RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CC2D2A (Homo sapiens)

Ensembl gene IDs: ENSG00000048342

Ensembl transcript IDs: ENST00000389652.11, ENST00000424120.6, ENST00000503292.6, ENST00000503658.2, ENST00000506643.5, ENST00000507954.5, ENST00000510220.1, ENST00000511544.6, ENST00000512202.1, ENST00000512702.6, ENST00000513811.5, ENST00000514450.3, ENST00000515124.6, ENST00000634028.2, ENST00000650860.2, ENST00000651385.1, ENST00000652443.1, ENST00000674945.1, ENST00000675619.1, ENST00000675768.1, ENST00000676337.1, ENST00000680586.1

Found 1126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTaGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTC +
Preference number: 1 (lower is better)
Translates to: RAWPAQALFNNQLSP*ASPDCHTQEAGLGL
Trigger: GAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR TCA 90 bp GCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTaGAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: AVRAWGSSMLFTEHP*RPRRLLEFAHCRLP
Trigger: AGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 90 bp TGTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTaGACATCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTG +
Preference number: 1 (lower is better)
Translates to: CGLGCTCLGKQHAFH*TSLKTSTAAGICSL
Trigger: CAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR CCA 90 bp CGCACAATGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTaGGCTGTCACCTTCTTCCGACCTTTTCTCCTTGGCCGCAGTGGT +
Preference number: 1 (lower is better)
Translates to: RTMFTSSFMSPSDRF*AVTFFRPFLLGRSG
Trigger: ACCACTGCGGCCAAGGAGAAAAGGTCGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACATTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 90 bp TTCTGCAGACTGTGCAATAAGCATGGTGCCAGCATCTGCCTCTGGTaGGGCCTTAGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAA +
Preference number: 1 (lower is better)
Translates to: FCRLCNKHGASICLW*GLRKLSLMSEGEGE
Trigger: TTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCTAAGGCCTCACCAGAGGCAGATGCTGGCACCATGCTTATTGCACAGTCTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
3UTR TCA 90 bp CTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTaGAAAGAGACTTCTACAAAGGGACGTACTAAAACCTGGCCGAGG +
Preference number: 1 (lower is better)
Translates to: LGFGPSAVVVWQTVR*KETSTKGRTKTWPR
Trigger: CCTCGGCCAGGTTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 90 bp AAGAAATTGATCAGATGTGCTCCAGAGGTCACAGATACCACCAAATaGGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGC +
Preference number: 1 (lower is better)
Translates to: KKLIRCAPEVTDTTK*DSVRQEGNQGHISS
Trigger: GCTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCACATCTGATCAATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR CCA 90 bp AATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATaGATTCCACTTCCTCTTTCACGGTCATCCTCTAAGACATCATGC +
Preference number: 1 (lower is better)
Translates to: NGIFTHPSQCLSIRV*IPLPLSRSSSKTSC
Trigger: GCATGATGTCTTAGAGGATGACCGTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR CCA 90 bp CCGCTCAAGAATCATATTTCGCTCCTTACTGTAGCCCAGAAGAACTaGGGGAATATCTATTTTAAATGTTCCATCAATCCTTGCTTGGAA +
Preference number: 1 (lower is better)
Translates to: PLKNHISLLTVAQKN*GNIYFKCSINPCLE
Trigger: TTCCAAGCAAGGATTGATGGAACATTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTACAGTAAGGAGCGAAATATGATTCTTGAGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR GCA 90 bp TTTTCAAGGGACAGAATGTATCAAATTGTCCATAAAAATGTCCACTaGAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGTTAGCA +
Preference number: 1 (lower is better)
Translates to: FSRDRMYQIVHKNVH*RDSILNNDLAPKLA
Trigger: TGCTAACTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATGGACAATTTGATACATTCTGTCCCTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR CCA 90 bp TTTAAATGTTCCATCAATCCTTGCTTGGAAATATATTGTGCTAAATaGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATG +
Preference number: 1 (lower is better)
Translates to: FKCSINPCLEIYCAK*HFHTSQPVSLNTSM
Trigger: CATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCATTTAGCACAATATATTTCCAAGCAAGGATTGATGGAACATTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 90 bp ATGGAAGGCTTCTTGAAAAGAAAGATTTCCATAGCTTGGGCCTGGTaGCATCAAAATTTATCCTTAGTGGAGATTCATATCGTTGAATAT +
Preference number: 1 (lower is better)
Translates to: MEGFLKRKISIAWAW*HQNLSLVEIHIVEY
Trigger: ATATTCAACGATATGAATCTCCACTAAGGATAAATTTTGATGTCACCAGGCCCAAGCTATGGAAATCTTTCTTTTCAAGAAGCCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR CAA 90 bp TCTCTCCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGGAT +
Preference number: 2 (lower is better)
Translates to: SLRGPLRTVILRRRV*GSSCTGSWGLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGGAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR-3UTR GCA 90 bp GCTCTCTCCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 2 (lower is better)
Translates to: ALSVGLSGLSYSGGGSWAQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...AGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGGAGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR-3UTR GCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGGAAGACCTCGACGGCTaGTGGAATTTGCTCACTGCC +
Preference number: 2 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKEDLDG*WNLLTA
Trigger: GGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTC...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CCA 90 bp TTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCAGTGAGTCACCGTGCCTaGCCTGCCCAGGCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: LCQKGKGKQVCRMVREGAVSHRA*PAQALF
Trigger: AAAAAGAGCCTGGGCAGGCCAGGCACGGTGACTCAC...TGCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR-3UTR CCA 90 bp TTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCACGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: LCQKGKGKQVCRMVREGARTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...TGCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTCTCCTTGGCCGCAGTaGTCGCTTTTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPSPWPQ*SLLFCQ
Trigger: CTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR CAA 90 bp TCGCACAATGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTaGGGCTGTCACCTTCTTCCGACCTTTTCTCCTTGGCCGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SHNVHQQLYVSIRQV*GCHLLPTFSPWPQW
Trigger: CCACTGCGGCCAAGGAGAAAAGGTCGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACATTGTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACGACCTCGACGGCTGCTaGAATTTGCTCACTGCCGGC +
Preference number: 2 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHDLDGC*NLLTAG
Trigger: GCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTC...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR GCA 90 bp GGTAAATTAGCTCTTCAGGCTGAACACTGGAAAGGCCAGGATATGGAAGGCTTCGAAGACCTCGACGGCTaGTGGAATTTGCTCACTGCC +
Preference number: 2 (lower is better)
Translates to: GKLALQAEHWKGQDMEGFEDLDG*WNLLTA
Trigger: GGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTC...GAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR CCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAACCGAGTCAGATGGCGTaGCCTCCAGTCCATGATTTT +
Preference number: 2 (lower is better)
Translates to: CSRGHRYHQMRQCQARREPSQMA*PPVHDF
Trigger: AAAATCATGGACTGGAGGCCACGCCATCTGACTCGG...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTCCACCGAGTCAGATaGCGTGGCCTCCAGTCCATG +
Preference number: 2 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLFHRVR*RGLQSM
Trigger: CATGGACTGGAGGCCACGCCATCTGACTCGGTGGAA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
3UTR-3UTR CCA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGTTCCACCGAGTCAGATaGCGTGGCCTCCAGTCCATG +
Preference number: 2 (lower is better)
Translates to: YHQMRQCQARRESRTHIEFHRVR*RGLQSM
Trigger: CATGGACTGGAGGCCACGCCATCTGACTCGGTGGAA...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR CCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACCCGACCTTTTCTCCTTaGCCGCAGTGGTCGCTTTTG +
Preference number: 2 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHPTFSP*PQWSLL
Trigger: CAAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGG...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR GCA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCTTTGGCTCACTGTTCTaGAGACTGTGCAATAAGCAT +
Preference number: 2 (lower is better)
Translates to: LMSEGEGETGVSHGERGSFGSLF*RLCNKH
Trigger: ATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAA...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
3UTR-3UTR CCA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGATGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 2 (lower is better)
Translates to: LSLMSEGEGETGVSHGERWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR-3UTR TCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAAAACAGAGGCAAGAAGTaGCGCAGAGTAGAGGTACAA +
Preference number: 2 (lower is better)
Translates to: CSRGHRYHQMRQCQARRENRGKK*RRVEVQ
Trigger: TTGTACCTCTACTCTGCGTCACTTCTTGCCTCTGTT...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR CCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCCGAGTCAGATGGCGTaGCCTCCAGTCCATGATTTT +
Preference number: 2 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLPSQMA*PPVHDF
Trigger: AAAATCATGGACTGGAGGCCACGCCATCTGACTCGG...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
3UTR-3UTR CCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTGGGCTGTACGTGCTTaGGGAAGCAGCATGCTTTTC +
Preference number: 2 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFWAVRA*GSSMLF
Trigger: GAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCATTCCAGCTAGGGTTTaGTCCTTCAGCCGTAGTCGT +
Preference number: 2 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFIPARV*SFSRSR
Trigger: ACGACTACGGCTGAAGGACCAAACCCTAGCTGGAAT...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR TCA 90 bp GAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCATGGTGAGGTGTGTCGCATGGTaGGAGAGGGAGCAAGAGAGA +
Preference number: 2 (lower is better)
Translates to: EKRFILAHCSADCAISMVRCVAW*EREQER
Trigger: TCTCTCTTGCTCCCTCTCTCACCATGCGACACACCT...CACCATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
3UTR-3UTR TCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCCAGCATGCTTTTCACTaGACATCCTTGAAGACCTCG +
Preference number: 2 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFQHAFH*TSLKTS
Trigger: CGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTG...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR GCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACCTGGAATTTGCTCACTaGCGGCTTCCTCACTGGAAT +
Preference number: 2 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHLEFAH*RLPHWN
Trigger: ATTCCAGTGAGGAAGCCGGCAGTGAGCAAATTCCAG...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGGACCTCGACGGCTGCTaGAATTTGCTCACTGCCGGC +
Preference number: 2 (lower is better)
Translates to: HIQLETSQLLEVISHLPEDLDGC*NLLTAG
Trigger: GCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTC...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR TCA 90 bp CAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGTTTGTTCTGCCAGCTTaGAAAGGCTTAGGCCCAAAA +
Preference number: 2 (lower is better)
Translates to: QRSQIPPNETVSGKKGIKFVLPA*KGLGPK
Trigger: TTTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAA...CTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR GCA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTTTTGGCTCACTGTTCTaGAGACTGTGCAATAAGCAT +
Preference number: 2 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGFGSLF*RLCNKH
Trigger: ATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAA...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
3UTR-3UTR GCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGCTGGAATTTGCTCACTaGCGGCTTCCTCACTGGAAT +
Preference number: 2 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLLEFAH*RLPHWN
Trigger: ATTCCAGTGAGGAAGCCGGCAGTGAGCAAATTCCAG...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGTAGCCCAGAAGAACTaGGGGAATATCTATTTTAAA +
Preference number: 2 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPVAQKN*GNIYFK
Trigger: TTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTAC...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR TCA 90 bp TTGCTTCCAAAGGCCTCTAGTTTCCAACAGTTACTTATTTCCCAACTTTGCCATAGCATCTGCCTCTGGTaGGGCCTTAGGAAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: LLPKASSFQQLLISQLCHSICLW*GLRKLS
Trigger: TGAAAGCTTCCTAAGGCCTCACCAGAGGCAGATGCT...ATGGCAAAGTTGGGAAATAAGTAACTGTTGGAAACTAGAGGCCTTTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515124.6
3UTR-3UTR TCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGTTCACTGAACATCCTTaGAGACCTCGACGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKFTEHP*RPRRLL
Trigger: CAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAA...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR GCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCCTTGGGGAAGCAGCATaGTTTTCACTGAACATCCTT +
Preference number: 2 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFLGEAA*FSLNIL
Trigger: AAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAG...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAATCTCCTTGGCCGCAGTaGTCGCTTTTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKSPWPQ*SLLFCQ
Trigger: CTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGA...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCACTTGGAGACCTTGTaGGAACAGTTTTCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIHLETL*EQFSRP
Trigger: GGGCCTAGAAAACTGTTCTCACAAGGTCTCCAAGTG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR TCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTTTGTTCTGCCAGCTTaGAAAGGCTTAGGCCCAAAA +
Preference number: 2 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCFVLPA*KGLGPK
Trigger: TTTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAA...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR GCA 90 bp GGTAAATTAGCTCTTCAGGCTGAACACTGGAAAGGCCAGGATATGGAAGGCTTCACATCTGTAATTCAATaGCCAGGCATTACACATACG +
Preference number: 2 (lower is better)
Translates to: GKLALQAEHWKGQDMEGFTSVIQ*PGITHT
Trigger: CGTATGTGTAATGCCTGGGCATTGAATTACAGATGT...GAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR CCA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTAAAAGAGGTTTATTTTaGCTCACTGTTCTGCAGACT +
Preference number: 2 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGKRGLF*LTVLQT
Trigger: AGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTT...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
3UTR CAA 90 bp CTTTCAGAGATACACTGTAAGAAGCAGCTCGTGGGTTTTATAGATTaGCAAAGAGTAGAGCTAGCTCCCAGTATGCAGGTGACATTCAGA +
Preference number: 2 (lower is better)
Translates to: LSEIHCKKQLVGFID*QRVELAPSMQVTFR
Trigger: TCTGAATGTCACCTGCATACTGGGAGCTAGCTCTACTCTTTGCAAATCTATAAAACCCACGAGCTGCTTCTTACAGTGTATCTCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCACTTGGAGACCTTGTaGGAACAGTTTTCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGHLETL*EQFSRP
Trigger: GGGCCTAGAAAACTGTTCTCACAAGGTCTCCAAGTG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR TCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTCACAACATCTTTCACTaGCTGCAGACTGGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCHNIFH*LQTGCA
Trigger: AGCACAGCCAGTCTGCAGTCAGTGAAAGATGTTGTG...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR GCA 90 bp GAAAAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTTTTGGCTCACTGTTCTaGAGACTGTGCAATAAGCAT +
Preference number: 2 (lower is better)
Translates to: EKQCLKGGHFPYNEQVIPFGSLF*RLCNKH
Trigger: ATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAA...AGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515124.6
3UTR-3UTR CCA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGCTCTCAATACGAGTATaGATTCCACTTCCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: YHQMRQCQARRESRTHIELSIRV*IPLPLS
Trigger: TGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAG...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR GCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACTCCTCTAAGACATCATaGAGTACTTCATCAAAAATG +
Preference number: 2 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHSSKTS*STSSKM
Trigger: CATTTTTGATGAAGTACTGCATGATGTCTTAGAGGA...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR GCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCTCCTCTAAGACATCATaGAGTACTTCATCAAAAATG +
Preference number: 2 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFSSKTS*STSSKM
Trigger: CATTTTTGATGAAGTACTGCATGATGTCTTAGAGGA...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR TCA 90 bp CCTCTAGTTTCCAACAGTTACTTATTTCCCAACTTTGCCATAGGGAAAACAGTCCTAATCCACTTTTCATaGAAAGCAATGCCTGAAGGG +
Preference number: 2 (lower is better)
Translates to: PLVSNSYLFPNFAIGKTVLIHFS*KAMPEG
Trigger: CCCTTCAGGCATTGCTTTTCATGAAAAGTGGATTAG...GACTGTTTTCCCTATGGCAAAGTTGGGAAATAAGTAACTGTTGGAAACTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
3UTR-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCAAGTATCCAAGACACTaGAGACTTAGACTCCACTCA +
Preference number: 2 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIKYPRH*RLRLHS
Trigger: TGAGTGGAGTCTAAGTCTTCAGTGTCTTGGATACTT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR CCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGTCATCTTTTCTCGAATaGACTCTCCAGGAACCAGCT +
Preference number: 2 (lower is better)
Translates to: HIQLETSQLLEVISHLPESSFLE*TLQEPA
Trigger: AGCTGGTTCCTGGAGAGTCCATTCGAGAAAAGATGA...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR CAA 90 bp AGGCCAGGATATGGAAGGCTTCTTGAAAAGAAAGATTTCCATAGCTaGGGCCTGGTGACATCAAAATTTATCCTTAGTGGAGATTCATAT +
Preference number: 2 (lower is better)
Translates to: RPGYGRLLEKKDFHS*GLVTSKFILSGDSY
Trigger: ATATGAATCTCCACTAAGGATAAATTTTGATGTCACCAGGCCCAAGCTATGGAAATCTTTCTTTTCAAGAAGCCTTCCATATCCTGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTCACGTTGGGATATTaGAGATTCCAGTGTACAACA +
Preference number: 2 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFTLGY*RFQCTT
Trigger: TGTTGTACACTGGAATCTTCAATATCCCAACGTGAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAACTCGGAGGCTGACTaGCTTTATTTGAATTCTCAT +
Preference number: 2 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSNSEAD*LYLNSH
Trigger: ATGAGAATTCAAATAAAGTCAGTCAGCCTCCGAGTT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAATGAACTCGGAGGCTaGCTGACTTTATTTGAATTC +
Preference number: 2 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSNELGG*LTLFEF
Trigger: GAATTCAAATAAAGTCAGTCAGCCTCCGAGTTCATT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTACATTAGCAGAAGTTTaGAACCAAGACTGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSTLAEV*NQDCEK
Trigger: CTTCTCACAGTCTTGGTTTCAAACTTCTGCTAATGT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCACATTAGCAGAAGTTTaGAACCAAGACTGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: QLLCCLTITTIHLQSFFITLAEV*NQDCEK
Trigger: CTTCTCACAGTCTTGGTTTCAAACTTCTGCTAATGT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTGTGCCTTGAAAATTaGTTACTTAGTGCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLCLEN*LLSAGE
Trigger: TTCCCCTGCACTAAGTAAGCAATTTTCAAGGCACAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR CCA 90 bp CTCAGAAACCTCCCTCATTTCTTCCAAACATCTGATTCAAGCCTCACTAGGTTAAAAAGAGGTTTATTTTaGCTCACTGTTCTGCAGACT +
Preference number: 2 (lower is better)
Translates to: LRNLPHFFQTSDSSLTRLKRGLF*LTVLQT
Trigger: AGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTT...TAACCTAGTGAGGCTTGAATCAGATGTTTGGAAGAAATGAGGGAGGTTTCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515124.6
3UTR-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTCACGTTGGGATATTaGAGATTCCAGTGTACAACA +
Preference number: 2 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGFTLGY*RFQCTT
Trigger: TGTTGTACACTGGAATCTTCAATATCCCAACGTGAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTAATGAACTCGGAGGCTaGCTGACTTTATTTGAATTC +
Preference number: 2 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGNELGG*LTLFEF
Trigger: GAATTCAAATAAAGTCAGTCAGCCTCCGAGTTCATT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGGGTATGGTACTTGTaGCTTGAAAATTGCTTACTT +
Preference number: 2 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSRVWYL*LENCLL
Trigger: AAGTAAGCAATTTTCAAGGCACAAGTACCATACCCT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR CCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGCAGTTCTGCTCTGTaGTCATCTTCTACATCTTCT +
Preference number: 2 (lower is better)
Translates to: GTSILCTPVLYTASIKGFSSSAL*SSSTSS
Trigger: AGAAGATGTAGAAGATGACCACAGAGCAGAACTGCT...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
3UTR-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTCTCATTTTTCACGTTaGGATATTGAAGATTCCAGT +
Preference number: 2 (lower is better)
Translates to: QLLCCLTITTIHLQSFFISHFSR*DIEDSS
Trigger: ACTGGAATCTTCAATATCCCAACGTGAAAAATGAGA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR CAA 90 bp ATTGCTTTTAGATTAGAACCACATTTTTCCAATCTAAGAGTCTACTaGCTTCCAAAGGCCTCTAGTTTCCAACAGTTACTTATTTCCCAA +
Preference number: 2 (lower is better)
Translates to: IAFRLEPHFSNLRVY*LPKASSFQQLLISQ
Trigger: TTGGGAAATAAGTAACTGTTGGAAACTAGAGGCCTTTGGAAGCAAGTAGACTCTTAGATTGGAAAAATGTGGTTCTAATCTAAAAGCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515124.6
3UTR-3UTR CAA 90 bp GTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGGCCTCTCACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 3 (lower is better)
Translates to: VPGLPRLFLTTSSLRGPLTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...GAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR CCA 72 bp CCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTaGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGT +
Preference number: 3 (lower is better)
Translates to: PAQALFNNQLSP*ASPDCHTQEAG
Trigger: ACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR-3UTR CAA 90 bp TTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 3 (lower is better)
Translates to: FHLCQKGKGKQVCRMVRELRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...CTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR-3UTR CAA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTCCGACCTTTTCTCCTaGGCCGCAGTGGTCGCTTTT +
Preference number: 3 (lower is better)
Translates to: LPASSLECRKLAQCSPAASDLFS*AAVVAF
Trigger: AAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGGA...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR CCA 72 bp CGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTaGAATGTCGTAAGCTCGCACAATGTTCACCAGCAG +
Preference number: 3 (lower is better)
Translates to: RLLEFAHCRLPH*NVVSSHNVHQQ
Trigger: CTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTCCGCAGTGGTCGCTTTaGTTCTGCCAGCTTGAAAAG +
Preference number: 3 (lower is better)
Translates to: LPASSLECRKLAQCSPAAPQWSL*FCQLEK
Trigger: CTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGG...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTCCGACCTTTTCTCCTaGGCCGCAGTGGTCGCTTTT +
Preference number: 3 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPSDLFS*AAVVAF
Trigger: AAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGGA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTTCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGSDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR TCA 72 bp GCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTaGAGACCTCGACGGCTGCTGGAATTTGCTCACTGC +
Preference number: 3 (lower is better)
Translates to: AWGSSMLFTEHP*RPRRLLEFAHC
Trigger: GCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR GCA 72 bp TGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCTaGTGGAATTTGCTCACTGCCGGCTTCCTCACTGGA +
Preference number: 3 (lower is better)
Translates to: CFSLNILEDLDG*WNLLTAGFLTG
Trigger: TCCAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACGACGGCTGCTGGAATTaGCTCACTGCCGGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHDGCWN*LTAGFL
Trigger: GAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTC...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 72 bp CTGTGCAATAAGCATGGTGCCAGCATCTGCCTCTGGTaGGGCCTTAGGAAGCTTTCACTTATGTCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: LCNKHGASICLW*GLRKLSLMSEG
Trigger: CCCTTCTGACATAAGTGAAAGCTTCCTAAGGCCTCACCAGAGGCAGATGCTGGCACCATGCTTATTGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
3UTR-3UTR CAA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTCCGCAGTGGTCGCTTTaGTTCTGCCAGCTTGAAAAG +
Preference number: 3 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGPQWSL*FCQLEK
Trigger: CTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGG...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR-3UTR CAA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCTCCATCAGACAGGTTTaGGGCTGTCACCTTCTTCCG +
Preference number: 3 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFSIRQV*GCHLLP
Trigger: CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGA...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTCCATCAGACAGGTTTaGGGCTGTCACCTTCTTCCG +
Preference number: 3 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHSIRQV*GCHLLP
Trigger: CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGA...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTGGGCTGTACGTGCTaGGGGAAGCAGCATGCTTTT +
Preference number: 3 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHLGCTC*GKQHAF
Trigger: AAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAA...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTTGGGCTGTACGTGCTaGGGGAAGCAGCATGCTTTT +
Preference number: 3 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCLGCTC*GKQHAF
Trigger: AAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAA...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTAGTCAGCATTGTGGGTaGGGCTGTACGTGCTTGGGG +
Preference number: 3 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCSQHCG*GCTCLG
Trigger: CCCCAAGCACGTACAGCCCAACCCACAATGCTGACT...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 72 bp ATTGTAGGGTCTAACCCAGAGCTACAGGGAGCCATGTaGATTCAGTACTTGGGATTTCAACTCAGACGTGGA +
Preference number: 3 (lower is better)
Translates to: IVGSNPELQGAM*IQYLGFQLRRG
Trigger: TCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAGACCCTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
3UTR CCA 72 bp TTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATaGATTCCACTTCCTCTTTCACGGTCATCCTCTAAG +
Preference number: 3 (lower is better)
Translates to: FTHPSQCLSIRV*IPLPLSRSSSK
Trigger: CTTAGAGGATGACCGTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTTTTGTTCTGCCAGCTaGAAAAGGCTTAGGCCCAAA +
Preference number: 3 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFFCSAS*KRLRPK
Trigger: TTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 72 bp GGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTaGAAAGAGACTTCTACAAAGGGACGTACTAAAACC +
Preference number: 3 (lower is better)
Translates to: GPSAVVVWQTVR*KETSTKGRTKT
Trigger: GGTTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGTTTTGTTCTGCCAGCTaGAAAAGGCTTAGGCCCAAA +
Preference number: 3 (lower is better)
Translates to: HIQLETSQLLEVISHLPEFCSAS*KRLRPK
Trigger: TTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAA...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCACTTCACAGCAAATTaGCAAGAAGTATCCAAGACA +
Preference number: 3 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSHFTAN*QEVSKT
Trigger: TGTCTTGGATACTTCTTGCAAATTTGCTGTGAAGTG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTATAGGGTATGGTACTaGTGCCTTGAAAATTGCTTA +
Preference number: 3 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIYRVWY*CLENCL
Trigger: TAAGCAATTTTCAAGGCACAAGTACCATACCCTATA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR GCA 72 bp GACAGAATGTATCAAATTGTCCATAAAAATGTCCACTaGAGGGATTCCATATTAAATAACGACCTTGCTCCC +
Preference number: 3 (lower is better)
Translates to: DRMYQIVHKNVH*RDSILNNDLAP
Trigger: GGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATGGACAATTTGATACATTCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR CCA 72 bp AATCATATTTCGCTCCTTACTGTAGCCCAGAAGAACTaGGGGAATATCTATTTTAAATGTTCCATCAATCCT +
Preference number: 3 (lower is better)
Translates to: NHISLLTVAQKN*GNIYFKCSINP
Trigger: AGGATTGATGGAACATTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTACAGTAAGGAGCGAAATATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
3UTR TCA 72 bp TTCTTGAAAAGAAAGATTTCCATAGCTTGGGCCTGGTaGCATCAAAATTTATCCTTAGTGGAGATTCATATC +
Preference number: 3 (lower is better)
Translates to: FLKRKISIAWAW*HQNLSLVEIHI
Trigger: GATATGAATCTCCACTAAGGATAAATTTTGATGTCACCAGGCCCAAGCTATGGAAATCTTTCTTTTCAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
3UTR CAA 72 bp GGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GPLRTVILRRRV*GSSCTGSWGLP
Trigger: TGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp AGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: RRRVLGSSCTGSWGLPRWSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...CCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR GCA 90 bp ACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGTTACCCTGCACGGGATaGTCCCAGCCTAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TVILRRRVLGSSCTGSWGLPCTG*SQPRRG
Trigger: TCCCCTCCTAGGCTGGGAGCATCCCGTGCAGGGTAA...CCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGTCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKSGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp ACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGACTCCCAACCTCAGGTaGTTTACCCGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: TVILRRRVLGSSCTGSWGTPNLR*FTRLGL
Trigger: AAGGCCGAGGCGGGTAAATCACCTGAGGTTGGGAGT...CCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp GCTCTCTCCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTGTGAGTCACCGTGCCTaGCCTGCCCAGGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: ALSVGLSGLSYSGGGSWAVSHRA*PAQALF
Trigger: AAAAAGAGCCTGGGCAGGCCAGGCACGGTGACTCAC...AGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGGAGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp GTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGGCCTCTCTGTTGGAGATGCCCCTaGGCTCCTCCCTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VPGLPRLFLTTSSLRGPLCWRCP*APPWEA
Trigger: AGCTTCCCAGGGAGGAGCCCAGGGGCATCTCCAACA...GAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR TCA 90 bp ATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGCATCTGCCTCTGGTaGGGCCTTAGGAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ILRRRVLGSSCTGSWGLPSICLW*GLRKLS
Trigger: TGAAAGCTTCCTAAGGCCTCACCAGAGGCAGATGCT...TGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp AGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGTTCTGCATTCTAGGATaGAAGTGGAGAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: RRRVLGSSCTGSWGLPRWFCILG*KWRETV
Trigger: CACCGTCTCTCTCCACTTCCATCCTAGAATGCAGAA...CCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp TCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGGATTTTTCGGACACCATTACTCCTGCGGAGAGGTaGGGGAGGATCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSCTGSWGLPRWDFSDTITPAER*GRICQQ
Trigger: CTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGT...AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp GTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGGCCTCTCAACCAGCTCTCTCCGTaGGCCTCTCCGGACTGTCAT +
Preference number: 4 (lower is better)
Translates to: VPGLPRLFLTTSSLRGPLNQLSP*ASPDCH
Trigger: ATGACAGTCCGGAGAGGCCCACGGAGAGAGCTGGTT...GAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
3UTR CAA 72 bp CGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCGGACACCATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RVLGSSCTGSWG*PRWDFSDTISL
Trigger: CAAGGAAATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR TCA 90 bp TCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGGATTTTTCGGACACCATTTCCGGAGGGAAAGGCTaGGTGTTGGAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSCTGSWGLPRWDFSDTISGGKG*VLEMPL
Trigger: CAGGGGCATCTCCAACACTCAGCCTTTCCCTCCGGA...AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR TCA 90 bp ACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGCAGCAGTTGGTGGCTTaGAAAGATTTACCCTGCACG +
Preference number: 4 (lower is better)
Translates to: TVILRRRVLGSSCTGSWGQQLVA*KDLPCT
Trigger: CGTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTG...CCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACCCAAGGCCTCCTCCTaGTCTGGGCTGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPPKASS*SGLLSP
Trigger: GGGAGAGAGCAGCCCAGAGCAGGAGGAGGCCTTGGG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCCCCAAGGCCTCCTCCTaGTCTGGGCTGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGPKASS*SGLLSP
Trigger: GGGAGAGAGCAGCCCAGAGCAGGAGGAGGCCTTGGG...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAASGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGATTCTAGGATGGAAGTaGAGAGAGACGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PWASPDCHTQEAGLGLLLILGWK*RETVLL
Trigger: CAACAGCACCGTCTCTCTCCACTTCCATCCTAGAAT...CAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCACTCCTGCGGAGAGGTaGGGGAGGATCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LMSEGEGETGVSHGERGSTPAER*GRICQQ
Trigger: CTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGT...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000652443.1
CDS-3UTR TCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGCCTTCCTCCTCCTCTTaGTTAGTTCCCGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKPSSSS*LVPALC
Trigger: ACATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGG...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTCCGGAGGGAAAGGCTaGGTGTTGGAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAASGGKG*VLEMPL
Trigger: CAGGGGCATCTCCAACACTCAGCCTTTCCCTCCGGA...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR GCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGCTTCTTTCGGGGTCCTaGATCAGCAATCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKLLSGS*ISNLFS
Trigger: GGAGAACAGATTGCTGATGCAGGACCCCGAAAGAAG...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGTTCTTCTTGGCCCTTTaGACTTTCCTCCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKFFLAL*TFLQAF
Trigger: GAAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAA...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGTCACCGTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGCGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHRAWPAQALFNNQLSPWRTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...CCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCACGGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp CACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGATCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: HLCQKGKGKQVCRMVREGSGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...TCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp TTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCATCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LCQKGKGKQVCRMVREGASGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...TGCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGGGTGCGTGCCACCTCTaGTCTTACCCCGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: SLKTSTAAGICSLPASSLGACHL*SYPGVK
Trigger: CTTTACACCGGGGTAAGACCAGAGGTGGCACGCACC...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCATCACTGCCCGATCAGTaGGCTCTGGAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPSLPDQ*ALEGWA
Trigger: AGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGA...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCTGTTGGAGATGCCCCTaGGCTCCTCCCTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LMSEGEGETGVSHGERGSCWRCP*APPWEA
Trigger: AGCTTCCCAGGGAGGAGCCCAGGGGCATCTCCAACA...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR TCA 90 bp CCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCTGTCTTCGAACCTTTaGGTTCTTATTCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PWASPDCHTQEAGLGLLLLSSNL*VLILSS
Trigger: GGAAGACAGAATAAGAACTCAAAGGTTCGAAGACAG...CAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR GCA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LMSEGEGETGVSHGERGSQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR GCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGTATGTAGGGACTGTCTaGCTACTGGGTATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKYVGTV*LLGMKS
Trigger: GCTCTTCATACCCAGTAGGCAGACAGTCCCTACATA...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCTGGGCCAGCTTGGCTaGCAAAACATGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQLGQLG*QNMLSA
Trigger: AGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCCAG...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCATTACCCTGCACGGGATaGTCCCAGCCTAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LCQKGKGKQVCRMVREGALPCTG*SQPRRG
Trigger: TCCCCTCCTAGGCTGGGAGCATCCCGTGCAGGGTAA...TGCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000652443.1
CDS-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGGGTGCGTGCCACCTCTaGTCTTACCCCGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQGACHL*SYPGVK
Trigger: CTTTACACCGGGGTAAGACCAGAGGTGGCACGCACC...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGACCTCGACGGCTGCTaGAATTTGCTCACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPDLDGC*NLLTAG
Trigger: GCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTC...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGTTCCACCGAGTCAGATaGCGTGGCCTCCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQFHRVR*RGLQSM
Trigger: CATGGACTGGAGGCCACGCCATCTGACTCGGTGGAA...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCACTTGGGGACAGCAGTTaGTGGCTTGAAAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: ILRRRVLGSSCTGSWGLPLGDSS*WLEKIY
Trigger: GTAAATCTTTTCAAGCCACCAACTGCTGTCCCCAAG...TGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp TCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCTCGGGAGAAAGGAGTTaGCTTCTGCCTGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SPDCHTQEAGLGLLLHRLSGERS*LLPVSF
Trigger: GAAAGAAACAGGCAGAAGCCAACTCCTTTCTCCCGA...GAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR GCA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGGCAGAGCTAGGATCCTaGCGTCATCTCCAAACCATC +
Preference number: 4 (lower is better)
Translates to: SLKTSTAAGICSLPASSLAELGS*RHLQTI
Trigger: GATGGTTTGGAGATGACGGCAGGATCCTAGCTCTGC...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTCTGGGCCAGCTTGGCTaGCAAAACATGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPLGQLG*QNMLSA
Trigger: AGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCCAG...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACTCCTGCTCTATCACTaGCCGATCAGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPLLLYH*PISGLW
Trigger: CCAGAGCCCACTGATCGGGCAGTGATAGAGCAGGAG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCCCAAGGCCTCCTCCTaGTCTGGGCTGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHPKASS*SGLLSP
Trigger: GGGAGAGAGCAGCCCAGAGCAGGAGGAGGCCTTGGG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTGAAGACCTCGACGGCTaGTGGAATTTGCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAEDLDG*WNLLTA
Trigger: GGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTC...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGVWAEE*GFPAAM
Trigger: CATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGAC...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGCCAATTCTTTCTTACTaGGACTTCGTAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKPILSY*DFVSVW
Trigger: CCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGG...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGTTCTACCTCTTTCCCTaGCTCTGTGCCAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKFYLFP*LCAKFS
Trigger: ACTGAATTTGGCACAGAGCCAGGGAAAGAGGTAGAA...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTCCGCTCTGGGGCACTaGTCATTGGGTGTTACGCTT +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAASALGH*SLGVTL
Trigger: AAGCGTAACACCCAATGACCAGTGCCCCAGAGCGGA...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCCTGCTGGAGGTACTTaGCTACTATGGCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQPAGGT*LLWPYG
Trigger: CCCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGG...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTCCTGCTGGAGGTACTTaGCTACTATGGCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAPAGGT*LLWPYG
Trigger: CCCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGG...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGGATTCTCTAACCTGCTaGAGGTACTTGGCTACTATG +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKDSLTC*RYLATM
Trigger: CATAGTAGCCAAGTACCTCCAGCAGGTTAGAGAATC...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGTCTCCTTGGCCGCAGTaGTCGCTTTTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQSPWPQ*SLLFCQ
Trigger: CTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGA...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCAGGAAAGGCTGAGTGTTaGAGATGCCCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCQKGKGKQVCRMVREGAGKAEC*RCPWAP
Trigger: AGGAGCCCAGGGGCATCTCCAACACTCAGCCTTTCC...TGCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTGGAAAGGCTGAGTGTTaGAGATGCCCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPGKAEC*RCPWAP
Trigger: AGGAGCCCAGGGGCATCTCCAACACTCAGCCTTTCC...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAAACTCCTGCGGAGAGGTaGGGGAGGATCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CSRGHRYHQMRQCQARRETPAER*GRICQQ
Trigger: CTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGT...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGGAGTCAACTTCTTGTTaGGTCCTTTCTACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKESTSC*VLSTSF
Trigger: GAAAGAGGTAGAAAGGACTCAACAAGAAGTTGACTC...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGCTCCTAGTGGCCGACTaGCTGTCCTGGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: FIPARVWSFSRSRMANCSLLVAD*LSWTPP
Trigger: AGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAG...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTGCCCATGCCACACTATaGGACACTTTCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPAHATL*DTFPEV
Trigger: GACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGC...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCAGCATCTGCCTCTGGTaGGGCCTTAGGAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LMSEGEGETGVSHGERGSSICLW*GLRKLS
Trigger: TGAAAGCTTCCTAAGGCCTCACCAGAGGCAGATGCT...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR GCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCGTTCTGATTGGTGCGTaGCACCTCTGGTCTTACCCC +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGVLIGA*HLWSYP
Trigger: GGGGTAAGACCAGAGGTGGCACGCACCAATCAGAAC...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTGTCGAGCTTGGACTCTaGTGCCCACTTGGCCAATTT +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAVELGL*CPLGQF
Trigger: AAATTGGCCAAGTGGGCAGCAGAGTCCAAGCTCGAC...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGACGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HLCQKGKGKQVCRMVREGRTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...TCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTTCACTGCCCGATCAGTaGGCTCTGGAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGSLPDQ*ALEGWA
Trigger: AGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGA...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTCACTGCCCGATCAGTaGGCTCTGGAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHSLPDQ*ALEGWA
Trigger: AGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCACTGCCCGATCAGTaGGCTCTGGAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSSLPDQ*ALEGWA
Trigger: AGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGA...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCATTTGGGTCGAGCTTaGACTCTGCTGCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPHLGRA*TLLPTW
Trigger: CCAAGTGGGCAGCAGAGTCCAAGCTCGACCCAAATG...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGCCGGCTTCCTCACTaGAATGTCGTAAGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPCRLPH*NVVSSH
Trigger: GTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGTGGGCTGTACGTGCTTaGGGAAGCAGCATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQWAVRA*GSSMLF
Trigger: GAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCA...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATACTCCTGCGGAGAGGTaGGGGAGGATCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHTPAER*GRICQQ
Trigger: CTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651385.1
CDS-3UTR TCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCCTTCCTCCTCCTCTTaGTTAGTTCCCGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQPSSSS*LVPALC
Trigger: ACATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGG...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTCTCCATGATGTTCTaGTTGGTGCGTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAFSMMF*LVRATS
Trigger: AGAGGTGGCACGCACCAATCAGAACATCATGGAGAA...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTCTCCTAGTGGCCGACTaGCTGTCCTGGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSLLVAD*LSWTPP
Trigger: AGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAG...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp ACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACTCCGGAGGGAAAGGCTaGGTGTTGGAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TQSYREPCEFSTWDFNSDSGGKG*VLEMPL
Trigger: CAGGGGCATCTCCAACACTCAGCCTTTCCCTCCGGA...GTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTCAGCAGTTGGTGGCTTaGAAAGATTTACCCTGCACG +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAQQLVA*KDLPCT
Trigger: CGTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTG...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAACTCCCAACCTCAGGTaGTTTACCCGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSLMSEGEGETGVSHGERTPNLR*FTRLGL
Trigger: AAGGCCGAGGCGGGTAAATCACCTGAGGTTGGGAGT...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR GCA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR GCA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGGCGTACTCCTCCGTGTaGTCTTCTAACAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: SLKTSTAAGICSLPASSLAYSSV*SSNSSL
Trigger: AAGTGAACTGTTAGAAGAGCACACGGAGGAGTACGC...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACTTACCCTGCACGGGATaGTCCCAGCCTAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHLPCTG*SQPRRG
Trigger: TCCCCTCCTAGGCTGGGAGCATCCCGTGCAGGGTAA...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp GTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGGCCTCTCTTTGGCTCACTGTTCTaGAGACTGTGCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: VPGLPRLFLTTSSLRGPLFGSLF*RLCNKH
Trigger: ATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAA...GAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGCGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPRTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GGTCTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GLTQSYREPCEFSTWDFNSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...GTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGGACTTCGTAAGCGTCTaGGCCGAGGAGTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPDFVSV*AEEWGF
Trigger: AAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTC...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTATAACTGGGCCAGCTTaGCTGCCAAAACATGCTCTC +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAITGPA*LPKHAL
Trigger: GAGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTAT...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGTACTGGTCATATAACTaGGCCAGCTTGGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SLKTSTAAGICSLPASSLYWSYN*ASLAAK
Trigger: TTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTA...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCGAGACCTCCGCTCTaGGGCACTGGTCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSSRPPL*GTGHWV
Trigger: CACCCAATGACCAGTGCCCCAGAGCGGAGGTCTCGA...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCTTCTGCTAGCAAGGTaGGACTACTGTGTCCGACAG +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPLLLAR*DYCVRQ
Trigger: CTGTCGGACACAGTAGTCCCACCTTGCTAGCAGAAG...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACTTCTGCTAGCAAGGTaGGACTACTGTGTCCGACAG +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPLLLAR*DYCVRQ
Trigger: CTGTCGGACACAGTAGTCCCACCTTGCTAGCAGAAG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACCCCTGGGCTCCTCCCTaGGAAGCTGCAGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHPWAPP*EAAAMS
Trigger: AGACATGGCTGCAGCTTCCCAGGGAGGAGCCCAGGG...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCTGTTGGAGATGCCCCTaGGCTCCTCCCTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFCWRCP*APPWEA
Trigger: AGCTTCCCAGGGAGGAGCCCAGGGGCATCTCCAACA...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp AGTCACCGTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGGGGATTCATTTTGGCTaGGATGGGTCCCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: SHRAWPAQALFNNQLSPWGIHFG*DGSLKK
Trigger: TTTCTTAAGGGACCCATCCCAGCCAAAATGAATCCC...CCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCACGGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp ACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGAAAAGAGGTTTATTTTaGCTCACTGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: TVILRRRVLGSSCTGSWGKRGLF*LTVLQT
Trigger: AGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTT...CCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR TCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTCAGCATGCTTTTCACTaGACATCCTTGAAGACCTCG +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAQHAFH*TSLKTS
Trigger: CGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTG...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGACAGCAGTTGGTGGCTTaGAAAGATTTACCCTGCACG +
Preference number: 4 (lower is better)
Translates to: HLCQKGKGKQVCRMVREGQQLVA*KDLPCT
Trigger: CGTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTG...TCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000652443.1
CDS-3UTR TCA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTAGGTGTGTCGCATGGTaGGAGAGGGAGCAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGRCVAW*EREQER
Trigger: TCTCTCTTGCTCCCTCTCTCACCATGCGACACACCT...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR TCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCAAAGAAAAGCTGTACTaGGACAGCCCCAACCCACCA +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGKEKLY*DSPNPP
Trigger: TGGTGGGTTGGGGCTGTCTCAGTACAGCTTTTCTTT...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGGGCTGCAGCAAGCTGTaGTGGCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: YHQMRQCQARRESRTHIEGCSKL*WHHCTP
Trigger: TGGAGTGCAGTGGTGCCATCACAGCTTGCTGCAGCC...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTGCAGCCGATCATGGATaGTTTCATAATCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAAADHG*FHNLQV
Trigger: GACCTGCAGATTATGAAAGCATCCATGATCGGCTGC...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGTCTGCCTTAATGCTCTaGTCCTGTGTTAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQSALML*SCVSTG
Trigger: GCCAGTACTAACACAGGAGCAGAGCATTAAGGCAGA...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTGGGCCAGCTTGGCTaGCAAAACATGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLGQLG*QNMLSA
Trigger: AGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCCAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACCTCCTGCTCTATCACTaGCCGATCAGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHLLLYH*PISGLW
Trigger: CCAGAGCCCACTGATCGGGCAGTGATAGAGCAGGAG...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTGCAACCGAGATAAGCTaGATCAAAGGGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAATEIS*IKGALL
Trigger: CAACAATGCCCCTTTGATGCAGCTTATCTCGGTTGC...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTCTGGAATTTGCTCACTaGCGGCTTCCTCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPLEFAH*RLPHWN
Trigger: ATTCCAGTGAGGAAGCCGGCAGTGAGCAAATTCCAG...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: YHQMRQCQARRESRTHIERWGRI*QQAREK
Trigger: TTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCT...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTVWAEE*GFPAAM
Trigger: CATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGAC...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHVWAEE*GFPAAM
Trigger: CATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGAC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACGGTGCGTGCCACCTCTaGTCTTACCCCGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHGACHL*SYPGVK
Trigger: CTTTACACCGGGGTAAGACCAGAGGTGGCACGCACC...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGTACTGGTCATATAACTaGGCCAGCTTGGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQYWSYN*ASLAAK
Trigger: TTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTA...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTCCGCTCTGGGGCACTaGTCATTGGGTGTTACGCTT +
Preference number: 4 (lower is better)
Translates to: FIPARVWSFSRSRMANCSSALGH*SLGVTL
Trigger: AAGCGTAACACCCAATGACCAGTGCCCCAGAGCGGA...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGGTCATCAGAGTCAGCTaGTTACTGCCATCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQVIRVS*LLPSAS
Trigger: TGAAGCTGATGGCAGTAACCAGCTGACTCTGATGAC...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAACCGACCTTTTCTCCTTaGCCGCAGTGGTCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CSRGHRYHQMRQCQARREPTFSP*PQWSLL
Trigger: CAAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGG...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCGACCTCGACGGCTGCTaGAATTTGCTCACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFDLDGC*NLLTAG
Trigger: GCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTC...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTATTCCAGCTAGGGTTTaGTCCTTCAGCCGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPIPARV*SFSRSR
Trigger: ACGACTACGGCTGAAGGACCAAACCCTAGCTGGAAT...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTTTCCACCGAGTCAGATaGCGTGGCCTCCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGFHRVR*RGLQSM
Trigger: CATGGACTGGAGGCCACGCCATCTGACTCGGTGGAA...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGGGAAAGGCTGAGTGTTaGAGATGCCCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWGKAEC*RCPWAP
Trigger: AGGAGCCCAGGGGCATCTCCAACACTCAGCCTTTCC...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGTTCTCCATGATGTTCTaGTTGGTGCGTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPFSMMF*LVRATS
Trigger: AGAGGTGGCACGCACCAATCAGAACATCATGGAGAA...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCAATCTGTTCTCCATaGTGTTCTGATTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPAICSP*CSDWCV
Trigger: CACGCACCAATCAGAACATCATGGAGAACAGATTGC...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCATTGAAGGAAATGGCTTaGTGGGGTTTGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPLKEMA*WGLAEL
Trigger: TAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAA...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGACATTAAGGAGCTCCTaGGGAGGGTTTAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQTLRSS*GGFKGL
Trigger: CAAACCTTTAAACCCTCCTCAGGAGCTCCTTAATGT...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCACAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCATGCTTTGGACCTCGCTaGTTGCAATTTCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPCFGPR*LQFLPH
Trigger: ATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCA...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPLSSSL*RWFFFF
Trigger: GAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAATCTGCAGGTCTGACTaGTACAAAATCGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPICRSD*YKIVSH
Trigger: GTGGCTGACGATTTTGTAGCAGTCAGACCTGCAGAT...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGTTCTGATTGGTGCGTaGCACCTCTGGTCTTACCCC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHVLIGA*HLWSYP
Trigger: GGGGTAAGACCAGAGGTGGCACGCACCAATCAGAAC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACAGTGTTTCAAGCTCTaGCTTAATGCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPQCFKL*LNALLL
Trigger: CAGGAGCAGAGCATTAAGGCAGAGCTTGAAACACTG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTTGGCTGCCAAAACATaGTCTCGGCTAAAACAGGGA +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPLAAKT*SRLKQG
Trigger: TCCCTGTTTTAGCCGAGAGCATGTTTTGGCAGCCAA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTCGGGATACGGCTCTaGAATCTCATCACCGGGATG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLGIRL*NLITGM
Trigger: CATCCCGGTGATGAGATTGCAGAGCCGTATCCCGAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTCTCGGGATACGGCTCTaGAATCTCATCACCGGGATG +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTLGIRL*NLITGM
Trigger: CATCCCGGTGATGAGATTGCAGAGCCGTATCCCGAG...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTCTCGGGATACGGCTCTaGAATCTCATCACCGGGATG +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSLGIRL*NLITGM
Trigger: CATCCCGGTGATGAGATTGCAGAGCCGTATCCCGAG...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTACTGATTCTCTAACCTaGTGGAGGTACTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAATDSLT*WRYLAT
Trigger: AGTAGCCAAGTACCTCCAGCAGGTTAGAGAATCAGT...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGTGTTCCATCAATCCTTaGTTGGAAATATATTGTGCT +
Preference number: 4 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKCSINP*LEIYCA
Trigger: AGCACAATATATTTCCAAGCAAGGATTGATGGAACA...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGGCCTCTCTTACAAAAGGCACTTTaGAGATTCTGCATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: VPGLPRLFLTTSSLRGPLLQKAL*RFCILG
Trigger: TCCTAGAATGCAGAATCTGCAAAGTGCCTTTTGTAA...GAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCCGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLRTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHRTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAGAAGAAAAGGCGTGTGTATCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: EQVIPNVHCTGEEEKACVSGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...TACACACGCCTTTTCTTCTTCCCCAGTACAATGAACATTAGGAATTACCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp GGTCTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACGACTTCGTAAGCGTCTaGGCCGAGGAGTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: GLTQSYREPCEFSTWDFNDFVSV*AEEWGF
Trigger: AAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTC...GTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACGACTTCGTAAGCGTCTaGGCCGAGGAGTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHDFVSV*AEEWGF
Trigger: AAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTC...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTTGTCTTGCAAGGTACTaGTCATATAACTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPCLARY*SYNWAS
Trigger: GCTGGCCCAGTTATATGACCAGTACCTTGCAAGACA...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTWGTGH*VLRFLP
Trigger: TGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCA...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTCGAGACCTCCGCTCTaGGGCACTGGTCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLSRPPL*GTGHWV
Trigger: CACCCAATGACCAGTGCCCCAGAGCGGAGGTCTCGA...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTGTCATCAGAGTCAGCTaGTTACTGCCATCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPVIRVS*LLPSAS
Trigger: TGAAGCTGATGGCAGTAACCAGCTGACTCTGATGAC...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCGGTACTTGGCTACTATaGCCCTATGGGTGTCTATGT +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGGTWLL*PYGCLC
Trigger: ACATAGACACCCATAGGGCCATAGTAGCCAAGTACC...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTGGTACTTGGCTACTATaGCCCTATGGGTGTCTATGT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPGTWLL*PYGCLC
Trigger: ACATAGACACCCATAGGGCCATAGTAGCCAAGTACC...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGCCTGCTGGAGGTACTTaGCTACTATGGCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: QRSQIPPNETVSGKKGIKPAGGT*LLWPYG
Trigger: CCCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGG...CTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTCCGACCTTTTCTCCTTaGCCGCAGTGGTCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTPTFSP*PQWSLL
Trigger: CAAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGG...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTGACCTCGACGGCTGCTaGAATTTGCTCACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCDLDGC*NLLTAG
Trigger: GCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTC...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTTCTCCAGGAACCAGCTaGGGCTCAATGGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPSPGTS*GSMVIK
Trigger: CTTTATTACCATTGAGCCCCAGCTGGTTCCTGGAGA...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCTTGGGGACAGCAGTTaGTGGCTTGAAAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQLGDSS*WLEKIY
Trigger: GTAAATCTTTTCAAGCCACCAACTGCTGTCCCCAAG...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCCTTGGGGACAGCAGTTaGTGGCTTGAAAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: LMSEGEGETGVSHGERGSLGDSS*WLEKIY
Trigger: GTAAATCTTTTCAAGCCACCAACTGCTGTCCCCAAG...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000652443.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCCATGGCTGGGGCACTaGTCATTGGGTGTTACGCTT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHPWLGH*SLGVTL
Trigger: AAGCGTAACACCCAATGACCAGTGCCCCAGCCATGG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGCACCTGTCCCTCAGGTaGCAGTGGACAGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: YHQMRQCQARRESRTHIEHLSLR*QWTEAA
Trigger: AGCTGCTTCTGTCCACTGCCACCTGAGGGACAGGTG...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTCTGTCTTCGAACCTTTaGGTTCTTATTCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAALSSNL*VLILSS
Trigger: GGAAGACAGAATAAGAACTCAAAGGTTCGAAGACAG...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR TCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTCATAATCTGCAGGTCTaGCTGCTACAAAATCGTCAG +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPHNLQV*LLQNRQ
Trigger: CTGACGATTTTGTAGCAGTCAGACCTGCAGATTATG...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCCATAATCTGCAGGTCTaGCTGCTACAAAATCGTCAG +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGHNLQV*LLQNRQ
Trigger: CTGACGATTTTGTAGCAGTCAGACCTGCAGATTATG...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTTCTGCCTACTGGGTATaGAGAGCATTTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPSAYWV*RAFLFP
Trigger: TGGAAAGAGAAATGCTCTTCATACCCAGTAGGCAGA...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGCCATCAGCTTCAAATaGGAAGGGCACTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: QRSQIPPNETVSGKKGIKAISFK*EGHSTS
Trigger: GGAAGTGGAGTGCCCTTCTCATTTGAAGCTGATGGC...CTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTGCCATCAGCTTCAAATaGGAAGGGCACTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSAISFK*EGHSTS
Trigger: GGAAGTGGAGTGCCCTTCTCATTTGAAGCTGATGGC...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTTTGTTCTGCCAGCTTaGAAAGGCTTAGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPFVLPA*KGLGPK
Trigger: TTTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCTTCACTGAACATCCTTaGAGACCTCGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLFTEHP*RPRRLL
Trigger: CAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAA...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAACACAACATCTTTCACTaGCTGCAGACTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: CSRGHRYHQMRQCQARREHNIFH*LQTGCA
Trigger: AGCACAGCCAGTCTGCAGTCAGTGAAAGATGTTGTG...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp GAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAGAAGAAAAGGCGTGTGTATCCGGAGGGAAAGGCTaGGTGTTGGAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: EQVIPNVHCTGEEEKACVSGGKG*VLEMPL
Trigger: CAGGGGCATCTCCAACACTCAGCCTTTCCCTCCGGA...TACACACGCCTTTTCTTCTTCCCCAGTACAATGAACATTAGGAATTACCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR GCA 90 bp TCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGGATTTTTCGGACACCATTCTGTCTTCCCATGTCTaGATCCTCATCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: SSCTGSWGLPRWDFSDTILSSHV*ILIIFN
Trigger: ATTGAAAATGATGAGGATGCAGACATGGGAAGACAG...AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR GCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPAISPS*VPSWKI
Trigger: AATTTTCCATGAGGGGACGCATGAGGGAGAAATTGC...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTTGGACCTCGCTGCTTaGAATTTCTCCCTCATGCGT +
Preference number: 4 (lower is better)
Translates to: PRATGSHVNSVLGISTQTLDLAA*NFSLMR
Trigger: ACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAA...CGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FIPARVWSFSRSRMANCSGVGIS*SNALSA
Trigger: AGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCC...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAACTTCTTTCGGGGTCCTaGATCAGCAATCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CSRGHRYHQMRQCQARRELLSGS*ISNLFS
Trigger: GGAGAACAGATTGCTGATGCAGGACCCCGAAAGAAG...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCCCAAGGCCTCCTCCTaGTCTGGGCTGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGPKASS*SGLLSP
Trigger: GGGAGAGAGCAGCCCAGAGCAGGAGGAGGCCTTGGG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTTCTCCAATGGCCCATaGCACACTATGAGACACTTT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPFSNGP*HTMRHF
Trigger: AAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTGTCGAGCTTGGACTCTaGTGCCCACTTGGCCAATTT +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGVELGL*CPLGQF
Trigger: AAATTGGCCAAGTGGGCAGCAGAGTCCAAGCTCGAC...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCTTGGGGAAGCAGCATaGTTTTCACTGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPLGEAA*FSLNIL
Trigger: AAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAG...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCCTTGGGGAAGCAGCATaGTTTTCACTGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGLGEAA*FSLNIL
Trigger: AAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAG...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGGGGTTGGGCTGTACGTaGTTGGGGAAGCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLGLGCT*LGKQHA
Trigger: AGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCC...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCATGGTGAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EKRFILAHCSADCAISMVRWGRI*QQAREK
Trigger: TTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCT...CACCATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000652443.1
CDS-3UTR GCA 90 bp TTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCAAAAGGAGTTGGCTTCTaGCTGTTTCTTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCQKGKGKQVCRMVREGAKGVGF*LFLSWL
Trigger: CAGCCAAGAAAGAAACAGGCAGAAGCCAACTCCTTT...TGCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CCA 90 bp GCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTGGGGACAGCAGTTGGTaGCTGTTTCTTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ATGSHVNSVLGISTQTWSGDSSW*LFLSWL
Trigger: CAGCCAAGAAAGAAACAGCCACCAACTGCTGTCCCC...ACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCACGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSRTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTTGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp GAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCATGGTGTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: EKRFILAHCSADCAISMVSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...CACCATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFISGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGTCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: INRFNQGSSYHIVGSNPESGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTCAGGAGGCGGGTCTTaGGCTCCTCCTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTSGGGS*APPAQA
Trigger: AGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGA...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQVWAEE*GFPAAM
Trigger: CATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGAC...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCTTCTACCTCTTTCCCTaGCTCTGTGCCAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGFYLFP*LCAKFS
Trigger: ACTGAATTTGGCACAGAGCCAGGGAAAGAGGTAGAA...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCAGAAGGGAAGCCAGGTaGAACCTGGGGTTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFRREAR*NLGFRL
Trigger: AAGCCTAAACCCCAGGTTCCACCTGGCTTCCCTTCT...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGTACTGGTCATATAACTaGGCCAGCTTGGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPYWSYN*ASLAAK
Trigger: TTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTA...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCCTTCTGCTAGCAAGGTaGGACTACTGTGTCCGACAG +
Preference number: 4 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFLLLAR*DYCVRQ
Trigger: CTGTCGGACACAGTAGTCCCACCTTGCTAGCAGAAG...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTCTCCTTGGCCGCAGTaGTCGCTTTTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFSPWPQ*SLLFCQ
Trigger: CTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGCCGACCTTTTCTCCTTaGCCGCAGTGGTCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLPTFSP*PQWSLL
Trigger: CAAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGG...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTGCCGGCTTCCTCACTaGAATGTCGTAAGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLCRLPH*NVVSSH
Trigger: GTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGTGGGCTGTACGTGCTTaGGGAAGCAGCATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QRSQIPPNETVSGKKGIKWAVRA*GSSMLF
Trigger: GAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCA...CTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTTGGGCTGTACGTGCTTaGGGAAGCAGCATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTWAVRA*GSSMLF
Trigger: GAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCA...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CCTCTAGTTTCCAACAGTTACTTATTTCCCAACTTTGCCATAGGGAAAACAGTCCCCTGGGCTCCTCCCTaGGAAGCTGCAGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: PLVSNSYLFPNFAIGKTVPWAPP*EAAAMS
Trigger: AGACATGGCTGCAGCTTCCCAGGGAGGAGCCCAGGG...GACTGTTTTCCCTATGGCAAAGTTGGGAAATAAGTAACTGTTGGAAACTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp GCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTTCATTCTCCTGGTGGTaGCAGGTTTCTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ATGSHVNSVLGISTQTWSSFSWW*QVSPQP
Trigger: TGGCTGAGGAGAAACCTGCCACCACCAGGAGAATGA...ACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGGGAGTGTCATTCTCCTaGTGGTGGCAGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWGVSFS*WWQVSP
Trigger: AGGAGAAACCTGCCACCACCAGGAGAATGACACTCC...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
3UTR CAA 72 bp GTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTaGGGCTGTCACCTTCTTCCGACCTTTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VHQQLYVSIRQV*GCHLLPTFSPW
Trigger: CCAAGGAGAAAAGGTCGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGACTGTCTTCGAACCTTTaGGTTCTTATTCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLCQKGKGKQVCRMVREGLSSNL*VLILSS
Trigger: GGAAGACAGAATAAGAACTCAAAGGTTCGAAGACAG...TCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR TCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTATGGAACTTGACTCTTaGGTAACTTTGGGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPMELDS*VTLGVN
Trigger: GTTGACTCCCAAAGTTACTCAAGAGTCAAGTTCCAT...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTCCTTCCTCCTCCTCTTaGTTAGTTCCCGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTPSSSS*LVPALC
Trigger: ACATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGG...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGTCTGCCTACTGGGTATaGAGAGCATTTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPSAYWV*RAFLFP
Trigger: TGGAAAGAGAAATGCTCTTCATACCCAGTAGGCAGA...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTTCTCCATGATGTTCTaGTTGGTGCGTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHFSMMF*LVRATS
Trigger: AGAGGTGGCACGCACCAATCAGAACATCATGGAGAA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAGGAAATGGCTTaGTGGGGTTTGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: FIPARVWSFSRSRMANCSLKEMA*WGLAEL
Trigger: TAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAA...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGGCCATCAGCTTCAAATaGGAAGGGCACTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLAISFK*EGHSTS
Trigger: GGAAGTGGAGTGCCCTTCTCATTTGAAGCTGATGGC...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTCACAACATCTTTCACTaGCTGCAGACTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTHNIFH*LQTGCA
Trigger: AGCACAGCCAGTCTGCAGTCAGTGAAAGATGTTGTG...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTCCGGAGGGAAAGGCTaGGTGTTGGAGATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSSGGKG*VLEMPL
Trigger: CAGGGGCATCTCCAACACTCAGCCTTTCCCTCCGGA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR TCA 90 bp GAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAGAAGAAAAGGCGTGTGTAACTCCCAACCTCAGGTaGTTTACCCGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: EQVIPNVHCTGEEEKACVTPNLR*FTRLGL
Trigger: AAGGCCGAGGCGGGTAAATCACCTGAGGTTGGGAGT...TACACACGCCTTTTCTTCTTCCCCAGTACAATGAACATTAGGAATTACCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCACTTGGAGACCTTGTaGGAACAGTTTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHHLETL*EQFSRP
Trigger: GGGCCTAGAAAACTGTTCTCACAAGGTCTCCAAGTG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTTGGACCTCGCTGCTTaGAATTTCTCCCTCATGCGT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLDLAA*NFSLMR
Trigger: ACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTTTGGACCTCGCTGCTTaGAATTTCTCCCTCATGCGT +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGLDLAA*NFSLMR
Trigger: ACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAA...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCAGCAATGCACTTTCTaGTTTGGACCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHQQCTF*FGPRCL
Trigger: CAAGCAGCGAGGTCCAAAGCAGAAAGTGCATTGCTG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGGATTTCCTGCAGCAATaGACTTTCTGCTTTGGACCT +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPDFLQQ*TFCFGP
Trigger: AGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATC...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GGTCTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLTQSYREPCEFSTWDFNGVGIS*SNALSA
Trigger: AGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCC...GTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHGVGIS*SNALSA
Trigger: AGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTTCTTTCGGGGTCCTaGATCAGCAATCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLLSGS*ISNLFS
Trigger: GGAGAACAGATTGCTGATGCAGGACCCCGAAAGAAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTCTTCTTTCGGGGTCCTaGATCAGCAATCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGLLSGS*ISNLFS
Trigger: GGAGAACAGATTGCTGATGCAGGACCCCGAAAGAAG...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCTTCTTCCATCTTCTGTaGGTACTCCTCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLFFHLL*VLLRVL
Trigger: GAGCACACGGAGGAGTACGCACAGAAGATGGAAGAA...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTTCTTCTTGGCCCTTTaGACTTTCCTCCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHFFLAL*TFLQAF
Trigger: GAAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTACCGGGATGTTCTTCTaGTGCTTGTTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPTGMFF*CLFPFL
Trigger: AAGAAAAGGAAACAAGCAGCAGAAGAACATCCCGGT...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTACCGGGATGTTCTTCTaGTGCTTGTTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPTGMFF*CLFPFL
Trigger: AAGAAAAGGAAACAAGCAGCAGAAGAACATCCCGGT...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCCCCAAGGCCTCCTCCTaGTCTGGGCTGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFPKASS*SGLLSP
Trigger: GGGAGAGAGCAGCCCAGAGCAGGAGGAGGCCTTGGG...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACGAAATCCGATGTTCTaGTGTGACAATGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPRNPMF*CDNGGI
Trigger: AATTCCTCCATTGTCACAGCAGAACATCGGATTTCG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAAACTCCTGTTGCAGCTaGTCCAGTCTAAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPNSCCS*SSLKKS
Trigger: TGATTTCTTTAGACTGGAGCAGCTGCAACAGGAGTT...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCAACTCCTGTTGCAGCTaGTCCAGTCTAAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGNSCCS*SSLKKS
Trigger: TGATTTCTTTAGACTGGAGCAGCTGCAACAGGAGTT...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGGGAGCCATGGCACTTTGCAGATTCTaGATTCTAGGATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QGSSYHIVGSNPELQGAMALCRF*ILGWKW
Trigger: CCACTTCCATCCTAGAATGCAGAATCTGCAAAGTGC...CATGGCTCCCTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSRWGRI*QQAREK
Trigger: TTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651385.1
CDS-3UTR GCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTACAGGCATGAGCCACTaGCTGGCTGCCTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCTGMSH*LAAFRL
Trigger: AAGTCTGAAGGCAGCCAGGCAGTGGCTCATGCCTGT...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTTGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: ATGSHVNSVLGISTQTWSWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...ACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CCTCTAGTTTCCAACAGTTACTTATTTCCCAACTTTGCCATAGGGAAAACAGTCTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PLVSNSYLFPNFAIGKTVSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...GACTGTTTTCCCTATGGCAAAGTTGGGAAATAAGTAACTGTTGGAAACTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFISCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAAGAAGGGAAGCCAGGTaGAACCTGGGGTTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSRREAR*NLGFRL
Trigger: AAGCCTAAACCCCAGGTTCCACCTGGCTTCCCTTCT...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp GGTAAATTAGCTCTTCAGGCTGAACACTGGAAAGGCCAGGATATGGAAGGCTTCTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GKLALQAEHWKGQDMEGFSSLCR*FFFFPF
Trigger: GAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGA...GAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHSSLCR*FFFFPF
Trigger: GAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGCTGATGAGGTTTTTCTaGATCAAGGCCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPLMRFF*IKASLN
Trigger: GTTCAGACTGGCCTTGATCCAGAAAAACCTCATCAG...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCCGATCAGTGGGCTCTaGAGGGCTGGGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIPISGL*RAGLHK
Trigger: CTTGTGAAGCCCAGCCCTCCAGAGCCCACTGATCGG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTCACTGCCCGATCAGTaGGCTCTGGAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGSLPDQ*ALEGWA
Trigger: AGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCTCCCGTTTTCTCCAATaGCCCATGCCACACTATGAG +
Preference number: 4 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFSRFLQ*PMPHYE
Trigger: CTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGA...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCATTGTTGGGGTCATTTaGGTCGAGCTTGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLIVGVI*VELGLC
Trigger: GCAGAGTCCAAGCTCGACCCAAATGACCCCAACAAT...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTTCAAAGGGGCATTGTTaGGGTCATTTGGGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTSKGHC*GHLGRA
Trigger: AGCTCGACCCAAATGACCCCAACAATGCCCCTTTGA...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCTCAAAGGGGCATTGTTaGGGTCATTTGGGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLSKGHC*GHLGRA
Trigger: AGCTCGACCCAAATGACCCCAACAATGCCCCTTTGA...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTCTCCTTGGCCGCAGTaGTCGCTTTTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLSPWPQ*SLLFCQ
Trigger: CTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGA...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCCCTGGGCTCCTCCCTaGGAAGCTGCAGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGPWAPP*EAAAMS
Trigger: AGACATGGCTGCAGCTTCCCAGGGAGGAGCCCAGGG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTGTTGGAGATGCCCCTaGGCTCCTCCCTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFICWRCP*APPWEA
Trigger: AGCTTCCCAGGGAGGAGCCCAGGGGCATCTCCAACA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGATTCTGCATTCTAGGATaGAAGTGGAGAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: LSLMSEGEGETGVSHGERFCILG*KWRETV
Trigger: CACCGTCTCTCTCCACTTCCATCCTAGAATGCAGAA...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR CCA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGCTGCAGCCATGTCTTaGAGCAAAAACACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LSLMSEGEGETGVSHGERAAAMS*SKNTSL
Trigger: TAAGCTGGTGTTTTTGCTCCAAGACATGGCTGCAGC...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCCCTGGGATTCATTTTaGCTGGGATGGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHPWDSF*LGWVLV
Trigger: AACAAGGACCCATCCCAGCCAAAATGAATCCCAGGG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp AAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTAATAACCAGCTCTCTCCGTaGGCCTCTCCGGACTGTCAT +
Preference number: 4 (lower is better)
Translates to: KQCLKGGHFPYNEQVIPNNQLSP*ASPDCH
Trigger: ATGACAGTCCGGAGAGGCCCACGGAGAGAGCTGGTT...ATTAGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp GAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCATGGTGGTGAGTCACCGTGCCTaGCCTGCCCAGGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: EKRFILAHCSADCAISMVVSHRA*PAQALF
Trigger: AAAAAGAGCCTGGGCAGGCCAGGCACGGTGACTCAC...CACCATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR TCA 90 bp CAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGGGAGCCATGCTGTCTTCGAACCTTTaGGTTCTTATTCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGSSYHIVGSNPELQGAMLSSNL*VLILSS
Trigger: GGAAGACAGAATAAGAACTCAAAGGTTCGAAGACAG...CATGGCTCCCTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGGAGTCAACTTCTTGTTaGGTCCTTTCTACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPESTSC*VLSTSF
Trigger: GAAAGAGGTAGAAAGGACTCAACAAGAAGTTGACTC...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCACCTTCCTCCTCCTCTTaGTTAGTTCCCGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSPSSSS*LVPALC
Trigger: ACATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGG...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGCAATCTGTTCTCCATaGTGTTCTGATTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHAICSP*CSDWCV
Trigger: CACGCACCAATCAGAACATCATGGAGAACAGATTGC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTTGAAGGAAATGGCTTaGTGGGGTTTGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLKEMA*WGLAEL
Trigger: TAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCTTGAAGGAAATGGCTTaGTGGGGTTTGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLLKEMA*WGLAEL
Trigger: TAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAA...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCGAGGGTCTCCAGATCTaGTCACATGCTGACTACTGT +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFEGLQI*SHADYC
Trigger: ACAGTAGTCAGCATGTGATCAGATCTGGAGACCCTC...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGATGAGACACTTTCCCTaGGGTCATCAGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLMRHFP*GHQSQL
Trigger: CAGCTGACTCTGATGACCTCAGGGAAAGTGTCTCAT...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCTCTTGGCTTCTAAGATaGAGAAGCCTAAATCGTTTG +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGSWLLR*RSLNRL
Trigger: CAAACGATTTAGGCTTCTTCATCTTAGAAGCCAAGA...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGGAAACGATTTATCACTaGTTCTCTAACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPETIYH*FSNLLE
Trigger: CTCCAGCAGGTTAGAGAATCAGTGATAAATCGTTTC...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTCAGCATGCTTTTCACTaGACATCCTTGAAGACCTCG +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGQHAFH*TSLKTS
Trigger: CGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTG...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGGCAAACTGTTCGTTaGAAAGAGACTTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPWQTVR*KETSTK
Trigger: CTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GGTAAATTAGCTCTTCAGGCTGAACACTGGAAAGGCCAGGATATGGAAGGCTTCAACAGAGGCAAGAAGTaGCGCAGAGTAGAGGTACAA +
Preference number: 4 (lower is better)
Translates to: GKLALQAEHWKGQDMEGFNRGKK*RRVEVQ
Trigger: TTGTACCTCTACTCTGCGTCACTTCTTGCCTCTGTT...GAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp AAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTAATAGGTGTGTCGCATGGTaGGAGAGGGAGCAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KQCLKGGHFPYNEQVIPNRCVAW*EREQER
Trigger: TCTCTCTTGCTCCCTCTCTCACCATGCGACACACCT...ATTAGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR TCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTGTCTTTCTGGTAAAATaGAATGGGCCAAAAGATAAG +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAVFLVK*NGPKDK
Trigger: CTTATCTTTTGGCCCATTTCATTTTACCAGAAAGAC...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTTGGACCTCGCTGCTTaGAATTTCTCCCTCATGCGT +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFLDLAA*NFSLMR
Trigger: ACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp ACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACTGCTTTGGACCTCGCTaGTTGCAATTTCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TQSYREPCEFSTWDFNSDCFGPR*LQFLPH
Trigger: ATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCA...GTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTGCTTTGGACCTCGCTaGTTGCAATTTCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHCFGPR*LQFLPH
Trigger: ATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCACAGCAATGCACTTTCTaGTTTGGACCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSQQCTF*FGPRCL
Trigger: CAAGCAGCGAGGTCCAAAGCAGAAAGTGCATTGCTG...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGGATTTCCTGCAGCAATaGACTTTCTGCTTTGGACCT +
Preference number: 4 (lower is better)
Translates to: PRATGSHVNSVLGISTQTDFLQQ*TFCFGP
Trigger: AGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATC...CGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLGVGIS*SNALSA
Trigger: AGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCC...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWLSSSL*RWFFFF
Trigger: GAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAG...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCATCTGCAGGTCTGACTaGTACAAAATCGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLICRSD*YKIVSH
Trigger: GTGGCTGACGATTTTGTAGCAGTCAGACCTGCAGAT...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GGTAAATTAGCTCTTCAGGCTGAACACTGGAAAGGCCAGGATATGGAAGGCTTCGCAGCCGATCATGGATaGTTTCATAATCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GKLALQAEHWKGQDMEGFAADHG*FHNLQV
Trigger: GACCTGCAGATTATGAAAGCATCCATGATCGGCTGC...GAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGCAGCCGATCATGGATaGTTTCATAATCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHAADHG*FHNLQV
Trigger: GACCTGCAGATTATGAAAGCATCCATGATCGGCTGC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTGCAGAGCTAGGATCCTaGCGTCATCTCCAAACCATC +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCAELGS*RHLQTI
Trigger: GATGGTTTGGAGATGACGGCAGGATCCTAGCTCTGC...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTCTGCCTTAATGCTCTaGTCCTGTGTTAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHSALML*SCVSTG
Trigger: GCCAGTACTAACACAGGAGCAGAGCATTAAGGCAGA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCCAGTGTTTCAAGCTCTaGCTTAATGCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLQCFKL*LNALLL
Trigger: CAGGAGCAGAGCATTAAGGCAGAGCTTGAAACACTG...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTTTGGCTGCCAAAACATaGTCTCGGCTAAAACAGGGA +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGLAAKT*SRLKQG
Trigger: TCCCTGTTTTAGCCGAGAGCATGTTTTGGCAGCCAA...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCTGGGCCAGCTTGGCTaGCAAAACATGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILGQLG*QNMLSA
Trigger: AGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCCAG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTATATGCTTCTTCATCTaGTTTCTGGTCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAICFFI*FLVSFF
Trigger: GAAAAAGCTGACCAGAAAGCAGATGAAGAAGCATAT...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGCGTACTCCTCCGTGTaGTCTTCTAACAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHAYSSV*SSNSSL
Trigger: AAGTGAACTGTTAGAAGAGCACACGGAGGAGTACGC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTGCGTACTCCTCCGTGTaGTCTTCTAACAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGAYSSV*SSNSSL
Trigger: AAGTGAACTGTTAGAAGAGCACACGGAGGAGTACGC...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACGCGTACTCCTCCGTGTaGTCTTCTAACAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHAYSSV*SSNSSL
Trigger: AAGTGAACTGTTAGAAGAGCACACGGAGGAGTACGC...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTTCTTCCATCTTCTGTaGGTACTCCTCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLFFHLL*VLLRVL
Trigger: GAGCACACGGAGGAGTACGCACAGAAGATGGAAGAA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTTCTTCCATCTTCTGTaGGTACTCCTCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFFFHLL*VLLRVL
Trigger: GAGCACACGGAGGAGTACGCACAGAAGATGGAAGAA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTTCTTCTTGGCCCTTTaGACTTTCCTCCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLFFLAL*TFLQAF
Trigger: GAAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCTCCTGCTCTATCACTaGCCGATCAGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLLLYH*PISGLW
Trigger: CCAGAGCCCACTGATCGGGCAGTGATAGAGCAGGAG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCTCCTGCTCTATCACTaGCCGATCAGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILLLYH*PISGLW
Trigger: CCAGAGCCCACTGATCGGGCAGTGATAGAGCAGGAG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAAGAGTCAGCTGGTTACTaGCATCAGCTTCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: CSRGHRYHQMRQCQARREESAGY*HQLQMR
Trigger: TCTCATTTGAAGCTGATGGCAGTAACCAGCTGACTC...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGGTCGAGCTTGGACTCTaGTGCCCACTTGGCCAATTT +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLVELGL*CPLGQF
Trigger: AAATTGGCCAAGTGGGCAGCAGAGTCCAAGCTCGAC...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGAAGTTAAACTCCTGTTaGAGCTGCTCCAGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPKLNSC*SCSSLK
Trigger: CTTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTT...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGCACTTTGCAGATTCTaGATTCTAGGATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSLMSEGEGETGVSHGERALCRF*ILGWKW
Trigger: CCACTTCCATCCTAGAATGCAGAATCTGCAAAGTGC...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR GCA 90 bp TTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGCACTTTGCAGATTCTaGATTCTAGGATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FHLCQKGKGKQVCRMVREALCRF*ILGWKW
Trigger: CCACTTCCATCCTAGAATGCAGAATCTGCAAAGTGC...CTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTACCCTGCACGGGATaGTCCCAGCCTAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGLPCTG*SQPRRG
Trigger: TCCCCTCCTAGGCTGGGAGCATCCCGTGCAGGGTAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651385.1
CDS-3UTR GCA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCTTTCATGAAAAGCAATaGCTGAAGGGTGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: LMSEGEGETGVSHGERGSFHEKQ*LKGGHF
Trigger: AAAATGACCACCCTTCAGGCATTGCTTTTCATGAAA...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGGGGGACAGCAGTTGGTaGCTGTTTCTTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLGDSSW*LFLSWL
Trigger: CAGCCAAGAAAGAAACAGCCACCAACTGCTGTCCCC...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAATCCTGCACAGGCTCCTaGGGGTTGCCAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKSCTGS*GLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGA...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GGTCTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCATGCGTCCCCTCATaGAAAATTCTGCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLTQSYREPCEFSTWDFNSCVPS*KILQSL
Trigger: CAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGA...GTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSVWAEE*GFPAAM
Trigger: CATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGAC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGGTGCGTGCCACCTCTaGTCTTACCCCGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIGACHL*SYPGVK
Trigger: CTTTACACCGGGGTAAGACCAGAGGTGGCACGCACC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTGTCTTGCAAGGTACTaGTCATATAACTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHCLARY*SYNWAS
Trigger: GCTGGCCCAGTTATATGACCAGTACCTTGCAAGACA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCCGATCAGTGGGCTCTaGAGGGCTGGGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGPISGL*RAGLHK
Trigger: CTTGTGAAGCCCAGCCCTCCAGAGCCCACTGATCGG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTCCGATCAGTGGGCTCTaGAGGGCTGGGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCPISGL*RAGLHK
Trigger: CTTGTGAAGCCCAGCCCTCCAGAGCCCACTGATCGG...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTCAAAGGGGCATTGTTaGGGTCATTTGGGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLSKGHC*GHLGRA
Trigger: AGCTCGACCCAAATGACCCCAACAATGCCCCTTTGA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCGCTACTATGGCCCTATaGGTGTCTATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFATMAL*VSMCSL
Trigger: CAAGGAACACATAGACACCCATAGGGCCATAGTAGC...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGATTCCAGCTAGGGTTTaGTCCTTCAGCCGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLIPARV*SFSRSR
Trigger: ACGACTACGGCTGAAGGACCAAACCCTAGCTGGAAT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACATTCCAGCTAGGGTTTaGTCCTTCAGCCGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHIPARV*SFSRSR
Trigger: ACGACTACGGCTGAAGGACCAAACCCTAGCTGGAAT...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACTCTCAATACGAGTATaGATTCCACTTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPLSIRV*IPLPLS
Trigger: TGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACTCTCCAGGAACCAGCTaGGGCTCAATGGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHSPGTS*GSMVIK
Trigger: CTTTATTACCATTGAGCCCCAGCTGGTTCCTGGAGA...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGGAAAGGCTGAGTGTTaGAGATGCCCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIGKAEC*RCPWAP
Trigger: AGGAGCCCAGGGGCATCTCCAACACTCAGCCTTTCC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp AGAAACCTCCCTCATTTCTTCCAAACATCTGATTCAAGCCTCACTAGGTTAACAGGAAAGGCTGAGTGTTaGAGATGCCCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RNLPHFFQTSDSSLTRLTGKAEC*RCPWAP
Trigger: AGGAGCCCAGGGGCATCTCCAACACTCAGCCTTTCC...TGTTAACCTAGTGAGGCTTGAATCAGATGTTTGGAAGAAATGAGGGAGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATATTCTAGGATGGAAGTaGAGAGAGACGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHILGWK*RETVLL
Trigger: CAACAGCACCGTCTCTCTCCACTTCCATCCTAGAAT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp GCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTATTCTAGGATGGAAGTaGAGAGAGACGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ATGSHVNSVLGISTQTWSILGWK*RETVLL
Trigger: CAACAGCACCGTCTCTCTCCACTTCCATCCTAGAAT...ACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp GGTCATTTTCCCTACAATGAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAGTGAGTCACCGTGCCTaGCCTGCCCAGGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GHFPYNEQVIPNVHCTGEVSHRA*PAQALF
Trigger: AAAAAGAGCCTGGGCAGGCCAGGCACGGTGACTCAC...TTCCCCAGTACAATGAACATTAGGAATTACCTGCTCATTGTAGGGAAAATGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGGTGTCATTCTCCTGGTaGTGGCAGGTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQVSFSW*WQVSPQ
Trigger: CTGAGGAGAAACCTGCCACCACCAGGAGAATGACAC...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTCTGCCTACTGGGTATaGAGAGCATTTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHSAYWV*RAFLFP
Trigger: TGGAAAGAGAAATGCTCTTCATACCCAGTAGGCAGA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACGCAATCTGTTCTCCATaGTGTTCTGATTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHAICSP*CSDWCV
Trigger: CACGCACCAATCAGAACATCATGGAGAACAGATTGC...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGAAAATCTGCCCAAAGTaGACTCGGAAGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YHQMRQCQARRESRTHIEKICPK*TRKSAP
Trigger: AGGAGCAGACTTCCGAGTTCACTTTGGGCAGATTTT...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTATGAGACACTTTCCCTaGGGTCATCAGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCMRHFP*GHQSQL
Trigger: CAGCTGACTCTGATGACCTCAGGGAAAGTGTCTCAT...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGGAAACGATTTATCACTaGTTCTCTAACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FIPARVWSFSRSRMANCSETIYH*FSNLLE
Trigger: CTCCAGCAGGTTAGAGAATCAGTGATAAATCGTTTC...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACACATTAAGGAGCTCCTaGGGAGGGTTTAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHTLRSS*GGFKGL
Trigger: CAAACCTTTAAACCCTCCTCAGGAGCTCCTTAATGT...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTAATTTCTCATCTTCCTaGGACTCAAACTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPNFSSS*DSNFSR
Trigger: TCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATT...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634028.2
CDS-3UTR TCA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCAATTTCTCATCTTCCTaGGACTCAAACTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: VLGEAACFSLNILEDLDGNFSSS*DSNFSR
Trigger: TCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATT...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR TCA 90 bp AAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTAATAGCATCTGCCTCTGGTaGGGCCTTAGGAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KQCLKGGHFPYNEQVIPNSICLW*GLRKLS
Trigger: TGAAAGCTTCCTAAGGCCTCACCAGAGGCAGATGCT...ATTAGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR TCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGCTACAGGGAGCCATGTaGATTCAGTACTTGGGATTT +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWLQGAM*IQYLGF
Trigger: AAATCCCAAGTACTGAATTCACATGGCTCCCTGTAG...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGTGCACTCCAGCTAGGTaGCAGAGCAAGACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKCTPAR*QSKTLS
Trigger: AGAGAGGGTCTTGCTCTGTCACCTAGCTGGAGTGCA...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTCAGGCTCCTGGGGGTTaGCAAGGTGGGATTTTTCGG +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCQAPGG*QGGIFR
Trigger: CCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTG...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHAISPS*VPSWKI
Trigger: AATTTTCCATGAGGGGACGCATGAGGGAGAAATTGC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTGCTTTGGACCTCGCTaGTTGCAATTTCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLCFGPR*LQFLPH
Trigger: ATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTGCTTTGGACCTCGCTaGTTGCAATTTCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHCFGPR*LQFLPH
Trigger: ATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCA...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTTTCCCTGGCTCTGTaGCAAATTCAGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLSLAL*QIQSPI
Trigger: AATTGGAGACTGAATTTGGCACAGAGCCAGGGAAAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFLSSSL*RWFFFF
Trigger: GAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAG...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTATGTAGGGACTGTCTaGCTACTGGGTATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLYVGTV*LLGMKS
Trigger: GCTCTTCATACCCAGTAGGCAGACAGTCCCTACATA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTGTTCTGATTGGTGCGTaGCACCTCTGGTCTTACCCC +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACVLIGA*HLWSYP
Trigger: GGGGTAAGACCAGAGGTGGCACGCACCAATCAGAAC...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGGTTCTGATTGGTGCGTaGCACCTCTGGTCTTACCCC +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKVLIGA*HLWSYP
Trigger: GGGGTAAGACCAGAGGTGGCACGCACCAATCAGAAC...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGTTCTGATTGGTGCGTaGCACCTCTGGTCTTACCCC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIVLIGA*HLWSYP
Trigger: GGGGTAAGACCAGAGGTGGCACGCACCAATCAGAAC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTCTGCCTTAATGCTCTaGTCCTGTGTTAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHSALML*SCVSTG
Trigger: GCCAGTACTAACACAGGAGCAGAGCATTAAGGCAGA...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAATATGCTTCTTCATCTaGTTTCTGGTCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPICFFI*FLVSFF
Trigger: GAAAAAGCTGACCAGAAAGCAGATGAAGAAGCATAT...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTCTCGGGATACGGCTCTaGAATCTCATCACCGGGATG +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACLGIRL*NLITGM
Trigger: CATCCCGGTGATGAGATTGCAGAGCCGTATCCCGAG...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGCTCCTGCTCTATCACTaGCCGATCAGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QLLEVISHLPETQTFLEWLLLYH*PISGLW
Trigger: CCAGAGCCCACTGATCGGGCAGTGATAGAGCAGGAG...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR GCA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGGGCCAGTTGACTATTTaGAAATTGAAAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPGQLTI*KLKICP
Trigger: TGGGCAGATTTTCAATTTGCAAATAGTCAACTGGCC...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCTTCTCCAATGGCCCATaGCACACTATGAGACACTTT +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLFSNGP*HTMRHF
Trigger: AAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAA...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGGCAACCGAGATAAGCTaGATCAAAGGGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLATEIS*IKGALL
Trigger: CAACAATGCCCCTTTGATGCAGCTTATCTCGGTTGC...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTACTGATTCTCTAACCTaGTGGAGGTACTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGTDSLT*WRYLAT
Trigger: AGTAGCCAAGTACCTCCAGCAGGTTAGAGAATCAGT...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCGAAGACCTCGACGGCTaGTGGAATTTGCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTEDLDG*WNLLTA
Trigger: GGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTC...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTGGGTTGGGCTGTACGTaGTTGGGGAAGCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCGLGCT*LGKQHA
Trigger: AGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCC...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TATAAAGAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: YKEKRFILAHCSADCAISRWGRI*QQAREK
Trigger: TTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCT...GCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTCTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652443.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIRTPFP*GQQLVA
Trigger: AGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTCATGCGTCCCCTCATaGAAAATTCTGCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFSCVPS*KILQSL
Trigger: CAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGCCAATTCTTTCTTACTaGGACTTCGTAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWPILSY*DFVSVW
Trigger: CCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGG...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACCCAATTCTTTCTTACTaGGACTTCGTAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHPILSY*DFVSVW
Trigger: CCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGG...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGTTCTACCTCTTTCCCTaGCTCTGTGCCAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWFYLFP*LCAKFS
Trigger: ACTGAATTTGGCACAGAGCCAGGGAAAGAGGTAGAA...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTTCTACCTCTTTCCCTaGCTCTGTGCCAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHFYLFP*LCAKFS
Trigger: ACTGAATTTGGCACAGAGCCAGGGAAAGAGGTAGAA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATAAGCCAGGTGGAACCTaGGGTTTAGGCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHKPGGT*GLGLIF
Trigger: AAAAATCAAGCCTAAACCCCAGGTTCCACCTGGCTT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTAAGCCAGGTGGAACCTaGGGTTTAGGCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: ATGSHVNSVLGISTQTWSKPGGT*GLGLIF
Trigger: AAAAATCAAGCCTAAACCCCAGGTTCCACCTGGCTT...ACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTAAGCCAGGTGGAACCTaGGGTTTAGGCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSKPGGT*GLGLIF
Trigger: AAAAATCAAGCCTAAACCCCAGGTTCCACCTGGCTT...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQSSLCR*FFFFPF
Trigger: GAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGA...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGGTGCGTGCCACCTCTaGTCTTACCCCGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGGACHL*SYPGVK
Trigger: CTTTACACCGGGGTAAGACCAGAGGTGGCACGCACC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTGTCTTGCAAGGTACTaGTCATATAACTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLCLARY*SYNWAS
Trigger: GCTGGCCCAGTTATATGACCAGTACCTTGCAAGACA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTGATGAGGTTTTTCTaGATCAAGGCCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLMRFF*IKASLN
Trigger: GTTCAGACTGGCCTTGATCCAGAAAAACCTCATCAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSWGTGH*VLRFLP
Trigger: TGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIWGTGH*VLRFLP
Trigger: TGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTCCCGTTTTCTCCAATaGCCCATGCCACACTATGAG +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLSRFLQ*PMPHYE
Trigger: CTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGA...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTATTGTTGGGGTCATTTaGGTCGAGCTTGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCIVGVI*VELGLC
Trigger: GCAGAGTCCAAGCTCGACCCAAATGACCCCAACAAT...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGGGTACTTGGCTACTATaGCCCTATGGGTGTCTATGT +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLGTWLL*PYGCLC
Trigger: ACATAGACACCCATAGGGCCATAGTAGCCAAGTACC...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTTCACTGACTGCAGACTaGCTGTGCTATAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGSLTAD*LCYNLH
Trigger: ATGGAGATTATAGCACAGCCAGTCTGCAGTCAGTGA...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTATATATTGTGCTAAATaGCATTTTCACACATCCCAG +
Preference number: 4 (lower is better)
Translates to: LPASSLECRKLAQCSPAAIYCAK*HFHTSQ
Trigger: CTGGGATGTGTGAAAATGCCATTTAGCACAATATAT...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTGTAGCCCAGAAGAACTaGGGGAATATCTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPVAQKN*GNIYFK
Trigger: TTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTAC...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTCTCCAGGAACCAGCTaGGGCTCAATGGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHSPGTS*GSMVIK
Trigger: CTTTATTACCATTGAGCCCCAGCTGGTTCCTGGAGA...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp ACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGGGATTCATTTTGGCTaGGATGGGTCCCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: TQSYREPCEFSTWDFNSDGIHFG*DGSLKK
Trigger: TTTCTTAAGGGACCCATCCCAGCCAAAATGAATCCC...GTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACGGGATTCATTTTGGCTaGGATGGGTCCCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHGIHFG*DGSLKK
Trigger: TTTCTTAAGGGACCCATCCCAGCCAAAATGAATCCC...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTCAAACTTTTCTCGAATaGACTCTCCAGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGQTFLE*TLQEPA
Trigger: AGCTGGTTCCTGGAGAGTCCATTCGAGAAAAGTTTG...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634028.2
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTCATTTTGGCTGGGATaGGTCCTTGTTAATGTCAGC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHSFWLG*VLVNVS
Trigger: GCTGACATTAACAAGGACCCATCCCAGCCAAAATGA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp GCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTATTTCAACTCAGACGTaGAGTGTCATTCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ATGSHVNSVLGISTQTWSISTQT*SVILLV
Trigger: CACCAGGAGAATGACACTCCACGTCTGAGTTGAAAT...ACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCCATGGCTGGGGCACTaGTCATTGGGTGTTACGCTT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIPWLGH*SLGVTL
Trigger: AAGCGTAACACCCAATGACCAGTGCCCCAGCCATGG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATATGGAACTTGACTCTTaGGTAACTTTGGGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHMELDS*VTLGVN
Trigger: GTTGACTCCCAAAGTTACTCAAGAGTCAAGTTCCAT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp GCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTCAGAATCATGGAACTTaGCTCTTGAGTAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: ATGSHVNSVLGISTQTWSQNHGT*LLSNFG
Trigger: CCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTG...ACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTCAGAATCATGGAACTTaGCTCTTGAGTAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGQNHGT*LLSNFG
Trigger: CCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTG...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCAGAATCATGGAACTTaGCTCTTGAGTAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHQNHGT*LLSNFG
Trigger: CCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGCATAATCTGCAGGTCTaGCTGCTACAAAATCGTCAG +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLHNLQV*LLQNRQ
Trigger: CTGACGATTTTGTAGCAGTCAGACCTGCAGATTATG...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTCCTAGTGGCCGACTaGCTGTCCTGGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASLLVAD*LSWTPP
Trigger: AGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAG...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTTTGTTCTGCCAGCTTaGAAAGGCTTAGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLFVLPA*KGLGPK
Trigger: TTTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGACAGATACCACCAAATaGGACAGTGTCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLTDTTK*DSVRQE
Trigger: TTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATAAGTATCCAAGACACTaGAGACTTAGACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHKYPRH*RLRLHS
Trigger: TGAGTGGAGTCTAAGTCTTCAGTGTCTTGGATACTT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTAGACTCAAATTGGGCTaGAGAGGTCGAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCRLKLG*RGRGCS
Trigger: GCTGCAGCCTCGACCTCTTCAGCCCAATTTGAGTCT...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCACTTTCCCTGGCTCTGTaGCAAATTCAGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSLSLAL*QIQSPI
Trigger: AATTGGAGACTGAATTTGGCACAGAGCCAGGGAAAG...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCCTTTCCCTGGCTCTGTaGCAAATTCAGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFLSLAL*QIQSPI
Trigger: AATTGGAGACTGAATTTGGCACAGAGCCAGGGAAAG...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAAAGGCTTGATTTTTCGTaGAGAATCATGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: CSRGHRYHQMRQCQARRERLDFS*RIMELD
Trigger: GTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCT...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGCAGAGCTAGGATCCTaGCGTCATCTCCAAACCATC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIAELGS*RHLQTI
Trigger: GATGGTTTGGAGATGACGGCAGGATCCTAGCTCTGC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTGCAGAGCTAGGATCCTaGCGTCATCTCCAAACCATC +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACAELGS*RHLQTI
Trigger: GATGGTTTGGAGATGACGGCAGGATCCTAGCTCTGC...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGCAGAGCTAGGATCCTaGCGTCATCTCCAAACCATC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSAELGS*RHLQTI
Trigger: GATGGTTTGGAGATGACGGCAGGATCCTAGCTCTGC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTGGCTGCCAAAACATaGTCTCGGCTAAAACAGGGA +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLLAAKT*SRLKQG
Trigger: TCCCTGTTTTAGCCGAGAGCATGTTTTGGCAGCCAA...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCCTGGGCCAGCTTGGCTaGCAAAACATGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFLGQLG*QNMLSA
Trigger: AGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCCAG...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCATTCAGCTTGAATTTCTaGTTCATATGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPFSLNF*FICFFI
Trigger: GATGAAGAAGCATATGAAGCAGAAATTCAAGCTGAA...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCCGAAATCCGATGTTCTaGTGTGACAATGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFRNPMF*CDNGGI
Trigger: AATTCCTCCATTGTCACAGCAGAACATCGGATTTCG...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGGAAGACCTCGACGGCTaGTGGAATTTGCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEEDLDG*WNLLTA
Trigger: GGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTC...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTGAAATTGATCAGATGTaGTCCAGAGGTCACAGATAC +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGEIDQM*SRGHRY
Trigger: GTATCTGTGACCTCTGGAGCACATCTGATCAATTTC...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGAGCCACTTTCTTTCTTaGAGGGACATCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWSHFLS*RDISFF
Trigger: GAAAAAGCTGATGTCCCTGCAAGAAAGAAAGTGGCT...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGGGGACAGCAGTTGGTaGCTGTTTCTTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIGDSSW*LFLSWL
Trigger: CAGCCAAGAAAGAAACAGCCACCAACTGCTGTCCCC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp AGAAACCTCCCTCATTTCTTCCAAACATCTGATTCAAGCCTCACTAGGTTAACAGGGGACAGCAGTTGGTaGCTGTTTCTTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RNLPHFFQTSDSSLTRLTGDSSW*LFLSWL
Trigger: CAGCCAAGAAAGAAACAGCCACCAACTGCTGTCCCC...TGTTAACCTAGTGAGGCTTGAATCAGATGTTTGGAAGAAATGAGGGAGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp GAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCATGGTGTGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: EKRFILAHCSADCAISMVWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...CACCATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp GAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAGAAGAAAAGGCGTGTGTATGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: EQVIPNVHCTGEEEKACVWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...TACACACGCCTTTTCTTCTTCCCCAGTACAATGAACATTAGGAATTACCTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGACTTCGTAAGCGTCTaGGCCGAGGAGTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGDFVSV*AEEWGF
Trigger: AAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGCCAATTCTTTCTTACTaGGACTTCGTAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLPILSY*DFVSVW
Trigger: CCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGG...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTCTACCTCTTTCCCTaGCTCTGTGCCAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLFYLFP*LCAKFS
Trigger: ACTGAATTTGGCACAGAGCCAGGGAAAGAGGTAGAA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGAAGCCAGGTGGAACCTaGGGTTTAGGCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLKPGGT*GLGLIF
Trigger: AAAAATCAAGCCTAAACCCCAGGTTCCACCTGGCTT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTAGAAGGGAAGCCAGGTaGAACCTGGGGTTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACRREAR*NLGFRL
Trigger: AAGCCTAAACCCCAGGTTCCACCTGGCTTCCCTTCT...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGAGAAGGGAAGCCAGGTaGAACCTGGGGTTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKRREAR*NLGFRL
Trigger: AAGCCTAAACCCCAGGTTCCACCTGGCTTCCCTTCT...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGAAGGGAAGCCAGGTaGAACCTGGGGTTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSRREAR*NLGFRL
Trigger: AAGCCTAAACCCCAGGTTCCACCTGGCTTCCCTTCT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGATATCAATGTCCAGTTaGAAATTTCCAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FIPARVWSFSRSRMANCSISMSS*KFPGGS
Trigger: AGACCCTCCTGGAAATTTCCAACTGGACATTGATAT...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGCTGATGAGGTTTTTCTaGATCAAGGCCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLLMRFF*IKASLN
Trigger: GTTCAGACTGGCCTTGATCCAGAAAAACCTCATCAG...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCCCGATCAGTGGGCTCTaGAGGGCTGGGCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGPISGL*RAGLHK
Trigger: CTTGTGAAGCCCAGCCCTCCAGAGCCCACTGATCGG...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLLEVISHLPETQTFLEWWGTGH*VLRFLP
Trigger: TGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCA...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTCGAGACCTCCGCTCTaGGGCACTGGTCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGSRPPL*GTGHWV
Trigger: CACCCAATGACCAGTGCCCCAGAGCGGAGGTCTCGA...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGGTCATCAGAGTCAGCTaGTTACTGCCATCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLVIRVS*LLPSAS
Trigger: TGAAGCTGATGGCAGTAACCAGCTGACTCTGATGAC...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGCATTTGGGTCGAGCTTaGACTCTGCTGCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEHLGRA*TLLPTW
Trigger: CCAAGTGGGCAGCAGAGTCCAAGCTCGACCCAAATG...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAATGCCGGCTTCCTCACTaGAATGTCGTAAGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKCRLPH*NVVSSH
Trigger: GTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCA...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTCATCTTTTCTCGAATaGACTCTCCAGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFSSFLE*TLQEPA
Trigger: AGCTGGTTCCTGGAGAGTCCATTCGAGAAAAGATGA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGTTCTGCATTCTAGGATaGAAGTGGAGAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQFCILG*KWRETV
Trigger: CACCGTCTCTCTCCACTTCCATCCTAGAATGCAGAA...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTTCTGCATTCTAGGATaGAAGTGGAGAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCFCILG*KWRETV
Trigger: CACCGTCTCTCTCCACTTCCATCCTAGAATGCAGAA...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp TATAAAGAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCAACCAGCTCTCTCCGTaGGCCTCTCCGGACTGTCAT +
Preference number: 4 (lower is better)
Translates to: YKEKRFILAHCSADCAISNQLSP*ASPDCH
Trigger: ATGACAGTCCGGAGAGGCCCACGGAGAGAGCTGGTT...GCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp GAAAAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTTATATGTGTCCTCAATaGCAAGGTCACCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EKQCLKGGHFPYNEQVIPYMCPQ*QGHQEP
Trigger: AGGCTCCTGGTGACCTTGCCATTGAGGACACATATA...AGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTTGAGAACCATGGCTaGGGCACTGGTCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFENHG*GTGHWV
Trigger: CACCCAATGACCAGTGCCCCAGCCATGGTTCTCAAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAATGGAACTTGACTCTTaGGTAACTTTGGGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSMELDS*VTLGVN
Trigger: GTTGACTCCCAAAGTTACTCAAGAGTCAAGTTCCAT...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCCTTCCTCCTCCTCTTaGTTAGTTCCCGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIPSSSS*LVPALC
Trigger: ACATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGAGGGTCTCCAGATCTaGTCACATGCTGACTACTGT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIEGLQI*SHADYC
Trigger: ACAGTAGTCAGCATGTGATCAGATCTGGAGACCCTC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGAGGGTCTCCAGATCTaGTCACATGCTGACTACTGT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSEGLQI*SHADYC
Trigger: ACAGTAGTCAGCATGTGATCAGATCTGGAGACCCTC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGGAAACGATTTATCACTaGTTCTCTAACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLETIYH*FSNLLE
Trigger: CTCCAGCAGGTTAGAGAATCAGTGATAAATCGTTTC...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAATTCACTGAACATCCTTaGAGACCTCGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKFTEHP*RPRRLL
Trigger: CAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAA...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTACATTAAGGAGCTCCTaGGGAGGGTTTAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCTLRSS*GGFKGL
Trigger: CAAACCTTTAAACCCTCCTCAGGAGCTCCTTAATGT...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGACAGATACCACCAAATaGGACAGTGTCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLTDTTK*DSVRQE
Trigger: TTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGT...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCAGCAGTTGGTGGCTTaGAAAGATTTACCCTGCACG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIQQLVA*KDLPCT
Trigger: CGTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651385.1
CDS-3UTR TCA 90 bp GAAAAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTATGAAAAGCAATGCCTaGAGGGTGGTCATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EKQCLKGGHFPYNEQVIPMKSNA*RVVIFP
Trigger: AGGGAAAATGACCACCCTTCAGGCATTGCTTTTCAT...AGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCACTTGGAGACCTTGTaGGAACAGTTTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSHLETL*EQFSRP
Trigger: GGGCCTAGAAAACTGTTCTCACAAGGTCTCCAAGTG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTTCACGTTGGGATATTaGAGATTCCAGTGTACAACA +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHFTLGY*RFQCTT
Trigger: TGTTGTACACTGGAATCTTCAATATCCCAACGTGAA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATAACTCGGAGGCTGACTaGCTTTATTTGAATTCTCAT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHNSEAD*LYLNSH
Trigger: ATGAGAATTCAAATAAAGTCAGTCAGCCTCCGAGTT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATAATGAACTCGGAGGCTaGCTGACTTTATTTGAATTC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHNELGG*LTLFEF
Trigger: GAATTCAAATAAAGTCAGTCAGCCTCCGAGTTCATT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATACATTAGCAGAAGTTTaGAACCAAGACTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHTLAEV*NQDCEK
Trigger: CTTCTCACAGTCTTGGTTTCAAACTTCTGCTAATGT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTGTCTTCCCATGTCTaGATCCTCATCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLSSHV*ILIIFN
Trigger: ATTGAAAATGATGAGGATGCAGACATGGGAAGACAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR GCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCCAGCAATGCACTTTCTaGTTTGGACCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTQQCTF*FGPRCL
Trigger: CAAGCAGCGAGGTCCAAAGCAGAAAGTGCATTGCTG...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGGATTTCCTGCAGCAATaGACTTTCTGCTTTGGACCT +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLDFLQQ*TFCFGP
Trigger: AGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATC...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSGVGIS*SNALSA
Trigger: AGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTAGGCTTGATTTTTCGTaGAGAATCATGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGRLDFS*RIMELD
Trigger: GTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCT...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTGATGCTTTCATAATCTaGAGGTCTGACTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGDAFII*RSDCYK
Trigger: TTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATC...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGATGCTTTCATAATCTaGAGGTCTGACTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHDAFII*RSDCYK
Trigger: TTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCGATGCTTTCATAATCTaGAGGTCTGACTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFDAFII*RSDCYK
Trigger: TTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATC...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCTTCTTTCGGGGTCCTaGATCAGCAATCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILLSGS*ISNLFS
Trigger: GGAGAACAGATTGCTGATGCAGGACCCCGAAAGAAG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTCTTCTTGGCCCTTTaGACTTTCCTCCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFFLAL*TFLQAF
Trigger: GAAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACACCGGGATGTTCTTCTaGTGCTTGTTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHTGMFF*CLFPFL
Trigger: AAGAAAAGGAAACAAGCAGCAGAAGAACATCCCGGT...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACCGAAATCCGATGTTCTaGTGTGACAATGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHRNPMF*CDNGGI
Trigger: AATTCCTCCATTGTCACAGCAGAACATCGGATTTCG...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCAACTCCTGTTGCAGCTaGTCCAGTCTAAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFNSCCS*SSLKKS
Trigger: TGATTTCTTTAGACTGGAGCAGCTGCAACAGGAGTT...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGGGTTGGGCTGTACGTaGTTGGGGAAGCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASGLGCT*LGKQHA
Trigger: AGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGGAAATTGATCAGATGTaGTCCAGAGGTCACAGATAC +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLEIDQM*SRGHRY
Trigger: GTATCTGTGACCTCTGGAGCACATCTGATCAATTTC...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTTTACAAAAGGCACTTTaGAGATTCTGCATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGLQKAL*RFCILG
Trigger: TCCTAGAATGCAGAATCTGCAAAGTGCCTTTTGTAA...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR GCA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTCTTATTTCCCAACTTTaGCATAGGGAAAACAGTCTA +
Preference number: 4 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGLISQL*HRENSL
Trigger: TAGACTGTTTTCCCTATGGCAAAGTTGGGAAATAAG...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR GCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTACATCTGTAATTCAATaGCCAGGCATTACACATACG +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTTSVIQ*PGITHT
Trigger: CGTATGTGTAATGCCTGGGCATTGAATTACAGATGT...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCTTGGGGACAGCAGTTaGTGGCTGTTTCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLGDSS*WLFLSW
Trigger: CCAAGAAAGAAACAGCCACCAACTGCTGTCCCCAAG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASVWAEE*GFPAAM
Trigger: CATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGAC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTAAGCCAGGTGGAACCTaGGGTTTAGGCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCKPGGT*GLGLIF
Trigger: AAAAATCAAGCCTAAACCCCAGGTTCCACCTGGCTT...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTAGAAGGGAAGCCAGGTaGAACCTGGGGTTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGRREAR*NLGFRL
Trigger: AAGCCTAAACCCCAGGTTCCACCTGGCTTCCCTTCT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFISSLCR*FFFFPF
Trigger: GAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACSSLCR*FFFFPF
Trigger: GAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGA...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATATATCAATGTCCAGTTaGAAATTTCCAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHISMSS*KFPGGS
Trigger: AGACCCTCCTGGAAATTTCCAACTGGACATTGATAT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTATATCAATGTCCAGTTaGAAATTTCCAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSISMSS*KFPGGS
Trigger: AGACCCTCCTGGAAATTTCCAACTGGACATTGATAT...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCATAACTGGGCCAGCTTaGCTGCCAAAACATGCTCTC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIITGPA*LPKHAL
Trigger: GAGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTAT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTATAACTGGGCCAGCTTaGCTGCCAAAACATGCTCTC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSITGPA*LPKHAL
Trigger: GAGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTAT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFWGTGH*VLRFLP
Trigger: TGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCA...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCTCCGCTCTGGGGCACTaGTCATTGGGTGTTACGCTT +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFSALGH*SLGVTL
Trigger: AAGCGTAACACCCAATGACCAGTGCCCCAGAGCGGA...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTATTGTTGGGGTCATTTaGGTCGAGCTTGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACIVGVI*VELGLC
Trigger: GCAGAGTCCAAGCTCGACCCAAATGACCCCAACAAT...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTATAATTTCGGAATTCTaGCACCTCTTGGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTIISEF*HLLASK
Trigger: CTTAGAAGCCAAGAGGTGCCAGAATTCCGAAATTAT...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTCACTGACTGCAGACTaGCTGTGCTATAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCSLTAD*LCYNLH
Trigger: ATGGAGATTATAGCACAGCCAGTCTGCAGTCAGTGA...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAACCGAGTCAGATGGCGTaGCCTCCAGTCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKPSQMA*PPVHDF
Trigger: AAAATCATGGACTGGAGGCCACGCCATCTGACTCGG...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp TTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGAAAAGAGGTTTATTTTaGCTCACTGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: FHLCQKGKGKQVCRMVREKRGLF*LTVLQT
Trigger: AGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTT...CTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTTGAGAACCATGGCTaGGGCACTGGTCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGFENHG*GTGHWV
Trigger: CACCCAATGACCAGTGCCCCAGCCATGGTTCTCAAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR CAA 72 bp ATACACTGTAAGAAGCAGCTCGTGGGTTTTATAGATTaGCAAAGAGTAGAGCTAGCTCCCAGTATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IHCKKQLVGFID*QRVELAPSMQV
Trigger: CACCTGCATACTGGGAGCTAGCTCTACTCTTTGCAAATCTATAAAACCCACGAGCTGCTTCTTACAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCCTTCCTCCTCCTCTTaGTTAGTTCCCGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGPSSSS*LVPALC
Trigger: ACATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGGAGGGTCTCCAGATCTaGTCACATGCTGACTACTGT +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEEGLQI*SHADYC
Trigger: ACAGTAGTCAGCATGTGATCAGATCTGGAGACCCTC...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GGTAAATTAGCTCTTCAGGCTGAACACTGGAAAGGCCAGGATATGGAAGGCTTCAACAGGGATGATGAGTaGAGATTAACCCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: GKLALQAEHWKGQDMEGFNRDDE*RLTLKY
Trigger: ATATTTCAGGGTTAATCTTCACTCATCATCCCTGTT...GAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTAAAATCTGCCCAAAGTaGACTCGGAAGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACKICPK*TRKSAP
Trigger: AGGAGCAGACTTCCGAGTTCACTTTGGGCAGATTTT...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGATGAGACACTTTCCCTaGGGTCATCAGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEMRHFP*GHQSQL
Trigger: CAGCTGACTCTGATGACCTCAGGGAAAGTGTCTCAT...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGCCCATGCCACACTATaGGACACTTTCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASAHATL*DTFPEV
Trigger: GACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCGCCCATGCCACACTATaGGACACTTTCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGAHATL*DTFPEV
Trigger: GACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGC...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTCTTGGCTTCTAAGATaGAGAAGCCTAAATCGTTTG +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLSWLLR*RSLNRL
Trigger: CAAACGATTTAGGCTTCTTCATCTTAGAAGCCAAGA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCTTCACTGAACATCCTTaGAGACCTCGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFFTEHP*RPRRLL
Trigger: CAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAA...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTCAGCATGCTTTTCACTaGACATCCTTGAAGACCTCG +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACQHAFH*TSLKTS
Trigger: CGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTG...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTGGCAAACTGTTCGTTaGAAAGAGACTTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLWQTVR*KETSTK
Trigger: CTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCATAGCTTGGGCCTGGTaGCATCAAAATTTATCCTTA +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFIAWAW*HQNLSL
Trigger: TAAGGATAAATTTTGATGTCACCAGGCCCAAGCTAT...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTAACAGAGGCAAGAAGTaGCGCAGAGTAGAGGTACAA +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACNRGKK*RRVEVQ
Trigger: TTGTACCTCTACTCTGCGTCACTTCTTGCCTCTGTT...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTTAGGCCCAAAATGCTaGTATTGGGAACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLLGPKC*YWELLL
Trigger: AAGAAGAAGTTCCCAATATCAGCATTTTGGGCCTAA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634028.2
CDS-3UTR TCA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGAATTTCTCATCTTCCTaGGACTCAAATTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: YHQMRQCQARRESRTHIENFSSS*DSNWAE
Trigger: TTCAGCCCAATTTGAGTCTCAGGAAGATGAGAAATT...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAATTGGACCTCGCTGCTTaGAATTTCTCCCTCATGCGT +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKLDLAA*NFSLMR
Trigger: ACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAA...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTGCTTTGGACCTCGCTaGTTGCAATTTCTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSCFGPR*LQFLPH
Trigger: ATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAACAGCAATGCACTTTCTaGTTTGGACCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKQQCTF*FGPRCL
Trigger: CAAGCAGCGAGGTCCAAAGCAGAAAGTGCATTGCTG...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QLLEVISHLPETQTFLEWGVGIS*SNALSA
Trigger: AGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCC...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR GCA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAAGGCTTGATTTTTCGTaGAGAATCATGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSRLDFS*RIMELD
Trigger: GTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCT...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILSSSL*RWFFFF
Trigger: GAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLSSSL*RWFFFF
Trigger: GAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTATCTGCAGGTCTGACTaGTACAAAATCGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSICRSD*YKIVSH
Trigger: GTGGCTGACGATTTTGTAGCAGTCAGACCTGCAGAT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGGATGCTTTCATAATCTaGAGGTCTGACTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLDAFII*RSDCYK
Trigger: TTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATC...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTATGTAGGGACTGTCTaGCTACTGGGTATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIYVGTV*LLGMKS
Trigger: GCTCTTCATACCCAGTAGGCAGACAGTCCCTACATA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTATGTAGGGACTGTCTaGCTACTGGGTATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTYVGTV*LLGMKS
Trigger: GCTCTTCATACCCAGTAGGCAGACAGTCCCTACATA...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTATGTAGGGACTGTCTaGCTACTGGGTATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSYVGTV*LLGMKS
Trigger: GCTCTTCATACCCAGTAGGCAGACAGTCCCTACATA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTCTGCCTTAATGCTCTaGTCCTGTGTTAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSSALML*SCVSTG
Trigger: GCCAGTACTAACACAGGAGCAGAGCATTAAGGCAGA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCAGTGTTTCAAGCTCTaGCTTAATGCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIQCFKL*LNALLL
Trigger: CAGGAGCAGAGCATTAAGGCAGAGCTTGAAACACTG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTTGGCTGCCAAAACATaGTCTCGGCTAAAACAGGGA +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILAAKT*SRLKQG
Trigger: TCCCTGTTTTAGCCGAGAGCATGTTTTGGCAGCCAA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATATATGCTTCTTCATCTaGTTTCTGGTCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHICFFI*FLVSFF
Trigger: GAAAAAGCTGACCAGAAAGCAGATGAAGAAGCATAT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTCTTCCATCTTCTGTaGGTACTCCTCCGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGFFHLL*VLLRVL
Trigger: GAGCACACGGAGGAGTACGCACAGAAGATGGAAGAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTCCTCTAAGACATCATaGAGTACTTCATCAAAAATG +
Preference number: 4 (lower is better)
Translates to: FIPARVWSFSRSRMANCSSSKTS*STSSKM
Trigger: CATTTTTGATGAAGTACTGCATGATGTCTTAGAGGA...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGTTACAAAAGGCACTTTaGAGATTCTGCATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RATGSHVNSVLGISTQTWLQKAL*RFCILG
Trigger: TCCTAGAATGCAGAATCTGCAAAGTGCCTTTTGTAA...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATAGGGTATGGTACTTGTaGCTTGAAAATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHRVWYL*LENCLL
Trigger: AAGTAAGCAATTTTCAAGGCACAAGTACCATACCCT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGTGGGGGTTGCCAAGGTaGGATTTTTCGGACACCATT +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEWGLPR*DFSDTI
Trigger: AATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCA...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTCATGCGTCCCCTCATaGAAAATTCTGCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSSCVPS*KILQSL
Trigger: CAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTTCATGCGTCCCCTCATaGAAAATTCTGCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACSCVPS*KILQSL
Trigger: CAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGA...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCGACTTCGTAAGCGTCTaGGCCGAGGAGTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGDFVSV*AEEWGF
Trigger: AAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTC...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPESSLCR*FFFFPF
Trigger: GAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGA...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGATATCAATGTCCAGTTaGAAATTTCCAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLISMSS*KFPGGS
Trigger: AGACCCTCCTGGAAATTTCCAACTGGACATTGATAT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTACTGGTCATATAACTaGGCCAGCTTGGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSYWSYN*ASLAAK
Trigger: TTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTACTGGTCATATAACTaGGCCAGCTTGGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIYWSYN*ASLAAK
Trigger: TTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATGTATTTGTAAATCTCTaGAACTCTCGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHVFVNL*NSRRDF
Trigger: GAAATCCCTTCGAGAGTTCCAGAGATTTACAAATAC...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTGTATTTGTAAATCTCTaGAACTCTCGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSVFVNL*NSRRDF
Trigger: GAAATCCCTTCGAGAGTTCCAGAGATTTACAAATAC...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGATAATTTCGGAATTCTaGCACCTCTTGGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLIISEF*HLLASK
Trigger: CTTAGAAGCCAAGAGGTGCCAGAATTCCGAAATTAT...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCATAATTTCGGAATTCTaGCACCTCTTGGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFIISEF*HLLASK
Trigger: CTTAGAAGCCAAGAGGTGCCAGAATTCCGAAATTAT...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGGCTACTATGGCCCTATaGGTGTCTATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKATMAL*VSMCSL
Trigger: CAAGGAACACATAGACACCCATAGGGCCATAGTAGC...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCCTCTCAATACGAGTATaGATTCCACTTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFLSIRV*IPLPLS
Trigger: TGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAG...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCCCGAGTCAGATGGCGTaGCCTCCAGTCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFPSQMA*PPVHDF
Trigger: AAAATCATGGACTGGAGGCCACGCCATCTGACTCGG...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGGCCTCTAGTTTCCAACAGTTACTTATTTCCCAACTTTGCCATAGGGAAAACAATTCTAGGATGGAAGTaGAGAGAGACGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RPLVSNSYLFPNFAIGKTILGWK*RETVLL
Trigger: CAACAGCACCGTCTCTCTCCACTTCCATCCTAGAAT...TGTTTTCCCTATGGCAAAGTTGGGAAATAAGTAACTGTTGGAAACTAGAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp AAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTAATGGGATTCATTTTGGCTaGGATGGGTCCCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: KQCLKGGHFPYNEQVIPNGIHFG*DGSLKK
Trigger: TTTCTTAAGGGACCCATCCCAGCCAAAATGAATCCC...ATTAGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGCTGCAGCCATGTCTTaGAGCAAAAACACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIAAAMS*SKNTSL
Trigger: TAAGCTGGTGTTTTTGCTCCAAGACATGGCTGCAGC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATAGATCTTCTATTTACTaGAGAACTAAGCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHRSSIY*RTKPGI
Trigger: AATCCCAGGCTTAGTTCTCCAGTAAATAGAAGATCT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCATAATCTGCAGGTCTaGCTGCTACAAAATCGTCAG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIHNLQV*LLQNRQ
Trigger: CTGACGATTTTGTAGCAGTCAGACCTGCAGATTATG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGCAATCTGTTCTCCATaGTGTTCTGATTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGAICSP*CSDWCV
Trigger: CACGCACCAATCAGAACATCATGGAGAACAGATTGC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGGCAATCTGTTCTCCATaGTGTTCTGATTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEAICSP*CSDWCV
Trigger: CACGCACCAATCAGAACATCATGGAGAACAGATTGC...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTGAAGGAAATGGCTTaGTGGGGTTTGGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGLKEMA*WGLAEL
Trigger: TAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCGAGGGTCTCCAGATCTaGTCACATGCTGACTACTGT +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFEGLQI*SHADYC
Trigger: ACAGTAGTCAGCATGTGATCAGATCTGGAGACCCTC...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGAACAGGGATGATGAGTaGAGATTAACCCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLNRDDE*RLTLKY
Trigger: ATATTTCAGGGTTAATCTTCACTCATCATCCCTGTT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCAACAGGGATGATGAGTaGAGATTAACCCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFNRDDE*RLTLKY
Trigger: ATATTTCAGGGTTAATCTTCACTCATCATCCCTGTT...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGACACCTCCTTGTTGTTaGACAGCACTTTTAAGTACA +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLTPPCC*TALLST
Trigger: TGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGT...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAAAAATCTGCCCAAAGTaGACTCGGAAGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKKICPK*TRKSAP
Trigger: AGGAGCAGACTTCCGAGTTCACTTTGGGCAGATTTT...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCCACAACATCTTTCACTaGCTGCAGACTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFHNIFH*LQTGCA
Trigger: AGCACAGCCAGTCTGCAGTCAGTGAAAGATGTTGTG...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp AAGCAATGCCTGAAGGGTGGTCATTTTCCCTACAATGAGCAGGTAATTCCTAATCTAATCCACTTTTCATaGAAAGCAATGCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KQCLKGGHFPYNEQVIPNLIHFS*KAMPEG
Trigger: CCCTTCAGGCATTGCTTTTCATGAAAAGTGGATTAG...ATTAGGAATTACCTGCTCATTGTAGGGAAAATGACCACCCTTCAGGCATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR GCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGCTGTCTTCCCATGTCTaGATCCTCATCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLLSSHV*ILIIFN
Trigger: ATTGAAAATGATGAGGATGCAGACATGGGAAGACAG...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR GCA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: INRFNQGSSYHIVGSNPEAISPS*VPSWKI
Trigger: AATTTTCCATGAGGGGACGCATGAGGGAGAAATTGC...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGATTTCCTGCAGCAATaGACTTTCTGCTTTGGACCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIDFLQQ*TFCFGP
Trigger: AGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCGATTTCCTGCAGCAATaGACTTTCTGCTTTGGACCT +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTDFLQQ*TFCFGP
Trigger: AGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATC...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTAGGCTTGATTTTTCGTaGAGAATCATGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCRLDFS*RIMELD
Trigger: GTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCT...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCLSSSL*RWFFFF
Trigger: GAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAG...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTATCTGCAGGTCTGACTaGTACAAAATCGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCICRSD*YKIVSH
Trigger: GTGGCTGACGATTTTGTAGCAGTCAGACCTGCAGAT...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGCAGCCGATCATGGATaGTTTCATAATCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGAADHG*FHNLQV
Trigger: GACCTGCAGATTATGAAAGCATCCATGATCGGCTGC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGTCTGCCTTAATGCTCTaGTCCTGTGTTAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: QLLEVISHLPETQTFLEWSALML*SCVSTG
Trigger: GCCAGTACTAACACAGGAGCAGAGCATTAAGGCAGA...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR GCA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGCAGTGTTTCAAGCTCTaGCTTAATGCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLLEVISHLPETQTFLEWQCFKL*LNALLL
Trigger: CAGGAGCAGAGCATTAAGGCAGAGCTTGAAACACTG...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR GCA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATAATTTCTGCTTCATATaGTTCTTCATCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHNFCFI*FFICFL
Trigger: CAGAAAGCAGATGAAGAAGCATATGAAGCAGAAATT...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTAATTTCTGCTTCATATaGTTCTTCATCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSNFCFI*FFICFL
Trigger: CAGAAAGCAGATGAAGAAGCATATGAAGCAGAAATT...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGCGTACTCCTCCGTGTaGTCTTCTAACAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGAYSSV*SSNSSL
Trigger: AAGTGAACTGTTAGAAGAGCACACGGAGGAGTACGC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAGTCAGCTGGTTACTaGCATCAGCTTCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACESAGY*HQLQMR
Trigger: TCTCATTTGAAGCTGATGGCAGTAACCAGCTGACTC...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTGCAACCGAGATAAGCTaGATCAAAGGGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCATEIS*IKGALL
Trigger: CAACAATGCCCCTTTGATGCAGCTTATCTCGGTTGC...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCCTGGAATTTGCTCACTaGCGGCTTCCTCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFLEFAH*RLPHWN
Trigger: ATTCCAGTGAGGAAGCCGGCAGTGAGCAAATTCCAG...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTTCCTCTAAGACATCATaGAGTACTTCATCAAAAATG +
Preference number: 4 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGSSKTS*STSSKM
Trigger: CATTTTTGATGAAGTACTGCATGATGTCTTAGAGGA...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCTCCTCTAAGACATCATaGAGTACTTCATCAAAAATG +
Preference number: 4 (lower is better)
Translates to: SSLECRKLAQCSPAALCLSSKTS*STSSKM
Trigger: CATTTTTGATGAAGTACTGCATGATGTCTTAGAGGA...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGCACTTTGCAGATTCTaGATTCTAGGATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSALCRF*ILGWKW
Trigger: CCACTTCCATCCTAGAATGCAGAATCTGCAAAGTGC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTCATGCGTCCCCTCATaGAAAATTCTGCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGSCVPS*KILQSL
Trigger: CAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCCAATTCTTTCTTACTaGGACTTCGTAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIPILSY*DFVSVW
Trigger: CCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTCTACCTCTTTCCCTaGCTCTGTGCCAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFYLFP*LCAKFS
Trigger: ACTGAATTTGGCACAGAGCCAGGGAAAGAGGTAGAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAAGCCAGGTGGAACCTaGGGTTTAGGCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSKPGGT*GLGLIF
Trigger: AAAAATCAAGCCTAAACCCCAGGTTCCACCTGGCTT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCATAACTGGGCCAGCTTaGCTGCCAAAACATGCTCTC +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFITGPA*LPKHAL
Trigger: GAGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTAT...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGTGTCTTGCAAGGTACTaGTCATATAACTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QLLEVISHLPETQTFLEWCLARY*SYNWAS
Trigger: GCTGGCCCAGTTATATGACCAGTACCTTGCAAGACA...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCTCCCGTTTTCTCCAATaGCCCATGCCACACTATGAG +
Preference number: 4 (lower is better)
Translates to: GTSILCTPVLYTASIKGFSRFLQ*PMPHYE
Trigger: CTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGA...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTTCTCGGTCATAGACTaGAACTTGCTTATAATTTCG +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLFSVID*NLLIIS
Trigger: CGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCTCGGTCATAGACTaGAACTTGCTTATAATTTCG +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHFSVID*NLLIIS
Trigger: CGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAA...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTCACTGACTGCAGACTaGCTGTGCTATAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTSLTAD*LCYNLH
Trigger: ATGGAGATTATAGCACAGCCAGTCTGCAGTCAGTGA...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACGTAGCCCAGAAGAACTaGGGGAATATCTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHVAQKN*GNIYFK
Trigger: TTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTAC...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAATTCTAGGATGGAAGTaGAGAGAGACGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKILGWK*RETVLL
Trigger: CAACAGCACCGTCTCTCTCCACTTCCATCCTAGAAT...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTCTGCATTCTAGGATaGAAGTGGAGAGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGFCILG*KWRETV
Trigger: CACCGTCTCTCTCCACTTCCATCCTAGAATGCAGAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTGCTGCAGCCATGTCTTaGAGCAAAAACACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCAAAMS*SKNTSL
Trigger: TAAGCTGGTGTTTTTGCTCCAAGACATGGCTGCAGC...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGGGATTCATTTTGGCTaGGATGGGTCCTTGTTAATG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSGIHFG*DGSLLM
Trigger: CATTAACAAGGACCCATCCCAGCCAAAATGAATCCC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCTTGGGGACAGCAGTTaGTGGCTTGAAAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLGDSS*WLEKIY
Trigger: GTAAATCTTTTCAAGCCACCAACTGCTGTCCCCAAG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651385.1
CDS-3UTR CCA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGTGTGAATTCAGTACTTaGGATTTCAACTCAGACGTG +
Preference number: 4 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQCEFST*DFNSDV
Trigger: CACGTCTGAGTTGAAATCCCAAGTACTGAATTCACA...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCTGTCTTCGAACCTTTaGGTTCTTATTCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLSSNL*VLILSS
Trigger: GGAAGACAGAATAAGAACTCAAAGGTTCGAAGACAG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGAGTCAACTTCTTGTTaGGTCCTTTCTACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSESTSC*VLSTSF
Trigger: GAAAGAGGTAGAAAGGACTCAACAAGAAGTTGACTC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGGAGTCAACTTCTTGTTaGGTCCTTTCTACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: INRFNQGSSYHIVGSNPEESTSC*VLSTSF
Trigger: GAAAGAGGTAGAAAGGACTCAACAAGAAGTTGACTC...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR TCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCGAGTCAACTTCTTGTTaGGTCCTTTCTACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTESTSC*VLSTSF
Trigger: GAAAGAGGTAGAAAGGACTCAACAAGAAGTTGACTC...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCATGGAACTTGACTCTTaGGTAACTTTGGGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIMELDS*VTLGVN
Trigger: GTTGACTCCCAAAGTTACTCAAGAGTCAAGTTCCAT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCAGAATCATGGAACTTaGCTCTTGAGTAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIQNHGT*LLSNFG
Trigger: CCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGCAGAATCATGGAACTTaGCTCTTGAGTAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKQNHGT*LLSNFG
Trigger: CCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTG...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTCTGCCTACTGGGTATaGAGAGCATTTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGSAYWV*RAFLFP
Trigger: TGGAAAGAGAAATGCTCTTCATACCCAGTAGGCAGA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCATTCTCCATGATGTTCTaGTTGGTGCGTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASFSMMF*LVRATS
Trigger: AGAGGTGGCACGCACCAATCAGAACATCATGGAGAA...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAGAAGAAAAGGCGTGTGTACTGTCTTCCCATGTCTaGATCCTCATCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: EQVIPNVHCTGEEEKACVLSSHV*ILIIFN
Trigger: ATTGAAAATGATGAGGATGCAGACATGGGAAGACAG...TACACACGCCTTTTCTTCTTCCCCAGTACAATGAACATTAGGAATTACCTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGAISPS*VPSWKI
Trigger: AATTTTCCATGAGGGGACGCATGAGGGAGAAATTGC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCAISPS*VPSWKI
Trigger: AATTTTCCATGAGGGGACGCATGAGGGAGAAATTGC...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACAGCAATGCACTTTCTaGTTTGGACCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASQQCTF*FGPRCL
Trigger: CAAGCAGCGAGGTCCAAAGCAGAAAGTGCATTGCTG...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCTTTCCCTGGCTCTGTaGCAAATTCAGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGLSLAL*QIQSPI
Trigger: AATTGGAGACTGAATTTGGCACAGAGCCAGGGAAAG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCTTCTTGGCCCTTTaGACTTTCCTCCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGFFLAL*TFLQAF
Trigger: GAAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAA...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCACCGGGATGTTCTTCTaGTGCTTGTTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFITGMFF*CLFPFL
Trigger: AAGAAAAGGAAACAAGCAGCAGAAGAACATCCCGGT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTACCGGGATGTTCTTCTaGTGCTTGTTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSTGMFF*CLFPFL
Trigger: AAGAAAAGGAAACAAGCAGCAGAAGAACATCCCGGT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAGAGTCAGCTGGTTACTaGCATCAGCTTCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKESAGY*HQLQMR
Trigger: TCTCATTTGAAGCTGATGGCAGTAACCAGCTGACTC...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGAAGTTAAACTCCTGTTaGAGCTGCTCCAGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKKLNSC*SCSSLK
Trigger: CTTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTT...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTCTTGGGGAAGCAGCATaGTTTTCACTGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCLGEAA*FSLNIL
Trigger: AAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAG...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAGCACTTTGCAGATTCTaGATTCTAGGATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKALCRF*ILGWKW
Trigger: CCACTTCCATCCTAGAATGCAGAATCTGCAAAGTGC...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR GCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTACAAAAGGCACTTTaGAGATTCTGCATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLLQKAL*RFCILG
Trigger: TCCTAGAATGCAGAATCTGCAAAGTGCCTTTTGTAA...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCCAATTCTTTCTTACTaGGACTTCGTAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGPILSY*DFVSVW
Trigger: CCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAATAACTGGGCCAGCTTaGCTGCCAAAACATGCTCTC +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASITGPA*LPKHAL
Trigger: GAGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTAT...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTCTGATGAGGTTTTTCTaGATCAAGGCCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGLMRFF*IKASLN
Trigger: GTTCAGACTGGCCTTGATCCAGAAAAACCTCATCAG...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGGTATTTGTAAATCTCTaGAACTCTCGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLVFVNL*NSRRDF
Trigger: GAAATCCCTTCGAGAGTTCCAGAGATTTACAAATAC...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTGATTCTCTAACCTGCTaGAGGTACTTGGCTACTATG +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCDSLTC*RYLATM
Trigger: CATAGTAGCCAAGTACCTCCAGCAGGTTAGAGAATC...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGATATATTGTGCTAAATaGCATTTTCACACATCCCAG +
Preference number: 4 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLIYCAK*HFHTSQ
Trigger: CTGGGATGTGTGAAAATGCCATTTAGCACAATATAT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGAGCAGTTCTGCTCTGTaGTCATCTTCTACATCTTCT +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKSSSAL*SSSTSS
Trigger: AGAAGATGTAGAAGATGACCACAGAGCAGAACTGCT...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp TTCCTCTTTCACGGTCATCCTCTAAGACATCATGCAGTACTTCATCAAAAATGTCAAACTTTTCTCGAATaGACTCTCCAGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: FLFHGHPLRHHAVLHQKCQTFLE*TLQEPA
Trigger: AGCTGGTTCCTGGAGAGTCCATTCGAGAAAAGTTTG...ACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAAAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR TCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAATGGAACTTGACTCTTaGGTAACTTTGGGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKMELDS*VTLGVN
Trigger: GTTGACTCCCAAAGTTACTCAAGAGTCAAGTTCCAT...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGCAGAATCATGGAACTTaGCTCTTGAGTAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEQNHGT*LLSNFG
Trigger: CCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTG...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTTGGCAAACTGTTCGTTaGAAAGAGACTTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACWQTVR*KETSTK
Trigger: CTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCA...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGCAATTCAAGCTAATTaGGGAAAGGAAAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSAIQAN*GKEKVR
Trigger: CCTAACCTTTTCCTTTCCTCAATTAGCTTGAATTGC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTGTCTTCCCATGTCTaGATCCTCATCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: INRFNQGSSYHIVGSNPELSSHV*ILIIFN
Trigger: ATTGAAAATGATGAGGATGCAGACATGGGAAGACAG...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCAGGCTTGATTTTTCGTaGAGAATCATGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIRLDFS*RIMELD
Trigger: GTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCGATGCTTTCATAATCTaGAGGTCTGACTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIDAFII*RSDCYK
Trigger: TTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATC...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGCAGCCGATCATGGATaGTTTCATAATCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASAADHG*FHNLQV
Trigger: GACCTGCAGATTATGAAAGCATCCATGATCGGCTGC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTGGCCAGTTGACTATTTaGAAATTGAAAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQYYTQRQLKASLQNKACGQLTI*KLKICP
Trigger: TGGGCAGATTTTCAATTTGCAAATAGTCAACTGGCC...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTGTTCCATCAATCCTTaGTTGGAAATATATTGTGCT +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCCSINP*LEIYCA
Trigger: AGCACAATATATTTCCAAGCAAGGATTGATGGAACA...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTTGTGCCTTGAAAATTaGTTACTTAGTGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILCLEN*LLSAGE
Trigger: TTCCCCTGCACTAAGTAAGCAATTTTCAAGGCACAA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCATATCAATGTCCAGTTaGAAATTTCCAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIISMSS*KFPGGS
Trigger: AGACCCTCCTGGAAATTTCCAACTGGACATTGATAT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGCTACTATGGCCCTATaGGTGTCTATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASATMAL*VSMCSL
Trigger: CAAGGAACACATAGACACCCATAGGGCCATAGTAGC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTATATATTGTGCTAAATaGCATTTTCACACATCCCAG +
Preference number: 4 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCIYCAK*HFHTSQ
Trigger: CTGGGATGTGTGAAAATGCCATTTAGCACAATATAT...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCATCTGCCTACTGGGTATaGAGAGCATTTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASSAYWV*RAFLFP
Trigger: TGGAAAGAGAAATGCTCTTCATACCCAGTAGGCAGA...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAACAGGGATGATGAGTaGAGATTAACCCTGAAATAT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSNRDDE*RLTLKY
Trigger: ATATTTCAGGGTTAATCTTCACTCATCATCCCTGTT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAACACCTCCTTGTTGTTaGACAGCACTTTTAAGTACA +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKTPPCC*TALLST
Trigger: TGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGT...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR TCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTTGTTCTGCCAGCTTaGAAAGGCTTAGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGFVLPA*KGLGPK
Trigger: TTTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAA...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTAACTCGGAGGCTGACTaGCTTTATTTGAATTCTCAT +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGNSEAD*LYLNSH
Trigger: ATGAGAATTCAAATAAAGTCAGTCAGCCTCCGAGTT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR TCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGCAATTCAAGCTAATTaGGGAAAGGAAAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGAIQAN*GKEKVR
Trigger: CCTAACCTTTTCCTTTCCTCAATTAGCTTGAATTGC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATT +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASAISPS*VPSWKI
Trigger: AATTTTCCATGAGGGGACGCATGAGGGAGAAATTGC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTTCCCTGGCTCTGTaGCAAATTCAGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASLSLAL*QIQSPI
Trigger: AATTGGAGACTGAATTTGGCACAGAGCCAGGGAAAG...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTAGGCTTGATTTTTCGTaGAGAATCATGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGRLDFS*RIMELD
Trigger: GTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTATATGCTTCTTCATCTaGTTTCTGGTCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSICFFI*FLVSFF
Trigger: GAAAAAGCTGACCAGAAAGCAGATGAAGAAGCATAT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCATATGCTTCTTCATCTaGTTTCTGGTCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTICFFI*FLVSFF
Trigger: GAAAAAGCTGACCAGAAAGCAGATGAAGAAGCATAT...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAGGCCAGTTGACTATTTaGAAATTGAAAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKGQLTI*KLKICP
Trigger: TGGGCAGATTTTCAATTTGCAAATAGTCAACTGGCC...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCATTCTCCAATGGCCCATaGCACACTATGAGACACTTT +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASFSNGP*HTMRHF
Trigger: AAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAA...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTGTGCCTTGAAAATTaGTTACTTAGTGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGLCLEN*LLSAGE
Trigger: TTCCCCTGCACTAAGTAAGCAATTTTCAAGGCACAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCAGGGTATGGTACTTGTaGCTTGAAAATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIRVWYL*LENCLL
Trigger: AAGTAAGCAATTTTCAAGGCACAAGTACCATACCCT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCACTTCACAGCAAATTTaGAAGAAGTATCCAAGACAC +
Preference number: 4 (lower is better)
Translates to: QLLCCLTITTIHLQSFFITSQQI*KKYPRH
Trigger: GTGTCTTGGATACTTCTTGCAAATTTGCTGTGAAGT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTTCTCGGTCATAGACTaGAACTTGCTTATAATTTCG +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTFSVID*NLLIIS
Trigger: CGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAA...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCGATTCTCTAACCTGCTaGAGGTACTTGGCTACTATG +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGDSLTC*RYLATM
Trigger: CATAGTAGCCAAGTACCTCCAGCAGGTTAGAGAATC...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp GGTCATTTTCCCTACAATGAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAAAAAGAGGTTTATTTTaGCTCACTGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: GHFPYNEQVIPNVHCTGEKRGLF*LTVLQT
Trigger: AGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTT...TTCCCCAGTACAATGAACATTAGGAATTACCTGCTCATTGTAGGGAAAATGACC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000515124.6
3UTR CAA 72 bp GTGTATGATTCAGTGGCATTACATACAATTACTATGTaGTCTAACCATCACCACTATCCACCTTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VYDSVALHTITM*SNHHHYPPSEL
Trigger: AAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTGTATGTAATGCCACTGAATCATACAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCAATTTCTGCTTCATATaGTTCTTCATCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QLKASLQNKACEEEIQRTNFCFI*FFICFL
Trigger: CAGAAAGCAGATGAAGAAGCATATGAAGCAGAAATT...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGAATTTCTGCTTCATATaGTTCTTCATCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKNFCFI*FFICFL
Trigger: CAGAAAGCAGATGAAGAAGCATATGAAGCAGAAATT...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR GCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTCAGCTTGAATTTCTaGTTCATATGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFSLNF*FICFFI
Trigger: GATGAAGAAGCATATGAAGCAGAAATTCAAGCTGAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCAAGTTAAACTCCTGTTaGAGCTGCTCCAGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGKLNSC*SCSSLK
Trigger: CTTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTT...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTACAAAAGGCACTTTaGAGATTCTGCATTCTAGGA +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGLQKAL*RFCILG
Trigger: TCCTAGAATGCAGAATCTGCAAAGTGCCTTTTGTAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CCA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAGTAGCCCAGAAGAACTaGGGGAATATCTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKVAQKN*GNIYFK
Trigger: TTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTAC...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCAGCAGTTCTGCTCTGTaGTCATCTTCTACATCTTCT +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGSSSAL*SSSTSS
Trigger: AGAAGATGTAGAAGATGACCACAGAGCAGAACTGCT...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGCAGACAAAACATTTTTaGGGTATGGGTGTATGTATA +
Preference number: 4 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKQTKHF*GMGVCI
Trigger: TATACATACACCCATACCCCAAAAATGTTTTGTCTG...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CCA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTCTCATTTTTCACGTTaGGATATTGAAGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSSHFSR*DIEDSS
Trigger: ACTGGAATCTTCAATATCCCAACGTGAAAAATGAGA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
3UTR CAA 72 bp AGATTAGAACCACATTTTTCCAATCTAAGAGTCTACTaGCTTCCAAAGGCCTCTAGTTTCCAACAGTTACTT +
Preference number: 4 (lower is better)
Translates to: RLEPHFSNLRVY*LPKASSFQQLL
Trigger: AAGTAACTGTTGGAAACTAGAGGCCTTTGGAAGCAAGTAGACTCTTAGATTGGAAAAATGTGGTTCTAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR TCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCACACCTCCTTGTTGTTaGACAGCACTTTTAAGTACA +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGTPPCC*TALLST
Trigger: TGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGT...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR TCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTCTTGGCTTCTAAGATaGAGAAGCCTAAATCGTTTG +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGSWLLR*RSLNRL
Trigger: CAAACGATTTAGGCTTCTTCATCTTAGAAGCCAAGA...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTAATTTCTGCTTCATATaGTTCTTCATCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGNFCFI*FFICFL
Trigger: CAGAAAGCAGATGAAGAAGCATATGAAGCAGAAATT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR GCA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGTTCAGCTTGAATTTCTaGTTCATATGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: HIQLETSQLLEVISHLPEFSLNF*FICFFI
Trigger: GATGAAGAAGCATATGAAGCAGAAATTCAAGCTGAA...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR GCA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTCAGCTTGAATTTCTaGTTCATATGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGFSLNF*FICFFI
Trigger: GATGAAGAAGCATATGAAGCAGAAATTCAAGCTGAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CCA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGTATTTGTAAATCTCTaGAACTCTCGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASVFVNL*NSRRDF
Trigger: GAAATCCCTTCGAGAGTTCCAGAGATTTACAAATAC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR GCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTGTTCCATCAATCCTTaGTTGGAAATATATTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGCSINP*LEIYCA
Trigger: AGCACAATATATTTCCAAGCAAGGATTGATGGAACA...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CCA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCCAGACAAAACATTTTTaGGGTATGGGTGTATGTATA +
Preference number: 4 (lower is better)
Translates to: LGTSILCTPVLYTASIKGQTKHF*GMGVCI
Trigger: TATACATACACCCATACCCCAAAAATGTTTTGTCTG...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp ACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: TVILRRRVLGSSCTGSWGLRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...CCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CAA 90 bp CCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGTCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: PWASPDCHTQEAGLGLLLSDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...CAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS GCA 90 bp TCCCAGCCTAGGAGGGGAACTCCTGCGGAGAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAAGGAGTTGGCTTCTGCCTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: SQPRRGTPAERWGRI*QQAREKGVGFCLKD
Trigger: GTCTTTGAGGCAGAAGCCAACTCCTTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGTTCCCCTCCTAGGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506643.5
ENST00000674945.1
CDS CCA 90 bp TCTCTCCCTCACCTCCTGCTCTATCACTGCCCGATCAGTGGGCTCTaGAGGGCTGGGCTTCACAAGGTCCTCCTCGGGATACGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SLPHLLLYHCPISGL*RAGLHKVLLGIRLC
Trigger: GCAGAGCCGTATCCCGAGGAGGACCTTGTGAAGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGATAGAGCAGGAGGTGAGGGAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp TCCCAGCCTAGGAGGGGAACTCCTGCGGAGAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAAGGAGTTGGCTTCTGCCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SQPRRGTPAERWGRI*QQAREKGVGFCLFL
Trigger: AAGAAACAGGCAGAAGCCAACTCCTTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGTTCCCCTCCTAGGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS GCA 90 bp CTCACCAAGCACATGCACCAGCTCTCTGCCCACCAGCTGTGGTGCTaGAACCAGGTTTCCTCGTCCACCCCAGAAGCTTGTGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LTKHMHQLSAHQLWC*NQVSSSTPEACGWG
Trigger: ACCCCACCCACAAGCTTCTGGGGTGGACGAGGAAACCTGGTTGCAGCACCACAGCTGGTGGGCAGAGAGCTGGTGCATGTGCTTGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: LPASSLECRKLAQCSPAALRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS GCA 90 bp ACTCTCACCAAGCACATGCACCAGCTCTCTGCCCACCAGCTGTGGTaGTGCAACCAGGTTTCCTCGTCCACCCCAGAAGCTTGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TLTKHMHQLSAHQLW*CNQVSSSTPEACGW
Trigger: CCACCCACAAGCTTCTGGGGTGGACGAGGAAACCTGGTTGCAGCACCACAGCTGGTGGGCAGAGAGCTGGTGCATGTGCTTGGTGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp TTGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGGATTTTTCGGACACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: LGSSCTGSWGLPRWDFSDTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...GTCCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CAA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPLRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS GCA 90 bp TCCCAGCCTAGGAGGGGAACTCCTGCGGAGAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAAGGAGTTGGCTTCTGTTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SQPRRGTPAERWGRI*QQAREKGVGFCFFL
Trigger: AAGAAAGAAACAGAAGCCAACTCCTTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGTTCCCCTCCTAGGCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503658.2
CDS CCA 90 bp TCACCTCCTGCTCTATCACTGCCCGATCAGTGGGCTCTGGAGGGCTaGGCTTCACAAGGTCCTCCTCGGGATACGGCTCTGCAATCTCAT +
Preference number: 5 (lower is better)
Translates to: SPPALSLPDQWALEG*ASQGPPRDTALQSH
Trigger: ATGAGATTGCAGAGCCGTATCCCGAGGAGGACCTTGTGAAGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGATAGAGCAGGAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 90 bp TACACTCTCACCAAGCACATGCACCAGCTCTCTGCCCACCAGCTGTaGTGCTGCAACCAGGTTTCCTCGTCCACCCCAGAAGCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: YTLTKHMHQLSAHQL*CCNQVSSSTPEACG
Trigger: CCCACAAGCTTCTGGGGTGGACGAGGAAACCTGGTTGCAGCACCACAGCTGGTGGGCAGAGAGCTGGTGCATGTGCTTGGTGAGAGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp CCTGGCCGAGGGGGTAGTCAGCATTGTGGGTTGGGCTGTACGTGCTTGGGGAAGTGGAAGTTGAAGGAATaGGAGGTAAGCTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: PGRGGSQHCGLGCTCLGKWKLKE*EVSSVG
Trigger: GCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCA...CTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS GCA 90 bp TTTCCTGCTGTTCTACACTCTCACCAAGCACATGCACCAGCTCTCTaGCCACCAGCTGTGGTGCTGCAACCAGGTTTCCTCGTCCACCCC +
Preference number: 5 (lower is better)
Translates to: FPAVLHSHQAHAPAL*PPAVVLQPGFLVHP
Trigger: GGGGTGGACGAGGAAACCTGGTTGCAGCACCACAGCTGGTGGGCAGAGAGCTGGTGCATGTGCTTGGTGAGAGTGTAGAACAGCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp ATTCTGGGGCTATACTTTGAGAACCATGGCTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCAGGCTTAGCTCCGGGACCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: ILGLYFENHGWGTGH*VLRFLPGLAPGPAW
Trigger: CCACGCTGGTCCCGGAGCTAAGCCTGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAGCCATGGTTCTCAAAGTATAGCCCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS CCA 90 bp TCCTGCAGAGGGAATGCCTCCCTGCATCTTCCTTGTCTGCCTAGTTaGTTGCAGTTTTACCCATCCCTTGGGGCCAGTGTCCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: SCRGNASLHLPCLPS*LQFYPSLGASVHLP
Trigger: GGGGAGGTGGACACTGGCCCCAAGGGATGGGTAAAACTGCAACCAACTAGGCAGACAAGGAAGATGCAGGGAGGCATTCCCTCTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp GTGCCTGGCCTGCCCAGGCTCTTTTTAACAACCAGCTCTCTCCGTGGGCCTCTCTCCCTGGGATTCATTTaGGCTGGGATGGGTCCCTTA +
Preference number: 5 (lower is better)
Translates to: VPGLPRLFLTTSSLRGPLSLGFI*AGMGPL
Trigger: TAAGGGACCCATCCCAGCCAAAATGAATCCCAGGGA...GAGAGGCCCACGGAGAGAGCTGGTTGTTAAAAAGAGCCTGGGCAGGCCAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CAA 90 bp ACTGTCATACTCAGGAGGCGGGTCTTGGGCTCCTCCTGCACAGGCTCCTGGGGGACAGCAGTTGGTGGCTaGAAAAGATTTACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: TVILRRRVLGSSCTGSWGTAVGG*KRFTLH
Trigger: GTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTGT...CCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CAA 90 bp GCTCTCTCCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTTGGGCTCTGCCTGTTTCTTTCTaGGCTGTCTTCGAACCTTTG +
Preference number: 5 (lower is better)
Translates to: ALSVGLSGLSYSGGGSWALPVSF*AVFEPL
Trigger: CAAAGGTTCGAAGACAGCCAAGAAAGAAACAGGCAG...AGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGGAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CAA 90 bp CTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAGCACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: LMSEGEGETGVSHGERGSTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...GCTCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CAA 90 bp ACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: TQSYREPCEFSTWDFNSDLRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...GTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGAGTCAGCATTGTGGGTaGGGCTGTACGTGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQSQHCG*GCTCLG
Trigger: CCCCAAGCACGTACAGCCCAACCCACAATGCTGACT...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGGATTTTTCGGACCTCGGGAGAAAGGAGTaGGCTTCTGCCTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LGSSCTGSWGLPRWDFSDLGRKE*ASACFF
Trigger: AAAGAAACAGGCAGAAGCCAACTCCTTTCTCCCGAG...GTCCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS TCA 90 bp TCAATGCTTCCTCCCTCCCCTGGAGGTAAGTCCTCCCTGAGACTTTaGTGTCTCCATAGCAGTCAGCATGGGAGCACCATGTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SMLPPSPGGKSSLRL*CLHSSQHGSTMSAR
Trigger: CCTGGCTGACATGGTGCTCCCATGCTGACTGCTATGGAGACATCAAAGTCTCAGGGAGGACTTACCTCCAGGGGAGGGAGGAAGCATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCATCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPSDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLLRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGTGGAAGTTGAAGGAATaGGAGGTAAGCTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLWKLKE*EVSSVG
Trigger: GCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCA...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGTTTGGACCTCGCTGCTaGCAATTTCTCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLFGPRC*QFLPHA
Trigger: CGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAA...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGCCGCAGTGGTCGCTTTaGTTCTGCCAGCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLPQWSL*FCQLEK
Trigger: CTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGG...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTAGTCAGCATTGTGGGTaGGGCTGTACGTGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPSQHCG*GCTCLG
Trigger: CCCCAAGCACGTACAGCCCAACCCACAATGCTGACT...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCCTCAGGAATAGCATaGCCCATCAACAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPPSGIA*PINSQA
Trigger: GGCCTGGCTGTTGATGGGCAATGCTATTCCTGAGGG...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS TCA 90 bp TGCTCTGCTCCTGTGTTAGTACTGGCGGCCTTGAAGGAAATGGCTTaGTGGGGTTTGGCAGAGCTAGGATCCTGCCGTCATCTCCAAACC +
Preference number: 5 (lower is better)
Translates to: CSAPVLVLAALKEMA*WGLAELGSCRHLQT
Trigger: GGTTTGGAGATGACGGCAGGATCCTAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAAGGCCGCCAGTACTAACACAGGAGCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp CTCTGGAGGGCTGGGCTTCACAAGGTCCTCCTCGGGATACGGCTCTaGAATCTCATCACCGGGATGTTCTTCTGCTGCTTGTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LWRAGLHKVLLGIRL*NLITGMFFCCLFPF
Trigger: AAAAGGAAACAAGCAGCAGAAGAACATCCCGGTGATGAGATTGCAGAGCCGTATCCCGAGGAGGACCTTGTGAAGCCCAGCCCTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp CATTCTCCTGGTGGTGGCAGGTTTCTCCTCAGCCACTTTCTTTCTTaGAGGGACATCAGCTTTTTCCTCCTAGCCCTCCACCCACACCTC +
Preference number: 5 (lower is better)
Translates to: HSPGGGRFLLSHFLS*RDISFFLLALHPHL
Trigger: GAGGTGTGGGTGGAGGGCTAGGAGGAAAAAGCTGATGTCCCTGCAAGAAAGAAAGTGGCTGAGGAGAAACCTGCCACCACCAGGAGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS GCA 90 bp ACATGCCTATGGTCTCCCATCCTTCACATTTGCTTGGGCCAGTCCTaGAGAGGGAATGCCTCCCTGCATCTTCCTTGTCTGCCTAGTTGG +
Preference number: 5 (lower is better)
Translates to: TCLWSPILHICLGQS*RGNASLHLPCLPSW
Trigger: CCAACTAGGCAGACAAGGAAGATGCAGGGAGGCATTCCCTCTGCAGGACTGGCCCAAGCAAATGTGAAGGATGGGAGACCATAGGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 90 bp CCACCAGTTCCTCAAACATGCCTATGGTCTCCCATCCTTCACATTTaGTTGGGCCAGTCCTGCAGAGGGAATGCCTCCCTGCATCTTCCT +
Preference number: 5 (lower is better)
Translates to: PPVPQTCLWSPILHI*LGQSCRGNASLHLP
Trigger: AGGAAGATGCAGGGAGGCATTCCCTCTGCAGGACTGGCCCAAGCAAATGTGAAGGATGGGAGACCATAGGCATGTTTGAGGAACTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGTATAACTGGGCCAGCTaGGCTGCCAAAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLYNWAS*AAKTCS
Trigger: AGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATA...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCTTCTTCTTGGCCCTTaGCACTTTCCTCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQLLLGP*HFPPGL
Trigger: AAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAAG...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGCTGGGGCACTGGTCATaGGGTGTTACGCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: FIPARVWSFSRSRMANCSLGHWS*GVTLPA
Trigger: GGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAG...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGGACGGCTGCTGGAATTaGCTCACTGCCGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: FIPARVWSFSRSRMANCSDGCWN*LTAGFL
Trigger: GAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTC...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCTGGGGTTTCGCCATGTaGGCCAGGCTAGTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: VLGEAACFSLNILEDLDGWGFAM*ARLVSN
Trigger: GTTTGACACTAGCCTGGCCAACATGGCGAAACCCCA...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS GCA 90 bp TTACTGGGACTTCGTAAGCGTCTGGGCCGAGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCTTTGGACCTCGCTGCTTGCAATTTC +
Preference number: 5 (lower is better)
Translates to: LLGLRKRLGRGVGIS*SNALSALDLAACNF
Trigger: GAAATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTCCCAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp TCCTTCACATTTGCTTGGGCCAGTCCTGCAGAGGGAATGCCTCCCTaGATCTTCCTTGTCTGCCTAGTTGGTTGCAGTTTTACCCATCCC +
Preference number: 5 (lower is better)
Translates to: SFTFAWASPAEGMPP*IFLVCLVGCSFTHP
Trigger: GGGATGGGTAAAACTGCAACCAACTAGGCAGACAAGGAAGATGCAGGGAGGCATTCCCTCTGCAGGACTGGCCCAAGCAAATGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp TCTCCCTCATGCGTCCCCTCATGGAAAATTCTGCAAAGCCTGTTCTaGAAGTTGAAGGAATTGGAGGTAAGCTCCGTGGGCCTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: SPSCVPSWKILQSLF*KLKELEVSSVGLSG
Trigger: TCCGGAGAGGCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 90 bp CCAATTCTTTCTTACTGGGACTTCGTAAGCGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATGCACTTTCTGCTTTGGACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PILSYWDFVSVWAEE*GFPAAMHFLLWTSL
Trigger: CAGCGAGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 90 bp CAGCAATCTGTTCTCCATGATGTTCTGATTGGTGCGTGCCACCTCTaGTCTTACCCCGGTGTAAAGGCCTTCATCTTCCAGGAACCTGGG +
Preference number: 5 (lower is better)
Translates to: QQSVLHDVLIGACHL*SYPGVKAFIFQEPG
Trigger: CCCAGGTTCCTGGAAGATGAAGGCCTTTACACCGGGGTAAGACCAGAGGTGGCACGCACCAATCAGAACATCATGGAGAACAGATTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 90 bp CAGTTCCTCAAACATGCCTATGGTCTCCCATCCTTCACATTTGCTTaGGCCAGTCCTGCAGAGGGAATGCCTCCCTGCATCTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: QFLKHAYGLPSFTFA*ASPAEGMPPCIFLV
Trigger: GACAAGGAAGATGCAGGGAGGCATTCCCTCTGCAGGACTGGCCCAAGCAAATGTGAAGGATGGGAGACCATAGGCATGTTTGAGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGATCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LSLMSEGEGETGVSHGERSDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CAA 90 bp TTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGTCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: FHLCQKGKGKQVCRMVRESDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...CTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511544.6
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CAA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCATGGAAGTTGAAGGAATaGGAGGTAAGCTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPWKLKE*EVSSVG
Trigger: GCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCA...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGAGCCTGTTCTGGAAGTaGAAGGAATTGGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLSLFWK*KELEVS
Trigger: GCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCT...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTTTTGGACCTCGCTGCTaGCAATTTCTCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPFGPRC*QFLPHA
Trigger: CGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAA...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCACCCTTCCTCCTCCTCTaGATTAGTTCCCGCTCTATG +
Preference number: 5 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPPFLLL*ISSRSM
Trigger: CATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGG...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTGGGGCACTGGTCATaGGGTGTTACGCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLGHWS*GVTLPA
Trigger: GGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGGTCCTGGACACCTCCTaGTTGTTGAACAGCACTTTT +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLVLDTS*LLNSTF
Trigger: AAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGAC...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCCATTGTTGGGGTCATTaGGGTCGAGCTTGGACTCTG +
Preference number: 5 (lower is better)
Translates to: VLGEAACFSLNILEDLDGHCWGH*GRAWTL
Trigger: CAGAGTCCAAGCTCGACCCAAATGACCCCAACAATG...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTTGCATCAAAGGGGCATaGTTGGGGTCATTTGGGTCG +
Preference number: 5 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPCIKGA*LGSFGS
Trigger: CGACCCAAATGACCCCAACAATGCCCCTTTGATGCA...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTCCCTGGGATTCATTTaGGCTGGGATGGGTCCCTTA +
Preference number: 5 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPSLGFI*AGMGPL
Trigger: TAAGGGACCCATCCCAGCCAAAATGAATCCCAGGGA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS TCA 90 bp CAAACCATCTTCTTTCGGGGTCCTGCATCAGCAATCTGTTCTCCATaGTGTTCTGATTGGTGCGTGCCACCTCTGGTCTTACCCCGGTGT +
Preference number: 5 (lower is better)
Translates to: QTIFFRGPASAICSP*CSDWCVPPLVLPRC
Trigger: ACACCGGGGTAAGACCAGAGGTGGCACGCACCAATCAGAACATCATGGAGAACAGATTGCTGATGCAGGACCCCGAAAGAAGATGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS TCA 90 bp AAGGGCACTCCACTTCCAACTCCCTCGTGGTCCAGTGTCACATGCTaGTTACTGCTAAACTCCACTTCTTCAGTAGGAGCCCTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: KGTPLPTPSWSSVTC*LLLNSTSSVGALPV
Trigger: CACTGGAAGGGCTCCTACTGAAGAAGTGGAGTTTAGCAGTAATCAGCATGTGACACTGGACCACGAGGGAGTTGGAAGTGGAGTGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS TCA 90 bp CAAGTCCTCAGTGATGCTGATGCTGCTGATTCTGGGGCTATACTTTaGGAACCATGGCTGGGGCACTGGTCATTGGGTGTTACGCTTCCT +
Preference number: 5 (lower is better)
Translates to: QVLSDADAADSGAIL*EPWLGHWSLGVTLP
Trigger: AGGAAGCGTAACACCCAATGACCAGTGCCCCAGCCATGGTTCTCAAAGTATAGCCCCAGAATCAGCAGCATCAGCATCACTGAGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS GCA 90 bp GTCCTGCATCAGCAATCTGTTCTCCATGATGTTCTGATTGGTGCGTaGCACCTCTGGTCTTACCCCGGTGTAAAGGCCTTCATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VLHQQSVLHDVLIGA*HLWSYPGVKAFIFQ
Trigger: CTGGAAGATGAAGGCCTTTACACCGGGGTAAGACCAGAGGTGGCACGCACCAATCAGAACATCATGGAGAACAGATTGCTGATGCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp CCAGCTTTGCAGAGCTGGCCACAGGCTATAATGCACATGGTTCTCTaGTTCCTTCCTGAGGATCAGAGCTGGCTAAGTGACCTCTTGACT +
Preference number: 5 (lower is better)
Translates to: PALQSWPQAIMHMVL*FLPEDQSWLSDLLT
Trigger: AGTCAAGAGGTCACTTAGCCAGCTCTGATCCTCAGGAAGGAAGCAGAGAACCATGTGCATTATAGCCTGTGGCCAGCTCTGCAAAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 90 bp TTCCTGCCTTATCTCTACCTTGCTCACCCACCAGTTCCTCAAACATaGCTATGGTCTCCCATCCTTCACATTTGCTTGGGCCAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: FLPYLYLAHPPVPQT*LWSPILHICLGQSC
Trigger: GCAGGACTGGCCCAAGCAAATGTGAAGGATGGGAGACCATAGGCATGTTTGAGGAACTGGTGGGTGAGCAAGGTAGAGATAAGGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp GCTATAATGCACATGGTTCTCTGCTTCCTTCCTGAGGATCAGAGCTaGCTAAGTGACCTCTTGACTGGAGCCCCTCTTTGCAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: AIMHMVLCFLPEDQS*LSDLLTGAPLCKRH
Trigger: GTGCCTCTTGCAAAGAGGGGCTCCAGTCAAGAGGTCACTTAGCCAGCTCTGATCCTCAGGAAGGAAGCAGAGAACCATGTGCATTATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp CAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGGGAGCCATGCCTTGGGGACAGCAGTaGGTGGCTGTTTCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QGSSYHIVGSNPELQGAMPWGQQ*VAVSFL
Trigger: CAAGAAAGAAACAGCCACCAACTGCTGTCCCCAAGG...CATGGCTCCCTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp GGTCTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: GLTQSYREPCEFSTWDFNSDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...GTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGTGCATCAAAGGGGCATaGTTGGGGTCATTTGGGTCG +
Preference number: 5 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPCIKGA*LGSFGS
Trigger: CGACCCAAATGACCCCAACAATGCCCCTTTGATGCA...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTAGTCAGCATTGTGGGTaGGGCTGTACGTGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTSQHCG*GCTCLG
Trigger: CCCCAAGCACGTACAGCCCAACCCACAATGCTGACT...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS TCA 90 bp CTCTCCGGCCAGTTGACTATTTGCAAATTGAAAATCTGCCCAAAGTaGACTCGGAAGTCTGCTCCTAGTGGCCGACTGACTGTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSGQLTICKLKICPK*TRKSAPSGRLTVLD
Trigger: GTCCAGGACAGTCAGTCGGCCACTAGGAGCAGACTTCCGAGTTCACTTTGGGCAGATTTTCAATTTGCAAATAGTCAACTGGCCGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS TCA 90 bp CTCAGCTACTCCAGCTGGAAGGGTTACTCTCTCTTCCAAACCTCTTaGGCTCCTATTAGCCTGCTCCCTTCACATGACAGTGGGTGTGTA +
Preference number: 5 (lower is better)
Translates to: LSYSSWKGYSLFQTS*APISLLPSHDSGCV
Trigger: TACACACCCACTGTCATGTGAAGGGAGCAGGCTAATAGGAGCTCAAGAGGTTTGGAAGAGAGAGTAACCCTTCCAGCTGGAGTAGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 90 bp AGAAGCCATGCTCTGGCCCTTACATTTCCTGCCTTATCTCTACCTTaGTCACCCACCAGTTCCTCAAACATGCCTATGGTCTCCCATCCT +
Preference number: 5 (lower is better)
Translates to: RSHALALTFPALSLP*SPTSSSNMPMVSHP
Trigger: AGGATGGGAGACCATAGGCATGTTTGAGGAACTGGTGGGTGAGCAAGGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGCATGGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp ACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTaGAGTGTCATTCTCCTGGTGGTGGCAGGTTTCTCCTCAGCCACT +
Preference number: 5 (lower is better)
Translates to: TGSHVNSVLGISTQT*SVILLVVAGFSSAT
Trigger: AGTGGCTGAGGAGAAACCTGCCACCACCAGGAGAATGACACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTGTGGCTGTTTCTTTCTaGGCTGTCTTCGAACCTTTG +
Preference number: 5 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPVAVSF*AVFEPL
Trigger: CAAAGGTTCGAAGACAGCCAAGAAAGAAACAGCCAC...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHSDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CTGCCGGCTTCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTCCTTTTCTTCTTCTaGGCCCTTTGCACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPASSLECRKLAQCSPAAFLFFF*ALCTFL
Trigger: GAGGAAAGTGCAAAGGGCCAAGAAGAAGAAAAGGAA...AGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGGACACCTCCTTGTTGTaGAACAGCACTTTTAAGTAC +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLDTSLL*NSTFKY
Trigger: GTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTC...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTTCATTTGGGTCGAGCTaGGACTCTGCTGCCCACTTG +
Preference number: 5 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGSFGSS*DSAAHL
Trigger: CAAGTGGGCAGCAGAGTCCAAGCTCGACCCAAATGA...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTCATTCCAGCTAGGGTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGATCAAAGGGGCATTGTaGGGGTCATTTGGGTCGAGC +
Preference number: 5 (lower is better)
Translates to: FIPARVWSFSRSRMANCSIKGAL*GSFGSS
Trigger: GCTCGACCCAAATGACCCCAACAATGCCCCTTTGAT...CGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGTTTTGTTCTGCCAGCTaGAAAAGGCTTAGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQFCSAS*KRLRPK
Trigger: TTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAA...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCCCCTCAGGAATAGCATaGCCCATCAACAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFPSGIA*PINSQA
Trigger: GGCCTGGCTGTTGATGGGCAATGCTATTCCTGAGGG...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS TCA 90 bp AAACTAGGGGGCCTCAGAGACAGAACTTTGTTAGAGGTCCTAACATaGCAACACTCTTCCATTGTCAATGCTTCCTCCCTCCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: KLGGLRDRTLLEVLT*QHSSIVNASSLPWR
Trigger: CCTCCAGGGGAGGGAGGAAGCATTGACAATGGAAGAGTGTTGTCATGTTAGGACCTCTAACAAAGTTCTGTCTCTGAGGCCCCCTAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 90 bp CACTATGAGACACTTTCCCTGAGGTCATCAGAGTCAGCTGGTTACTaGCATCAGCTTCAAATGAGAAGGGCACTCCACTTCCAACTCCCT +
Preference number: 5 (lower is better)
Translates to: HYETLSLRSSESAGY*HQLQMRRALHFQLP
Trigger: AGGGAGTTGGAAGTGGAGTGCCCTTCTCATTTGAAGCTGATGGCAGTAACCAGCTGACTCTGATGACCTCAGGGAAAGTGTCTCATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS GCA 90 bp TGCTTATCCAAGGAAGAGAAGCCATGCTCTGGCCCTTACATTTCCTaGCTTATCTCTACCTTGCTCACCCACCAGTTCCTCAAACATGCC +
Preference number: 5 (lower is better)
Translates to: CLSKEEKPCSGPYIS*LISTLLTHQFLKHA
Trigger: GGCATGTTTGAGGAACTGGTGGGTGAGCAAGGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGCATGGCTTCTCTTCCTTGGATAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp CAGTACTTGGGATTTCAACTCAGACGTGGAGTGTCATTCTCCTGGTaGTGGCAGGTTTCTCCTCAGCCACTTTCTTTCTTGCAGGGACAT +
Preference number: 5 (lower is better)
Translates to: QYLGFQLRRGVSFSW*WQVSPQPLSFLQGH
Trigger: ATGTCCCTGCAAGAAAGAAAGTGGCTGAGGAGAAACCTGCCACCACCAGGAGAATGACACTCCACGTCTGAGTTGAAATCCCAAGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCCTTGGGGACAGCAGTaGGTGGCTGTTTCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHPWGQQ*VAVSFL
Trigger: CAAGAAAGAAACAGCCACCAACTGCTGTCCCCAAGG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CAA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp TATAAAGAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCCTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: YKEKRFILAHCSADCAISLRRRV*GSSCTG
Trigger: GCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAG...GCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTCTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515124.6
ENST00000652443.1
CDS-3UTR CAA 90 bp CAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGTTTGGACCTCGCTGCTaGCAATTTCTCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: QRSQIPPNETVSGKKGIKFGPRC*QFLPHA
Trigger: CGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAA...CTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTCCCTTCCTCCTCCTCTaGATTAGTTCCCGCTCTATG +
Preference number: 5 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTPFLLL*ISSRSM
Trigger: CATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGG...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGCTCATTGATGGTTTTTaGGATGGTATCGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQLIDGF*DGIERL
Trigger: CAGTCTCTCGATACCATCCAAAAAACCATCAATGAG...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATCTTCTTCTTGGCCCTTaGCACTTTCCTCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHLLLGP*HFPPGL
Trigger: AAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAAG...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTCTTCTTCTTGGCCCTTaGCACTTTCCTCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTLLLGP*HFPPGL
Trigger: AAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAAG...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTTCCTTTTCTTCTTCTaGGCCCTTTGCACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPFLFFF*ALCTFL
Trigger: GAGGAAAGTGCAAAGGGCCAAGAAGAAGAAAAGGAA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCCTTGAAGACCTCGACGGCTGCTGGAATTTGCTCACTGCCGGCTTCCTCACTGAAACTCTCCGGCCAGTaGACTATTTGCAAATTGAAA +
Preference number: 5 (lower is better)
Translates to: SLKTSTAAGICSLPASSLKLSGQ*TICKLK
Trigger: TTTCAATTTGCAAATAGTCAACTGGCCGGAGAGTTT...CAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTCATTTGGGTCGAGCTaGGACTCTGCTGCCCACTTG +
Preference number: 5 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFSFGSS*DSAAHL
Trigger: CAAGTGGGCAGCAGAGTCCAAGCTCGACCCAAATGA...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGACACATATCGAGACCTGCTGGAGGTACTaGGCTACTATGGCCCTATGG +
Preference number: 5 (lower is better)
Translates to: YHQMRQCQARRESRTHIETCWRY*ATMALW
Trigger: CCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGGT...CTCGATATGTGTCCTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTCCGACCTTTTCTCCTaGGCCGCAGTGGTCGCTTTT +
Preference number: 5 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLSDLFS*AAVVAF
Trigger: AAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGGA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp AGGAACCAGCTGGGGCTCAATGGTAATAAAGAGGGTAATGTAGGAGCCTTCACTTTGGGCTGTACGTGCTaGGGGAAGCAGCATGCTTTT +
Preference number: 5 (lower is better)
Translates to: RNQLGLNGNKEGNVGAFTLGCTC*GKQHAF
Trigger: AAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAA...AGTGAAGGCTCCTACATTACCCTCTTTATTACCATTGAGCCCCAGCTGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GGGTTGCCAAGGTGGGATTTTTCGGACACCATTTCCTTGGGGACAGCAGTTGGTAGAGAGACGGTGCTGTaGAATCTTTTAAAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: GLPRWDFSDTISLGTAVGRETVL*NLLKGS
Trigger: GGACCCTTTTAAAAGATTCAACAGCACCGTCTCTCT...ACCAACTGCTGTCCCCAAGGAAATGGTGTCCGAAAAATCCCACCTTGGCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000511544.6
CDS-3UTR CAA 90 bp CACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGGGAAGAGAGACGGTGCTGTaGAATCTTTTAAAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: HLCQKGKGKQVCRMVREGRETVL*NLLKGS
Trigger: GGACCCTTTTAAAAGATTCAACAGCACCGTCTCTCT...TCCCTCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR CAA 90 bp AGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGTCCCTGGGATTCATTTaGGCTGGGATGGGTCCCTTA +
Preference number: 5 (lower is better)
Translates to: RATGSHVNSVLGISTQTWSLGFI*AGMGPL
Trigger: TAAGGGACCCATCCCAGCCAAAATGAATCCCAGGGA...CCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTCCCTGGGATTCATTTaGGCTGGGATGGGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHSLGFI*AGMGPC
Trigger: ACAAGGACCCATCCCAGCCAAAATGAATCCCAGGGA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CAA 90 bp GTGACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTTCCATAGCTTGGGCATaGTCAGGACCTATTAAACAG +
Preference number: 5 (lower is better)
Translates to: VTQSRGTIPIPPSQMAWPSIAWA*SGPIKQ
Trigger: CTGTTTAATAGGTCCTGACAATGCCCAAGCTATGGA...AGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634028.2
CDS TCA 90 bp GGAATTAAAGGTATCCCGTTTTCTCCAATGGCCCATGCCACACTATaGGACACTTTCCCTGAGGTCATCAGAGTCAGCTGGTTACTGCCA +
Preference number: 5 (lower is better)
Translates to: GIKGIPFSPMAHATL*DTFPEVIRVSWLLP
Trigger: TGGCAGTAACCAGCTGACTCTGATGACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGATACCTTTAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS GCA 90 bp ATGCACTTTCTGCTTTGGACCTCGCTGCTTGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATTCTGCAAAGCCTGTTCTGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: MHFLLWTSLLAISPS*VPSWKILQSLFWKL
Trigger: CAACTTCCAGAACAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp CTCCTATTAGCCTGCTCCCTTCACATGACAGTGGGTGTGTACAGCTaGTTAGGCAGTTCCTGGGTTATCTCTTTCACTCTGGAGTTAGAA +
Preference number: 5 (lower is better)
Translates to: LLLACSLHMTVGVYS*LGSSWVISFTLELE
Trigger: TTCTAACTCCAGAGTGAAAGAGATAACCCAGGAACTGCCTAAGCAGCTGTACACACCCACTGTCATGTGAAGGGAGCAGGCTAATAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp CTTTGGACCTCGCTGCTTGCAATTTCTCCCTCATGCGTCCCCTCATaGAAAATTCTGCAAAGCCTGTTCTGGAAGTTGAAGGAATTGGAG +
Preference number: 5 (lower is better)
Translates to: LWTSLLAISPSCVPS*KILQSLFWKLKELE
Trigger: CTCCAATTCCTTCAACTTCCAGAACAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 90 bp CAAATTCAGTCTCCAATTCTTTCTTACTGGGACTTCGTAAGCGTCTaGGCCGAGGAGTGGGGATTTCCTGCAGCAATGCACTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: QIQSPILSYWDFVSV*AEEWGFPAAMHFLL
Trigger: AAGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGGAGACTGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 90 bp ATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTGTCATTCTCCTaGTGGTGGCAGGTTTCTCCTCAGCCACTTTCTTTCTTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: IQYLGFQLRRGVSFS*WWQVSPQPLSFLQG
Trigger: TCCCTGCAAGAAAGAAAGTGGCTGAGGAGAAACCTGCCACCACCAGGAGAATGACACTCCACGTCTGAGTTGAAATCCCAAGTACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS CCA 90 bp TCCCTTCACATGACAGTGGGTGTGTACAGCTGCTTAGGCAGTTCCTaGGTTATCTCTTTCACTCTGGAGTTAGAACTGGGTGTGAATCCT +
Preference number: 5 (lower is better)
Translates to: SLHMTVGVYSCLGSS*VISFTLELELGVNP
Trigger: AGGATTCACACCCAGTTCTAACTCCAGAGTGAAAGAGATAACCCAGGAACTGCCTAAGCAGCTGTACACACCCACTGTCATGTGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACCCTTGGGGACAGCAGTaGGTGGCTGTTTCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHPWGQQ*VAVSFL
Trigger: CAAGAAAGAAACAGCCACCAACTGCTGTCCCCAAGG...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGGGTTGGGCTGTACGTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGTTTCTCTGGTGTCTaGCAAGGTACTGGTCATATA +
Preference number: 5 (lower is better)
Translates to: VGWAVRAWGSSMLFTEHPCFSGV*QGTGHI
Trigger: TATATGACCAGTACCTTGCAAGACACCAGAGAAACA...AGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACCTTCTTCTTGGCCCTTaGCACTTTCCTCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHLLLGP*HFPPGL
Trigger: AAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAAG...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGCATTGTTGGGGTCATTaGGGTCGAGCTTGGACTCTG +
Preference number: 5 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLHCWGH*GRAWTL
Trigger: CAGAGTCCAAGCTCGACCCAAATGACCCCAACAATG...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGATCAAAGGGGCATTGTaGGGGTCATTTGGGTCGAGC +
Preference number: 5 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLIKGAL*GSFGSS
Trigger: GCTCGACCCAAATGACCCCAACAATGCCCCTTTGAT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCAAAGTTAAACTCCTGTaGCAGCTGCTCCAGTCTAAA +
Preference number: 5 (lower is better)
Translates to: VLGEAACFSLNILEDLDGKVKLL*QLLQSK
Trigger: TTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTTT...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTCCATCAGACAGGTTTaGGGCTGTCACCTTCTTCCG +
Preference number: 5 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLSIRQV*GCHLLP
Trigger: CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGA...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCGACGGCTGCTGGAATTaGCTCACTGCCGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QLKASLQNKACEEEIQRTDGCWN*LTAGFL
Trigger: GAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTC...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTCCACCAGTTCTGCAGTaGCCTGTAGATTATTGGGGT +
Preference number: 5 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGPPVLQ*PVDYWG
Trigger: ACCCCAATAATCTACAGGCAACTGCAGAACTGGTGG...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp AGGAAGCTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTACAGCAGTTGGTGGCTaGAAAAGATTTACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RKLSLMSEGEGETGVSHGTAVGG*KRFTLH
Trigger: GTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTGT...ACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000652443.1
CDS TCA 90 bp TCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGGGAGCCATGTaGATTCAGTACTTGGGATTTCAACTCAGACGTGGAGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: SYHIVGSNPELQGAM*IQYLGFQLRRGVSF
Trigger: GAATGACACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS GCA 90 bp GAAGTTGATTTGGAAGTAGGGGAGGTGAGATGGGGTTTGTTGGAATaGAATGGGAGAGGCCCTAGGAAGACTTGTTCTAGTAGAAATCCC +
Preference number: 5 (lower is better)
Translates to: EVDLEVGEVRWGLLE*NGRGPRKTCSSRNP
Trigger: GGGATTTCTACTAGAACAAGTCTTCCTAGGGCCTCTCCCATTGCATTCCAACAAACCCCATCTCACCTCCCCTACTTCCAAATCAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 90 bp GGGCGAGATCCTACTGCATGGATTGTTAAAACTTACTCTAGCTGCTaGTTATCCAAGGAAGAGAAGCCATGCTCTGGCCCTTACATTTCC +
Preference number: 5 (lower is better)
Translates to: GRDPTAWIVKTYSSC*LSKEEKPCSGPYIS
Trigger: GGAAATGTAAGGGCCAGAGCATGGCTTCTCTTCCTTGGATAAGCAGCAGCTAGAGTAAGTTTTAACAATCCATGCAGTAGGATCTCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp TCTGCTGTGACAATGGAGGAATTAAAGGTATCCCGTTTTCTCCAATaGCCCATGCCACACTATGAGACACTTTCCCTGAGGTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: SAVTMEELKVSRFLQ*PMPHYETLSLRSSE
Trigger: CTCTGATGACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGATACCTTTAATTCCTCCATTGTCACAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS CCA 90 bp ATGGCAAAGGCTAATGAAGTTGATTTGGAAGTAGGGGAGGTGAGATaGGGTTTGTTGGAATGCAATGGGAGAGGCCCTAGGAAGACTTGT +
Preference number: 5 (lower is better)
Translates to: MAKANEVDLEVGEVR*GLLECNGRGPRKTC
Trigger: ACAAGTCTTCCTAGGGCCTCTCCCATTGCATTCCAACAAACCCCATCTCACCTCCCCTACTTCCAAATCAACTTCATTAGCCTTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp TCAATGACTGGACTGTGGGCCTGGAATAGAGAGAGAGGTTTTGCATaGATTTATGTGGGTGTAGCCTCCTTTCTATATGTGGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: SMTGLWAWNRERGFA*IYVGVASFLYVERG
Trigger: GCCCCTTTCCACATATAGAAAGGAGGCTACACCCACATAAATCCATGCAAAACCTCTCTCTCTATTCCAGGCCCACAGTCCAGTCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp ACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTGGCTGTTTCTTTCTaGGCTGTCTTCGAACCTTTG +
Preference number: 5 (lower is better)
Translates to: TQSYREPCEFSTWDFNSDVAVSF*AVFEPL
Trigger: CAAAGGTTCGAAGACAGCCAAGAAAGAAACAGCCAC...GTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTCGGACACCATTTCCTaGGGGACAGCAGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSSDTIS*GTAVGG
Trigger: GCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp AGAAACCTCCCTCATTTCTTCCAAACATCTGATTCAAGCCTCACTAGGTTAACAACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: RNLPHFFQTSDSSLTRLTTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...TGTTAACCTAGTGAGGCTTGAATCAGATGTTTGGAAGAAATGAGGGAGGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTAGCCTGTTCTGGAAGTaGAAGGAATTGGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGSLFWK*KELEVS
Trigger: GCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCT...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGCCCTTCCTCCTCCTCTaGATTAGTTCCCGCTCTATG +
Preference number: 5 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQPFLLL*ISSRSM
Trigger: CATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGG...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTCCCTTCCTCCTCCTCTaGATTAGTTCCCGCTCTATG +
Preference number: 5 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCPFLLL*ISSRSM
Trigger: CATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGG...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAACTGGGGCACTGGTCATaGGGTGTTACGCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKLGHWS*GVTLPA
Trigger: GGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAG...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACGTCCTGGACACCTCCTaGTTGTTGAACAGCACTTTT +
Preference number: 5 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHVLDTS*LLNSTF
Trigger: AAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGAC...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTCCATCAGACAGGTTTaGGGCTGTCACCTTCTTCCG +
Preference number: 5 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLSIRQV*GCHLLP
Trigger: CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGA...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAGACGGCTGCTGGAATTaGCTCACTGCCGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKDGCWN*LTAGFL
Trigger: GAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTC...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAGATGTTCCATCAATCCTaGCTTGGAAATATATTGTGC +
Preference number: 5 (lower is better)
Translates to: RRVEVQYLFHRVRWRGLQMFHQS*LGNILC
Trigger: GCACAATATATTTCCAAGCAAGGATTGATGGAACAT...CTGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCCCACCAGTTCTGCAGTaGCCTGTAGATTATTGGGGT +
Preference number: 5 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFPPVLQ*PVDYWG
Trigger: ACCCCAATAATCTACAGGCAACTGCAGAACTGGTGG...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGAAAGATTTCCATAGCTaGGGCCTGGTGACATCAAAA +
Preference number: 5 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPKDFHS*GLVTSK
Trigger: TTTTGATGTCACCAGGCCCAAGCTATGGAAATCTTT...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACAGCTGCAGCCATGTCTaGGAGCAAAAACACCAGCTT +
Preference number: 5 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHSCSHV*EQKHQL
Trigger: AAGCTGGTGTTTTTGCTCCAAGACATGGCTGCAGCT...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS TCA 90 bp TTTCCATCTGCAGCCGATCATGGATGCTTTCATAATCTGCAGGTCTaGCTGCTACAAAATCGTCAGCCACGTGATCTAAGCCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: FPSAADHGCFHNLQV*LLQNRQPRDLSPIG
Trigger: TCCTATTGGGCTTAGATCACGTGGCTGACGATTTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATCCATGATCGGCTGCAGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp ACCATTAAGCAGTTCTTCCTCATCCATTTCCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTCCCCTTCCTCCTCCTCTTGATTAGT +
Preference number: 5 (lower is better)
Translates to: TIKQFFLIHFLSSSL*RWFFFFPFLLLLIS
Trigger: ACTAATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAGGAAATGGATGAGGAAGAACTGCTTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 90 bp GTTAAAACTTACTCTAGCTGCTGCTTATCCAAGGAAGAGAAGCCATaGTCTGGCCCTTACATTTCCTGCCTTATCTCTACCTTGCTCACC +
Preference number: 5 (lower is better)
Translates to: VKTYSSCCLSKEEKP*SGPYISCLISTLLT
Trigger: GGTGAGCAAGGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGCATGGCTTCTCTTCCTTGGATAAGCAGCAGCTAGAGTAAGTTTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 90 bp CATCCTGATATTAAATACCATTTCCTTTCCTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTCCTCCTCCTCTTGATTAGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: HPDIKYHFLSSSLCR*FFFFPFLLLLISSR
Trigger: GCGGGAACTAATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAGGAAATGGTATTTAATATCAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAGCTGTCTTCGAACCTTaGAGTTCTTATTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LSLMSEGEGETGVSHGERAVFEP*SSYSVF
Trigger: GAAGACAGAATAAGAACTCAAAGGTTCGAAGACAGC...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR CAA 90 bp GAGCAGGTAATTCCTAATGTTCATTGTACTGGGGAAGAAGAAAAGGCGTGTGTACCTTGGGGACAGCAGTaGGTGGCTGTTTCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: EQVIPNVHCTGEEEKACVPWGQQ*VAVSFL
Trigger: CAAGAAAGAAACAGCCACCAACTGCTGTCCCCAAGG...TACACACGCCTTTTCTTCTTCCCCAGTACAATGAACATTAGGAATTACCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CAA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTACAGGCTCCTGGGGGTaGCCAAGGTGGGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGTGSWG*PRWDFS
Trigger: CGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGAATGCACTTTCTGCTTaGGACCTCGCTGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLNALSA*DLAACN
Trigger: ATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCATT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCACTTCCCGCTCTATGTCTaGCTTTTGGTTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HIPASVSQYEYGFHFLFHFPLYV*LLVFPL
Trigger: CAGAGGAAAAACCAAAAGCAAGACATAGAGCGGGAA...GTGAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TGCTCCAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATGTTTCTCTGGTGTCTaGCAAGGTACTGGTCATATA +
Preference number: 5 (lower is better)
Translates to: CSRGHRYHQMRQCQARRECFSGV*QGTGHI
Trigger: TATATGACCAGTACCTTGCAAGACACCAGAGAAACA...TTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTCTGGACACCTCCTTGTaGTTGAACAGCACTTTTAAG +
Preference number: 5 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGLDTSL*LNSTFK
Trigger: CTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAG...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTCTGGACACCTCCTTGTaGTTGAACAGCACTTTTAAG +
Preference number: 5 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSLDTSL*LNSTFK
Trigger: CTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAG...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCGAATTCTGGCACCTCTaGGCTTCTAAGATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFEFWHL*ASKMKK
Trigger: CTTCTTCATCTTAGAAGCCAAGAGGTGCCAGAATTC...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCGTCATAGACTGGAACTaGCTTATAATTTCGGAATTC +
Preference number: 5 (lower is better)
Translates to: VLGEAACFSLNILEDLDGVIDWN*LIISEF
Trigger: GAATTCCGAAATTATAAGCAAGTTCCAGTCTATGAC...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGTCCGACCTTTTCTCCTaGGCCGCAGTGGTCGCTTTT +
Preference number: 5 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKSDLFS*AAVVAF
Trigger: AAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGGA...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp GTGCTTGGGGAAGCAGCATGCTTTTCACTGAACATCCTTGAAGACCTCGACGGCATGGCAAACTGTTCGTaGAAAAGAGACTTCTACAAA +
Preference number: 5 (lower is better)
Translates to: VLGEAACFSLNILEDLDGMANCS*KRDFYK
Trigger: TTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCAT...GCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAAGCATGCTGCTTCCCCAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CTCAGAAACCTCCCTCATTTCTTCCAAACATCTGATTCAAGCCTCACTAGGTTATCCCTGGGATTCATTTaGGCTGGGATGGGTCCCTTA +
Preference number: 5 (lower is better)
Translates to: LRNLPHFFQTSDSSLTRLSLGFI*AGMGPL
Trigger: TAAGGGACCCATCCCAGCCAAAATGAATCCCAGGGA...TAACCTAGTGAGGCTTGAATCAGATGTTTGGAAGAAATGAGGGAGGTTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CAA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCACAGCAGTTGGTGGCTaGAAAAGATTTACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFTAVGG*KRFTLH
Trigger: GTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTGT...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp CTTTCACTTATGTCAGAAGGGGAAGGGGAAACAGGTGTGTCGCATGGTGAGAGAAATCTAAGAGTCTACTaGCTTCCAAAGGCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: LSLMSEGEGETGVSHGERNLRVY*LPKASS
Trigger: ACTAGAGGCCTTTGGAAGCAAGTAGACTCTTAGATT...TCTCTCACCATGCGACACACCTGTTTCCCCTTCCCCTTCTGACATAAGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CAA 90 bp ACGCAGAGTAGAGGTACAATACCTATTCCACCGAGTCAGATGGCGTGGCCTCCAAAGAAAGGTCTGATATaGGGAACTTCTTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: TQSRGTIPIPPSQMAWPPKKGLI*GTSSST
Trigger: AGTAGAAGAAGAAGTTCCCAATATCAGACCTTTCTT...TGGAGGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS GCA 90 bp AATGGGCGAGATCCTACTGCATGGATTGTTAAAACTTACTCTAGCTaGTGCTTATCCAAGGAAGAGAAGCCATGCTCTGGCCCTTACATT +
Preference number: 5 (lower is better)
Translates to: NGRDPTAWIVKTYSS*CLSKEEKPCSGPYI
Trigger: AATGTAAGGGCCAGAGCATGGCTTCTCTTCCTTGGATAAGCAGCAGCTAGAGTAAGTTTTAACAATCCATGCAGTAGGATCTCGCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTGGAAGTTGAAGGAATaGGAGGTAAGCTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIWKLKE*EVSSVG
Trigger: GCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGTGGAAGTTGAAGGAATaGGAGGTAAGCTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: INRFNQGSSYHIVGSNPEWKLKE*EVSSVG
Trigger: GCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCA...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTTGGACCTCGCTGCTaGCAATTTCTCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFGPRC*QFLPHA
Trigger: CGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGTTTGGACCTCGCTGCTaGCAATTTCTCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: INRFNQGSSYHIVGSNPEFGPRC*QFLPHA
Trigger: CGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAA...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTTTGGACCTCGCTGCTaGCAATTTCTCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIFGPRC*QFLPHA
Trigger: CGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGAATGCACTTTCTGCTTaGGACCTCGCTGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQNALSA*DLAACN
Trigger: ATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCATT...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCATTCCCGCTCTATGTCTaGCTTTTGGTTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSFPLYV*LLVFPL
Trigger: CAGAGGAAAAACCAAAAGCAAGACATAGAGCGGGAA...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCCCTTCCTCCTCCTCTaGATTAGTTCCCGCTCTATG +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIPFLLL*ISSRSM
Trigger: CATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCCCTTCCTCCTCCTCTaGATTAGTTCCCGCTCTATG +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSPFLLL*ISSRSM
Trigger: CATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTAATATCAATGTCCAGTaGGAAATTTCCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGNINVQ*EISRRV
Trigger: GACCCTCCTGGAAATTTCCAACTGGACATTGATATT...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TGTTCACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTAATATCAATGTCCAGTaGGAAATTTCCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: CSPAALCLHQTGFGLSPSNINVQ*EISRRV
Trigger: GACCCTCCTGGAAATTTCCAACTGGACATTGATATT...AGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACTTCCTCTTTCGTAAGAAATTTCGCCTaGTTTCTCTGGTGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: HTSQPVSLNTSMDSTSSFVRNFA*FLWCLA
Trigger: TGCAAGACACCAGAGAAACAAGGCGAAATTTCTTAC...GAAAGAGGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCGTAAGAAATTTCGCCTaGTTTCTCTGGTGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SSLECRKLAQCSPAALCLVRNFA*FLWCLA
Trigger: TGCAAGACACCAGAGAAACAAGGCGAAATTTCTTAC...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GGTAAATTAGCTCTTCAGGCTGAACACTGGAAAGGCCAGGATATGGAAGGCTTCCTCATTGATGGTTTTTaGGATGGTATCGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: GKLALQAEHWKGQDMEGFLIDGF*DGIERL
Trigger: CAGTCTCTCGATACCATCCAAAAAACCATCAATGAG...GAAGCCTTCCATATCCTGGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCTTCTTCTTGGCCCTTaGCACTTTCCTCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLLLGP*HFPPGL
Trigger: AAGGCCTGGAGGAAAGTGCAAAGGGCCAAGAAGAAG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGTTCCTTTTCTTCTTCTaGGCCCTTTGCACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLFLFFF*ALCTFL
Trigger: GAGGAAAGTGCAAAGGGCCAAGAAGAAGAAAAGGAA...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCCTGGGGCACTGGTCATaGGGTGTTACGCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGLGHWS*GVTLPA
Trigger: GGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAG...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTCATTGTTGGGGTCATTaGGGTCGAGCTTGGACTCTG +
Preference number: 5 (lower is better)
Translates to: LQYYTQRQLKASLQNKACHCWGH*GRAWTL
Trigger: CAGAGTCCAAGCTCGACCCAAATGACCCCAACAATG...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGCTCTGTGGTAAAGTTAAACTCCTGTaGCAGCTGCTCCAGTCTAAA +
Preference number: 5 (lower is better)
Translates to: EIQRTCSLPAVLAVLLCGKVKLL*QLLQSK
Trigger: TTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTTT...ACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGGAATTCTGGCACCTCTaGGCTTCTAAGATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLEFWHL*ASKMKK
Trigger: CTTCTTCATCTTAGAAGCCAAGAGGTGCCAGAATTC...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GTTTGGTCCTTCAGCCGTAGTCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCGAATTCTGGCACCTCTaGGCTTCTAAGATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VWSFSRSRMANCSLKRDFEFWHL*ASKMKK
Trigger: CTTCTTCATCTTAGAAGCCAAGAGGTGCCAGAATTC...GAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACCTGCTGGAGGTACTaGGCTACTATGGCCCTATGG +
Preference number: 5 (lower is better)
Translates to: HIQLETSQLLEVISHLPETCWRY*ATMALW
Trigger: CCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGGT...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CACCAGCAGCTTTATGTCTCCATCAGACAGGTTTTGGGCTGTCACCTTCTTCCGATGTTCCATCAATCCTaGCTTGGAAATATATTGTGC +
Preference number: 5 (lower is better)
Translates to: HQQLYVSIRQVLGCHLLPMFHQS*LGNILC
Trigger: GCACAATATATTTCCAAGCAAGGATTGATGGAACAT...CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CTAACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTGGGATTTCAACTCAAGAGAGACGGTGCTGTaGAATCTTTTAAAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: LTQSYREPCEFSTWDFNSRETVL*NLLKGS
Trigger: GGACCCTTTTAAAAGATTCAACAGCACCGTCTCTCT...TGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp ATGGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATGGATTCCACAGAGAGACGGTGCTGTaGAATCTTTTAAAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: MAFSHIPASVSQYEYGFHRETVL*NLLKGS
Trigger: GGACCCTTTTAAAAGATTCAACAGCACCGTCTCTCT...GTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTCTGGGGCTATACTTaGAGAACCATGGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFWGYT*RTMAGA
Trigger: TGCCCCAGCCATGGTTCTCAAAGTATAGCCCCAGAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS CCA 90 bp GGAGGTACTTGGCTACTATGGCCCTATGGGTGTCTATGTGTTCCTTaGTTTCTATTACATTTCTGTCTCGTAACCGTTTCTCATAGTCCT +
Preference number: 5 (lower is better)
Translates to: GGTWLLWPYGCLCVP*FLLHFCLVTVSHSP
Trigger: AGGACTATGAGAAACGGTTACGAGACAGAAATGTAATAGAAACCAAGGAACACATAGACACCCATAGGGCCATAGTAGCCAAGTACCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000675768.1
ENST00000676337.1
ENST00000680586.1
CDS CCA 90 bp ACTGATTCTCTAACCTGCTGGAGGTACTTGGCTACTATGGCCCTATaGGTGTCTATGTGTTCCTTGGTTTCTATTACATTTCTGTCTCGT +
Preference number: 5 (lower is better)
Translates to: TDSLTCWRYLATMAL*VSMCSLVSITFLSR
Trigger: ACGAGACAGAAATGTAATAGAAACCAAGGAACACATAGACACCCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGGTTAGAGAATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000675768.1
ENST00000676337.1
ENST00000680586.1
CDS-3UTR CAA 90 bp CTCAGAAACCTCCCTCATTTCTTCCAAACATCTGATTCAAGCCTCACTAGGTTAGTGGCTGTTTCTTTCTaGGCTGTCTTCGAACCTTTG +
Preference number: 5 (lower is better)
Translates to: LRNLPHFFQTSDSSLTRLVAVSF*AVFEPL
Trigger: CAAAGGTTCGAAGACAGCCAAGAAAGAAACAGCCAC...TAACCTAGTGAGGCTTGAATCAGATGTTTGGAAGAAATGAGGGAGGTTTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CAA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTGGAAGTTGAAGGAATaGGAGGTAAGCTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGWKLKE*EVSSVG
Trigger: GCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTATAACTGGGCCAGCTaGGCTGCCAAAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSYNWAS*AAKTCS
Trigger: AGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CAATTAAAGGCTTCACTTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTATAACTGGGCCAGCTaGGCTGCCAAAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: QLKASLQNKACEEEIQRTYNWAS*AAKTCS
Trigger: AGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATA...GGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAAGTGAAGCCTTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTATAACTGGGCCAGCTaGGCTGCCAAAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIYNWAS*AAKTCS
Trigger: AGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGGACACCTCCTTGTTGTaGAACAGCACTTTTAAGTAC +
Preference number: 5 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLDTSLL*NSTFKY
Trigger: GTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTC...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGCTGGACACCTCCTTGTaGTTGAACAGCACTTTTAAG +
Preference number: 5 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLLDTSL*LNSTFK
Trigger: CTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAG...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAATCAAAGGGGCATTGTaGGGGTCATTTGGGTCGAGC +
Preference number: 5 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKIKGAL*GSFGSS
Trigger: GCTCGACCCAAATGACCCCAACAATGCCCCTTTGAT...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACCTGCTGGAGGTACTaGGCTACTATGGCCCTATGG +
Preference number: 5 (lower is better)
Translates to: GTSILCTPVLYTASIKGFTCWRY*ATMALW
Trigger: CCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGGT...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTTTTTGTTCTGCCAGCTaGAAAAGGCTTAGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCFCSAS*KRLRPK
Trigger: TTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAA...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAACCGCAGTGGTCGCTTTaGTTCTGCCAGCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKPQWSL*FCQLEK
Trigger: CTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGG...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGTCCATCAGACAGGTTTaGGGCTGTCACCTTCTTCCG +
Preference number: 5 (lower is better)
Translates to: QLLEVISHLPETQTFLEWSIRQV*GCHLLP
Trigger: CGGAAGAAGGTGACAGCCCAAAACCTGTCTGATGGA...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCAGCTGCAGCCATGTCTaGGAGCAAAAACACCAGCTT +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFISCSHV*EQKHQL
Trigger: AAGCTGGTGTTTTTGCTCCAAGACATGGCTGCAGCT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CAA 90 bp CCTCTAGTTTCCAACAGTTACTTATTTCCCAACTTTGCCATAGGGAAAACAGTCAGCTGCAGCCATGTCTaGGAGCAAAAACACCAGCTT +
Preference number: 5 (lower is better)
Translates to: PLVSNSYLFPNFAIGKTVSCSHV*EQKHQL
Trigger: AAGCTGGTGTTTTTGCTCCAAGACATGGCTGCAGCT...GACTGTTTTCCCTATGGCAAAGTTGGGAAATAAGTAACTGTTGGAAACTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS-3UTR CAA 90 bp AGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGCTACAGCAGCCACTTTCTTTCTaGCAGGGACATCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: RFNQGSSYHIVGSNPELQQPLSF*QGHQLF
Trigger: AAAAAGCTGATGTCCCTGCAAGAAAGAAAGTGGCTG...CTGTAGCTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp TCCTCACTGGAATGTCGTAAGCTCGCACAATGTTCACCAGCAGCTTTATGTCTCGTGGGTTTTATAGATTaGCAAAGAGTAGAGCTAGCT +
Preference number: 5 (lower is better)
Translates to: SSLECRKLAQCSPAALCLVGFID*QRVELA
Trigger: AGCTAGCTCTACTCTTTGCAAATCTATAAAACCCAC...GAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS GCA 90 bp CATTACCATCCTGATATTAAATACCATTTCCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTCCCCTTCCTCCTCCTCTTGATTAGT +
Preference number: 5 (lower is better)
Translates to: HYHPDIKYHFLSSSL*RWFFFFPFLLLLIS
Trigger: ACTAATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAGGAAATGGTATTTAATATCAGGATGGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp AGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGTGCTGTCTTCGAACCTTaGAGTTCTTATTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: SFGQNQNPAQESYFAPYCAVFEP*SSYSVF
Trigger: GAAGACAGAATAAGAACTCAAAGGTTCGAAGACAGC...ACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGTGGCTGTTTCTTTCTaGGCTGTCTTCGAACCTTTG +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSVAVSF*AVFEPL
Trigger: CAAAGGTTCGAAGACAGCCAAGAAAGAAACAGCCAC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCAGCCTGTTCTGGAAGTaGAAGGAATTGGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFISLFWK*KELEVS
Trigger: GCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGAGCCTGTTCTGGAAGTaGAAGGAATTGGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: INRFNQGSSYHIVGSNPESLFWK*KELEVS
Trigger: GCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCT...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGCCTGTTCTGGAAGTaGAAGGAATTGGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSSLFWK*KELEVS
Trigger: GCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCAATGCACTTTCTGCTTaGGACCTCGCTGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFINALSA*DLAACN
Trigger: ATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCATT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTAATGCACTTTCTGCTTaGGACCTCGCTGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: LQYYTQRQLKASLQNKACNALSA*DLAACN
Trigger: ATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCATT...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAATATAACTGGGCCAGCTaGGCTGCCAAAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKYNWAS*AAKTCS
Trigger: AGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATA...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TTCAGAATAAGGCATGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGAAACTCTCCGGCCAGTaGACTATTTGCAAATTGAAA +
Preference number: 5 (lower is better)
Translates to: FRIRHVKRKSREPVVSQLKLSGQ*TICKLK
Trigger: TTTCAATTTGCAAATAGTCAACTGGCCGGAGAGTTT...CAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACATGCCTTATTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp AAGCTTCGGACAGAATCAAAACCCCGCTCAAGAATCATATTTCGCTCCTTACTGAAAGTTAAACTCCTGTaGCAGCTGCTCCAGTCTAAA +
Preference number: 5 (lower is better)
Translates to: KLRTESKPRSRIIFRSLLKVKLL*QLLQSK
Trigger: TTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTTT...CAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp CAGAGGTCACAGATACCACCAAATGAGACAGTGTCAGGCAAGAAGGGAATCAAGGTCATAGACTGGAACTaGCTTATAATTTCGGAATTC +
Preference number: 5 (lower is better)
Translates to: QRSQIPPNETVSGKKGIKVIDWN*LIISEF
Trigger: GAATTCCGAAATTATAAGCAAGTTCCAGTCTATGAC...CTTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCTTGGGCTGTACGTGCTaGGGGAAGCAGCATGCTTTT +
Preference number: 5 (lower is better)
Translates to: GTSILCTPVLYTASIKGFLGCTC*GKQHAF
Trigger: AAAAGCATGCTGCTTCCCCAAGCACGTACAGCCCAA...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CCACCTCAGGGTTTCAGGTTCAGTAAGTCTCAGGTAGAACTTGTGAGCTTGCATTATAGGGTATGGTACTaGTGCCTTGAAAATTGCTTA +
Preference number: 5 (lower is better)
Translates to: PPQGFRFSKSQVELVSLHYRVWY*CLENCL
Trigger: TAAGCAATTTTCAAGGCACAAGTACCATACCCTATA...ATGCAAGCTCACAAGTTCTACCTGAGACTTACTGAACCTGAAACCCTGAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS TCA 90 bp GGGTTTAGGCTTGATTTTTCGTGCAGAATCATGGAACTTGACTCTTaGGTAACTTTGGGAGTCAACTTCTTGTTGAGTCCTTTCTACCTC +
Preference number: 5 (lower is better)
Translates to: GFRLDFSCRIMELDS*VTLGVNFLLSPFYL
Trigger: GAGGTAGAAAGGACTCAACAAGAAGTTGACTCCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCTAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 90 bp GGAAATAGTCTAGAAATTCTCCCAAATGGGCGAGATCCTACTGCATaGATTGTTAAAACTTACTCTAGCTGCTGCTTATCCAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: GNSLEILPNGRDPTA*IVKTYSSCCLSKEE
Trigger: CTCTTCCTTGGATAAGCAGCAGCTAGAGTAAGTTTTAACAATCCATGCAGTAGGATCTCGCCCATTTGGGAGAATTTCTAGACTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp GAAAAGAGGTTTATTTTGGCTCACTGTTCTGCAGACTGTGCAATAAGCATGGTGGCTGTCTTCGAACCTTaGAGTTCTTATTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: EKRFILAHCSADCAISMVAVFEP*SSYSVF
Trigger: GAAGACAGAATAAGAACTCAAAGGTTCGAAGACAGC...CACCATGCTTATTGCACAGTCTGCAGAACAGTGAGCCAAAATAAACCTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511544.6
ENST00000515124.6
CDS-3UTR CAA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGAGCCTGTTCTGGAAGTaGAAGGAATTGGAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: QLLEVISHLPETQTFLEWSLFWK*KELEVS
Trigger: GCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCT...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CAA 90 bp CAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGACTCAAACTTTTCTCGAATGGAATGCACTTTCTGCTTaGGACCTCGCTGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: QLLEVISHLPETQTFLEWNALSA*DLAACN
Trigger: ATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCATT...CCATTCGAGAAAAGTTTGAGTCTCAGGAAGATGAGAAATTACTTCAAGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTCCCGCTCTATGTCTaGCTTTTGGTTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFPLYV*LLVFPL
Trigger: CAGAGGAAAAACCAAAAGCAAGACATAGAGCGGGAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTTTCCCGCTCTATGTCTaGCTTTTGGTTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LQYYTQRQLKASLQNKACFPLYV*LLVFPL
Trigger: CAGAGGAAAAACCAAAAGCAAGACATAGAGCGGGAA...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCTTCCTTTTCTTCTTCTaGGCCCTTTGCACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIFLFFF*ALCTFL
Trigger: GAGGAAAGTGCAAAGGGCCAAGAAGAAGAAAAGGAA...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTTCCTTTTCTTCTTCTaGGCCCTTTGCACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSFLFFF*ALCTFL
Trigger: GAGGAAAGTGCAAAGGGCCAAGAAGAAGAAAAGGAA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTGCATCAAAGGGGCATaGTTGGGGTCATTTGGGTCG +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGCIKGA*LGSFGS
Trigger: CGACCCAAATGACCCCAACAATGCCCCTTTGATGCA...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCCCGCAGTGGTCGCTTTaGTTCTGCCAGCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGPQWSL*FCQLEK
Trigger: CTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGG...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TGTGAAGAGGAAATCCAGAGAACCTGTAGTCTCCCAGCTGTTTTAGCAGTTCTGATGGCAAACTGTTCGTaGAAAAGAGACTTCTACAAA +
Preference number: 5 (lower is better)
Translates to: CEEEIQRTCSLPAVLAVLMANCS*KRDFYK
Trigger: TTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCAT...CAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CATAAAAATGTCCACTGCAGGGATTCCATATTAAATAACGACCTTGCTCCCAAGCAGGAGATCAAGAAATaGATCAGATGTGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HKNVHCRDSILNNDLAPKQEIKK*IRCAPE
Trigger: CTCTGGAGCACATCTGATCAATTTCTTGATCTCCTG...CTTGGGAGCAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650860.2
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGAGAGACGGTGCTGTaGAATCTTTTAAAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSRETVL*NLLKGS
Trigger: GGACCCTTTTAAAAGATTCAACAGCACCGTCTCTCT...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CAA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTACAGCAGTTGGTGGCTaGAAAAGATTTACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGTAVGG*KRFTLH
Trigger: GTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTGT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651385.1
CDS CCA 90 bp CTCATAGTCCTGGAATACCTTTTCCATAATTTCTCGGTCATAGACTaGAACTTGCTTATAATTTCGGAATTCTGGCACCTCTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LIVLEYLFHNFSVID*NLLIISEFWHLLAS
Trigger: AGAAGCCAAGAGGTGCCAGAATTCCGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAAATTATGGAAAAGGTATTCCAGGACTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS CCA 90 bp ATCTTCCTGAGACTCAAACCTTGCTTGGAAATATATTGTGCTAAATaGCATTTTCACACATCCCAGCCAGTGTCTCTCAATACGAGTATG +
Preference number: 5 (lower is better)
Translates to: IFLRLKPCLEIYCAK*HFHTSQPVSLNTSM
Trigger: CATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCATTTAGCACAATATATTTCCAAGCAAGGTTTGAGTCTCAGGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674945.1
CDS-3UTR CAA 90 bp ATAAACAGGTTTAATCAAGGTTCTTCCTACCACATTGTAGGGTCTAACCCAGAGGCTGTCTTCGAACCTTaGAGTTCTTATTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: INRFNQGSSYHIVGSNPEAVFEP*SSYSVF
Trigger: GAAGACAGAATAAGAACTCAAAGGTTCGAAGACAGC...CTCTGGGTTAGACCCTACAATGTGGTAGGAAGAACCTTGATTAAACCTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS-3UTR CAA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTTCCCGCTCTATGTCTaGCTTTTGGTTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGFPLYV*LLVFPL
Trigger: CAGAGGAAAAACCAAAAGCAAGACATAGAGCGGGAA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCAATATCAATGTCCAGTaGGAAATTTCCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFININVQ*EISRRV
Trigger: GACCCTCCTGGAAATTTCCAACTGGACATTGATATT...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CTCCAGTACTATACACAGCGTCAATTAAAGGCTTCACTTCAGAATAAGGCATGTAATATCAATGTCCAGTaGGAAATTTCCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LQYYTQRQLKASLQNKACNINVQ*EISRRV
Trigger: GACCCTCCTGGAAATTTCCAACTGGACATTGATATT...ACATGCCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTTGTTTCTCTGGTGTCTaGCAAGGTACTGGTCATATA +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSCFSGV*QGTGHI
Trigger: TATATGACCAGTACCTTGCAAGACACCAGAGAAACA...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTGTAAGAAATTTCGCCTaGTTTCTCTGGTGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSVRNFA*FLWCLA
Trigger: TGCAAGACACCAGAGAAACAAGGCGAAATTTCTTAC...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CATCACCACTATCCACCTTCAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTCTCATTGATGGTTTTTaGGATGGTATCGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: HHHYPPSELLHHSKQKFSLIDGF*DGIERL
Trigger: CAGTCTCTCGATACCATCCAAAAAACCATCAATGAG...AGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTGAAGGTGGATAGTGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCTCATTGATGGTTTTTaGGATGGTATCGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFILIDGF*DGIERL
Trigger: CAGTCTCTCGATACCATCCAAAAAACCATCAATGAG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTGCTGTCTTCGAACCTTaGAGTTCTTATTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGAVFEP*SSYSVF
Trigger: GAAGACAGAATAAGAACTCAAAGGTTCGAAGACAGC...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512702.6
CDS-3UTR CAA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTAATATCAATGTCCAGTaGGAAATTTCCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGNINVQ*EISRRV
Trigger: GACCCTCCTGGAAATTTCCAACTGGACATTGATATT...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGCTCATTGATGGTTTTTaGGATGGTATCGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: HIQLETSQLLEVISHLPELIDGF*DGIERL
Trigger: CAGTCTCTCGATACCATCCAAAAAACCATCAATGAG...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAGACACCTCCTTGTTGTaGAACAGCACTTTTAAGTAC +
Preference number: 5 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKDTSLL*NSTFKY
Trigger: GTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTC...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAGTCCTGGACACCTCCTaGTTGTTGAACAGCACTTTT +
Preference number: 5 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASVLDTS*LLNSTF
Trigger: AAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGAC...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CAATTACTATGTTGTCTAACCATCACCACTATCCACCTTCAGAGCTTCTTCATCCACTTCACAGCAAATTaGCAAGAAGTATCCAAGACA +
Preference number: 5 (lower is better)
Translates to: QLLCCLTITTIHLQSFFIHFTAN*QEVSKT
Trigger: TGTCTTGGATACTTCTTGCAAATTTGCTGTGAAGTG...GATGAAGAAGCTCTGAAGGTGGATAGTGGTGATGGTTAGACAACATAGTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS TCA 90 bp AAATATCAATGTCCAGTTGGAAATTTCCAGGAGGGTCTCCAGATCTaGTCACATGCTGACTACTGTGAACGTATTTTACAGCCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: KYQCPVGNFQEGLQI*SHADYCERILQPFY
Trigger: ATAAAAAGGCTGTAAAATACGTTCACAGTAGTCAGCATGTGATCAGATCTGGAGACCCTCCTGGAAATTTCCAACTGGACATTGATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCCCGCTCTATGTCTaGCTTTTGGTTTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGFPLYV*LLVFPL
Trigger: CAGAGGAAAAACCAAAAGCAAGACATAGAGCGGGAA...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCATTTTGTTCTGCCAGCTaGAAAAGGCTTAGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASFCSAS*KRLRPK
Trigger: TTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAA...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCCAGGAGATCAAGAAATaGATCAGATGTGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGQEIKK*IRCAPE
Trigger: CTCTGGAGCACATCTGATCAATTTCTTGATCTCCTG...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CACATTCAGCTTGAAACTTCTCAGTTGCTTGAAGTAATTTCTCATCTTCCTGAGAAATACTTACTGCAGTaGCCTGTAGATTATTGGGGT +
Preference number: 5 (lower is better)
Translates to: HIQLETSQLLEVISHLPEKYLLQ*PVDYWG
Trigger: ACCCCAATAATCTACAGGCAACTGCAGTAAGTATTT...CTCAGGAAGATGAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676337.1
CDS TCA 90 bp CTAATGAGTCAATCAAGCAAATACAGTCAATTCCCAATATCTGTGTaGATATCAAATCTTTCCTGCTGTTCTACACTCTCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: LMSQSSKYSQFPISV*ISNLSCCSTLSPST
Trigger: TGTGCTTGGTGAGAGTGTAGAACAGCAGGAAAGATTTGATATTCACACAGATATTGGGAATTGACTGTATTTGCTTGATTGACTCATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS-3UTR CAA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCATGTTTCTCTGGTGTCTaGCAAGGTACTGGTCATATA +
Preference number: 5 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASCFSGV*QGTGHI
Trigger: TATATGACCAGTACCTTGCAAGACACCAGAGAAACA...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCGTAAGAAATTTCGCCTaGTTTCTCTGGTGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGVRNFA*FLWCLA
Trigger: TGCAAGACACCAGAGAAACAAGGCGAAATTTCTTAC...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp CAGAGCTTCTTCATCATTCCAAACAGAAATTCTCTAGTAATTAAAGGGGGTGGTTATAGGGTATGGTACTaGTGCCTTGAAAATTGCTTA +
Preference number: 5 (lower is better)
Translates to: QSFFIIPNRNSLVIKGGGYRVWY*CLENCL
Trigger: TAAGCAATTTTCAAGGCACAAGTACCATACCCTATA...ACCACCCCCTTTAATTACTAGAGAATTTCTGTTTGGAATGATGAAGAAGCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS-3UTR CAA 90 bp TCGTATGGCAAACTGTTCGTTGAAAAGAGACTTCTACAAAGGGACGTACTAAAAAAGAAAGGTCTGATATaGGGAACTTCTTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: SYGKLFVEKRLLQRDVLKKKGLI*GTSSST
Trigger: AGTAGAAGAAGAAGTTCCCAATATCAGACCTTTCTT...TTTTAGTACGTCCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000650860.2
ENST00000676337.1
CDS-3UTR CAA 90 bp GGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCGTCATAGACTGGAACTaGCTTATAATTTCGGAATTC +
Preference number: 5 (lower is better)
Translates to: GTSILCTPVLYTASIKGFVIDWN*LIISEF
Trigger: GAATTCCGAAATTATAAGCAAGTTCCAGTCTATGAC...GAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCCCCAAAATGCTGATATaGGGAACTTCTTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGPKMLI*GTSSST
Trigger: AGTAGAAGAAGAAGTTCCCAATATCAGCATTTTGGG...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634028.2
CDS CCA 90 bp GCCTACTTTCTCAAAACAAGTTTCAAGGGAGTATTTGTAAATCTCTaGAACTCTCGAAGGGATTTCATCTCTTTCCAAACTTTTATGATA +
Preference number: 5 (lower is better)
Translates to: AYFLKTSFKGVFVNL*NSRRDFISFQTFMI
Trigger: TATCATAAAAGTTTGGAAAGAGATGAAATCCCTTCGAGAGTTCCAGAGATTTACAAATACTCCCTTGAAACTTGTTTTGAGAAAGTAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510220.1
CDS-3UTR CAA 90 bp TTAGGAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCATGGCAAACTGTTCGTaGAAAAGAGACTTCTACAAA +
Preference number: 5 (lower is better)
Translates to: LGTSILCTPVLYTASIKGMANCS*KRDFYK
Trigger: TTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCAT...GCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS-3UTR CAA 90 bp GAACATCAATATTATGTACTCCAGTACTATACACAGCGTCAATTAAAGGCTTCAATGTTCCATCAATCCTaGCTTGGAAATATATTGTGC +
Preference number: 5 (lower is better)
Translates to: EHQYYVLQYYTQRQLKASMFHQS*LGNILC
Trigger: GCACAATATATTTCCAAGCAAGGATTGATGGAACAT...TGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634028.2
ENST00000650860.2
CDS CAA 90 bp AAGCTCCGTGGGCCTCTCCGGACTGTCATACTCAGGAGGCGGGTCTaGGGCTCCTCCTGCACAGGCTCCTGGGGGTTGCCAAGGTGGGAT +
Preference number: 6 (lower is better)
Translates to: KLRGPLRTVILRRRV*GSSCTGSWGLPRWD
Trigger: ATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCCTGAGTATGACAGTCCGGAGAGGCCCACGGAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 72 bp AGGAGGGGAACTCCTGCGGAGAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAAGGAGTTGGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RRGTPAERWGRI*QQAREKGVGFC
Trigger: GCAGAAGCCAACTCCTTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGTTCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000506643.5
ENST00000511544.6
ENST00000650860.2
ENST00000651385.1
ENST00000652443.1
ENST00000674945.1
CDS CCA 72 bp GGTCCGGAGGGAAAGGCTGAGTGTTGGAGATGCCCCTaGGCTCCTCCCTGGGAAGCTGCAGCCATGTCTTGG +
Preference number: 6 (lower is better)
Translates to: GPEGKAECWRCP*APPWEAAAMSW
Trigger: CCAAGACATGGCTGCAGCTTCCCAGGGAGGAGCCCAGGGGCATCTCCAACACTCAGCCTTTCCCTCCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424120.6
ENST00000503292.6
ENST00000512702.6
ENST00000513811.5
ENST00000515124.6
ENST00000676337.1
CDS GCA 72 bp AGGAGGGGAACTCCTGCGGAGAGGTGGGGGAGGATCTaGCAGCAGGCTCGGGAGAAAGGAGTTGGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: RRGTPAERWGRI*QQAREKGVGFC
Trigger: ACAGAAGCCAACTCCTTTCTCCCGAGCCTGCTGGCAGATCCTCCCCCACCTCTCCGCAGGAGTTCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503658.2
CDS CCA 72 bp CCCTTCTCGAGACCTCCGCTCTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCAGGCTTAGCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: PFSRPPLWGTGH*VLRFLPGLAPG
Trigger: TCCCGGAGCTAAGCCTGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAGAGCGGAGGTCTCGAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
CDS CAA 72 bp TCCCTTCTCGAGACCTCCGCTCTGGGGCACTGGTCATaGGGTGTTACGCTTCCTGCCAGGCTTAGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: SLLETSALGHWS*GVTLPARLSSG
Trigger: CCCGGAGCTAAGCCTGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAGAGCGGAGGTCTCGAGAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
CDS CAA 90 bp CCAGCTGTGGTGCTGCAACCAGGTTTCCTCGTCCACCCCAGAAGCTaGTGGGTGGGGTCTCAGCCACCTCTACTGCCATGCGACAGGAGA +
Preference number: 6 (lower is better)
Translates to: PAVVLQPGFLVHPRS*WVGSQPPLLPCDRR
Trigger: TCTCCTGTCGCATGGCAGTAGAGGTGGCTGAGACCCCACCCACAAGCTTCTGGGGTGGACGAGGAAACCTGGTTGCAGCACCACAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp AGGCAGGAGAATTGCTTGAACCCGAGAGACGGAGGTTaGGTTGAGCCGAGATCGCTCCGTTGCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQENCLNPRDGG*VEPRSLRCTPA
Trigger: GGCTGGAGTGCAACGGAGCGATCTCGGCTCAACGCAACCTCCGTCTCTCGGGTTCAAGCAATTCTCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675768.1
CDS CCA 72 bp AACCAGGTTTCCTCGTCCACCCCAGAAGCTTGTGGGTaGGGTCTCAGCCACCTCTACTGCCATGCGACAGGA +
Preference number: 6 (lower is better)
Translates to: NQVSSSTPEACG*GLSHLYCHATG
Trigger: TCCTGTCGCATGGCAGTAGAGGTGGCTGAGACCCCACCCACAAGCTTCTGGGGTGGACGAGGAAACCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 72 bp ACCAAGCACATGCACCAGCTCTCTGCCCACCAGCTGTaGTGCTGCAACCAGGTTTCCTCGTCCACCCCAGAA +
Preference number: 6 (lower is better)
Translates to: TKHMHQLSAHQL*CCNQVSSSTPE
Trigger: TTCTGGGGTGGACGAGGAAACCTGGTTGCAGCACCACAGCTGGTGGGCAGAGAGCTGGTGCATGTGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 72 bp CCCCTGGGCTCCTCCCTGGGAAGCTGCAGCCATGTCTaGGAGCAAAAACACCAGCTTAGCAACCCGTTCCTA +
Preference number: 6 (lower is better)
Translates to: PLGSSLGSCSHV*EQKHQLSNPFL
Trigger: TAGGAACGGGTTGCTAAGCTGGTGTTTTTGCTCCAAGACATGGCTGCAGCTTCCCAGGGAGGAGCCCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515124.6
CDS TCA 72 bp CCTCCCTCCCCTGGAGGTAAGTCCTCCCTGAGACTTTaGTGTCTCCATAGCAGTCAGCATGGGAGCACCATG +
Preference number: 6 (lower is better)
Translates to: PPSPGGKSSLRL*CLHSSQHGSTM
Trigger: CATGGTGCTCCCATGCTGACTGCTATGGAGACATCAAAGTCTCAGGGAGGACTTACCTCCAGGGGAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp CTTCGTAAGCGTCTGGGCCGAGGAGTGGGGATTTCCTaGAGCAATGCACTTTCTGCTTTGGACCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: LRKRLGRGVGIS*SNALSALDLAA
Trigger: AGCAGCGAGGTCCAAAGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGACGCTTACGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 72 bp GCTGGGCTTCACAAGGTCCTCCTCGGGATACGGCTCTaGAATCTCATCACCGGGATGTTCTTCTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: AGLHKVLLGIRL*NLITGMFFCCL
Trigger: CAAGCAGCAGAAGAACATCCCGGTGATGAGATTGCAGAGCCGTATCCCGAGGAGGACCTTGTGAAGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 72 bp GTTCTACACTCTCACCAAGCACATGCACCAGCTCTCTaGCCACCAGCTGTGGTGCTGCAACCAGGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: VLHSHQAHAPAL*PPAVVLQPGFL
Trigger: GAGGAAACCTGGTTGCAGCACCACAGCTGGTGGGCAGAGAGCTGGTGCATGTGCTTGGTGAGAGTGTAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 90 bp GTTCTCTGCTTCCTTCCTGAGGATCAGAGCTGGCTAAGTGACCTCTaGACTGGAGCCCCTCTTTGCAAGAGGCACATGCCAGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: VLCFLPEDQSWLSDL*TGAPLCKRHMPAEA
Trigger: AGCCTCAGCTGGCATGTGCCTCTTGCAAAGAGGGGCTCCAGTCAAGAGGTCACTTAGCCAGCTCTGATCCTCAGGAAGGAAGCAGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS TCA 72 bp GGGTCCTGCATCAGCAATCTGTTCTCCATGATGTTCTaGTTGGTGCGTGCCACCTCTGGTCTTACCCCGGTG +
Preference number: 6 (lower is better)
Translates to: GSCISNLFSMMF*LVRATSGLTPV
Trigger: CACCGGGGTAAGACCAGAGGTGGCACGCACCAATCAGAACATCATGGAGAACAGATTGCTGATGCAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 72 bp CTATACTTTGAGAACCATGGCTGGGGCACTGGTCATTaGGTGTTACGCTTCCTGCCAGGCTTAGCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: LYFENHGWGTGH*VLRFLPGLAPG
Trigger: TCCCGGAGCTAAGCCTGGCAGGAAGCGTAACACCCAATGACCAGTGCCCCAGCCATGGTTCTCAAAGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS CAA 72 bp GCCATCATACGGAAGAGGAGGGCAGAATGGGAGGACTaGCAAAAGAGTGGGACAGCCCTGATAGCTACCCTC +
Preference number: 6 (lower is better)
Translates to: AIIRKRRAEWED*QKSGTALIATL
Trigger: GAGGGTAGCTATCAGGGCTGTCCCACTCTTTTGCAAGTCCTCCCATTCTGCCCTCCTCTTCCGTATGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680586.1
CDS TCA 72 bp TCCTTGGCCGCAGTGGTCGCTTTTGTTCTGCCAGCTTaGAAAGGCTTAGGCCCAAAATGCCTGAGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: SLAAVVAFVLPA*KGLGPKCLSLQ
Trigger: CTGAAGGCTCAGGCATTTTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGGCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389652.11
CDS CCA 72 bp TCTTACTGGGACTTCGTAAGCGTCTGGGCCGAGGAGTaGGGATTTCCTGCAGCAATGCACTTTCTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: SYWDFVSVWAEE*GFPAAMHFLLW
Trigger: CCAAAGCAGAAAGTGCATTGCTGCAGGAAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTCCCAGTAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 72 bp CACATGGTTCTCTGCTTCCTTCCTGAGGATCAGAGCTaGCTAAGTGACCTCTTGACTGGAGCCCCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: HMVLCFLPEDQS*LSDLLTGAPLC
Trigger: GCAAAGAGGGGCTCCAGTCAAGAGGTCACTTAGCCAGCTCTGATCCTCAGGAAGGAAGCAGAGAACCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 72 bp AAACATGCCTATGGTCTCCCATCCTTCACATTTGCTTaGGCCAGTCCTGCAGAGGGAATGCCTCCCTGCATC +
Preference number: 6 (lower is better)
Translates to: KHAYGLPSFTFA*ASPAEGMPPCI
Trigger: GATGCAGGGAGGCATTCCCTCTGCAGGACTGGCCCAAGCAAATGTGAAGGATGGGAGACCATAGGCATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 90 bp ATGCTCTGCTCCTGTGTTAGTACTGGCGGCCTTGAAGGAAATGGCTaGATGGGGTTTGGCAGAGCTAGGATCCTGCCGTCATCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: MLCSCVSTGGLEGNG*MGFGRARILPSSPN
Trigger: GTTTGGAGATGACGGCAGGATCCTAGCTCTGCCAAACCCCATCAAGCCATTTCCTTCAAGGCCGCCAGTACTAACACAGGAGCAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CAA 90 bp TCATTCTCCTGGTGGTGGCAGGTTTCTCCTCAGCCACTTTCTTTCTaGCAGGGACATCAGCTTTTTCCTCCTAGCCCTCCACCCACACCT +
Preference number: 6 (lower is better)
Translates to: SFSWWWQVSPQPLSF*QGHQLFPPSPPPTP
Trigger: AGGTGTGGGTGGAGGGCTAGGAGGAAAAAGCTGATGTCCCTGCAAGAAAGAAAGTGGCTGAGGAGAAACCTGCCACCACCAGGAGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS TCA 72 bp GGTATCCCGTTTTCTCCAATGGCCCATGCCACACTATaGGACACTTTCCCTGAGGTCATCAGAGTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: GIPFSPMAHATL*DTFPEVIRVSW
Trigger: CCAGCTGACTCTGATGACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS GCA 72 bp CAGCAATCTGTTCTCCATGATGTTCTGATTGGTGCGTaGCACCTCTGGTCTTACCCCGGTGTAAAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: QQSVLHDVLIGA*HLWSYPGVKAF
Trigger: GAAGGCCTTTACACCGGGGTAAGACCAGAGGTGGCACGCACCAATCAGAACATCATGGAGAACAGATTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 72 bp GCCTGCTCCCTTCACATGACAGTGGGTGTGTACAGCTaGTTAGGCAGTTCCTGGGTTATCTCTTTCACTCTG +
Preference number: 6 (lower is better)
Translates to: ACSLHMTVGVYS*LGSSWVISFTL
Trigger: CAGAGTGAAAGAGATAACCCAGGAACTGCCTAAGCAGCTGTACACACCCACTGTCATGTGAAGGGAGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp TTTGCTTGGGCCAGTCCTGCAGAGGGAATGCCTCCCTaGATCTTCCTTGTCTGCCTAGTTGGTTGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: FAWASPAEGMPP*IFLVCLVGCSF
Trigger: AAAACTGCAACCAACTAGGCAGACAAGGAAGATGCAGGGAGGCATTCCCTCTGCAGGACTGGCCCAAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 72 bp GCTCTGTGCCAAATTCAGTCTCCAATTCTTTCTTACTaGGACTTCGTAAGCGTCTGGGCCGAGGAGTGGGGA +
Preference number: 6 (lower is better)
Translates to: ALCQIQSPILSY*DFVSVWAEEWG
Trigger: TCCCCACTCCTCGGCCCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGGAGACTGAATTTGGCACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 72 bp GTTCTCCATGATGTTCTGATTGGTGCGTGCCACCTCTaGTCTTACCCCGGTGTAAAGGCCTTCATCTTCCAG +
Preference number: 6 (lower is better)
Translates to: VLHDVLIGACHL*SYPGVKAFIFQ
Trigger: CTGGAAGATGAAGGCCTTTACACCGGGGTAAGACCAGAGGTGGCACGCACCAATCAGAACATCATGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CAA 72 bp GCTCCTAGTGGCCGACTGACTGTCCTGGACACCTCCTaGTTGTTGAACAGCACTTTTAAGTACACTGAGCGC +
Preference number: 6 (lower is better)
Translates to: APSGRLTVLDTS*LLNSTFKYTER
Trigger: GCGCTCAGTGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
CDS CAA 90 bp GAGAAGCCATGCTCTGGCCCTTACATTTCCTGCCTTATCTCTACCTaGCTCACCCACCAGTTCCTCAAACATGCCTATGGTCTCCCATCC +
Preference number: 6 (lower is better)
Translates to: EKPCSGPYISCLIST*LTHQFLKHAYGLPS
Trigger: GGATGGGAGACCATAGGCATGTTTGAGGAACTGGTGGGTGAGCAAGGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGCATGGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS TCA 72 bp CCACTTCCAACTCCCTCGTGGTCCAGTGTCACATGCTaGTTACTGCTAAACTCCACTTCTTCAGTAGGAGCC +
Preference number: 6 (lower is better)
Translates to: PLPTPSWSSVTC*LLLNSTSSVGA
Trigger: GGCTCCTACTGAAGAAGTGGAGTTTAGCAGTAATCAGCATGTGACACTGGACCACGAGGGAGTTGGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS TCA 72 bp AGTGATGCTGATGCTGCTGATTCTGGGGCTATACTTTaGGAACCATGGCTGGGGCACTGGTCATTGGGTGTT +
Preference number: 6 (lower is better)
Translates to: SDADAADSGAIL*EPWLGHWSLGV
Trigger: AACACCCAATGACCAGTGCCCCAGCCATGGTTCTCAAAGTATAGCCCCAGAATCAGCAGCATCAGCATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512702.6
ENST00000651385.1
CDS GCA 72 bp CTGCTTTGGACCTCGCTGCTTGCAATTTCTCCCTCATaGGTCCCCTCATGGAAAATTCTGCAAAGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LLWTSLLAISPS*VPSWKILQSLF
Trigger: GAACAGGCTTTGCAGAATTTTCCATGAGGGGACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 72 bp GCTCTGGCCCTTACATTTCCTGCCTTATCTCTACCTTaGTCACCCACCAGTTCCTCAAACATGCCTATGGTC +
Preference number: 6 (lower is better)
Translates to: ALALTFPALSLP*SPTSSSNMPMV
Trigger: GACCATAGGCATGTTTGAGGAACTGGTGGGTGAGCAAGGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp AAGGAAGAGAAGCCATGCTCTGGCCCTTACATTTCCTaGCTTATCTCTACCTTGCTCACCCACCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: KEEKPCSGPYIS*LISTLLTHQFL
Trigger: GAGGAACTGGTGGGTGAGCAAGGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGCATGGCTTCTCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 72 bp GGTTGCCAAGGTGGGATTTTTCGGACACCATTTCCTTaGGGACAGCAGTTGGTGGCTGTTTCTTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: GCQGGIFRTPFP*GQQLVAVSFLA
Trigger: AGCCAAGAAAGAAACAGCCACCAACTGCTGTCCCCAAGGAAATGGTGTCCGAAAAATCCCACCTTGGCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000507954.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000515124.6
ENST00000676337.1
CDS CCA 72 bp TGCGTCCCCTCATGGAAAATTCTGCAAAGCCTGTTCTaGAAGTTGAAGGAATTGGAGGTAAGCTCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: CVPSWKILQSLF*KLKELEVSSVG
Trigger: GCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCTTTGCAGAATTTTCCATGAGGGGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CAA 72 bp CCTAGTGGCCGACTGACTGTCCTGGACACCTCCTTGTaGTTGAACAGCACTTTTAAGTACACTGAGCGCTTC +
Preference number: 6 (lower is better)
Translates to: PSGRLTVLDTSL*LNSTFKYTERF
Trigger: GAAGCGCTCAGTGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
CDS CAA 90 bp CGGAAGTCTGCTCCTAGTGGCCGACTGACTGTCCTGGACACCTCCTaGTTGTTGAACAGCACTTTTAAGTACACTGAGCGCTTCTTTACA +
Preference number: 6 (lower is better)
Translates to: RKSAPSGRLTVLDTS*LLNSTFKYTERFFT
Trigger: TGTAAAGAAGCGCTCAGTGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAGCAGACTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
CDS TCA 72 bp TCTGCAGGTCTGACTGCTACAAAATCGTCAGCCACGTaGTCTAAGCCCAATAGGAAGTCCTCGGCATCATCA +
Preference number: 6 (lower is better)
Translates to: SAGLTATKSSAT*SKPNRKSSASS
Trigger: TGATGATGCCGAGGACTTCCTATTGGGCTTAGATCACGTGGCTGACGATTTTGTAGCAGTCAGACCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS TCA 72 bp TTCTTTCGGGGTCCTGCATCAGCAATCTGTTCTCCATaGTGTTCTGATTGGTGCGTGCCACCTCTGGTCTTA +
Preference number: 6 (lower is better)
Translates to: FFRGPASAICSP*CSDWCVPPLVL
Trigger: TAAGACCAGAGGTGGCACGCACCAATCAGAACATCATGGAGAACAGATTGCTGATGCAGGACCCCGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS TCA 72 bp TCCAGCTGGAAGGGTTACTCTCTCTTCCAAACCTCTTaGGCTCCTATTAGCCTGCTCCCTTCACATGACAGT +
Preference number: 6 (lower is better)
Translates to: SSWKGYSLFQTS*APISLLPSHDS
Trigger: ACTGTCATGTGAAGGGAGCAGGCTAATAGGAGCTCAAGAGGTTTGGAAGAGAGAGTAACCCTTCCAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp ACACTTTCCCTGAGGTCATCAGAGTCAGCTGGTTACTaGCATCAGCTTCAAATGAGAAGGGCACTCCACTTC +
Preference number: 6 (lower is better)
Translates to: TLSLRSSESAGY*HQLQMRRALHF
Trigger: GAAGTGGAGTGCCCTTCTCATTTGAAGCTGATGGCAGTAACCAGCTGACTCTGATGACCTCAGGGAAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS GCA 72 bp TTGGAAGTAGGGGAGGTGAGATGGGGTTTGTTGGAATaGAATGGGAGAGGCCCTAGGAAGACTTGTTCTAGT +
Preference number: 6 (lower is better)
Translates to: LEVGEVRWGLLE*NGRGPRKTCSS
Trigger: ACTAGAACAAGTCTTCCTAGGGCCTCTCCCATTGCATTCCAACAAACCCCATCTCACCTCCCCTACTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp TATCTCTACCTTGCTCACCCACCAGTTCCTCAAACATaGCTATGGTCTCCCATCCTTCACATTTGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: YLYLAHPPVPQT*LWSPILHICLG
Trigger: GCCCAAGCAAATGTGAAGGATGGGAGACCATAGGCATGTTTGAGGAACTGGTGGGTGAGCAAGGTAGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 72 bp GGATTTCAACTCAGACGTGGAGTGTCATTCTCCTGGTaGTGGCAGGTTTCTCCTCAGCCACTTTCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: GFQLRRGVSFSW*WQVSPQPLSFL
Trigger: CAAGAAAGAAAGTGGCTGAGGAGAAACCTGCCACCACCAGGAGAATGACACTCCACGTCTGAGTTGAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS CCA 72 bp TTGGGATTTCAACTCAGACGTGGAGTGTCATTCTCCTaGTGGTGGCAGGTTTCTCCTCAGCCACTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: LGFQLRRGVSFS*WWQVSPQPLSF
Trigger: GAAAGAAAGTGGCTGAGGAGAAACCTGCCACCACCAGGAGAATGACACTCCACGTCTGAGTTGAAATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS CCA 72 bp GCTAATGAAGTTGATTTGGAAGTAGGGGAGGTGAGATaGGGTTTGTTGGAATGCAATGGGAGAGGCCCTAGG +
Preference number: 6 (lower is better)
Translates to: ANEVDLEVGEVR*GLLECNGRGPR
Trigger: CCTAGGGCCTCTCCCATTGCATTCCAACAAACCCCATCTCACCTCCCCTACTTCCAAATCAACTTCATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 72 bp TGTCTTGCAAGGTACTGGTCATATAACTGGGCCAGCTaGGCTGCCAAAACATGCTCTCGGCTAAAACAGGGA +
Preference number: 6 (lower is better)
Translates to: CLARYWSYNWAS*AAKTCSRLKQG
Trigger: TCCCTGTTTTAGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTACCTTGCAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CAA 72 bp TGCTCTGGCCCTTACATTTCCTGCCTTATCTCTACCTaGCTCACCCACCAGTTCCTCAAACATGCCTATGGT +
Preference number: 6 (lower is better)
Translates to: CSGPYISCLIST*LTHQFLKHAYG
Trigger: ACCATAGGCATGTTTGAGGAACTGGTGGGTGAGCAAGGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 90 bp AAGTCTGCTCCTAGTGGCCGACTGACTGTCCTGGACACCTCCTTGTaGTTGAACAGCACTTTTAAGTACACTGAGCGCTTCTTTACATCC +
Preference number: 6 (lower is better)
Translates to: KSAPSGRLTVLDTSL*LNSTFKYTERFFTS
Trigger: GGATGTAAAGAAGCGCTCAGTGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
CDS TCA 72 bp GCAGCCGATCATGGATGCTTTCATAATCTGCAGGTCTaGCTGCTACAAAATCGTCAGCCACGTGATCTAAGC +
Preference number: 6 (lower is better)
Translates to: AADHGCFHNLQV*LLQNRQPRDLS
Trigger: GCTTAGATCACGTGGCTGACGATTTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATCCATGATCGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS GCA 72 bp TACTCTAGCTGCTGCTTATCCAAGGAAGAGAAGCCATaGTCTGGCCCTTACATTTCCTGCCTTATCTCTACC +
Preference number: 6 (lower is better)
Translates to: YSSCCLSKEEKP*SGPYISCLIST
Trigger: GGTAGAGATAAGGCAGGAAATGTAAGGGCCAGAGCATGGCTTCTCTTCCTTGGATAAGCAGCAGCTAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 72 bp CATGTGAATTCAGTACTTGGGATTTCAACTCAGACGTaGAGTGTCATTCTCCTGGTGGTGGCAGGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: HVNSVLGISTQT*SVILLVVAGFS
Trigger: GGAGAAACCTGCCACCACCAGGAGAATGACACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS CCA 72 bp ACCCAGAGCTACAGGGAGCCATGTGAATTCAGTACTTaGGATTTCAACTCAGACGTGGAGTGTCATTCTCCT +
Preference number: 6 (lower is better)
Translates to: TQSYREPCEFST*DFNSDVECHSP
Trigger: AGGAGAATGACACTCCACGTCTGAGTTGAAATCCCAAGTACTGAATTCACATGGCTCCCTGTAGCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS CCA 72 bp ATGACAGTGGGTGTGTACAGCTGCTTAGGCAGTTCCTaGGTTATCTCTTTCACTCTGGAGTTAGAACTGGGT +
Preference number: 6 (lower is better)
Translates to: MTVGVYSCLGSS*VISFTLELELG
Trigger: ACCCAGTTCTAACTCCAGAGTGAAAGAGATAACCCAGGAACTGCCTAAGCAGCTGTACACACCCACTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 90 bp ATCACCATTAAGCAGTTCTTCCTCATCCATTTCCTTTCCTCCTCCTaGTGCAGGTGGTTCTTCTTCTTCCCCTTCCTCCTCCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: ITIKQFFLIHFLSSS*CRWFFFFPFLLLLI
Trigger: AATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAGGAAATGGATGAGGAAGAACTGCTTAATGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CAA 90 bp GCTAATGAAGTTGATTTGGAAGTAGGGGAGGTGAGATGGGGTTTGTaGGAATGCAATGGGAGAGGCCCTAGGAAGACTTGTTCTAGTAGA +
Preference number: 6 (lower is better)
Translates to: ANEVDLEVGEVRWGL*ECNGRGPRKTCSSR
Trigger: TCTACTAGAACAAGTCTTCCTAGGGCCTCTCCCATTGCATTCCAACAAACCCCATCTCACCTCCCCTACTTCCAAATCAACTTCATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 90 bp AAGGCTAATGAAGTTGATTTGGAAGTAGGGGAGGTGAGATGGGGTTaGTTGGAATGCAATGGGAGAGGCCCTAGGAAGACTTGTTCTAGT +
Preference number: 6 (lower is better)
Translates to: KANEVDLEVGEVRWG*LECNGRGPRKTCSS
Trigger: ACTAGAACAAGTCTTCCTAGGGCCTCTCCCATTGCATTCCAACAAACCCCATCTCACCTCCCCTACTTCCAAATCAACTTCATTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS TCA 72 bp GGCCTCAGAGACAGAACTTTGTTAGAGGTCCTAACATaGCAACACTCTTCCATTGTCAATGCTTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: GLRDRTLLEVLT*QHSSIVNASSL
Trigger: GAGGGAGGAAGCATTGACAATGGAAGAGTGTTGTCATGTTAGGACCTCTAACAAAGTTCTGTCTCTGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp CCTGATATTAAATACCATTTCCTTTCCTCCTCCTTGTaGAGGTGGTTCTTCTTCTTCCCCTTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PDIKYHFLSSSL*RWFFFFPFLLL
Trigger: GAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAGGAAATGGTATTTAATATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS CCA 72 bp ACAATGGAGGAATTAAAGGTATCCCGTTTTCTCCAATaGCCCATGCCACACTATGAGACACTTTCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: TMEELKVSRFLQ*PMPHYETLSLR
Trigger: CCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGATACCTTTAATTCCTCCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS CCA 72 bp GGACTGTGGGCCTGGAATAGAGAGAGAGGTTTTGCATaGATTTATGTGGGTGTAGCCTCCTTTCTATATGTG +
Preference number: 6 (lower is better)
Translates to: GLWAWNRERGFA*IYVGVASFLYV
Trigger: CACATATAGAAAGGAGGCTACACCCACATAAATCCATGCAAAACCTCTCTCTCTATTCCAGGCCCACAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS TCA 72 bp CAGTTGACTATTTGCAAATTGAAAATCTGCCCAAAGTaGACTCGGAAGTCTGCTCCTAGTGGCCGACTGACT +
Preference number: 6 (lower is better)
Translates to: QLTICKLKICPK*TRKSAPSGRLT
Trigger: AGTCAGTCGGCCACTAGGAGCAGACTTCCGAGTTCACTTTGGGCAGATTTTCAATTTGCAAATAGTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS GCA 72 bp GATCCTACTGCATGGATTGTTAAAACTTACTCTAGCTaGTGCTTATCCAAGGAAGAGAAGCCATGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: DPTAWIVKTYSS*CLSKEEKPCSG
Trigger: GCCAGAGCATGGCTTCTCTTCCTTGGATAAGCAGCAGCTAGAGTAAGTTTTAACAATCCATGCAGTAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 90 bp CCTCATTACCATCCTGATATTAAATACCATTTCCTTTCCTCCTCCTaGTGCAGGTGGTTCTTCTTCTTCCCCTTCCTCCTCCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: PHYHPDIKYHFLSSS*CRWFFFFPFLLLLI
Trigger: AATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAGGAAATGGTATTTAATATCAGGATGGTAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS TCA 72 bp TGTCCAGTTGGAAATTTCCAGGAGGGTCTCCAGATCTaGTCACATGCTGACTACTGTGAACGTATTTTACAG +
Preference number: 6 (lower is better)
Translates to: CPVGNFQEGLQI*SHADYCERILQ
Trigger: CTGTAAAATACGTTCACAGTAGTCAGCATGTGATCAGATCTGGAGACCCTCCTGGAAATTTCCAACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 72 bp ATTAAATACCATTTCCTTTCCTCCTCCTTGTGCAGGTaGTTCTTCTTCTTCCCCTTCCTCCTCCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: IKYHFLSSSLCR*FFFFPFLLLLI
Trigger: AATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGGAAAGGAAATGGTATTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514450.3
CDS CCA 72 bp AGGAGACCAAGAGACTTAATCACAGAAAAGGTCATGTaGCCTGCACAAGACCACCAGTATGGGAAATTATCT +
Preference number: 6 (lower is better)
Translates to: RRPRDLITEKVM*PAQDHQYGKLS
Trigger: AGATAATTTCCCATACTGGTGGTCTTGTGCAGGCCACATGACCTTTTCTGTGATTAAGTCTCTTGGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp TCTGCTTTCTTCAAAGCACTCCGAAATCCGATGTTCTaGTGTGACAATGGAGGAATTAAAGGTATCCCGTTT +
Preference number: 6 (lower is better)
Translates to: SAFFKALRNPMF*CDNGGIKGIPF
Trigger: AAACGGGATACCTTTAATTCCTCCATTGTCACAGCAGAACATCGGATTTCGGAGTGCTTTGAAGAAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512202.1
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS CCA 72 bp TGGCTACTATGGCCCTATGGGTGTCTATGTGTTCCTTaGTTTCTATTACATTTCTGTCTCGTAACCGTTTCT +
Preference number: 6 (lower is better)
Translates to: WLLWPYGCLCVP*FLLHFCLVTVS
Trigger: AGAAACGGTTACGAGACAGAAATGTAATAGAAACCAAGGAACACATAGACACCCATAGGGCCATAGTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000675768.1
ENST00000676337.1
ENST00000680586.1
CDS CCA 72 bp CTAGAAATTCTCCCAAATGGGCGAGATCCTACTGCATaGATTGTTAAAACTTACTCTAGCTGCTGCTTATCC +
Preference number: 6 (lower is better)
Translates to: LEILPNGRDPTA*IVKTYSSCCLS
Trigger: GGATAAGCAGCAGCTAGAGTAAGTTTTAACAATCCATGCAGTAGGATCTCGCCCATTTGGGAGAATTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 72 bp TTGGCTACTATGGCCCTATGGGTGTCTATGTGTTCCTaGGTTTCTATTACATTTCTGTCTCGTAACCGTTTC +
Preference number: 6 (lower is better)
Translates to: LATMALWVSMCS*VSITFLSRNRF
Trigger: GAAACGGTTACGAGACAGAAATGTAATAGAAACCAAGGAACACATAGACACCCATAGGGCCATAGTAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000675768.1
ENST00000676337.1
ENST00000680586.1
CDS CAA 72 bp GCACTTAGTAGATGTCCTAAAATGGTAACTATTGGGTaGATGCCAGTGATTAAGGTGGAAGAAGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: ALSRCPKMVTIG*MPVIKVEEEEE
Trigger: CTCCTCCTCTTCTTCCACCTTAATCACTGGCATCAACCCAATAGTTACCATTTTAGGACATCTACTAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 72 bp AAATTCTCCCAAATGGGCGAGATCCTACTGCATGGATaGTTAAAACTTACTCTAGCTGCTGCTTATCCAAGG +
Preference number: 6 (lower is better)
Translates to: KFSQMGEILLHG*LKLTLAAAYPR
Trigger: CCTTGGATAAGCAGCAGCTAGAGTAAGTTTTAACAATCCATGCAGTAGGATCTCGCCCATTTGGGAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp ACCAAGAGACTTAATCACAGAAAAGGTCATGTGGCCTaGACAAGACCACCAGTATGGGAAATTATCTTTCAT +
Preference number: 6 (lower is better)
Translates to: TKRLNHRKGHVA*TRPPVWEIIFH
Trigger: ATGAAAGATAATTTCCCATACTGGTGGTCTTGTGCAGGCCACATGACCTTTTCTGTGATTAAGTCTCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CCA 72 bp TTACAAAAGGCACTTTGCAGATTCTGCATTCTAGGATaGAAGTGGAGAGAGACGGTGCTGTTGAATCTTTTA +
Preference number: 6 (lower is better)
Translates to: LQKALCRFCILG*KWRETVLLNLL
Trigger: TAAAAGATTCAACAGCACCGTCTCTCTCCACTTCCATCCTAGAATGCAGAATCTGCAAAGTGCCTTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000424120.6
ENST00000503292.6
ENST00000507954.5
ENST00000511544.6
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000515124.6
ENST00000676337.1
CDS CAA 72 bp AGGAAACCCAAGGAAGTTCCAGGATTCCAGGAGCTGTaGTTCCTGTTTATTCTCCAAGGTTTTACACAAAAT +
Preference number: 6 (lower is better)
Translates to: RKPKEVPGFQEL*FLFILQGFTQN
Trigger: ATTTTGTGTAAAACCTTGGAGAATAAACAGGAACAACAGCTCCTGGAATCCTGGAACTTCCTTGGGTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS CAA 90 bp GTCCTGGAATACCTTTTCCATAATTTCTCGGTCATAGACTGGAACTaGCTTATAATTTCGGAATTCTGGCACCTCTTGGCTTCTAAGATG +
Preference number: 6 (lower is better)
Translates to: VLEYLFHNFSVIDWN*LIISEFWHLLASKM
Trigger: CATCTTAGAAGCCAAGAGGTGCCAGAATTCCGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAAATTATGGAAAAGGTATTCCAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS TCA 72 bp CTTGATTTTTCGTGCAGAATCATGGAACTTGACTCTTaGGTAACTTTGGGAGTCAACTTCTTGTTGAGTCCT +
Preference number: 6 (lower is better)
Translates to: LDFSCRIMELDS*VTLGVNFLLSP
Trigger: AGGACTCAACAAGAAGTTGACTCCCAAAGTTACTCAAGAGTCAAGTTCCATGATTCTGCACGAAAAATCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000514450.3
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CCA 72 bp CTGGAATACCTTTTCCATAATTTCTCGGTCATAGACTaGAACTTGCTTATAATTTCGGAATTCTGGCACCTC +
Preference number: 6 (lower is better)
Translates to: LEYLFHNFSVID*NLLIISEFWHL
Trigger: GAGGTGCCAGAATTCCGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAAATTATGGAAAAGGTATTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS CAA 72 bp CTTAAAGCTTGGAGCTTATCAGTAAGAAATTTCGCCTaGTTTCTCTGGTGTCTTGCAAGGTACTGGTCATAT +
Preference number: 6 (lower is better)
Translates to: LKAWSLSVRNFA*FLWCLARYWSY
Trigger: ATATGACCAGTACCTTGCAAGACACCAGAGAAACAAGGCGAAATTTCTTACTGATAAGCTCCAAGCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CAA 72 bp TACCTTTTCCATAATTTCTCGGTCATAGACTGGAACTaGCTTATAATTTCGGAATTCTGGCACCTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: YLFHNFSVIDWN*LIISEFWHLLA
Trigger: AGCCAAGAGGTGCCAGAATTCCGAAATTATAAGCAAGTTCCAGTCTATGACCGAGAAATTATGGAAAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000634028.2
ENST00000650860.2
ENST00000674945.1
ENST00000675619.1
ENST00000676337.1
ENST00000680586.1
CDS GCA 72 bp AGAAGAGAAATAGCCAATAAAAACAGCAGTAGTGTGTaGTCACGCTCAGATAATCAGTCCATGTTGTTAGTA +
Preference number: 6 (lower is better)
Translates to: RREIANKNSSSV*SRSDNQSMLLV
Trigger: TACTAACAACATGGACTGATTATCTGAGCGTGAGCACACACTACTGCTGTTTTTATTGGCTATTTCTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512202.1
CDS CCA 72 bp CTCAAAACAAGTTTCAAGGGAGTATTTGTAAATCTCTaGAACTCTCGAAGGGATTTCATCTCTTTCCAAACT +
Preference number: 6 (lower is better)
Translates to: LKTSFKGVFVNL*NSRRDFISFQT
Trigger: AGTTTGGAAAGAGATGAAATCCCTTCGAGAGTTCCAGAGATTTACAAATACTCCCTTGAAACTTGTTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000389652.11
ENST00000424120.6
ENST00000503292.6
ENST00000506643.5
ENST00000510220.1
ENST00000512702.6
ENST00000513811.5
ENST00000634028.2
ENST00000650860.2
ENST00000651385.1
ENST00000674945.1
ENST00000676337.1
CDS CAA 72 bp GCTGAACACATGAAGGACAGATATTTTGCTGCGTGCTaGGCATATATTATCTCTAATTTTAGCAGTAATGCT +
Preference number: 6 (lower is better)
Translates to: AEHMKDRYFAAC*AYIISNFSSNA
Trigger: AGCATTACTGCTAAAATTAGAGATAATATATGCCAAGCACGCAGCAAAATATCTGTCCTTCATGTGTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675768.1
CDS TCA 72 bp ATCTTTTCTATATCCACACCCCTAGTTGAAGCCATTTaGCAATTATCCAAACTAATGAGTCAATCAAGCAAA +
Preference number: 6 (lower is better)
Translates to: IFSISTPLVEAI*QLSKLMSQSSK
Trigger: TTTGCTTGATTGACTCATTAGTTTGGATAATTGTCAAATGGCTTCAACTAGGGGTGTGGATATAGAAAAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675619.1
ENST00000680586.1
CDS GCA 72 bp TTTGCTGAACACATGAAGGACAGATATTTTGCTGCGTaGTTGGCATATATTATCTCTAATTTTAGCAGTAAT +
Preference number: 6 (lower is better)
Translates to: FAEHMKDRYFAA*LAYIISNFSSN
Trigger: ATTACTGCTAAAATTAGAGATAATATATGCCAAGCACGCAGCAAAATATCTGTCCTTCATGTGTTCAGCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675768.1