACACCAACCACGGGTTTATAGAGAG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTTTCCTGCAGCTCAGTaGTGTCATTGCGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYFPAAQ*CHCGCQ
Trigger: CTGACATCCGCAATGACATCACTGAGCTGCAGGAAA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGTGGCCCTCTGTCATaGATGTTGAATTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKCGPLS*MLNFAE
Trigger: CTCTGCAAAATTCAACATTCATGACAGAGGGCCACA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGCCCACAGCAATTATaGACCTTGGAAAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGPQQL*TLERWP
Trigger: TGGCCATCTTTCCAAGGTTCATAATTGCTGTGGGCC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATTCAGGAAGGTTATTTaGCAGATGTTAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKFRKVI*QMLSLQ
Trigger: CTGCAGACTTAACATCTGTCAAATAACCTTCCTGAA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGCAGAGCAATCTTTTaGTTCAGCTGCAGCACGGTC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSRAIF*FSCSTV
Trigger: GACCGTGCTGCAGCTGAAGCAAAAGATTGCTCTGCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACCTTTTTCTGAACTaGTTCTCACATGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPDLFLN*FSHAGE
Trigger: TTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTC...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTTTCCTAAACTAAAATaGATGCCCTCCATGTACTAT +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGFPKLK*MPSMYY
Trigger: ATAGTACATGGAGGGCATGCATTTTAGTTTAGGAAA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGCGTCCCATTGCTGCTaGCACACTCATCAATATCCA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYASHCC*HTHQYP
Trigger: TGGATATTGATGAGTGTGCCAGCAGCAATGGGACGC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCATGGCCAGTGTCATTaGGATATTTGTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYHGQCH*DICLPW
Trigger: CCAGGGGAGACAAATATCCCAATGACACTGGCCATG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGAACTCCTTGCATGTaGCACAGCAAGTTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYRTPCM*HSKFRL
Trigger: AAGCCGGAACTTGCTGTGCCACATGCAAGGAGTTCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTCAGTTCTTCTTGGATaGTCATCTCCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSVLLG*SSPEPR
Trigger: CCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTATACTAGAGGAGTTATaGTCTATTGTGAACACACAT +
Preference number: 4 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCILEEL*SIVNTH
Trigger: ATGTGTGTTCACAATAGACCATAACTCCTCTAGTAT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTATATTGGTTCAGCCTaGATCATGGCACCTAATGGT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFYIGSA*IMAPNG
Trigger: ACCATTAGGTGCCATGATCCAGGCTGAACCAATATA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGCCCCACTGTATATTaGTTCAGCCTGGATCATGGC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSPTVY*FSLDHG
Trigger: GCCATGATCCAGGCTGAACCAATATACAGTGGGGCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCTGGAGAATATTATCTaGAATAGTTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGLENII*NSFMKP
Trigger: GGGTTTCATGAAACTATTCCAGATAATATTCTCCAG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATTCGCTGGTATTTGGTaGGGTAATACTCACCTTTCC +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKFAGIW*GNTHLS
Trigger: GGAAAGGTGAGTATTACCCCACCAAATACCAGCGAA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAACTTGTTGTTTGGCCTaGATTCCTCCAATAACTTTC +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKTCCLA*IPPITF
Trigger: GAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCTTGCTTTGATCCCCTaGGGAGTAAGAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYLALIP*GVRGSF
Trigger: AAAGGACCCTCTTACTCCCCAGGGGATCAAAGCAAG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGGTTTAACTGCAGGTaGGTTGATCTTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKWFNCR*VDLSLP
Trigger: AGGAAGAGAAAGATCAACTCACCTGCAGTTAAACCA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAGTAGTGGAGTTAAATaGTGTGGGCTAAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSSGVK*CGLKGG
Trigger: TCCACCTTTTAGCCCACATCATTTAACTCCACTACT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCACTTAAGGAAGAAGACTaGAAGGTGGCATTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPLKEED*KVAFKH
Trigger: GTGTTTGAATGCCACCTTTCAGTCTTCTTCCTTAAG...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACATGACACCCAAAATATaGTGGGGGAGTTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYMTPKI*WGSCYL
Trigger: CAGGTAGCAACTCCCCCATCATATTTTGGGTGTCAT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGTTAAGTCTGCAGAATaGGGCTGCTGTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYVKSAE*GCCGCF
Trigger: GAAACAACCACAGCAGCCTCATTCTGCAGACTTAAC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACGTAATCTTCTGGGATaGATTGTCCAAGAACAAATT +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKRNLLG*IVQEQI
Trigger: AATTTGTTCTTGGACAATGCATCCCAGAAGATTACG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTCTGGTAGAACTCCTTaGATGTGGCACAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSGRTP*MWHSKF
Trigger: GAACTTGCTGTGCCACATGCAAGGAGTTCTACCAGA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCCGAACACCTTTTCCTaGAGCTCAGTGATGTCATTG +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYPNTFS*SSVMSL
Trigger: CAATGACATCACTGAGCTGCAGGAAAAGGTGTTCGG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGCCTATGGCCAAACATaGAGTTTGGTTGCATTTTAT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFAYGQT*SLVAFY
Trigger: ATAAAATGCAACCAAACTGCATGTTTGGCCATAGGC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCTGTGCCTGGCCCCATaGACTATTTTCAACAGCATA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYLCLAP*TIFNSI
Trigger: TATGCTGTTGAAAATAGTGCATGGGGCCAGGCACAG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAACGTCGTAATCTTCTaGGATGCATTGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPNVVIF*DALSKN
Trigger: GTTCTTGGACAATGCATCCCAGAAGATTACGACGTT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTTCTCAGACTTCTCATaGCCAGTGTCATTGGGATAT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVFSDFS*PVSLGY
Trigger: ATATCCCAATGACACTGGCCATGAGAAGTCTGAGAA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATTCTCAGACTTCTCATaGCCAGTGTCATTGGGATAT +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPFSDFS*PVSLGY
Trigger: ATATCCCAATGACACTGGCCATGAGAAGTCTGAGAA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTGGCTTCTGGGTAGCTaGGAAATTCCTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYWLLGS*EIPEVK
Trigger: CTTTACCTCAGGAATTTCCCAGCTACCCAGAAGCCA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTGTCTCAGTTCTTCTTaGATGGTCATCTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYCLSSS*MVISRA
Trigger: GGCTCTGGAGATGACCATCCAAGAAGAACTGAGACA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTGTTGGTGGCAAGCTTaGTTGGCTCCAGACAAAAAC +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYCWWQA*LAPDKN
Trigger: GTTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACATCCACAGCAAACCTTaGCAGGAACATGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYIHSKP*QEHASL
Trigger: AAGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGAT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGCAATTATGAACCTTaGAAAGATGGCCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVSNYEP*KDGQSQ
Trigger: CTGGCTTTGGCCATCTTTCCAAGGTTCATAATTGCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTCATTTGCAGGAGAGTaGAAATCTCCCGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSFAGE*KSPAKV
Trigger: TACCTTTGCGGGAGATTTTCACTCTCCTGCAAATGA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTGGGAAATTCCAACATaGGCTAATATGAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVWEIPT*ANMSVR
Trigger: TCTCACACTCATATTAGCTCATGTTGGAATTTCCCA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATGGGAAATTCCAACATaGGCTAATATGAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKWEIPT*ANMSVR
Trigger: TCTCACACTCATATTAGCTCATGTTGGAATTTCCCA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACACTTCCTTTGGTCAATaGATCCAATGGCAGATGTCG +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYTSFGQ*IQWQMS
Trigger: CGACATCTGCCATTGGATTCATTGACCAAAGGAAGT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATTCAGGAAGGTTATTTaGCAGATGTTAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKFRKVI*QMLSLQ
Trigger: CTGCAGACTTAACATCTGTCAAATAACCTTCCTGAA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGCCTATGGCCAAACATaGAGTTTGGTTGCATTTTAT +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPAYGQT*SLVAFY
Trigger: ATAAAATGCAACCAAACTGCATGTTTGGCCATAGGC...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGGTTACCATAAGTTTTaGTGGAGAATATTATCTGGA +
Preference number: 4 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKGYHKF*WRILSG
Trigger: TCCAGATAATATTCTCCAGCAAAACTTATGGTAACC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGCCAAACATGCAGTTTaGTTGCATTTTATGAGCATT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFAKHAV*LHFMSI
Trigger: AATGCTCATAAAATGCAACCAAACTGCATGTTTGGC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATCTCTTCGCTGGTATTTaGTGGGGTAATACTCACCTT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYLFAGI*WGNTHL
Trigger: AAGGTGAGTATTACCCCACCAAATACCAGCGAAGAG...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCTCTTCGCTGGTATTTaGTGGGGTAATACTCACCTT +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLFAGI*WGNTHL
Trigger: AAGGTGAGTATTACCCCACCAAATACCAGCGAAGAG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCAGATAAGCATGGCATaGAACCTTAAGCACCGTATT +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYQISMA*NLKHRI
Trigger: AATACGGTGCTTAAGGTTTCATGCCATGCTTATCTG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAGTAGTGGAGTTAAATaGTGTGGGCTAAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSSGVK*CGLKGG
Trigger: TCCACCTTTTAGCCCACATCATTTAACTCCACTACT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGGAATTTTGCATAAATaGGACATAGAGGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPGILHK*DIEEQS
Trigger: ACTTTGCTCCTCTATGTCTCATTTATGCAAAATTCC...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATCTGGAATAGTTTCATaGAACCCAGACAATACTACT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKSGIVS*NPDNTT
Trigger: AGTAGTATTGTCTGGGTTTCATGAAACTATTCCAGA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCTTGGTCCAGCAGATTaGCATTATAAAATACAGGTT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVLGPAD*HYKIQV
Trigger: AACCTGTATTTTATAATGTCAATCTGCTGGACCAAG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATTTCCCTATAAAACATaGAATGACCTAGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPFPYKT*NDLEAL
Trigger: CAGTGCTTCTAGGTCATTTCATGTTTTATAGGGAAA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAACGTAATCTTCTGGGATaGATTGTCCAAGAACAAATT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKRNLLG*IVQEQI
Trigger: AATTTGTTCTTGGACAATGCATCCCAGAAGATTACG...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCGTAATCTTCTGGGATaGATTGTCCAAGAACAAATT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVRNLLG*IVQEQI
Trigger: AATTTGTTCTTGGACAATGCATCCCAGAAGATTACG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAAAGAAAAGTTACAATaGAAACCACCCCAATGGACT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVKEKLQ*KPPQWT
Trigger: AGTCCATTGGGGTGGTTTGCATTGTAACTTTTCTTT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAGTACATATCAGTCTTaGAGTAGTCCAAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFSTYQS*SSPSFE
Trigger: TTCAAAACTTGGACTACTGCAAGACTGATATGTACT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTTTCCTAAACTAAAATaGATGCCCTCCATGTACTAT +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFFPKLK*MPSMYY
Trigger: ATAGTACATGGAGGGCATGCATTTTAGTTTAGGAAA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAACGTCGTAATCTTCTaGGATGCATTGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYNVVIF*DALSKN
Trigger: GTTCTTGGACAATGCATCCCAGAAGATTACGACGTT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGATATTTGTCTCCCCTaGTACATGTCTTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYDICLP*YMSSHH
Trigger: ATGATGGGAAGACATGTACCAGGGGAGACAAATATC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAAATGGGAAAGGACATaGCAGGATGGGAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYKWERT*QDGKFQ
Trigger: TTGGAATTTCCCATCCTGCCATGTCCTTTCCCATTT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATATTATTCTAGCCTATaGCCAAACATGCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPYYSSL*PNMQFG
Trigger: ACCAAACTGCATGTTTGGCCATAGGCTAGAATAATA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATATTATTCTAGCCTATaGCCAAACATGCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKYYSSL*PNMQFG
Trigger: ACCAAACTGCATGTTTGGCCATAGGCTAGAATAATA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCTGGAGAATATTATCTaGAATAGTTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFLENII*NSFMKP
Trigger: GGGTTTCATGAAACTATTCCAGATAATATTCTCCAG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAAGAAATGACTTCCTTTaGTCAATGAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKRNDFL*SMNPMA
Trigger: TGCCATTGGATTCATTGACCAAAGGAAGTCATTTCT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCTCTCATACAGCTTGTaGATAGTTTTGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVLSYSL*IVLCVF
Trigger: AAAAACACACAAAACTATGCACAAGCTGTATGAGAG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGCCTATGGCCAAACATaGAGTTTGGTTGCATTTTAT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYAYGQT*SLVAFY
Trigger: ATAAAATGCAACCAAACTGCATGTTTGGCCATAGGC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAATACTAGAGGAGTTATaGTCTATTGTGAACACACAT +
Preference number: 4 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPILEEL*SIVNTH
Trigger: ATGTGTGTTCACAATAGACCATAACTCCTCTAGTAT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAAGAAGACTGAAAGGTaGCATTCAAACACAACAAAA +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVKKTER*HSNTTK
Trigger: TTTTGTTGTGTTTGAATGCCACCTTTCAGTCTTCTT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCTGGAGAATATTATCTaGAATAGTTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: STCCLAWIPPITFLFRKVLENII*NSFMKP
Trigger: GGGTTTCATGAAACTATTCCAGATAATATTCTCCAG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACACTTGTTGTTTGGCCTaGATTCCTCCAATAACTTTC +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYTCCLA*IPPITF
Trigger: GAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR TCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGGAATTTTGCATAAATaGGACATAGAGGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYGILHK*DIEEQS
Trigger: ACTTTGCTCCTCTATGTCTCATTTATGCAAAATTCC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAAAGAAAAGTTACAATaGAAACCACCCCAATGGACT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYKEKLQ*KPPQWT
Trigger: AGTCCATTGGGGTGGTTTGCATTGTAACTTTTCTTT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGCCAAACATGCAGTTTaGTTGCATTTTATGAGCATT +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYAKHAV*LHFMSI
Trigger: AATGCTCATAAAATGCAACCAAACTGCATGTTTGGC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGAAATGACTTCCTTTaGTCAATGAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYRNDFL*SMNPMA
Trigger: TGCCATTGGATTCATTGACCAAAGGAAGTCATTTCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGTTACCATAAGTTTTaGTGGAGAATATTATCTGGA +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGYHKF*WRILSG
Trigger: TCCAGATAATATTCTCCAGCAAAACTTATGGTAACC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR GCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGTACATATCAGTCTTaGAGTAGTCCAAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSTYQS*SSPSFE
Trigger: TTCAAAACTTGGACTACTGCAAGACTGATATGTACT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAAGAAGACTGAAAGGTaGCATTCAAACACAACAAAA +
Preference number: 4 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYKKTER*HSNTTK
Trigger: TTTTGTTGTGTTTGAATGCCACCTTTCAGTCTTCTT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CCA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAAGAAGACTGAAAGGTaGCATTCAAACACAACAAAA +
Preference number: 4 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYKKTER*HSNTTK
Trigger: TTTTGTTGTGTTTGAATGCCACCTTTCAGTCTTCTT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
3UTR CAA 72 bp ATTAATAACTTTAGATGGCTCTATTCTACTTGTTGTTaGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: INNFRWLYSTCC*AWIPPITFLFR
Trigger: CCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGAATAGAGCCATCTAAAGTTATTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS GCA 90 bp TCAGGAGATGGTCCCATGGGTCCCATTGAGCCCCGTGGGCCGGGCTaGCCAGGAGGGCCTGGCATACCGGGGAAGCCTGGGCTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SGDGPMGPIEPRGPG*PGGPGIPGKPGLPF
Trigger: AAAGGGAAGCCCAGGCTTCCCCGGTATGCCAGGCCCTCCTGGGCAGCCCGGCCCACGGGGCTCAATGGGACCCATGGGACCATCTCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS TCA 90 bp TTGCTTAATGTGGGACAGATCAGGAGATGGTCCCATGGGTCCCATTaGGCCCCGTGGGCCGGGCTGCCCAGGAGGGCCTGGCATACCGGG +
Preference number: 5 (lower is better)
Translates to: LLNVGQIRRWSHGSH*APWAGLPRRAWHTG
Trigger: CCCGGTATGCCAGGCCCTCCTGGGCAGCCCGGCCCACGGGGCTCAATGGGACCCATGGGACCATCTCCTGATCTGTCCCACATTAAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS TCA 90 bp GCCCTGGCCCCCAGGCAGGCCAGGAGGTCCTGGAAGGTAGGTGTTTaGGGCCAGCACCTTGTCACCAGTGATATACTTGCCCAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: ALAPRQARRSWKVGV*GQHLVTSDILAQVS
Trigger: GCTGACCTGGGCAAGTATATCACTGGTGACAAGGTGCTGGCCTCAAACACCTACCTTCCAGGACCTCCTGGCCTGCCTGGGGGCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTAGCCTGGGCTTCCCTTaGGTCCTGGTGAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGSLGFP*VLVSRE
Trigger: CTCCCGGCTCACCAGGACCAAAGGGAAGCCCAGGCT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTAAGCCAGCAACCTCCTaGCAGACTTCAGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFKPATS*QTSAPL
Trigger: CAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCTT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATGAGGCTGCTGTGGTaGTTTCTGGGGCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFMRLLW*FLGHRL
Trigger: CAGCCTGTGCCCCAGAAACAACCACAGCAGCCTCAT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS CCA 90 bp GTGGCACAGCAAGTTCCGGCTTTCACCATGTTCTCAGACTTCTCATaGCCTGAGAAAGGAGATAGGCTCAGTCCTGTCTGGGAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: VAQQVPAFTMFSDFS*PEKGDRLSPVWEAG
Trigger: TCCAGCCTCCCAGACAGGACTGAGCCTATCTCCTTTCTCAGGCCATGAGAAGTCTGAGAACATGGTGAAAGCCGGAACTTGCTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589116.2
CDS CCA 90 bp CCTTTGGTCCTGGTGAGCCAGTGTCATTGGGATATTTGTCTCCCCTaGTACATGTCTTCCCATCATCTTCCCGGATGTAGCCTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: PLVLVSQCHWDICLP*YMSSHHLPGCSLPG
Trigger: GCCGGGAAGGCTACATCCGGGAAGATGATGGGAAGACATGTACCAGGGGAGACAAATATCCCAATGACACTGGCTCACCAGGACCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650467.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGTCCCATGGGTCCCATaGAGCCCCGTGGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFVPWVP*SPVGRA
Trigger: AGCCCGGCCCACGGGGCTCAATGGGACCCATGGGAC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS GCA 90 bp GGTATCCCGGATAACAAGTACACAGCACTCGGCCAAAGTTGTCCGTaGACTGCTGTTCACAGGGAGCCTCGGCACAAACGTCGTAATCTT +
Preference number: 5 (lower is better)
Translates to: GIPDNKYTALGQSCP*TAVHREPRHKRRNL
Trigger: AAGATTACGACGTTTGTGCCGAGGCTCCCTGTGAACAGCAGTGCACGGACAACTTTGGCCGAGTGCTGTGTACTTGTTATCCGGGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589419.1
ENST00000649564.1
ENST00000650467.1
CDS CCA 90 bp TTGGATGGTCATCTCCAGAGCCCAGGTCCATGGCTTCTGGGTAGCTaGGAAATTCCTGAGGTAAAGGGAACTCCTCTGCTGAAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LDGHLQSPGPWLLGS*EIPEVKGTPLLKSE
Trigger: CTCACTCTTCAGCAGAGGAGTTCCCTTTACCTCAGGAATTTCCCAGCTACCCAGAAGCCATGGACCTGGGCTCTGGAGATGACCATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CCA 90 bp GTAGAAGTCTCTGGGGGCTCTCAAGTCTCTTGTCTCAGTTCTTCTTaGATGGTCATCTCCAGAGCCCAGGTCCATGGCTTCTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: VEVSGGSQVSCLSSS*MVISRAQVHGFWVA
Trigger: AGCTACCCAGAAGCCATGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGAGACTTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTGAGCAGAGCAATCTTTaGCTTCAGCTGCAGCACGGT +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFEQSNL*LQLQHG
Trigger: ACCGTGCTGCAGCTGAAGCAAAAGATTGCTCTGCTC...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGTCCCATGGGTCCCATaGAGCCCCGTGGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVVPWVP*SPVGRA
Trigger: AGCCCGGCCCACGGGGCTCAATGGGACCCATGGGAC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTAGGGCCCCTCCGGCCTaGCTTAATGTGGGACAGATC +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGRAPPA*LNVGQI
Trigger: GATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS CCA 90 bp TCTCAGACTTCTCATGGCCAGTGTCATTGGGATATTTGTCTCCCCTaGTACATGTCTTCCCATCATCTTCCCGGATGTAGCCTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: SQTSHGQCHWDICLP*YMSSHHLPGCSLPG
Trigger: GCCGGGAAGGCTACATCCGGGAAGATGATGGGAAGACATGTACCAGGGGAGACAAATATCCCAATGACACTGGCCATGAGAAGTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589419.1
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTATGAGGCTGCTGTGGTaGTTTCTGGGGCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGMRLLW*FLGHRL
Trigger: CAGCCTGTGCCCCAGAAACAACCACAGCAGCCTCAT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGCCCTGAGGTTCAAGTaGTCTCGTCGGGACGTTCAC +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCALRFK*SRRDVH
Trigger: GTGAACGTCCCGACGAGACAACTTGAACCTCAGGGC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGGAGAGCAGGGGCGTTaGCACCACCTGCGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVGEQGR*HHLRCP
Trigger: CGGACACCGCAGGTGGTGCAAACGCCCCTGCTCTCC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS GCA 90 bp TTTGCTTCAGCTGCAGCACGGTCTGCTTCATCTGGTAGAACTCCTTaGATGTGGCACAGCAAGTTCCGGCTTTCACCATGTTCTCAGACT +
Preference number: 5 (lower is better)
Translates to: FASAAARSASSGRTP*MWHSKFRLSPCSQT
Trigger: AGTCTGAGAACATGGTGAAAGCCGGAACTTGCTGTGCCACATGCAAGGAGTTCTACCAGATGAAGCAGACCGTGCTGCAGCTGAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000589419.1
ENST00000649564.1
CDS CCA 90 bp TCAGCTGCAGCACGGTCTGCTTCATCTGGTAGAACTCCTTGCATGTaGCACAGCAAGTTCCGGCTTTCACCATGTTCTCAGACTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SAAARSASSGRTPCM*HSKFRLSPCSQTSH
Trigger: ATGAGAAGTCTGAGAACATGGTGAAAGCCGGAACTTGCTGTGCCACATGCAAGGAGTTCTACCAGATGAAGCAGACCGTGCTGCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000589419.1
ENST00000649564.1
CDS CCA 90 bp TTGTCTCAGTTCTTCTTGGATGGTCATCTCCAGAGCCCAGGTCCATaGCTTCTGGGTAGCTGGGAAATTCCTGAGGTAAAGGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: LSQFFLDGHLQSPGP*LLGSWEIPEVKGTP
Trigger: AGGAGTTCCCTTTACCTCAGGAATTTCCCAGCTACCCAGAAGCCATGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CCA 90 bp TCCTTTGGCGTGACGGTGTTGGGATGTGCTATGGGTAGAAGTCTCTaGGGGCTCTCAAGTCTCTTGTCTCAGTTCTTCTTGGATGGTCAT +
Preference number: 5 (lower is better)
Translates to: SFGVTVLGCAMGRSL*GLSSLLSQFFLDGH
Trigger: ATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGAGACTTCTACCCATAGCACATCCCAACACCGTCACGCCAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAGCCTGGGCTTCCCTTaGGTCCTGGTGAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSLGFP*VLVSRE
Trigger: CTCCCGGCTCACCAGGACCAAAGGGAAGCCCAGGCT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTTGTCTCAGTTCTTCTaGGATGGTCATCTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFLSQFF*DGHLQS
Trigger: GCTCTGGAGATGACCATCCAAGAAGAACTGAGACAA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATTGCCCAGACTGGCCTaGAACTCCTGGGCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKLPRLA*NSWAQG
Trigger: CCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCAA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATGGAGAAGCCCTCCCTaGCATACCTGGGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKWRSPP*HTWEQG
Trigger: GCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCCA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGAGCAGAGCAATCTTTaGCTTCAGCTGCAGCACGGT +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGEQSNL*LQLQHG
Trigger: ACCGTGCTGCAGCTGAAGCAAAAGATTGCTCTGCTC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTTTGGCGTGACGGTGTaGGGATGTGCTATGGGTAGA +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGFGVTV*GCAMGR
Trigger: TCTACCCATAGCACATCCCAACACCGTCACGCCAAA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTCAGCCCCACTGTATATaGGTTCAGCCTGGATCATGG +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCQPHCI*VQPGSW
Trigger: CCATGATCCAGGCTGAACCAATATACAGTGGGGCTG...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAAGCCAGCAACCTCCTaGCAGACTTCAGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKKPATS*QTSAPL
Trigger: CAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCTT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTACTCTCAATATGTaGGTGGCAAGCTTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFITLNM*VASLVG
Trigger: GCCAACCAAGCTTGCCACCAACATATTGAGAGTAAT...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTCTATAAACCCGTGGTaGGTGTGGCCCTCTGTCATG +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGSINPW*VWPSVM
Trigger: CATGACAGAGGGCCACACCAACCACGGGTTTATAGA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGGTTTCACCACGTGTaGGTCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGFHHV*VRMVLI
Trigger: GATCAAGACCATCCTGACCAACACGTGGTGAAACCC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTGGAGAAGCCCTCCCTaGCATACCTGGGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFWRSPP*HTWEQG
Trigger: GCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCCA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAGCACTCGGCCAAAGTaGTCCGTGCACTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSTRPK*SVHCCS
Trigger: TGAACAGCAGTGCACGGACAACTTTGGCCGAGTGCT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTTCATGGCCAGTGTCATaGGGATATTTGTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGSWPVS*GYLSPL
Trigger: CAGGGGAGACAAATATCCCAATGACACTGGCCATGA...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTCATGGCCAGTGTCATaGGGATATTTGTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCSWPVS*GYLSPL
Trigger: CAGGGGAGACAAATATCCCAATGACACTGGCCATGA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCCCAGGTCAGCTGCATaGTTGGGGAGCAGAGCAATC +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFPRSAA*LGSRAI
Trigger: GATTGCTCTGCTCCCCAACAATGCAGCTGACCTGGG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACTGGAAGGTAGGTGTTaGAGGCCAGCACCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKLEGRC*RPAPCH
Trigger: GTGACAAGGTGCTGGCCTCAAACACCTACCTTCCAG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTTAACTGCAGGTGAGTaGATCTTTCTCTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFLTAGE*IFLFLW
Trigger: CCAAAGGAAGAGAAAGATCAACTCACCTGCAGTTAA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAAGCCAGCAACCTCCTaGCAGACTTCAGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFKPATS*QTSAPL
Trigger: CAGTGGGGCTGAAGTCTGCAAGGAGGTTGCTGGCTT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAATCCACAGCAAACCTaGGCAGGAACATGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCNPQQT*AGTCFP
Trigger: AGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGTTGCCACTAGAGGTTaGCAAAGCCCCTTCCTAACA +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGVATRG*QSPFLT
Trigger: TGTTAGGAAGGGGCTTTGCAAACCTCTAGTGGCAAC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATTGCCCAGACTGGCCTaGAACTCCTGGGCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPLPRLA*NSWAQG
Trigger: CCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCAA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTTGCCCAGACTGGCCTaGAACTCCTGGGCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVLPRLA*NSWAQG
Trigger: CCCTTGAGCCCAGGAGTTCAAGGCCAGTCTGGGCAA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGGTTCAAGCAATTCTaGTGTCTCAGCTTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGFKQF*CLSFPS
Trigger: ACTCGGGAAGCTGAGACACAAGAATTGCTTGAACCC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTGGGTTCAAGCAATTCTaGTGTCTCAGCTTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGGFKQF*CLSFPS
Trigger: ACTCGGGAAGCTGAGACACAAGAATTGCTTGAACCC...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTTGGAGAAGCCCTCCCTaGCATACCTGGGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVWRSPP*HTWEQG
Trigger: GCCCTGTTCCCAGGTATGCAAGGGAGGGCTTCTCCA...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTTGCTTGAATGCTAACTaGACTGTTACATGGACCTGT +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFCLNAN*TVTWTC
Trigger: ACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCA...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS TCA 90 bp ATATCCTTTGCAGCACTTTTTCCTGTAGCATGTGGTGAGCTCGCCTaGAGACTTCAGACACGGGTATTTAGTCGTCGCGATTTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: ISFAALFPVACGELA*RLQTRVFSRRDFAL
Trigger: GAGAGCAAAATCGCGACGACTAAATACCCGTGTCTGAAGTCTTCAGGCGAGCTCACCACATGCTACAGGAAAAAGTGCTGCAAAGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439986.9
ENST00000649564.1
ENST00000650467.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAACCCAGGTCAGCTGCATaGTTGGGGAGCAGAGCAATC +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKPRSAA*LGSRAI
Trigger: GATTGCTCTGCTCCCCAACAATGCAGCTGACCTGGG...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGGCTCTCAAGTCTCTaGTCTCAGTTCTTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGLSSL*SQFFLD
Trigger: ATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAGCACATCGACACGTTaGTCCTCCCCACCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSTSTR*SSPPLF
Trigger: AAAAAGGGGTGGGGAGGACAAACGTGTCGATGTGCT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGGAACATGCTTCCCTTaGCCACCCAGAGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVGTCFP*PPRGAL
Trigger: CAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp GGGCACCTGCTCAGAACCAGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTCATCTCTCATACAGCTaGTGCATAGTTTTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: GHLLRTRNSAPLSKLSQFHLSYS*CIVLCV
Trigger: AACACACAAAACTATGCACAAGCTGTATGAGAGATG...AAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCTGGTTCTGAGCAGGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATGAGGCTGCTGTGGTaGTTTCTGGGGCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVMRLLW*FLGHRL
Trigger: CAGCCTGTGCCCCAGAAACAACCACAGCAGCCTCAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAATCACCAGTGATATACTaGCCCAGGTCAGCTGCATTG +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSPVIY*PRSAAL
Trigger: CAATGCAGCTGACCTGGGCAAGTATATCACTGGTGA...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGGGCCCCTCCGGCCTaGCTTAATGTGGGACAGATC +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYRAPPA*LNVGQI
Trigger: GATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAAGCTCAGTGATGTCATaGCGGATGTCAGCCAGCATA +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKSSVMS*RMSASI
Trigger: TATGCTGGCTGACATCCGCAATGACATCACTGAGCT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCAGCCCCACTGTATATaGGTTCAGCCTGGATCATGG +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFQPHCI*VQPGSW
Trigger: CCATGATCCAGGCTGAACCAATATACAGTGGGGCTG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGTTGCCACTAGAGGTTaGCAAAGCCCCTTCCTAACA +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKVATRG*QSPFLT
Trigger: TGTTAGGAAGGGGCTTTGCAAACCTCTAGTGGCAAC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTAATATGATGGGGGAGTaGCTACCTGAAAACCTACAG +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGNMMGE*LPENLQ
Trigger: CTGTAGGTTTTCAGGTAGCAACTCCCCCATCATATT...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTAATATGATGGGGGAGTaGCTACCTGAAAACCTACAG +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCNMMGE*LPENLQ
Trigger: CTGTAGGTTTTCAGGTAGCAACTCCCCCATCATATT...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS CCA 90 bp GAACAAATTTATATCCTTTGCAGCACTTTTTCAGTTCCACATGGCTaGGGAGGCTTCATAATCACGGCAAAAGGCGAGGAGGAACAAGTC +
Preference number: 5 (lower is better)
Translates to: EQIYILCSTFSVPHG*GGFIITAKGEEEQV
Trigger: GACTTGTTCCTCCTCGCCTTTTGCCGTGATTATGAAGCCTCCCCAGCCATGTGGAACTGAAAAAGTGCTGCAAAGGATATAAATTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589419.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTCACCAGTGATATACTaGCCCAGGTCAGCTGCATTG +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFSPVIY*PRSAAL
Trigger: CAATGCAGCTGACCTGGGCAAGTATATCACTGGTGA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATTTGGCGTGACGGTGTaGGGATGTGCTATGGGTAGA +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKFGVTV*GCAMGR
Trigger: TCTACCCATAGCACATCCCAACACCGTCACGCCAAA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGGAACATGCTTCCCTTaGCCACCCAGAGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYGTCFP*PPRGAL
Trigger: CAGAGCACCTCTGGGTGGCAAAGGGAAGCATGTTCC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCAATCCACAGCAAACCTaGGCAGGAACATGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFNPQQT*AGTCFP
Trigger: AGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTGTGAGAACGATCATTaGCAGGAGAGTGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCCENDH*QESENL
Trigger: GAGATTTTCACTCTCCTGCAAATGATCGTTCTCACA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATCTATAAACCCGTGGTaGGTGTGGCCCTCTGTCATG +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSINPW*VWPSVM
Trigger: CATGACAGAGGGCCACACCAACCACGGGTTTATAGA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTGGCCAAACATGCAGTTaGGTTGCATTTTATGAGCAT +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCGQTCS*VAFYEH
Trigger: ATGCTCATAAAATGCAACCAAACTGCATGTTTGGCC...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAGCTCTATTCTACTTGTaGTTTGGCCTGGATTCCTCC +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKALFYL*FGLDSS
Trigger: GGAGGAATCCAGGCCAAACAACAAGTAGAATAGAGC...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCCGCAAAGGTAGATAAAGAGCCACTTTGTGTGTCCAGTGAGAAAGTGGACTGTTGCTTGAATGCTAACTaGACTGTTACATGGACCTGT +
Preference number: 5 (lower is better)
Translates to: PAKVDKEPLCVSSEKVDCCLNAN*TVTWTC
Trigger: ACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCA...ACAGTCCACTTTCTCACTGGACACACAAAGTGGCTCTTTATCTACCTTTGCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGCACTCGGCCAAAGTaGTCCGTGCACTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSTRPK*SVHCCS
Trigger: TGAACAGCAGTGCACGGACAACTTTGGCCGAGTGCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAGCACTCGGCCAAAGTaGTCCGTGCACTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSTRPK*SVHCCS
Trigger: TGAACAGCAGTGCACGGACAACTTTGGCCGAGTGCT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGTGTCATTGGGATATTaGTCTCCCCTGGTACATGTC +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFVSLGY*SPLVHV
Trigger: GACATGTACCAGGGGAGACAAATATCCCAATGACAC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATCATGGCCAGTGTCATaGGGATATTTGTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPSWPVS*GYLSPL
Trigger: CAGGGGAGACAAATATCCCAATGACACTGGCCATGA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTTTGAGGCCAGCACCTaGTCACCAGTGATATACTTG +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFFEAST*SPVIYL
Trigger: CAAGTATATCACTGGTGACAAGGTGCTGGCCTCAAA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACCTGGAAGGTAGGTGTTaGAGGCCAGCACCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYLEGRC*RPAPCH
Trigger: GTGACAAGGTGCTGGCCTCAAACACCTACCTTCCAG...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGCTCAGTGATGTCATaGCGGATGTCAGCCAGCATA +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVSSVMS*RMSASI
Trigger: TATGCTGGCTGACATCCGCAATGACATCACTGAGCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGGGCTCTCAAGTCTCTaGTCTCAGTTCTTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFGLSSL*SQFFLD
Trigger: ATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCATGTTGGTGGCAAGCTaGGTTGGCTCCAGACAAAAA +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFMLVAS*VGSRQK
Trigger: TTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACAT...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTCCTATAAGCTGCTCATaGGAAACAAGAGGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVPISCS*ETRGPS
Trigger: TGAGGGCCCTCTTGTTTCCAATGAGCAGCTTATAGG...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAACCTATAAGCTGCTCATaGGAAACAAGAGGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKPISCS*ETRGPS
Trigger: TGAGGGCCCTCTTGTTTCCAATGAGCAGCTTATAGG...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCGCTCTATTCTACTTGTaGTTTGGCCTGGATTCCTCC +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFALFYL*FGLDSS
Trigger: GGAGGAATCCAGGCCAAACAACAAGTAGAATAGAGC...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGTGTCATTGGGATATTaGTCTCCCCTGGTACATGTC +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKVSLGY*SPLVHV
Trigger: GACATGTACCAGGGGAGACAAATATCCCAATGACAC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGAGCAGAGCAATCTTTaGCTTCAGCTGCAGCACGGT +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYEQSNL*LQLQHG
Trigger: ACCGTGCTGCAGCTGAAGCAAAAGATTGCTCTGCTC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATTTGAGGCCAGCACCTaGTCACCAGTGATATACTTG +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPFEAST*SPVIYL
Trigger: CAAGTATATCACTGGTGACAAGGTGCTGGCCTCAAA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATTTGAGGCCAGCACCTaGTCACCAGTGATATACTTG +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKFEAST*SPVIYL
Trigger: CAAGTATATCACTGGTGACAAGGTGCTGGCCTCAAA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTGGGCTCTCAAGTCTCTaGTCTCAGTTCTTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVGLSSL*SQFFLD
Trigger: ATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCC...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTTTGGCGTGACGGTGTaGGGATGTGCTATGGGTAGA +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYFGVTV*GCAMGR
Trigger: TCTACCCATAGCACATCCCAACACCGTCACGCCAAA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGCACATCGACACGTTaGTCCTCCCCACCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYSTSTR*SSPPLF
Trigger: AAAAAGGGGTGGGGAGGACAAACGTGTCGATGTGCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATGTTGGTGGCAAGCTaGGTTGGCTCCAGACAAAAA +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVMLVAS*VGSRQK
Trigger: TTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAATGTTGGTGGCAAGCTaGGTTGGCTCCAGACAAAAA +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKMLVAS*VGSRQK
Trigger: TTTTTGTCTGGAGCCAACCAAGCTTGCCACCAACAT...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTAGGGAAGGAAGACTGTaGCCACTAGAGGTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVREGRL*PLEVCK
Trigger: TTTGCAAACCTCTAGTGGCAACAGTCTTCCTTCCCT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAAGGGAAGGAAGACTGTaGCCACTAGAGGTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPREGRL*PLEVCK
Trigger: TTTGCAAACCTCTAGTGGCAACAGTCTTCCTTCCCT...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGGGTTTCACCACGTGTaGGTCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYGFHHV*VRMVLI
Trigger: GATCAAGACCATCCTGACCAACACGTGGTGAAACCC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAAGCTCTATTCTACTTGTaGTTTGGCCTGGATTCCTCC +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKALFYL*FGLDSS
Trigger: GGAGGAATCCAGGCCAAACAACAAGTAGAATAGAGC...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CCAGATGGGAATCAACAGCTGTTCAGTTCCTCTCTCTATAAACCCGTGGTTGGTCACATCCATAATTGCTaGAATGCTAACTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: PDGNQQLFSSSLYKPVVGHIHNC*NANLTV
Trigger: AACAGTCAAGTTAGCATTCAAGCAATTATGGATGTG...ACCAACCACGGGTTTATAGAGAGAGGAACTGAACAGCTGTTGATTCCCATCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTTAGTCGTCGCGATTTaGCTCTCTGAGCAGATTTCT +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFLVVAI*LSEQIS
Trigger: AGAAATCTGCTCAGAGAGCAAAATCGCGACGACTAA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTCACCAGTGATATACTaGCCCAGGTCAGCTGCATTG +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSPVIY*PRSAAL
Trigger: CAATGCAGCTGACCTGGGCAAGTATATCACTGGTGA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACAGCTCAGTGATGTCATaGCGGATGTCAGCCAGCATA +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYSSVMS*RMSASI
Trigger: TATGCTGGCTGACATCCGCAATGACATCACTGAGCT...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TCTACTTGTTGTTTGGCCTGGATTCCTCCAATAACTTTCCTTTTCAGGAAGGTTATTACTCTCAATATGTaGGTGGCAAGCTTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: STCCLAWIPPITFLFRKVITLNM*VASLVG
Trigger: GCCAACCAAGCTTGCCACCAACATATTGAGAGTAAT...AACCTTCCTGAAAAGGAAAGTTATTGGAGGAATCCAGGCCAAACAACAAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAATCCACAGCAAACCTaGGCAGGAACATGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYNPQQT*AGTCFP
Trigger: AGGGAAGCATGTTCCTGCCAAGGTTTGCTGTGGATT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCTGTGAGAACGATCATTaGCAGGAGAGTGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFCENDH*QESENL
Trigger: GAGATTTTCACTCTCCTGCAAATGATCGTTCTCACA...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATGTTGCCACTAGAGGTTaGCAAAGCCCCTTCCTAACA +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYVATRG*QSPFLT
Trigger: TGTTAGGAAGGGGCTTTGCAAACCTCTAGTGGCAAC...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAACATCTCTCATACAGCTaGTGCATAGTTTTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKHLSYS*CIVLCV
Trigger: AACACACAAAACTATGCACAAGCTGTATGAGAGATG...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATTAGTCGTCGCGATTTaGCTCTCTGAGCAGATTTCT +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKLVVAI*LSEQIS
Trigger: AGAAATCTGCTCAGAGAGCAAAATCGCGACGACTAA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTTGTCTCAGTTCTTCTaGGATGGTCATCTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYLSQFF*DGHLQS
Trigger: GCTCTGGAGATGACCATCCAAGAAGAACTGAGACAA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAATTAACTGCAGGTGAGTaGATCTTTCTCTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKLTAGE*IFLFLW
Trigger: CCAAAGGAAGAGAAAGATCAACTCACCTGCAGTTAA...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATAGGGAAGGAAGACTGTaGCCACTAGAGGTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYREGRL*PLEVCK
Trigger: TTTGCAAACCTCTAGTGGCAACAGTCTTCCTTCCCT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAGGTGGAGATATAGACCTTTTTCTGAACTGCTTCTCACATGCAGGGGAAAAATATTTTTATTCCCATaGCTTTCCAAGAACAGAGGC +
Preference number: 5 (lower is better)
Translates to: RRWRYRPFSELLLTCRGKIFLFP*LSKNRG
Trigger: GCCTCTGTTCTTGGAAAGCAATGGGAATAAAAATAT...TTTTCCCCTGCATGTGAGAAGCAGTTCAGAAAAAGGTCTATATCTCCACCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATGCTTGAATGCTAACTaGACTGTTACATGGACCTGT +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPCLNAN*TVTWTC
Trigger: ACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp ACTTTCAATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCATATTCTACTTGTTGTTaGGCCTGGATTCCTCCAATA +
Preference number: 5 (lower is better)
Translates to: TFNSVLLSICWWQAWLAPYSTCC*AWIPPI
Trigger: TATTGGAGGAATCCAGGCCAAACAACAAGTAGAATA...TGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATTGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp CAATGCAAACCACCCCAATGGACTCTTAGTGAGAAGCAGGTAAATCAATCATTCCACATCCATAATTGCTaGAATGCTAACTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: QCKPPQWTLSEKQVNQSFHIHNC*NANLTV
Trigger: AACAGTCAAGTTAGCATTCAAGCAATTATGGATGTG...GAATGATTGATTTACCTGCTTCTCACTAAGAGTCCATTGGGGTGGTTTGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTTAACTGCAGGTGAGTaGATCTTTCTCTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYLTAGE*IFLFLW
Trigger: CCAAAGGAAGAGAAAGATCAACTCACCTGCAGTTAA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTGTGAGAACGATCATTaGCAGGAGAGTGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYCENDH*QESENL
Trigger: GAGATTTTCACTCTCCTGCAAATGATCGTTCTCACA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACGGCCAAACATGCAGTTaGGTTGCATTTTATGAGCAT +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYGQTCS*VAFYEH
Trigger: ATGCTCATAAAATGCAACCAAACTGCATGTTTGGCC...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AATAGTGTATTACTCTCAATATGTTGGTGGCAAGCTTGGTTGGCTCCAGACAAACACATCCATAATTGCTaGAATGCTAACTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: NSVLLSICWWQAWLAPDKHIHNC*NANLTV
Trigger: AACAGTCAAGTTAGCATTCAAGCAATTATGGATGTG...TTTGTCTGGAGCCAACCAAGCTTGCCACCAACATATTGAGAGTAATACACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATTATTCTACTTGTTGTTaGGCCTGGATTCCTCCAATA +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYYSTCC*AWIPPI
Trigger: TATTGGAGGAATCCAGGCCAAACAACAAGTAGAATA...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp TATCACATCCATAATTGCTTGAATGCTAACTTGACTGTTACATGGACCTGTTACTATTCTACTTGTTGTTaGGCCTGGATTCCTCCAATA +
Preference number: 5 (lower is better)
Translates to: YHIHNCLNANLTVTWTCYYSTCC*AWIPPI
Trigger: TATTGGAGGAATCCAGGCCAAACAACAAGTAGAATA...GTAACAGGTCCATGTAACAGTCAAGTTAGCATTCAAGCAATTATGGATGTGATA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS-3UTR CAA 90 bp AGGAATTCTGCACCTCTCTCTAAGCTCAGCCAGTTTATTGAACAAATAATCTATATATTTTTATTCCCATaGCTTTCCAAGAACAGAGGC +
Preference number: 5 (lower is better)
Translates to: RNSAPLSKLSQFIEQIIYIFLFP*LSKNRG
Trigger: GCCTCTGTTCTTGGAAAGCAATGGGAATAAAAATAT...ATAGATTATTTGTTCAATAAACTGGCTGAGCTTAGAGAGAGGTGCAGAATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000649564.1
CDS TCA 72 bp GTGGGACAGATCAGGAGATGGTCCCATGGGTCCCATTaGGCCCCGTGGGCCGGGCTGCCCAGGAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: VGQIRRWSHGSH*APWAGLPRRAW
Trigger: CCAGGCCCTCCTGGGCAGCCCGGCCCACGGGGCTCAATGGGACCCATGGGACCATCTCCTGATCTGTCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CAA 72 bp TGTGGGACAGATCAGGAGATGGTCCCATGGGTCCCATaGAGCCCCGTGGGCCGGGCTGCCCAGGAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: CGTDQEMVPWVP*SPVGRAAQEGL
Trigger: CAGGCCCTCCTGGGCAGCCCGGCCCACGGGGCTCAATGGGACCCATGGGACCATCTCCTGATCTGTCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS TCA 72 bp TGCACCACCTGCGGTGTCCGGCTGGCGCGAGGGCCCTaGGGTTCAAGTTGTCTCGTCGGGACGTTCACGTCC +
Preference number: 6 (lower is better)
Translates to: CTTCGVRLARGP*GSSCLVGTFTS
Trigger: GGACGTGAACGTCCCGACGAGACAACTTGAACCTCAGGGCCCTCGCGCCAGCCGGACACCGCAGGTGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS GCA 72 bp GGTGCCCCTGGTGGACCCACAGGGCCCCTCCGGCCTTaGTTAATGTGGGACAGATCAGGAGATGGTCCCATG +
Preference number: 6 (lower is better)
Translates to: GAPGGPTGPLRP*LMWDRSGDGPM
Trigger: CATGGGACCATCTCCTGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCTGTGGGTCCACCAGGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CAA 72 bp CGGTGTCCGGCTGGCGCGAGGGCCCTGAGGTTCAAGTaGTCTCGTCGGGACGTTCACGTCCGATTGACAGAC +
Preference number: 6 (lower is better)
Translates to: RCPAGARALRFK*SRRDVHVRLTD
Trigger: GTCTGTCAATCGGACGTGAACGTCCCGACGAGACAACTTGAACCTCAGGGCCCTCGCGCCAGCCGGACACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS CAA 90 bp CACCACCTGCGGTGTCCGGCTGGCGCGAGGGCCCTGAGGTTCAAGTaGTCTCGTCGGGACGTTCACGTCCGATTGACAGACTTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: HHLRCPAGARALRFK*SRRDVHVRLTDLLD
Trigger: GTCCAGCAAGTCTGTCAATCGGACGTGAACGTCCCGACGAGACAACTTGAACCTCAGGGCCCTCGCGCCAGCCGGACACCGCAGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649564.1
CDS CAA 72 bp TGGTGCCCCTGGTGGACCCACAGGGCCCCTCCGGCCTaGCTTAATGTGGGACAGATCAGGAGATGGTCCCAT +
Preference number: 6 (lower is better)
Translates to: WCPWWTHRAPPA*LNVGQIRRWSH
Trigger: ATGGGACCATCTCCTGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCTGTGGGTCCACCAGGGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS TCA 72 bp CTTCCCGGCACTCGCAGCGGTAGCTGCCCAAGGTATTaGTGCAGATGTGGGCACACAGCGTCCCATTGCTGC +
Preference number: 6 (lower is better)
Translates to: LPGTRSGSCPRY*CRCGHTASHCC
Trigger: GCAGCAATGGGACGCTGTGTGCCCACATCTGCATCAATACCTTGGGCAGCTACCGCTGCGAGTGCCGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589419.1
ENST00000649564.1
ENST00000650467.1
CDS CCA 72 bp GGTGGACCCACAGGGCCCCTCCGGCCTTGCTTAATGTaGGACAGATCAGGAGATGGTCCCATGGGTCCCATT +
Preference number: 6 (lower is better)
Translates to: GGPTGPLRPCLM*DRSGDGPMGPI
Trigger: AATGGGACCCATGGGACCATCTCCTGATCTGTCCCACATTAAGCAAGGCCGGAGGGGCCCTGTGGGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CCA 72 bp AGGGGAGGACAGAGGGAGAGGGGCCCTGCTAGAAGCTaGGCTCAGCTGTTCCTATTTAGACATGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RGGQRERGPARS*AQLFLFRHARK
Trigger: CTTCCTGGCATGTCTAAATAGGAACAGCTGAGCCCAGCTTCTAGCAGGGCCCCTCTCCCTCTGTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589116.2
CDS TCA 72 bp CAGACACGGGTATTTAGTCGTCGCGATTTTGCTCTCTaGGCAGATTTCTCTGTCGCCGTCCTCCGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QTRVFSRRDFAL*ADFSVAVLRLL
Trigger: GAGGAGCCGGAGGACGGCGACAGAGAAATCTGCTCAGAGAGCAAAATCGCGACGACTAAATACCCGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS CCA 72 bp CATCTCCAGAGCCCAGGTCCATGGCTTCTGGGTAGCTaGGAAATTCCTGAGGTAAAGGGAACTCCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: HLQSPGPWLLGS*EIPEVKGTPLL
Trigger: CAGCAGAGGAGTTCCCTTTACCTCAGGAATTTCCCAGCTACCCAGAAGCCATGGACCTGGGCTCTGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CCA 72 bp GGGGCTCTCAAGTCTCTTGTCTCAGTTCTTCTTGGATaGTCATCTCCAGAGCCCAGGTCCATGGCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: GALKSLVSVLLG*SSPEPRSMASG
Trigger: CCCAGAAGCCATGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CAA 90 bp GGTAGAAGTCTCTGGGGGCTCTCAAGTCTCTTGTCTCAGTTCTTCTaGGATGGTCATCTCCAGAGCCCAGGTCCATGGCTTCTGGGTAGC +
Preference number: 6 (lower is better)
Translates to: GRSLWGLSSLLSQFF*DGHLQSPGPWLLGS
Trigger: GCTACCCAGAAGCCATGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGAGACTTCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS CAA 90 bp AGCTCGCCTGAAGACTTCAGACACGGGTATTTAGTCGTCGCGATTTaGCTCTCTGAGCAGATTTCTCTGTCGCCGTCCTCCGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SSPEDFRHGYLVVAI*LSEQISLSPSSGSS
Trigger: AGAGGAGCCGGAGGACGGCGACAGAGAAATCTGCTCAGAGAGCAAAATCGCGACGACTAAATACCCGTGTCTGAAGTCTTCAGGCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS GCA 72 bp GATAACAAGTACACAGCACTCGGCCAAAGTTGTCCGTaGACTGCTGTTCACAGGGAGCCTCGGCACAAACGT +
Preference number: 6 (lower is better)
Translates to: DNKYTALGQSCP*TAVHREPRHKR
Trigger: ACGTTTGTGCCGAGGCTCCCTGTGAACAGCAGTGCACGGACAACTTTGGCCGAGTGCTGTGTACTTGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589419.1
ENST00000649564.1
ENST00000650467.1
CDS GCA 72 bp GCTGCAGCACGGTCTGCTTCATCTGGTAGAACTCCTTaGATGTGGCACAGCAAGTTCCGGCTTTCACCATGT +
Preference number: 6 (lower is better)
Translates to: AAARSASSGRTP*MWHSKFRLSPC
Trigger: ACATGGTGAAAGCCGGAACTTGCTGTGCCACATGCAAGGAGTTCTACCAGATGAAGCAGACCGTGCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000589419.1
ENST00000649564.1
CDS CCA 72 bp TCTGGGGGCTCTCAAGTCTCTTGTCTCAGTTCTTCTTaGATGGTCATCTCCAGAGCCCAGGTCCATGGCTTC +
Preference number: 6 (lower is better)
Translates to: SGGSQVSCLSSS*MVISRAQVHGF
Trigger: GAAGCCATGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS CAA 72 bp CTCTGGGGGCTCTCAAGTCTCTTGTCTCAGTTCTTCTaGGATGGTCATCTCCAGAGCCCAGGTCCATGGCTT +
Preference number: 6 (lower is better)
Translates to: LWGLSSLLSQFF*DGHLQSPGPWL
Trigger: AAGCCATGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS TCA 72 bp GAAGGTAGGTGTTTGAGGCCAGCACCTTGTCACCAGTaGTATACTTGCCCAGGTCAGCTGCATTGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: EGRCLRPAPCHQ*YTCPGQLHCWG
Trigger: TCCCCAACAATGCAGCTGACCTGGGCAAGTATATCACTGGTGACAAGGTGCTGGCCTCAAACACCTACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS CCA 72 bp GCACGGTCTGCTTCATCTGGTAGAACTCCTTGCATGTaGCACAGCAAGTTCCGGCTTTCACCATGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: ARSASSGRTPCM*HSKFRLSPCSQ
Trigger: CTGAGAACATGGTGAAAGCCGGAACTTGCTGTGCCACATGCAAGGAGTTCTACCAGATGAAGCAGACCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000589419.1
ENST00000649564.1
CDS CAA 72 bp TGCCCGAACACCTTTTCCTGCAGCTCAGTGATGTCATaGCGGATGTCAGCCAGCATAAGTAGCAGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: CPNTFSCSSVMS*RMSASISSRKS
Trigger: CGACTTCCTGCTACTTATGCTGGCTGACATCCGCAATGACATCACTGAGCTGCAGGAAAAGGTGTTCGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CAA 90 bp TTGGGATGTGCTATGGGTAGAAGTCTCTGGGGGCTCTCAAGTCTCTaGTCTCAGTTCTTCTTGGATGGTCATCTCCAGAGCCCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: LGCAMGRSLWGLSSL*SQFFLDGHLQSPGP
Trigger: TGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGAGACTTCTACCCATAGCACATCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS TCA 72 bp GCAGCACTTTTTCCTGTAGCATGTGGTGAGCTCGCCTaGAGACTTCAGACACGGGTATTTAGTCGTCGCGAT +
Preference number: 6 (lower is better)
Translates to: AALFPVACGELA*RLQTRVFSRRD
Trigger: ATCGCGACGACTAAATACCCGTGTCTGAAGTCTTCAGGCGAGCTCACCACATGCTACAGGAAAAAGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439986.9
ENST00000649564.1
ENST00000650467.1
CDS CCA 72 bp TTCTTCTTGGATGGTCATCTCCAGAGCCCAGGTCCATaGCTTCTGGGTAGCTGGGAAATTCCTGAGGTAAAG +
Preference number: 6 (lower is better)
Translates to: FFLDGHLQSPGP*LLGSWEIPEVK
Trigger: CTTTACCTCAGGAATTTCCCAGCTACCCAGAAGCCATGGACCTGGGCTCTGGAGATGACCATCCAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
ENST00000650467.1
CDS CCA 72 bp GTGACGGTGTTGGGATGTGCTATGGGTAGAAGTCTCTaGGGGCTCTCAAGTCTCTTGTCTCAGTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: VTVLGCAMGRSL*GLSSLLSQFFL
Trigger: CAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGAGACTTCTACCCATAGCACATCCCAACACCGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS CCA 72 bp CAAGTTCCGGCTTTCACCATGTTCTCAGACTTCTCATaGCCTGAGAAAGGAGATAGGCTCAGTCCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: QVPAFTMFSDFS*PEKGDRLSPVW
Trigger: CCAGACAGGACTGAGCCTATCTCCTTTCTCAGGCCATGAGAAGTCTGAGAACATGGTGAAAGCCGGAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589116.2
CDS CCA 72 bp CTGGTGAGCCAGTGTCATTGGGATATTTGTCTCCCCTaGTACATGTCTTCCCATCATCTTCCCGGATGTAGC +
Preference number: 6 (lower is better)
Translates to: LVSQCHWDICLP*YMSSHHLPGCS
Trigger: GCTACATCCGGGAAGATGATGGGAAGACATGTACCAGGGGAGACAAATATCCCAATGACACTGGCTCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650467.1
CDS CAA 72 bp GCTATGGGTAGAAGTCTCTGGGGGCTCTCAAGTCTCTaGTCTCAGTTCTTCTTGGATGGTCATCTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: AMGRSLWGLSSL*SQFFLDGHLQS
Trigger: GCTCTGGAGATGACCATCCAAGAAGAACTGAGACAAGAGACTTGAGAGCCCCCAGAGACTTCTACCCATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS CAA 72 bp GAAGACTTCAGACACGGGTATTTAGTCGTCGCGATTTaGCTCTCTGAGCAGATTTCTCTGTCGCCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: EDFRHGYLVVAI*LSEQISLSPSS
Trigger: GGAGGACGGCGACAGAGAAATCTGCTCAGAGAGCAAAATCGCGACGACTAAATACCCGTGTCTGAAGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439986.9
ENST00000649564.1
CDS CAA 72 bp CCCTTTGGTCCTGGTGAGCCAGTGTCATTGGGATATTaGTCTCCCCTGGTACATGTCTTCCCATCATCTTCC +
Preference number: 6 (lower is better)
Translates to: PFGPGEPVSLGY*SPLVHVFPSSS
Trigger: GGAAGATGATGGGAAGACATGTACCAGGGGAGACAAATATCCCAATGACACTGGCTCACCAGGACCAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650467.1
CDS CCA 72 bp TCTCATGGCCAGTGTCATTGGGATATTTGTCTCCCCTaGTACATGTCTTCCCATCATCTTCCCGGATGTAGC +
Preference number: 6 (lower is better)
Translates to: SHGQCHWDICLP*YMSSHHLPGCS
Trigger: GCTACATCCGGGAAGATGATGGGAAGACATGTACCAGGGGAGACAAATATCCCAATGACACTGGCCATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589419.1
ENST00000649564.1
CDS CAA 72 bp TTGTCACCAGTGATATACTTGCCCAGGTCAGCTGCATaGTTGGGGAGCAGAGCAATCTTTTGCTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LSPVIYLPRSAA*LGSRAIFCFSC
Trigger: GCAGCTGAAGCAAAAGATTGCTCTGCTCCCCAACAATGCAGCTGACCTGGGCAAGTATATCACTGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000589419.1
ENST00000649564.1
CDS CAA 90 bp CTCCAGTGGTCTTTCTTCTCTTTAGATGGTTTAACTGCAGGTGAGTaGATCTTTCTCTTCCTTTGGCGTGACGGTGTTGGGATGTGCTAT +
Preference number: 6 (lower is better)
Translates to: LQWSFFSLDGLTAGE*IFLFLWRDGVGMCY
Trigger: ATAGCACATCCCAACACCGTCACGCCAAAGGAAGAGAAAGATCAACTCACCTGCAGTTAAACCATCTAAAGAGAAGAAAGACCACTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398179.3
ENST00000439986.9
ENST00000589116.2
ENST00000649564.1
CDS GCA 72 bp CTGGGATGCATTGTCCAAGAACAAATTTATATCCTTTaGAGCACTTTTTCAGTTCCACATGGCTGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LGCIVQEQIYIL*STFSVPHGWGG
Trigger: GCCTCCCCAGCCATGTGGAACTGAAAAAGTGCTGCAAAGGATATAAATTTGTTCTTGGACAATGCATCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589419.1