Pregenerated sensors for CCAT2 (Homo sapiens)
Ensembl gene IDs: ENSG00000280997Ensembl transcript IDs: ENST00000630920.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCAGAGTTGCACAGTTATTGCCTGGAGCACCAGGTTAAAGGAAACTaGACTGTGGGGTTGGCTGGCACTGTCTGTATACACAGCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AELHSYCLEHQVKGN*TVGLAGTVCIHSPV Trigger: GACTGGGCTGTGTATACAGACAGTGCCAGCCAACCCCACAGTTCAGTTTCCTTTAACCTGGTGCTCCAGGCAATAACTGTGCAACTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 90 bp | TGCACAGTTATTGCCTGGAGCACCAGGTTAAAGGAAACTGAACTGTaGGGTTGGCTGGCACTGTCTGTATACACAGCCCAGTCTAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CTVIAWSTRLKETEL*GWLALSVYTAQSKA Trigger: GGCCTTAGACTGGGCTGTGTATACAGACAGTGCCAGCCAACCCCACAGTTCAGTTTCCTTTAACCTGGTGCTCCAGGCAATAACTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 90 bp | TTTTGGCTCTTGACTTCCAGTCCAAGGTGGTTTCCTCTTAGCTCTTaGGGAGTCTCTGTTGATACCTCCCTCTTGGTGTCTATACCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FWLLTSSPRWFPLSS*GVSVDTSLLVSIPV Trigger: AACTGGTATAGACACCAAGAGGGAGGTATCAACAGAGACTCCCCAAGAGCTAAGAGGAAACCACCTTGGACTGGAAGTCAAGAGCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 90 bp | GACAAAGAACACATTGTTAAATTGCAGAGTTGCACAGTTATTGCCTaGAGCACCAGGTTAAAGGAAACTGAACTGTGGGGTTGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DKEHIVKLQSCTVIA*STRLKETELWGWLA Trigger: TGCCAGCCAACCCCACAGTTCAGTTTCCTTTAACCTGGTGCTCCAGGCAATAACTGTGCAACTCTGCAATTTAACAATGTGTTCTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 90 bp | GCTCACCAATGCATTGATATAGGCCAAACTGGTATTACAGCCTGCTaGGAAAGTGGGCTCATTCCTTGTACATTTGTACATTTTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AHQCIDIGQTGITAC*ESGLIPCTFVHFGG Trigger: ACCCCCAAAATGTACAAATGTACAAGGAATGAGCCCACTTTCCCAGCAGGCTGTAATACCAGTTTGGCCTATATCAATGCATTGGTGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS GCA 90 bp | ACAGCTCACCAATGCATTGATATAGGCCAAACTGGTATTACAGCCTaGTGGGAAAGTGGGCTCATTCCTTGTACATTTGTACATTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAHQCIDIGQTGITA*WESGLIPCTFVHFG Trigger: CCCAAAATGTACAAATGTACAAGGAATGAGCCCACTTTCCCAGCAGGCTGTAATACCAGTTTGGCCTATATCAATGCATTGGTGAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS GCA 90 bp | CGAGAACAGTTGTGGGACAAAGAACACATTGTTAAATTGCAGAGTTaGACAGTTATTGCCTGGAGCACCAGGTTAAAGGAAACTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: REQLWDKEHIVKLQS*TVIAWSTRLKETEL Trigger: CAGTTCAGTTTCCTTTAACCTGGTGCTCCAGGCAATAACTGTGCAACTCTGCAATTTAACAATGTGTTCTTTGTCCCACAACTGTTCTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 90 bp | TTTGTAATGGTTAGAAAATGCCCTTCTAAGCTTCATCTAATGCATTaGCTTTTTGGCATCTCCCAGAGAAAGCTCTCACCAGATACACCC | + |
|
Preference number: 5 (lower is better) Translates to: FVMVRKCPSKLHLMH*LFGISQRKLSPDTP Trigger: GGGTGTATCTGGTGAGAGCTTTCTCTGGGAGATGCCAAAAAGCCAATGCATTAGATGAAGCTTAGAAGGGCATTTTCTAACCATTACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 90 bp | AGGCCCAAACATATTACCTGGGCAGTTGAGAAACGAGAACAGTTGTaGGACAAAGAACACATTGTTAAATTGCAGAGTTGCACAGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: RPKHITWAVEKREQL*DKEHIVKLQSCTVI Trigger: AATAACTGTGCAACTCTGCAATTTAACAATGTGTTCTTTGTCCCACAACTGTTCTCGTTTCTCAACTGCCCAGGTAATATGTTTGGGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS TCA 90 bp | TTCAGGGACCACATAAATGTTGGTGATGGATGTTTTCCTCAGGGATaGTTATGGCTCTTTAGTCTAATAGCTCTCCTATTCATACCATAT | + |
|
Preference number: 5 (lower is better) Translates to: FRDHINVGDGCFPQG*LWLFSLIALLFIPY Trigger: ATATGGTATGAATAGGAGAGCTATTAGACTAAAGAGCCATAATCATCCCTGAGGAAAACATCCATCACCAACATTTATGTGGTCCCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 90 bp | CAGTCTAAGGCCCCAATCCTGAGAAACTTGCTGGGTTCCTGCCCTTaGATTCAGAGAAAGCAGCTTTCCAGCTGGGGCCGGCTCCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QSKAPILRNLLGSCP*IQRKQLSSWGRLPP Trigger: GGGAGGGAGCCGGCCCCAGCTGGAAAGCTGCTTTCTCTGAATCAAAGGGCAGGAACCCAGCAAGTTTCTCAGGATTGGGGCCTTAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 72 bp | ATTGCCTGGAGCACCAGGTTAAAGGAAACTGAACTGTaGGGTTGGCTGGCACTGTCTGTATACACAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IAWSTRLKETEL*GWLALSVYTAQ Trigger: CTGGGCTGTGTATACAGACAGTGCCAGCCAACCCCACAGTTCAGTTTCCTTTAACCTGGTGCTCCAGGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 90 bp | CTGTCTGTATACACAGCCCAGTCTAAGGCCCCAATCCTGAGAAACTaGCTGGGTTCCTGCCCTTTGATTCAGAGAAAGCAGCTTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSVYTAQSKAPILRN*LGSCPLIQRKQLSS Trigger: GCTGGAAAGCTGCTTTCTCTGAATCAAAGGGCAGGAACCCAGCAAGTTTCTCAGGATTGGGGCCTTAGACTGGGCTGTGTATACAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 72 bp | TGGAGCACCAGGTTAAAGGAAACTGAACTGTGGGGTTaGCTGGCACTGTCTGTATACACAGCCCAGTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSTRLKETELWG*LALSVYTAQSK Trigger: CTTAGACTGGGCTGTGTATACAGACAGTGCCAGCCAACCCCACAGTTCAGTTTCCTTTAACCTGGTGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 72 bp | TACACAGCCCAGTCTAAGGCCCCAATCCTGAGAAACTaGCTGGGTTCCTGCCCTTTGATTCAGAGAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YTAQSKAPILRN*LGSCPLIQRKQ Trigger: CTGCTTTCTCTGAATCAAAGGGCAGGAACCCAGCAAGTTTCTCAGGATTGGGGCCTTAGACTGGGCTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 90 bp | TCTTCCCAGAGTAGAACAGGGGAAGCTGAACACCTGCAGGATATCTaGGGAATGACATTCAAAAAGCTACAGCTGTCCCAGCTGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSQSRTGEAEHLQDI*GMTFKKLQLSQLSQ Trigger: CTGGCTCAGCTGGGACAGCTGTAGCTTTTTGAATGTCATTCCCAAGATATCCTGCAGGTGTTCAGCTTCCCCTGTTCTACTCTGGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS TCA 72 bp | CACAGTTATTGCCTGGAGCACCAGGTTAAAGGAAACTaGACTGTGGGGTTGGCTGGCACTGTCTGTATACAC | + |
|
Preference number: 6 (lower is better) Translates to: HSYCLEHQVKGN*TVGLAGTVCIH Trigger: GTGTATACAGACAGTGCCAGCCAACCCCACAGTTCAGTTTCCTTTAACCTGGTGCTCCAGGCAATAACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 72 bp | CAGCCTGCTGGGAAAGTGGGCTCATTCCTTGTACATTaGTACATTTTGGGGGTAGGTCAGGAATCAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QPAGKVGSFLVH*YILGVGQESGD Trigger: GTCTCCTGATTCCTGACCTACCCCCAAAATGTACAAATGTACAAGGAATGAGCCCACTTTCCCAGCAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 72 bp | CAAGGTGGTTTCCTCTTAGCTCTTGGGGAGTCTCTGTaGATACCTCCCTCTTGGTGTCTATACCAGTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGGFLLALGESL*IPPSWCLYQFC Trigger: GCAAAACTGGTATAGACACCAAGAGGGAGGTATCAACAGAGACTCCCCAAGAGCTAAGAGGAAACCACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 90 bp | CAGCCTGCTGGGAAAGTGGGCTCATTCCTTGTACATTTGTACATTTaGGGGGTAGGTCAGGAATCAGGAGACACAGAATGCCTTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: QPAGKVGSFLVHLYI*GVGQESGDTECLLV Trigger: AACAAGAAGGCATTCTGTGTCTCCTGATTCCTGACCTACCCCCAAAATGTACAAATGTACAAGGAATGAGCCCACTTTCCCAGCAGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 90 bp | CTGGTATTACAGCCTGCTGGGAAAGTGGGCTCATTCCTTGTACATTaGTACATTTTGGGGGTAGGTCAGGAATCAGGAGACACAGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: LVLQPAGKVGSFLVH*YILGVGQESGDTEC Trigger: GCATTCTGTGTCTCCTGATTCCTGACCTACCCCCAAAATGTACAAATGTACAAGGAATGAGCCCACTTTCCCAGCAGGCTGTAATACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS TCA 72 bp | CGTAGGGCATGCCAAACCCTTCCCTTATTAACTATTTaGCTCTTCCTACAGGCCCAAACATATTACCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRACQTLPLLTI*LFLQAQTYYLG Trigger: GCCCAGGTAATATGTTTGGGCCTGTAGGAAGAGTCAAATAGTTAATAAGGGAAGGGTTTGGCATGCCCTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 72 bp | AGTAGAACAGGGGAAGCTGAACACCTGCAGGATATCTaGGGAATGACATTCAAAAAGCTACAGCTGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRTGEAEHLQDI*GMTFKKLQLSQ Trigger: CTGGGACAGCTGTAGCTTTTTGAATGTCATTCCCAAGATATCCTGCAGGTGTTCAGCTTCCCCTGTTCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS TCA 72 bp | CTCTTCCTACAGGCCCAAACATATTACCTGGGCAGTTaGGAAACGAGAACAGTTGTGGGACAAAGAACACAT | + |
|
Preference number: 6 (lower is better) Translates to: LFLQAQTYYLGS*ETRTVVGQRTH Trigger: ATGTGTTCTTTGTCCCACAACTGTTCTCGTTTCTCAACTGCCCAGGTAATATGTTTGGGCCTGTAGGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 72 bp | TATAGGCCAAACTGGTATTACAGCCTGCTGGGAAAGTaGGCTCATTCCTTGTACATTTGTACATTTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: YRPNWYYSLLGK*AHSLYICTFWG Trigger: CCCCCAAAATGTACAAATGTACAAGGAATGAGCCCACTTTCCCAGCAGGCTGTAATACCAGTTTGGCCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS TCA 72 bp | GAGTTTATTCGTCCCTCTGTTTTATGGATAGGGAGCTaGGATAGGAAGAGGTTAAGCAATTTGACCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EFIRPSVLWIGS*DRKRLSNLTRV Trigger: GACCCTGGTCAAATTGCTTAACCTCTTCCTATCTCAGCTCCCTATCCATAAAACAGAGGGACGAATAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 72 bp | CTATTTGACTCTTCCTACAGGCCCAAACATATTACCTaGGCAGTTGAGAAACGAGAACAGTTGTGGGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LFDSSYRPKHIT*AVEKREQLWDK Trigger: TTTGTCCCACAACTGTTCTCGTTTCTCAACTGCCCAGGTAATATGTTTGGGCCTGTAGGAAGAGTCAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 72 bp | CTTAGCTCTTGGGGAGTCTCTGTTGATACCTCCCTCTaGGTGTCTATACCAGTTTTGCAAACTTTAGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSWGVSVDTSL*VSIPVLQTLAY Trigger: GTATGCTAAAGTTTGCAAAACTGGTATAGACACCAAGAGGGAGGTATCAACAGAGACTCCCCAAGAGCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 72 bp | CATGCAATAAGAGCAGGAAAAGAAGCTTGTAATCATTaGGACGACGCCTTCATTTCCCAGATGCAGAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: HAIRAGKEACNH*DDAFISQMQRT Trigger: CGTTCTCTGCATCTGGGAAATGAAGGCGTCGTCCAAATGATTACAAGCTTCTTTTCCTGCTCTTATTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CAA 90 bp | TGGTTTCCTCTTAGCTCTTGGGGAGTCTCTGTTGATACCTCCCTCTaGGTGTCTATACCAGTTTTGCAAACTTTAGCATACCTAGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: WFPLSSWGVSVDTSL*VSIPVLQTLAYLAI Trigger: AATTGCTAGGTATGCTAAAGTTTGCAAAACTGGTATAGACACCAAGAGGGAGGTATCAACAGAGACTCCCCAAGAGCTAAGAGGAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS GCA 72 bp | CAATGCATTGATATAGGCCAAACTGGTATTACAGCCTaGTGGGAAAGTGGGCTCATTCCTTGTACATTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: QCIDIGQTGITA*WESGLIPCTFV Trigger: TACAAATGTACAAGGAATGAGCCCACTTTCCCAGCAGGCTGTAATACCAGTTTGGCCTATATCAATGCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS TCA 72 bp | AAATTCTTTGTACTTTTCTCAGTGCCTTTCATCTGCTaGGCTCAAAGGACGATGAGGGTATTAACTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KFFVLFSVPFIC*AQRTMRVLTLA Trigger: AGCCAGAGTTAATACCCTCATCGTCCTTTGAGCTCAGCAGATGAAAGGCACTGAGAAAAGTACAAAGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS TCA 72 bp | CACCTTTTAGAAGTTCAGGGACCACATAAATGTTGGTaGTGGATGTTTTCCTCAGGGATGATTATGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLLEVQGPHKCW*WMFSSGMIMAL Trigger: AAGAGCCATAATCATCCCTGAGGAAAACATCCATCACCAACATTTATGTGGTCCCTGAACTTCTAAAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||
| CDS CCA 72 bp | CATATTACCTGGGCAGTTGAGAAACGAGAACAGTTGTaGGACAAAGAACACATTGTTAAATTGCAGAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HITWAVEKREQL*DKEHIVKLQSC Trigger: GCAACTCTGCAATTTAACAATGTGTTCTTTGTCCCACAACTGTTCTCGTTTCTCAACTGCCCAGGTAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630920.1 |
||