RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CC2D1B (Homo sapiens)

Ensembl gene IDs: ENSG00000154222

Ensembl transcript IDs: ENST00000284376.8, ENST00000371586.6, ENST00000438021.5, ENST00000450942.2, ENST00000460261.5, ENST00000460370.1, ENST00000470844.5, ENST00000485966.1, ENST00000491136.6, ENST00000494789.1

Found 638 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTaGAGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCC +
Preference number: 1 (lower is better)
Translates to: SWGDGVVWDRLPLAH*SHGTLTPPSAGEVP
Trigger: GGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR TCA 90 bp TTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTaGCACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTC +
Preference number: 1 (lower is better)
Translates to: LSGTGYHWPTGVTEP*HHPQQGRFPITLKF
Trigger: GAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR TCA 90 bp CTAGTGCAGCAGCTGTCAGGGATAAAGGCACAGGCAGAGCTGGGGTaGCGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCA +
Preference number: 1 (lower is better)
Translates to: LVQQLSGIKAQAELG*RSCLGQATTGPLES
Trigger: TGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGTGCCTTTATCCCTGACAGCTGCTGCACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR TCA 90 bp GAAGCCAGCAAAGCTGGGAAAGTCATCTCCTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGGCCATCGGCTACACAGGGGTGCAAA +
Preference number: 1 (lower is better)
Translates to: EASKAGKVISCTVAA*LLSWCWPSATQGCK
Trigger: TTTGCACCCCTGTGTAGCCGATGGCCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCAGGAGATGACTTTCCCAGCTTTGCTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371586.6
3UTR TCA 90 bp TGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATaGAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGC +
Preference number: 1 (lower is better)
Translates to: CVPPVSCMWINLRTR*SWDRLLLLPVTHAC
Trigger: GCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 90 bp AGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTTTaGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGG +
Preference number: 1 (lower is better)
Translates to: SWDRLLLLPVTHACL*LQQRPFKNFNLQVW
Trigger: CCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 90 bp TCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCAGCCTaGAGGTTCTGTTTTGAAAGAGCAAAGCAGCAGACTGAAATTGAA +
Preference number: 1 (lower is better)
Translates to: SISKSGGRLCLASSA*RFCFERAKQQTEIE
Trigger: TTCAATTTCAGTCTGCTGCTTTGCTCTTTCAAAACAGAACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR GCA 90 bp CCCCCAAAAGGACACATACAAAGCTCAGTTCTTGAGCTGTGCTTATaGAATACTATAGTGATCAGTAAGCTGAATGTATTTGCTTCACTT +
Preference number: 1 (lower is better)
Translates to: PPKGHIQSSVLELCL*NTIVISKLNVFASL
Trigger: AAGTGAAGCAAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCCTTTTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR GCA 90 bp TGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTCTTGAGCTGTaGTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTGCT +
Preference number: 1 (lower is better)
Translates to: CYPPKGHIQSSVLEL*LCNTIVISKLNVFA
Trigger: AGCAAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR TCA 90 bp ATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTaGCTGCAATTAAGTGTTAAATCTCACATCTGTGGAAGTTTTGGT +
Preference number: 1 (lower is better)
Translates to: ITLLFILDYCCVAYT*LQLSVKSHICGSFG
Trigger: ACCAAAACTTCCACAGATGTGAGATTTAACACTTAATTGCAGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR TCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAATGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: GVTELSGTGYHWPTGVTECTVAA*LLSWCW
Trigger: CCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCA...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTGGGGAGATGGGCTCCTaGAACCCAGCCTGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSGEMGS*NPACFC
Trigger: ACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCC...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR GCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCGAATGGAAGTGTCCTTaGCCTCTTCCAGACTCGGGG +
Preference number: 2 (lower is better)
Translates to: SCLGQATTGPLESRNPDTEWKCP*PLPDSG
Trigger: CCCCGAGTCTGGAAGAGGGCAAGGACACTTCCATTC...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR GCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACAGGGGTTAAGGGGCTaGAGGACTCCATGGTACAGA +
Preference number: 2 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPQGLRG*RTPWYR
Trigger: TCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTG...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGTGACGGAGTTGTCTaGGACAGGCTACCACTGGCC +
Preference number: 2 (lower is better)
Translates to: SRSGATGGRGKLYTVATQGDGVV*DRLPLA
Trigger: GGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR GCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGTTAACAGGTCTTTGGTaGTTGGGTAGCAGCATCTCT +
Preference number: 2 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGLTGLW*LGSSIS
Trigger: AGAGATGCTGCTACCCAAGCACCAAAGACCTGTTAA...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTTGCTTAACAGGTCTTTaGTGCTTGGGTAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTCLTGL*CLGSSI
Trigger: GATGCTGCTACCCAAGCACCAAAGACCTGTTAAGCA...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGCTACCACTGGCCCACTaGAGTCACGGAACCCTGACA +
Preference number: 2 (lower is better)
Translates to: SRSGATGGRGKLYTVATQLPLAH*SHGTLT
Trigger: TGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAG...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTGCACTCCAGCCTGGCTaGCAGAGAGCTACTCTGTCT +
Preference number: 2 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPALQPG*QRATLS
Trigger: AGACAGAGTAGCTCTCTGCCAGCCAGGCTGGAGTGC...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCGAAAGACCAGAGTCGTaGTCAGTAGTGCACATGCTT +
Preference number: 2 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPERPES*SVVHML
Trigger: AAGCATGTGCACTACTGACCACGACTCTGGTCTTTC...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR TCA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCCAGGCAGAGCTGGGGTaGCGGAGTTGTCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVQAELG*RSCLGQ
Trigger: CTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTG...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR GCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAATTAACAGGTCTTTGGTaGTTGGGTAGCAGCATCTCT +
Preference number: 2 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQLTGLW*LGSSIS
Trigger: AGAGATGCTGCTACCCAAGCACCAAAGACCTGTTAA...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp TTGGGTTGTAGCTGGCTCCCAACTGCAGGTGAGTCACTAATCTCCAATGTTTGGGGGACAGGCTACCACTaGCCCACTGGAGTCACGGAA +
Preference number: 2 (lower is better)
Translates to: LGCSWLPTAGESLISNVWGTGYH*PTGVTE
Trigger: TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCC...CCAAACATTGGAGATTAGTGACTCACCTGCAGTTGGGAGCCAGCTACAACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp AGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCAGGCACAGGCAGAGCTaGGGTGACGGAGTTGTCTGG +
Preference number: 2 (lower is better)
Translates to: RPFKNFNLQVWWEALSCLRHRQS*GDGVVW
Trigger: CCAGACAACTCCGTCACCCCAGCTCTGCCTGTGCCT...GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGCTTGAACCTGGGAGGTaGGGGTTGCAGCGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKLEPGR*GLQRAE
Trigger: CTCAGCTCGCTGCAACCCCCACCTCCCAGGTTCAAG...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR TCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAAGGGGGCAAAGGTTCTaGAGGCCCAGAGAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPRGQRF*RPRELP
Trigger: GGGCAGCTCTCTGGGCCTTCAGAACCTTTGCCCCCT...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371586.6
3UTR-3UTR CCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGGGGGAGATGGGCTCCTaGAACCCAGCCTGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKGEMGS*NPACFC
Trigger: ACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCC...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR GCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGCTGAGATCATGCCACTaGACTCCAGCCTGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGLRSCH*TPAWLA
Trigger: TGCCAGCCAGGCTGGAGTGCAGTGGCATGATCTCAG...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR GCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGTGGGAGGCTTTGTCTTaGCTCGTCAGCCTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKWEALS*LVSLEV
Trigger: AACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCA...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAGGCACAGGCAGAGCTaGGGTGACGGAGTTGTCTGG +
Preference number: 2 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSRHRQS*GDGVVW
Trigger: CCAGACAACTCCGTCACCCCAGCTCTGCCTGTGCCT...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR CAA 90 bp CTGGTGGGAGGCTTTGTCTTGCCTCGTCAGCCTGGAGGTTCTGTTTaGAAAGAGCAAAGCAGCAGACTGAAATTGAATGGGTTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LVGGFVLPRQPGGSV*KEQSSRLKLNGLQR
Trigger: CCTTTGCAACCCATTCAATTTCAGTCTGCTGCTTTGCTCTTTCAAAACAGAACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR GCA 90 bp TTGGGTTGTAGCTGGCTCCCAACTGCAGGTGAGTCACTAATCTCCAATGTTTGGCCAGTGACGCATGCATaGCTTTGGCTACAACAAAGG +
Preference number: 2 (lower is better)
Translates to: LGCSWLPTAGESLISNVWPVTHA*LWLQQR
Trigger: CCTTTGTTGTAGCCAAAGGCATGCATGCGTCACTGG...CCAAACATTGGAGATTAGTGACTCACCTGCAGTTGGGAGCCAGCTACAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTCTCCTCTCCTGGTGCTaGCCATCGGCTACACAGGGG +
Preference number: 2 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTLLSWC*PSATQG
Trigger: CCCCTGTGTAGCCGATGGCCAGCACCAGGAGAGGAG...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371586.6
3UTR-3UTR GCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCGAATGGAAGTGTCCTTaGCCTCTTCCAGACTCGGGG +
Preference number: 2 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSEWKCP*PLPDSG
Trigger: CCCCGAGTCTGGAAGAGGGCAAGGACACTTCCATTC...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR GCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTCCAGTCACCTTTCTTTaGTCTATAGGTCATCTTATG +
Preference number: 2 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPPVTFL*SIGHLM
Trigger: CATAAGATGACCTATAGAGCAAAGAAAGGTGACTGG...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR TCA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: VLELCLCNTIVISKLNVFCTVAA*LLSWCW
Trigger: CCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCA...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR TCA 90 bp TCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACTCTTCCCAGTTCTACTaGGGAACATCAGAAACTCAG +
Preference number: 2 (lower is better)
Translates to: SFKGTSRSGATGGRGKLYSSQFY*GTSETQ
Trigger: CTGAGTTTCTGATGTTCCTCAGTAGAACTGGGAAGA...GTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371586.6
3UTR-3UTR GCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCATCGGCTACACAGGGGTaGAAAGCACAAGAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPSATQG*KAQEVS
Trigger: ACTGACTTCTTGTGCTTTGCACCCCTGTGTAGCCGA...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371586.6
3UTR-3UTR CCA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCGAAAGACCAGAGTCGTaGTCAGTAGTGCACATGCTT +
Preference number: 2 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFERPES*SVVHML
Trigger: AAGCATGTGCACTACTGACCACGACTCTGGTCTTTC...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCTGCTTAACAGGTCTTTaGTGCTTGGGTAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSCLTGL*CLGSSI
Trigger: GATGCTGCTACCCAAGCACCAAAGACCTGTTAAGCA...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTGAAAGACCAGAGTCGTaGTCAGTAGTGCACATGCTT +
Preference number: 2 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGERPES*SVVHML
Trigger: AAGCATGTGCACTACTGACCACGACTCTGGTCTTTC...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CCA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTGGTGACGGAGTTGTCTaGGACAGGCTACCACTGGCC +
Preference number: 2 (lower is better)
Translates to: VLELCLCNTIVISKLNVFGDGVV*DRLPLA
Trigger: GGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp AAATCTCTTACAACTACAAACCCCTTCATAGTCTCCATCCATTCAGAAAAACAAGGGGAGATGGGCTCCTaGAACCCAGCCTGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: KSLTTTNPFIVSIHSEKQGEMGS*NPACFC
Trigger: ACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCC...TTGTTTTTCTGAATGGATGGAGACTATGAAGGGGTTTGTAGTTGTAAGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGATTAGGACTTTGGTaGATACTCTGTATAGTTGAG +
Preference number: 2 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGRLGLW*ILCIVE
Trigger: CTCAACTATACAGAGTATCCACCAAAGTCCTAATCT...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 72 bp GACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTaGAGTCACGGAACCCTGACACCACCCTCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: DGVVWDRLPLAH*SHGTLTPPSAG
Trigger: CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR TCA 72 bp CAGCTGTCAGGGATAAAGGCACAGGCAGAGCTGGGGTaGCGGAGTTGTCTGGGACAGGCTACCACTGGCCCA +
Preference number: 3 (lower is better)
Translates to: QLSGIKAQAELG*RSCLGQATTGP
Trigger: TGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGTGCCTTTATCCCTGACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR GCA 72 bp GCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTaGCCTCTTCCAGACTCGGGGCAGGGGGAGACAGCG +
Preference number: 3 (lower is better)
Translates to: AGLHGTEEWKCP*PLPDSGQGETA
Trigger: CGCTGTCTCCCCCTGCCCCGAGTCTGGAAGAGGGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR TCA 72 bp AAAGCTGGGAAAGTCATCTCCTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGGCCATCGGCTACACAG +
Preference number: 3 (lower is better)
Translates to: KAGKVISCTVAA*LLSWCWPSATQ
Trigger: CTGTGTAGCCGATGGCCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCAGGAGATGACTTTCCCAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371586.6
3UTR-3UTR CAA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTGTGGGAGGCTTTGTCTaGCCTCGTCAGCCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPVGGFV*PRQPGG
Trigger: ACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCAC...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 72 bp GTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATaGTACAGAGGAATGGAAGTGTCCTTGCCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: VATQGLRGCRTP*YRGMEVSLPSS
Trigger: GGAAGAGGGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CAA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGTCTTTGGTGCTaGGGTAGCAGCATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTTGLWC*GSSISY
Trigger: ATAAGAGATGCTGCTACCCAAGCACCAAAGACCTGT...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR GCA 72 bp AAGCTGTACACAGTTGCCACGCAGGGGTTAAGGGGCTaGAGGACTCCATGGTACAGAGGAATGGAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: KLYTVATQGLRG*RTPWYRGMEVS
Trigger: GGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTGTACAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR GCA 72 bp CTCCTCTCCTGGTGCTGGCCATCGGCTACACAGGGGTaGAAAGCACAAGAAGTCAGTCTAAACTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: LLSWCWPSATQG*KAQEVSLNCSE
Trigger: TTCACTGCAGTTTAGACTGACTTCTTGTGCTTTGCACCCCTGTGTAGCCGATGGCCAGCACCAGGAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371586.6
3UTR CCA 72 bp CCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTaGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTG +
Preference number: 3 (lower is better)
Translates to: PQRGQQQERPES*SVVHMLNRSLV
Trigger: CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
3UTR-3UTR CAA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGGTGGGAGGCTTTGTCTaGCCTCGTCAGCCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKVGGFV*PRQPGG
Trigger: ACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCAC...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 72 bp GCACTGGGTTGGATACACACCCTAAGGGGAGTAGGTTaGGTTAGGAACCCTTCCAGTCACCTTTCTTTGCTC +
Preference number: 3 (lower is better)
Translates to: ALGWIHTLRGVG*VRNPSSHLSLL
Trigger: GAGCAAAGAAAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCAACCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CAA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTCACTTCTGATAAGATaGGCCAGCCGGGTGCGGTGG +
Preference number: 3 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLSLLIR*ASRVRW
Trigger: CCACCGCACCCGGCTGGCCAATCTTATCAGAAGTGA...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CAA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTACAGGTCTTTGGTGCTaGGGTAGCAGCATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSTGLWC*GSSISY
Trigger: ATAAGAGATGCTGCTACCCAAGCACCAAAGACCTGT...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CAA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTCCTGGGAGGTGGGGGTaGCAGCGAGCTGAGATCATG +
Preference number: 3 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTPGRWG*QRAEIM
Trigger: CATGATCTCAGCTCGCTGCAACCCCCACCTCCCAGG...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR TCA 72 bp CCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATaGAGCTGGGACAGGCTCCTCCTACTACCAGTGACG +
Preference number: 3 (lower is better)
Translates to: PVSCMWINLRTR*SWDRLLLLPVT
Trigger: CGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR GCA 72 bp TGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATaGCTTTGGCTACAACAAAGGCCTTTTAAGAACTTC +
Preference number: 3 (lower is better)
Translates to: WDRLLLLPVTHA*LWLQQRPFKNF
Trigger: GAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR-3UTR CAA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTTACAAAGCTCAGTTCTaGAGCTGTGCTTATGCAATA +
Preference number: 3 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLYKAQF*SCAYAI
Trigger: TATTGCATAAGCACAGCTCAAGAACTGAGCTTTGTA...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 72 bp AGGCTCCTCCTACTACCAGTGACGCATGCATGCCTTTaGCTACAACAAAGGCCTTTTAAGAACTTCAATCTC +
Preference number: 3 (lower is better)
Translates to: RLLLLPVTHACL*LQQRPFKNFNL
Trigger: GAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 72 bp AGTGACAGGGAGCAGGACTTTAGATTAGGACTTTGGTaGATACTCTGTATAGTTGAGTATAAAATCCCTACA +
Preference number: 3 (lower is better)
Translates to: SDREQDFRLGLW*ILCIVEYKIPT
Trigger: TGTAGGGATTTTATACTCAACTATACAGAGTATCCACCAAAGTCCTAATCTAAAGTCCTGCTCCCTGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR GCA 72 bp CCAAAAGGACACATACAAAGCTCAGTTCTTGAGCTGTaGTTATGCAATACTATAGTGATCAGTAAGCTGAAT +
Preference number: 3 (lower is better)
Translates to: PKGHIQSSVLEL*LCNTIVISKLN
Trigger: ATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCCTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CCA 72 bp AAAAGTGACAGGGAGCAGGACTTTAGATTAGGACTTTaGTGGATACTCTGTATAGTTGAGTATAAAATCCCT +
Preference number: 3 (lower is better)
Translates to: KSDREQDFRLGL*WILCIVEYKIP
Trigger: AGGGATTTTATACTCAACTATACAGAGTATCCACCAAAGTCCTAATCTAAAGTCCTGCTCCCTGTCACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR GCA 72 bp GGACACATACAAAGCTCAGTTCTTGAGCTGTGCTTATaGAATACTATAGTGATCAGTAAGCTGAATGTATTT +
Preference number: 3 (lower is better)
Translates to: GHIQSSVLELCL*NTIVISKLNVF
Trigger: AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR TCA 72 bp CTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTaGCTGCAATTAAGTGTTAAATCTCACATCTGTGGA +
Preference number: 3 (lower is better)
Translates to: LFILDYCCVAYT*LQLSVKSHICG
Trigger: TCCACAGATGTGAGATTTAACACTTAATTGCAGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGCGCGCTCGCAGCGCCTaGCTTTGGCTGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGRARSA*LWLLRL
Trigger: CAGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCG...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCCACCACTCCGGGCCTaGATGCCCGCCTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTPPLRA*MPASRY
Trigger: GTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGG...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCACCACTCCGGGCCTaGATGCCCGCCTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEPPLRA*MPASRY
Trigger: GTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGG...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAAGGCAGGCGCTGGGATaGAGGGACTGTGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSRQALG*RDCGPC
Trigger: GCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCT...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGCTCCAGGTCCTGGCTaGGCTTGGCCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRAPGPG*AWPAGL
Trigger: CAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGC...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGCTGGGGGCTCACCCTaGAGGTGCCCAGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQAGGSP*RCPGGS
Trigger: CGAGCCTCCTGGGCACCTGCAGGGTGAGCCCCCAGC...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR CCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCGGTCCTGGCTGCGCTTaGCCTGCAGGGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTGPGCA*PAGLPA
Trigger: AGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACC...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTCCACGGCTGGGGGAATaGCTGAGGGTGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTPRLGE*LRVLWE
Trigger: CTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGG...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTaGCACCACCCTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTGVTEP*HHPQQG
Trigger: CCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCC...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACACTCCGGGCCTGGATaGCCGCCTCGCGGTACTTGT +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEHSGPG*PPRGTC
Trigger: ACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTG...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGTCAGGGGCCATCACTaGCTGCACTCGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRVRGHH*LHSLHG
Trigger: GCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGAC...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGCACTGGGGCCTGTGCTaGGGGCTCACCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQHWGLC*GLTLVL
Trigger: GAGGACGAGGGTGAGCCCCCAGCACAGGCCCCAGTG...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000438021.5
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGCCCGCAGATAGGCTTTaGCCTGCTCCAGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGPADRL*PAPGPG
Trigger: GCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGG...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTCCTTGGCCTCTGGCCTaGGGGCCCTTCCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSPWPLA*GPFRGL
Trigger: AAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGG...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTTTGGGAGGGGTTGTCTaGCTCCAAGGCAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTLGGVV*LQGRGS
Trigger: GCTCCCCCTGCCTTGGAGTCAGACAACCCCTCCCAA...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCATTGGGAGGGGTTGTCTaGCTCCAAGGCAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSLGGVV*LQGRGS
Trigger: GCTCCCCCTGCCTTGGAGTCAGACAACCCCTCCCAA...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCATGCAGGGCTGCCCGCTaGTACTGCAGTTTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSCRAAR*YCSFRA
Trigger: GGCACGGAAACTGCAGTATCAGCGGGCAGCCCTGCA...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSCTVAA*LLSWCW
Trigger: CCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCA...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQCTVAA*LLSWCW
Trigger: CCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCA...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCGGAGTCACGGAACCCTaGCACCACCCTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPGVTEP*HHPQQG
Trigger: CCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCC...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCGCGCCTGGCTTTGGCTaGTTCGCCTGCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLAPGFG*FACLLG
Trigger: GCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGC...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCACATGCATCCGAGCCTTaGGCTCGTCCCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSHASEP*ARPHHS
Trigger: GGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATG...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGGCTCCAGGTCCTGGCTaGGCTTGGCCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGAPGPG*AWPAGL
Trigger: CAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGC...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAAGAGCCCCATCTGCTTaGCAGCGGCCACCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQRAPSA*QRPPLG
Trigger: GCCAAGGGGTGGCCGCTGCCAAGCAGATGGGGCTCT...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTCTTCGCCTGCCTCCTTaGCACTGGCCGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSLRLPP*HWPQPL
Trigger: GAGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAG...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCGCAGCGCCTGGCTTTaGCTGCTTCGCCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLRSAWL*LLRLPP
Trigger: AGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGCTGCG...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAGTCAGGGGCCATCACTaGCTGCACTCGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPVRGHH*LHSLHG
Trigger: GCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGAC...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTCTGTAGGGGCCACTaGGGTTGCTGGGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTLCRGH*GCWDVR
Trigger: CCTGACGTCCCAGCAACCCCAGTGGCCCCTACAGAG...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCGCCGTGCAGGTTTCTTaGCCACTGGGGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTAVQVS*PLGPVL
Trigger: CAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGC...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGGCTCAGGCAGGCGCTaGGATGAAGGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQGSGRR*DEGTVG
Trigger: GCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCC...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCACCCGCAGATAGGCTTTaGCCTGCTCCAGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSPADRL*PAPGPG
Trigger: GCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGG...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGATCGGGAGTCACCCCTaGAGGGGCTGGGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGIGSHP*RGWEVH
Trigger: ATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGAT...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGCTCCTCTCCTGGTGCTaGCCATCGGCTCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRLLSWC*PSAHKP
Trigger: GGGCTTGTGAGCCGATGGCCAGCACCAGGAGAGGAG...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284376.8
CDS-3UTR CCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTCCTCTCCTGGTGCTaGCCATCGGCTACACAGGGG +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTLLSWC*PSATQG
Trigger: CCCCTGTGTAGCCGATGGCCAGCACCAGGAGAGGAG...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGCTCCTCTCCTGGTGCTaGCCATCGGCTTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGLLSWC*PSASPP
Trigger: TGGAGGTGAAGCCGATGGCCAGCACCAGGAGAGGAG...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438021.5
CDS-3UTR TCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACAGCCCGCTTGGCACTaGGGGCAGCCACTTTGTACT +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEQPAWH*GQPLCT
Trigger: AGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTG...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTCTTCAGATCCTCAGGTaGCGGGGGCATGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTLQILR*RGHGTQ
Trigger: CTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAG...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTCACTCCGGGCCTGGATaGCCGCCTCGCGGTACTTGT +
Preference number: 4 (lower is better)
Translates to: PPSAGEVPDHPQVLPSHSHSGPG*PPRGTC
Trigger: ACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTG...ACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAATCCAGCAGTGCCAGCTaGTCCCGCACAGATGGACTC +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTESSSAS*SRTDGL
Trigger: GAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGA...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGCCGAGGTCTTGGCCCTaGCATCATGGCAGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGPRSWP*HHGSLD
Trigger: ATCTAGGCTGCCATGATGCCAGGGCCAAGACCTCGG...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCCAAGGCAGGGGGAGCTaGAGGGTCTGTCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTQGRGS*RVCLRA
Trigger: AGCCCTGAGACAGACCCTCCAGCTCCCCCTGCCTTG...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGAAATGCCAGGGAGGCTaGTCTCAGGTTGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGKCQGG*SQVGRG
Trigger: ACCCCTCCCAACCTGAGACCAGCCTCCCTGGCATTT...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTGCCGTGCAGGTTTCTTaGCCACTGGGGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSAVQVS*PLGPVL
Trigger: CAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGC...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATGGCTCAGGCAGGCGCTaGGATGAAGGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPPSAGEVPDHPQVLPSHGSGRR*DEGTVG
Trigger: GCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCC...ATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCCCCGCAGATAGGCTTTaGCCTGCTCCAGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPPADRL*PAPGPG
Trigger: GCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGG...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCAGGCACAGGCAGAGCTaGGGTGACGGAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTRHRQS*GDGVVW
Trigger: CCAGACAACTCCGTCACCCCAGCTCTGCCTGTGCCT...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACTTGAACCTGGGAGGTaGGGGTTGCAGCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTELEPGR*GLQRAE
Trigger: CTCAGCTCGCTGCAACCCCCACCTCCCAGGTTCAAG...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTGGCCTGCCCCTTGGGTaGTGGCTTCTTGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PPSAGEVPDHPQVLPSHSGLPLG*WLLACG
Trigger: ACCACAGGCAAGAAGCCAGCACCCAAGGGGCAGGCC...ACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGGGCCTGCCCCTTGGGTaGTGGCTTCTTGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGGLPLG*WLLACG
Trigger: ACCACAGGCAAGAAGCCAGCACCCAAGGGGCAGGCC...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp GGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTGCCCTCAGATCCACGGGCTaGCCCTTCTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GVKGLQDSMVQRNGSVLALRSTG*PFSRAS
Trigger: GGAGGCCCTGGAGAAGGGGCAGCCCGTGGATCTGAG...GGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTCTCAGATCCACGGGCTaGCCCTTCTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVLRSTG*PFSRAS
Trigger: GGAGGCCCTGGAGAAGGGGCAGCCCGTGGATCTGAG...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGGCCATCACTGGCTaGACTCGCTCCACGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQGAITG*TRSTAG
Trigger: CCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCC...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCACTCCGGGCCTGGATaGCCGCCTCGCGGTACTTGT +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNHSGPG*PPRGTC
Trigger: ACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAATTGGCAATGCGCTCATaGATCCGAGCCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTELAMRS*IRALRS
Trigger: CGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAA...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCATCCAGCAGTGCCAGCTaGTCCCGCACAGATGGACTC +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPSSSAS*SRTDGL
Trigger: GAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGA...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGGCCACGTTGCCCTGGTaGATGAACTGCTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGATLPW*MNCLEN
Trigger: GTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGC...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCTGGGAGGTGGGGGTTaGAGCGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLLGGGG*SELRSC
Trigger: GCATGATCTCAGCTCGCTGCAACCCCCACCTCCCAG...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGTGGGAGGCTTTGTCTTaGCTCGTCAGCCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGWEALS*LVSLEV
Trigger: AACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCA...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCTTCGCCTGCCTCCTTaGCACTGGCCGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNLRLPP*HWPQPL
Trigger: GAGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTCTGTTGGCTGGTTCCTaGGGGGCCAGGGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVLLAGS*GARGRF
Trigger: AAAGCGGCCCCTGGCCCCCCAGGAACCAGCCAACAG...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTCAAGGCAGGGGGAGCTaGAGGGTCTGTCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPSAGEVPDHPQVLPSHSQGRGS*RVCLRA
Trigger: AGCCCTGAGACAGACCCTCCAGCTCCCCCTGCCTTG...ACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGCTCTGTAGGGGCCACTaGGGTTGCTGGGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGLCRGH*GCWDVR
Trigger: CCTGACGTCCCAGCAACCCCAGTGGCCCCTACAGAG...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCACCTCCTCCGCCTTCTaGGAGAGTCGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPTSSAF*ESRRSS
Trigger: TGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGT...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGACTCAAAGTGGTGGGTaGGAGGGTCGAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQTQSGG*EGRGPE
Trigger: CTCAGGGCCTCGACCCTCCCACCCACCACTTTGAGT...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAACTCAAAGTGGTGGGTaGGAGGGTCGAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPTQSGG*EGRGPE
Trigger: CTCAGGGCCTCGACCCTCCCACCCACCACTTTGAGT...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTTTCAACTCAAAGTGGTaGGTGGGAGGGTCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTFNSKW*VGGSRP
Trigger: GGGCCTCGACCCTCCCACCCACCACTTTGAGTTGAA...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAATTCAACTCAAAGTGGTaGGTGGGAGGGTCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEFNSKW*VGGSRP
Trigger: GGGCCTCGACCCTCCCACCCACCACTTTGAGTTGAA...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGGGACAGGCTACCACTaGCCCACTGGAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQGTGYH*PTGVTE
Trigger: TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCC...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCGGTGACGGAGTTGTCTaGGACAGGCTACCACTGGCC +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTGDGVV*DRLPLA
Trigger: GGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCACTGCACTCCAGCCTaGCTGGCAGAGAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTHCTPA*LAESYS
Trigger: AGAGTAGCTCTCTGCCAGCCAGGCTGGAGTGCAGTG...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGCTAGATACCTCGCGGTaGATCCGAGCCAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGLDTSR*IRAKPR
Trigger: CCGGGGTTTGGCTCGGATTCACCGCGAGGTATCTAG...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTTCTTCCCAATCCTCATaGGCTCTCGGGCACGGTCTA +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTSSQSS*ALGHGL
Trigger: TAGACCGTGCCCGAGAGCTCATGAGGATTGGGAAGA...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGATCCAGCACTGTCTGTaGCTCTGTAGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQIQHCL*LCRGHW
Trigger: CCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGAT...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAATCCAGCACTGTCTGTaGCTCTGTAGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPIQHCL*LCRGHW
Trigger: CCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGAT...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCATGCAGGGCTGCCCGCTaGTACTGCAGTTTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSACRAAR*YCSFRA
Trigger: GGCACGGAAACTGCAGTATCAGCGGGCAGCCCTGCA...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGCAGATCGGGCCTGGATaGTCTGAGCCTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRQIGPG*SEPQAI
Trigger: AATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTG...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCACAGATCGGGCCTGGATaGTCTGAGCCTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSQIGPG*SEPQAI
Trigger: AATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTG...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCAGGCAGAGCTGGGGTaGCGGAGTTGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNQAELG*RSCLGQ
Trigger: CTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCATCCTCCTACTACCAGTaGCGCATGCATGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSSSYYQ*RMHAFG
Trigger: GCCAAAGGCATGCATGCGTCACTGGTAGTAGGAGGA...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTGCCAGGGGGCAAAGGTTCTaGAGGCCCAGAGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GVKGLQDSMVQRNGSVLARGQRF*RPRELP
Trigger: GGGCAGCTCTCTGGGCCTTCAGAACCTTTGCCCCCT...GGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR GCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGCTTCAGCCTCATCCATaGCCAGCAGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRLQPHP*PAACPQ
Trigger: CTGAGGACATGCTGCTGGGCATGGATGAGGCTGAAG...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAACTCCGTCAGCAGCTCTaGATCTTCCTCCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQLRQQL*IFLQPF
Trigger: GAAGGGCTGGAGGAAGATGCAGAGCTGCTGACGGAG...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGTCAGGACGGCTGTCTaGACTGGAGGTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTVRTAV*TGGSVS
Trigger: AGACACTGAACCTCCAGTGCAGACAGCCGTCCTGAC...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGCAATGTCGCTGCCACTaGGTCCTCCTCAACACCCAT +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRQCRCH*VLLNTH
Trigger: ATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTG...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCACAGTTTCTCTGCAGCTaGCAATGTCGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSQFLCS*QCRCHC
Trigger: GCAGTGGCAGCGACATTGGCAGCTGCAGAGAAACTG...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACACTTGGCCTGCAGGGCTaGCCGCTGATACTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTLGLQG*PLILQF
Trigger: AAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAG...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCTGAGATCATGCCACTaGACTCCAGCCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLLRSCH*TPAWLA
Trigger: TGCCAGCCAGGCTGGAGTGCAGTGGCATGATCTCAG...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCTTGGCCCTGGCATCATaGCAGCCTAGATACCTCGCG +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTLALAS*QPRYLA
Trigger: CGCGAGGTATCTAGGCTGCCATGATGCCAGGGCCAA...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGCTCCTCAGAGCCGCCTaGGTCAGCTACCTCATCACC +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGLLRAA*VSYLIT
Trigger: GGTGATGAGGTAGCTGACCCAGGCGGCTCTGAGGAG...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGCTGTTGGCTGGTTCCTaGGGGGCCAGGGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQLLAGS*GARGRF
Trigger: AAAGCGGCCCCTGGCCCCCCAGGAACCAGCCAACAG...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAAGGCTGGTCTCAGGTTaGGAGGGGTTGTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPRLVSG*EGLSDS
Trigger: GGAGTCAGACAACCCCTCCCAACCTGAGACCAGCCT...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAAATGCCAGGGAGGCTaGTCTCAGGTTGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTKCQGG*SQVGRG
Trigger: ACCCCTCCCAACCTGAGACCAGCCTCCCTGGCATTT...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGAAGTCTGAAACGGGCTaGGCAGAAATGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRKSETG*AEMPGR
Trigger: CCTCCCTGGCATTTCTGCCCAGCCCGTTTCAGACTT...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTGGCCACTGGGGTTGCTaGGACGTCAGGGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPGHWGC*DVRGHH
Trigger: GTGATGGCCCCTGACGTCCCAGCAACCCCAGTGGCC...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCACTCCAGGCCAGGGATaGGGGGAAATCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPTPGQG*GEILEE
Trigger: TTCCTCCAGGATTTCCCCCCATCCCTGGCCTGGAGT...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAACCTCCTCCGCCTTCTaGGAGAGTCGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQETSSAF*ESRRSS
Trigger: TGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGT...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGTCTTCAACTCAAAGTaGTGGGTGGGAGGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRVFNSK*WVGGSR
Trigger: CCTCGACCCTCCCACCCACCACTTTGAGTTGAAGAC...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCGGGGAGATGGGCTCCTaGAACCCAGCCTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLGEMGS*NPACFC
Trigger: ACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCC...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAGGGGAGATGGGCTCCTaGAACCCAGCCTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPGEMGS*NPACFC
Trigger: ACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCC...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCAAGGGCAGGGAAGCATaGTCCAGCCCTGTTATCCCC +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPKGREA*SSPVIP
Trigger: GGGGATAACAGGGCTGGACCATGCTTCCCTGCCCTT...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACAGGCTGGAGTGCAGTaGTACAATCGAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEQAGVQ*YNRGSL
Trigger: CAGTGAGCCTCGATTGTACCACTGCACTCCAGCCTG...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTTTGGGAGGGGTTGTCTaGCTCCAAGGCAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPLGGVV*LQGRGS
Trigger: GCTCCCCCTGCCTTGGAGTCAGACAACCCCTCCCAA...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTCAGCCCGCTTGGCACTaGGGGCAGCCACTTTGTACT +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVQPAWH*GQPLCT
Trigger: AGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTG...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp ACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATCGGGCCTGGATGATCTaGGCCTCAAGCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: TPPSAGEVPDHPQVLPSHRAWMI*ASSHLA
Trigger: AGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCG...ATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCCAGCTTGTCGCTTCTaGAGAAGGACCCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTPACRF*RRTLCG
Trigger: TCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGG...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAATCCTCCTACTACCAGTaGCGCATGCATGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQSSYYQ*RMHAFG
Trigger: GCCAAAGGCATGCATGCGTCACTGGTAGTAGGAGGA...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAACACCTAAGACCTCCTaGAGCTCCGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQTPKTS*SSVSSS
Trigger: AGAGCTGCTGACGGAGCTGCAGGAGGTCTTAGGTGT...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGTTTGGCTGCTTCGCCTaGCTCCTTGGCACTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQFGCFA*LLGTGR
Trigger: GCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAA...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTCTCACAGAGGCTAGCTaGGACTCCAAGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSLTEAS*DSKVFR
Trigger: CCTGAAGACCTTGGAGTCGCAGCTAGCCTCTGTGAG...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGCTTCAGATCCTCAGGTaGCGGGGGCATGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: PVSVEPQRGQQQERPESWLQILR*RGHGTQ
Trigger: CTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAG...CCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTTACTTGTTCAGCCTCTaGTGCAGGGCATCCAGCACT +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTYLFSL*CRASST
Trigger: AGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTA...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTCATGCATCCGAGCCTTaGGCTCGTCCCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPHASEP*ARPHHS
Trigger: GGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATG...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGCAATGTCGCTGCCACTaGGTCCTCCTCAACACCCAT +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQQCRCH*VLLNTH
Trigger: ATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTG...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAACAGTTTCTCTGCAGCTaGCAATGTCGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQQFLCS*QCRCHC
Trigger: GCAGTGGCAGCGACATTGGCAGCTGCAGAGAAACTG...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATAGGGACTGTGGGCCGTaGAGGTTTCTTGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNRDCGP*RFLGHW
Trigger: CCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCT...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCCAGCAGTGCCAGCTaGTCCCGCACAGATGGACTC +
Preference number: 4 (lower is better)
Translates to: PVSVEPQRGQQQERPESWSSSAS*SRTDGL
Trigger: GAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGA...CCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAGCCACGTTGCCCTGGTaGATGAACTGCTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTATLPW*MNCLEN
Trigger: GTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGC...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGTTTCAGGTGTGCTGTaGCAACCAGCTTGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSVSGVL*QPACRF
Trigger: GAAGCGACAAGCTGGTTGGCACAGCACACCTGAAAC...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACTCCAGTTTCAGGTGTaGTGTGCCAACCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTELQFQV*CANQLV
Trigger: GACAAGCTGGTTGGCACAGCACACCTGAAACTGGAG...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGAATGGAAGTGTCCTTaGCCTCTTCCAGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQEWKCP*PLPDSG
Trigger: CCCCGAGTCTGGAAGAGGGCAAGGACACTTCCATTC...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGCAGGGGTTAAGGGGCTaGAGGACTCCATGGTACAGA +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQQGLRG*RTPWYR
Trigger: TCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTG...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTCTGGGAGGTGGGGGTTaGAGCGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVLGGGG*SELRSC
Trigger: GCATGATCTCAGCTCGCTGCAACCCCCACCTCCCAG...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGAGGCGCCGGCCACCATaGCCAGCTAATTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRRRRPP*PANCFC
Trigger: ACAAAAACAATTAGCTGGGCATGGTGGCCGGCGCCT...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTAAGTCTGAAACGGGCTaGGCAGAAATGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSKSETG*AEMPGR
Trigger: CCTCCCTGGCATTTCTGCCCAGCCCGTTTCAGACTT...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATGGGATGAAGGGACTGTaGGCCGTGCAGGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TPPSAGEVPDHPQVLPSHGMKGL*AVQVSW
Trigger: CCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCC...ATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGAGCCTCAAGCCATTTaGCTACCCGCAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQREPQAI*LPADRL
Trigger: AAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTC...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGAGGGCGAAGGCACCTTaGACAGATCAACAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQRAKAP*TDQQVC
Trigger: GCAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCT...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCGCTTCTCAAATCGGGTaGTCTCAGCCACGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLASQIG*SQPRCP
Trigger: AGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGC...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCGCTTCTCAAATCGGGTaGTCTCAGCCACGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPASQIG*SQPRCP
Trigger: AGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGC...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCGTCTTCAACTCAAAGTaGTGGGTGGGAGGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTVFNSK*WVGGSR
Trigger: CCTCGACCCTCCCACCCACCACTTTGAGTTGAAGAC...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAACTACCACTGGCCCACTaGAGTCACGGAACCCTGACA +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQELPLAH*SHGTLT
Trigger: TGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAG...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTGCCGGTGACGGAGTTGTCTaGGACAGGCTACCACTGGCC +
Preference number: 4 (lower is better)
Translates to: GVKGLQDSMVQRNGSVLAGDGVV*DRLPLA
Trigger: GGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC...GGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGATTTGGGTTGTAGCTaGCTCCCAACTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSDLGCS*LPTAGE
Trigger: CTCACCTGCAGTTGGGAGCCAGCTACAACCCAAATC...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTCCACGGCTGGGGGAATaGCTGAGGGTGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLPRLGE*LRVLWE
Trigger: CTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGG...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGGCTCGAATAGCATCTTaGTATTGCTTGGCAATGCGC +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGARIAS*YCLAMR
Trigger: GCGCATTGCCAAGCAATATCAAGATGCTATTCGAGC...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGCAATTCAGCAAAGTTaGCTTTCCGTCCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTAIQQS*LSVLLG
Trigger: ACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGC...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGAGGCAGGCGCTGGGATaGAGGGACTGTGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVRQALG*RDCGPC
Trigger: GCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCT...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTCGGGCCTGGATGATCTaGGCCTCAAGCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVRAWMI*ASSHLA
Trigger: AGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCG...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGCGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGRCPGA*TAWRTA
Trigger: TGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACG...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCAGCTTGTCGCTTCTaGAGAAGGACCCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLPACRF*RRTLCG
Trigger: TCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGG...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAACTTCAGCCTCATCCATaGCCAGCAGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQELQPHP*PAACPQ
Trigger: CTGAGGACATGCTGCTGGGCATGGATGAGGCTGAAG...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCATCCCGCATACAGTCTaGCGCCAACTTCTCGATGTG +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTIPHTV*RQLLDV
Trigger: CACATCGAGAAGTTGGCGGCAGACTGTATGCGGGAT...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACTCCGTCAGCAGCTCTaGATCTTCCTCCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALRQQL*IFLQPF
Trigger: GAAGGGCTGGAGGAAGATGCAGAGCTGCTGACGGAG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCACCGTCCTGCTCGGTGTaGTCGAATAGCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSPSCSV*SNSILI
Trigger: TATCAAGATGCTATTCGAGCACACCGAGCAGGACGG...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATAGCTGCCAATGTCGCTaGCACTGCGTCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNSCQCR*HCVLLN
Trigger: GTTGAGGAGGACGCAGTGGCAGCGACATTGGCAGCT...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGAGGGACTGTGGGCCGTaGAGGTTTCTTGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQRDCGP*RFLGHW
Trigger: CCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCT...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCTTGGCCTGCAGGGCTaGCCGCTGATACTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNLGLQG*PLILQF
Trigger: AAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCCTCCAGTTTCAGGTGTaGTGTGCCAACCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPLQFQV*CANQLV
Trigger: GACAAGCTGGTTGGCACAGCACACCTGAAACTGGAG...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCTGAGATCATGCCACTaGACTCCAGCCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNLRSCH*TPAWLA
Trigger: TGCCAGCCAGGCTGGAGTGCAGTGGCATGATCTCAG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAAGGCGCCGGCCACCATaGCCAGCTAATTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPRRRPP*PANCFC
Trigger: ACAAAAACAATTAGCTGGGCATGGTGGCCGGCGCCT...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCTGCCCCTTGGGTGCTaGCTTCTTGCCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNLPLGC*LLACGL
Trigger: CAAACCACAGGCAAGAAGCCAGCACCCAAGGGGCAG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGCTCCTCAGAGCCGCCTaGGTCAGCTACCTCATCACC +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQLLRAA*VSYLIT
Trigger: GGTGATGAGGTAGCTGACCCAGGCGGCTCTGAGGAG...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp ACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAAGTCTGAAACGGGCTaGGCAGAAATGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TPPSAGEVPDHPQVLPSHKSETG*AEMPGR
Trigger: CCTCCCTGGCATTTCTGCCCAGCCCGTTTCAGACTT...ATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTACTCCAGGCCAGGGATaGGGGGAAATCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVTPGQG*GEILEE
Trigger: TTCCTCCAGGATTTCCCCCCATCCCTGGCCTGGAGT...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTGGTCCTGGCTGCGCTTaGCCTGCAGGGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: QQQERPESWSVVHMLNRSGPGCA*PAGLPA
Trigger: AGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACC...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGACCTCCTCCGCCTTCTaGGAGAGTCGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQTSSAF*ESRRSS
Trigger: TGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGT...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTATCGGGAGTCACCCCTaGAGGGGCTGGGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPIGSHP*RGWEVH
Trigger: ATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGAT...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTCTACCACTGGCCCACTaGAGTCACGGAACCCTGACA +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVLPLAH*SHGTLT
Trigger: TGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAG...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTGCACTCCAGCCTGGCTaGCAGAGAGCTACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVALQPG*QRATLS
Trigger: AGACAGAGTAGCTCTCTGCCAGCCAGGCTGGAGTGC...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATTCTTCCCAATCCTCATaGGCTCTCGGGCACGGTCTA +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNSSQSS*ALGHGL
Trigger: TAGACCGTGCCCGAGAGCTCATGAGGATTGGGAAGA...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCGCAATTCAGCAAAGTTaGCTTTCCGTCCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTAIQQS*LSVLLG
Trigger: ACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGC...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACAGATCGGGCCTGGATaGTCTGAGCCTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSAQIGPG*SEPQAI
Trigger: AATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCTGTTTCTTGCGGTCCTaGGCAAGCTTCTCAAATCGG +
Preference number: 4 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLCFLRS*ASFSNR
Trigger: CCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACA...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTGTTTCTTGCGGTCCTaGGCAAGCTTCTCAAATCGG +
Preference number: 4 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSCFLRS*ASFSNR
Trigger: CCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACA...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTCCAGCTTGTCGCTTCTaGAGAAGGACCCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PPSAGEVPDHPQVLPSHSPACRF*RRTLCG
Trigger: TCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGG...ACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGGTAGTTCCCGCTCTGTaGCCCACTAAAAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PVSVEPQRGQQQERPESWVVPAL*PTKSSA
Trigger: CGCAGAGCTTTTAGTGGGTCACAGAGCGGGAACTAC...CCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTTTTGGCTGCTTCGCCTaGCTCCTTGGCACTGGCCGC +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLFGCFA*LLGTGR
Trigger: GCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAA...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGTACTTGTTCAGCCTCTaGTGCAGGGCATCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGYLFSL*CRASST
Trigger: AGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTA...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTCATGCATCCGAGCCTTaGGCTCGTCCCCACCACTCC +
Preference number: 4 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSHASEP*ARPHHS
Trigger: GGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATG...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGATATTGCTTGGCAATaGGCTCATGCATCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQDIAWQ*AHASEP
Trigger: AGGCTCGGATGCATGAGCGCATTGCCAAGCAATATC...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACACCGTCCTGCTCGGTGTaGTCGAATAGCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTPSCSV*SNSILI
Trigger: TATCAAGATGCTATTCGAGCACACCGAGCAGGACGG...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCAATGTCGCTGCCACTaGGTCCTCCTCAACACCCAT +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNQCRCH*VLLNTH
Trigger: ATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTAGCTGCCAATGTCGCTaGCACTGCGTCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPSCQCR*HCVLLN
Trigger: GTTGAGGAGGACGCAGTGGCAGCGACATTGGCAGCT...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp GGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTGCCAGAGGCCAGTTTCTCTaGAGCTGCCAATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GVKGLQDSMVQRNGSVLARGQFL*SCQCRC
Trigger: GCAGCGACATTGGCAGCTGCAGAGAAACTGGCCTCT...GGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTGCCCCCTGGTGCATGAACTaGTTGGAGAACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GVKGLQDSMVQRNGSVLAPWCMN*LENSRH
Trigger: GTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGG...GGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGCCACGTTGCCCTGGTaGATGAACTGCTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNATLPW*MNCLEN
Trigger: GTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGC...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCATCTCCAGCTGTTTCTTaGGGTCCTGAGCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPSPAVS*GPEQAS
Trigger: AGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGA...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGTCTCCAGCTGTTTCTTaGGGTCCTGAGCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQSPAVS*GPEQAS
Trigger: AGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGA...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGGTTTCAGGTGTGCTGTaGCAACCAGCTTGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGVSGVL*QPACRF
Trigger: GAAGCGACAAGCTGGTTGGCACAGCACACCTGAAAC...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTCTCCAGTTTCAGGTGTaGTGTGCCAACCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PPSAGEVPDHPQVLPSHSLQFQV*CANQLV
Trigger: GACAAGCTGGTTGGCACAGCACACCTGAAACTGGAG...ACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTAGGCTGGTCTCAGGTTaGGAGGGGTTGTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPRLVSG*EGLSDS
Trigger: GGAGTCAGACAACCCCTCCCAACCTGAGACCAGCCT...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGCAGGTGCCGGGGGCATaGCACTCAGATCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVQVPGA*HSDPRA
Trigger: AGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTG...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGACTCCAGGCCAGGGATaGGGGGAAATCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQTPGQG*GEILEE
Trigger: TTCCTCCAGGATTTCCCCCCATCCCTGGCCTGGAGT...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACCACTGGGGCCTGTGCTaGGGGCTCACCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SFKGTSRSGATGGRGKLYHWGLC*GLTLVL
Trigger: GAGGACGAGGGTGAGCCCCCAGCACAGGCCCCAGTG...GTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000438021.5
CDS-3UTR CCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAAGTCGCAGGTCCTCATaGTGGATGAGGATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPSRRSS*WMRMKS
Trigger: TGACTTCATCCTCATCCACCATGAGGACCTGCGACT...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCAGTCGCAGGTCCTCATaGTGGATGAGGATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPSRRSS*WMRMKS
Trigger: TGACTTCATCCTCATCCACCATGAGGACCTGCGACT...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCTTGATGCCTTTGCTCTaGATCACCCTCTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPLMPLL*ITLLKP
Trigger: GGGCTTCAAGAGGGTGATCCAGAGCAAAGGCATCAA...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCATTGATGCCTTTGCTCTaGATCACCCTCTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPLMPLL*ITLLKP
Trigger: GGGCTTCAAGAGGGTGATCCAGAGCAAAGGCATCAA...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCTGCTTAACAGGTCTTTaGTGCTTGGGTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTCLTGL*CLGSSI
Trigger: GATGCTGCTACCCAAGCACCAAAGACCTGTTAAGCA...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGAAAGACCAGAGTCGTaGTCAGTAGTGCACATGCTT +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSERPES*SVVHML
Trigger: AAGCATGTGCACTACTGACCACGACTCTGGTCTTTC...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAACTAAGGGGAGTAGGTTaGGTTAGGAACCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQLRGVG*VRNPSS
Trigger: ACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAG...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAAGCATTTCTGTGCTGTTaGGTTCTGAGAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEAFLCC*VLRRSS
Trigger: TGAGGATCTTCTCAGAACTCAACAGCACAGAAATGC...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCTCATTCCCCGGACAATaGTCAGATGCATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NPDTTLSRGGSRSPSSSPSFPGQ*SDAFLC
Trigger: GCACAGAAATGCATCTGATCATTGTCCGGGGAATGA...GGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCTCATTCCCCGGACAATaGTCAGATGCATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTSFPGQ*SDAFLC
Trigger: GCACAGAAATGCATCTGATCATTGTCCGGGGAATGA...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGGAAGATCTCAAACTTaGTGCCTTTGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSGRSQT*CLCSGS
Trigger: TGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCC...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGGGAGTCACGGAACCCTaGCACCACCCTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKGVTEP*HHPQQG
Trigger: CCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCC...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGTAGTTCCCGCTCTGTaGCCCACTAAAAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQVVPAL*PTKSSA
Trigger: CGCAGAGCTTTTAGTGGGTCACAGAGCGGGAACTAC...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGTCAGGACGGCTGTCTaGACTGGAGGTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQVRTAV*TGGSVS
Trigger: AGACACTGAACCTCCAGTGCAGACAGCCGTCCTGAC...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTCAGTTTCTCTGCAGCTaGCAATGTCGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPQFLCS*QCRCHC
Trigger: GCAGTGGCAGCGACATTGGCAGCTGCAGAGAAACTG...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCATTAACAGGTCTTTGGTaGTTGGGTAGCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSLTGLW*LGSSIS
Trigger: AGAGATGCTGCTACCCAAGCACCAAAGACCTGTTAA...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTCGCGCTCGCAGCGCCTaGCTTTGGCTGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLRARSA*LWLLRL
Trigger: CAGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCG...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACCAGGTGCCGGGGGCATaGCACTCAGATCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: SFKGTSRSGATGGRGKLYQVPGA*HSDPRA
Trigger: AGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTG...GTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCGGCCACTGGGGTTGCTaGGACGTCAGGGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVGHWGC*DVRGHH
Trigger: GTGATGGCCCCTGACGTCCCAGCAACCCCAGTGGCC...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTGGCCACTGGGGTTGCTaGGACGTCAGGGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: QQQERPESWSVVHMLNRSGHWGC*DVRGHH
Trigger: GTGATGGCCCCTGACGTCCCAGCAACCCCAGTGGCC...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGCTCTGTAGGGGCCACTaGGGTTGCTGGGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVLCRGH*GCWDVR
Trigger: CCTGACGTCCCAGCAACCCCAGTGGCCCCTACAGAG...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTCCACCACTCCGGGCCTaGATGCCCGCCTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGPPLRA*MPASRY
Trigger: GTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGG...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCGGCTCAGGCAGGCGCTaGGATGAAGGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVGSGRR*DEGTVG
Trigger: GCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCC...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCGGTCCTGGCTGCGCTTaGCCTGCAGGGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSGPGCA*PAGLPA
Trigger: AGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACC...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGCTCTTGAAGCCCCGGTaGTTTCGGTTGATGTTTAGT +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQLLKPR*FRLMFS
Trigger: ACTAAACATCAACCGAAACCACCGGGGCTTCAAGAG...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTTTTATCAGCCGGGGCTaGATCCTCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLFISRG*ILCRGQ
Trigger: CTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAA...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAGGCAGGCGCTGGGATaGAGGGACTGTGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSRQALG*RDCGPC
Trigger: GCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCT...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAATGTGCTGTTGAGTTCTaGGAAGATCCTCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQECAVEF*EDPHSL
Trigger: CAGACTGTGAGGATCTTCTCAGAACTCAACAGCACA...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp ACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATTGTGCTGTTGAGTTCTaGGAAGATCCTCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TPPSAGEVPDHPQVLPSHCAVEF*EDPHSL
Trigger: CAGACTGTGAGGATCTTCTCAGAACTCAACAGCACA...ATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCGCATTTCTGTGCTGTTaGGTTCTGAGAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: SCLGQATTGPLESRNPDTAFLCC*VLRRSS
Trigger: TGAGGATCTTCTCAGAACTCAACAGCACAGAAATGC...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCAGGAAGATCTCAAACTTaGTGCCTTTGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPGRSQT*CLCSGS
Trigger: TGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCC...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp AGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCCAGGCAGAGCTGGGGTaGCGGAGTTGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: RPFKNFNLQVWWEALSCLQAELG*RSCLGQ
Trigger: CTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTG...GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCCTCAGATCCACGGGCTaGCCCTTCTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFLRSTG*PFSRAS
Trigger: GGAGGCCCTGGAGAAGGGGCAGCCCGTGGATCTGAG...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGCTTCAGATCCTCAGGTaGCGGGGGCATGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVLQILR*RGHGTQ
Trigger: CTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAG...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACCGTCCTGCTCGGTGTaGTCGAATAGCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSAPSCSV*SNSILI
Trigger: TATCAAGATGCTATTCGAGCACACCGAGCAGGACGG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGCCAGTCACCTTTCTTTaGTCTATAGGTCATCTTATG +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGPVTFL*SIGHLM
Trigger: CATAAGATGACCTATAGAGCAAAGAAAGGTGACTGG...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTGGCTCACCCTGCAGGTaGCCAGGAGGCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGGSPCR*PGGSSS
Trigger: CGAGGACGAGCCTCCTGGGCACCTGCAGGGTGAGCC...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR GCA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCAGAAGGCCCAGAGAGCTaGCCACCTCACAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LWCLGSSISYVQRLLKPAEGPES*PPHKPL
Trigger: CAGGGGCTTGTGAGGTGGGCAGCTCTCTGGGCCTTC...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR CCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACCACCCCTTGGCCTCTaGCCTGAGGGCCCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTPPLGL*PEGPSE
Trigger: CTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGGGTGG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTCTGCCCCTTGGGTGCTaGCTTCTTGCCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLLPLGC*LLACGL
Trigger: CAAACCACAGGCAAGAAGCCAGCACCCAAGGGGCAG...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTCGCAGCGCCTGGCTTTaGCTGCTTCGCCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLRSAWL*LLRLPP
Trigger: AGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGCTGCG...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCCAGGTGCCGGGGGCATaGCACTCAGATCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFQVPGA*HSDPRA
Trigger: AGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTG...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCGTCAGGGGCCATCACTaGCTGCACTCGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFVRGHH*LHSLHG
Trigger: GCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGAC...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACACATCTTGATATTGCTTaGCAATGCGCTCATGCATCC +
Preference number: 4 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTHLDIA*QCAHAS
Trigger: GGATGCATGAGCGCATTGCCAAGCAATATCAAGATG...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGAGCCTCAAGCCATTTaGCTACCCGCAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQEPQAI*LPADRL
Trigger: AAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTC...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TTGGGTTGTAGCTGGCTCCCAACTGCAGGTGAGTCACTAATCTCCAATGTTTGGACTCAAAGTGGTGGGTaGGAGGGTCGAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGCSWLPTAGESLISNVWTQSGG*EGRGPE
Trigger: CTCAGGGCCTCGACCCTCCCACCCACCACTTTGAGT...CCAAACATTGGAGATTAGTGACTCACCTGCAGTTGGGAGCCAGCTACAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTTTCAACTCAAAGTGGTaGGTGGGAGGGTCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLFNSKW*VGGSRP
Trigger: GGGCCTCGACCCTCCCACCCACCACTTTGAGTTGAA...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCATTGATGCCTTTGCTCTaGATCACCCTCTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALMPLL*ITLLKP
Trigger: GGGCTTCAAGAGGGTGATCCAGAGCAAAGGCATCAA...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGAAGAAGGACCCTTTGTaGAAGATCTCAAACTTGATG +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGKKDPL*KISNLM
Trigger: CATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTT...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGGGGACAGGCTACCACTaGCCCACTGGAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVGTGYH*PTGVTE
Trigger: TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCC...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAGTCTTTTCTCTTGGGTaGGTAGACCAAACCCAAGAT +
Preference number: 4 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTVFSLG*VDQTQD
Trigger: ATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGAC...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCCCTTGGCCTCTGGCCTaGGGGCCCTTCCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSPWPLA*GPFRGL
Trigger: AAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGG...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTTCTTCCCAATCCTCATaGGCTCTCGGGCACGGTCTA +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLSSQSS*ALGHGL
Trigger: TAGACCGTGCCCGAGAGCTCATGAGGATTGGGAAGA...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTCCACGGCTGGGGGAATaGCTGAGGGTGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGPRLGE*LRVLWE
Trigger: CTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGG...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GGAAGCATGGTCCAGCCCTGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTTTTATCAGCCGGGGCTaGATCCTCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSMVQPCYPPKGHIQSSVFISRG*ILCRGQ
Trigger: CTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAA...AACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACAGGGCTGGACCATGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSCTVAA*LLSWCW
Trigger: CCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCA...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGACAAAGCTCAGTTCTTaGGCTGTGCTTATGCAATAC +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQTKLSS*AVLMQY
Trigger: GTATTGCATAAGCACAGCTCAAGAACTGAGCTTTGT...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGATATTGCTTGGCAATaGGCTCATGCATCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQDIAWQ*AHASEP
Trigger: AGGCTCGGATGCATGAGCGCATTGCCAAGCAATATC...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTAGAGGCCAGTTTCTCTaGAGCTGCCAATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSRGQFL*SCQCRC
Trigger: GCAGCGACATTGGCAGCTGCAGAGAAACTGGCCTCT...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTCCCTGGTGCATGAACTaGTTGGAGAACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSPWCMN*LENSRH
Trigger: GTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGG...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTGAATGGAAGTGTCCTTaGCCTCTTCCAGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLEWKCP*PLPDSG
Trigger: CCCCGAGTCTGGAAGAGGGCAAGGACACTTCCATTC...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTTGGGAGGCTTTGTCTTaGCTCGTCAGCCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSWEALS*LVSLEV
Trigger: AACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCA...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGGCCCTTCCGAGGTCTTaGCCCTGGCATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGALPRS*PWHHGS
Trigger: GCTGCCATGATGCCAGGGCCAAGACCTCGGAAGGGC...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAACATCTTGATATTGCTTaGCAATGCGCTCATGCATCC +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQEHLDIA*QCAHAS
Trigger: GGATGCATGAGCGCATTGCCAAGCAATATCAAGATG...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTGCCGTGCAGGTTTCTTaGCCACTGGGGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLAVQVS*PLGPVL
Trigger: CAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGC...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTAGGGCGAAGGCACCTTaGACAGATCAACAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLRAKAP*TDQQVC
Trigger: GCAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCT...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTTCAGCCACGTTGCCCTaGTGCATGAACTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLSATLP*CMNCLE
Trigger: CTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGA...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCATCGGGAGTCACCCCTaGAGGGGCTGGGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVIGSHP*RGWEVH
Trigger: ATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGAT...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTGCCCTCTTGAAGCCCCGGTaGTTTCGGTTGATGTTTAGT +
Preference number: 4 (lower is better)
Translates to: GVKGLQDSMVQRNGSVLALLKPR*FRLMFS
Trigger: ACTAAACATCAACCGAAACCACCGGGGCTTCAAGAG...GGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGAAGAAGGACCCTTTGTaGAAGATCTCAAACTTGATG +
Preference number: 4 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRKKDPL*KISNLM
Trigger: CATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTT...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTTGCTTAACAGGTCTTTaGTGCTTGGGTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVCLTGL*CLGSSI
Trigger: GATGCTGCTACCCAAGCACCAAAGACCTGTTAAGCA...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAGTCTTTTCTCTTGGGTaGGTAGACCAAACCCAAGAT +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQEVFSLG*VDQTQD
Trigger: ATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGAC...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACTTGCCTCGTCAGCCTaGAGGTTCTGTTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALASSA*RFCFER
Trigger: TCTTTCAAAACAGAACCTCCAGGCTGACGAGGCAAG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTAATCTCCAAGTCTGGTaGGAGGCTTTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPNLQVW*EALSCL
Trigger: GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATT...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTTTCAATCTCCAAGTCTaGTGGGAGGCTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVFNLQV*WEALSC
Trigger: GCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAA...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTCCTGTTTCCTGTATGTaGATAAATCTCAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTPVSCM*INLRTR
Trigger: TCTTGTCCTGAGATTTATCCACATACAGGAAACAGG...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGCTAGATACCTCGCGGTaGATCCGAGCCAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGLDTSR*IRAKPR
Trigger: CCGGGGTTTGGCTCGGATTCACCGCGAGGTATCTAG...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACTGAGCTGCTGGGGCTaGAGCTGTCAGGACGGCTGT +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTLSCWG*SCQDGC
Trigger: ACAGCCGTCCTGACAGCTTCAGCCCCAGCAGCTCAG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCATTTATCAGCCGGGGCTaGATCCTCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWCLGSSISYVQRLLKPAFISRG*ILCRGQ
Trigger: CTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAA...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGTCATTCCCCGGACAATaGTCAGATGCATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQSFPGQ*SDAFLC
Trigger: GCACAGAAATGCATCTGATCATTGTCCGGGGAATGA...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCCAGGCAGAGCTGGGGTaGCGGAGTTGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSQAELG*RSCLGQ
Trigger: CTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTG...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTGGGGTTGCAGCGAGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLGVAAS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCGCTGCAACCCC...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTGTTGACTTTCCGTCCTaGTCGGTGTGCTCGAATAGC +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLVDFPS*SVCSNS
Trigger: GCTATTCGAGCACACCGAGCAGGACGGAAAGTCAAC...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCAAGCTGCCAATGTCGCTaGCACTGCGTCCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: LWCLGSSISYVQRLLKPASCQCR*HCVLLN
Trigger: GTTGAGGAGGACGCAGTGGCAGCGACATTGGCAGCT...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTAGGGACTGTGGGCCGTaGAGGTTTCTTGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLRDCGP*RFLGHW
Trigger: CCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCT...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTCTTGGCCTGCAGGGCTaGCCGCTGATACTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QQQERPESWSVVHMLNRSLGLQG*PLILQF
Trigger: AAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAG...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTGCTCCAGGTCCTGGCTaGGCTTGGCCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTAPGPG*AWPAGL
Trigger: CAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGC...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCATTAACAGGTCTTTGGTaGTTGGGTAGCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALTGLW*LGSSIS
Trigger: AGAGATGCTGCTACCCAAGCACCAAAGACCTGTTAA...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAACCAGTCACCTTTCTTTaGTCTATAGGTCATCTTATG +
Preference number: 4 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQPVTFL*SIGHLM
Trigger: CATAAGATGACCTATAGAGCAAAGAAAGGTGACTGG...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCATTGGCCCTGGCATCATaGCAGCCTAGATACCTCGCG +
Preference number: 4 (lower is better)
Translates to: LWCLGSSISYVQRLLKPALALAS*QPRYLA
Trigger: CGCGAGGTATCTAGGCTGCCATGATGCCAGGGCCAA...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCAAATGCCAGGGAGGCTaGTCTCAGGTTGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RPFKNFNLQVWWEALSCLKCQGG*SQVGRG
Trigger: ACCCCTCCCAACCTGAGACCAGCCTCCCTGGCATTT...GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TTGGGTTGTAGCTGGCTCCCAACTGCAGGTGAGTCACTAATCTCCAATGTTTGGGTCTTCAACTCAAAGTaGTGGGTGGGAGGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: LGCSWLPTAGESLISNVWVFNSK*WVGGSR
Trigger: CCTCGACCCTCCCACCCACCACTTTGAGTTGAAGAC...CCAAACATTGGAGATTAGTGACTCACCTGCAGTTGGGAGCCAGCTACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGAAGATCCTCACAGTCTaGAATGTCTTCAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: WAPGTQPVSVEPQRGQQQKILTV*NVFNSK
Trigger: CTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTT...CTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTACCATCTGCACATCCTaGCCACTCAGAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLTICTS*PLRGSR
Trigger: GCGGGAGCCTCTGAGTGGCCAGGATGTGCAGATGGT...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTGGTGACGGAGTTGTCTaGGACAGGCTACCACTGGCC +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLGDGVV*DRLPLA
Trigger: GGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCACAGGCAGAGCTaGGGTGACGGAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGRHRQS*GDGVVW
Trigger: CCAGACAACTCCGTCACCCCAGCTCTGCCTGTGCCT...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTACGCATGCATGCCTTTaGCTACAACAAAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVTHACL*LQQRPF
Trigger: AAAAGGCCTTTGTTGTAGCCAAAGGCATGCATGCGT...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTGATTTGGGTTGTAGCTaGCTCCCAACTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSDLGCS*LPTAGE
Trigger: CTCACCTGCAGTTGGGAGCCAGCTACAACCCAAATC...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGAATTTTAAAATGATTTaGGTTGTAGCTGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGNFKMI*VVAGSQ
Trigger: TTGGGAGCCAGCTACAACCCAAATCATTTTAAAATT...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACAGCCCGCTTGGCACTaGGGGCAGCCACTTTGTACT +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTQPAWH*GQPLCT
Trigger: AGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTGGAAGATCTCAAACTTaGTGCCTTTGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPGRSQT*CLCSGS
Trigger: TGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCC...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTCCAGCCAGTTCTCAGTaGCCATCTGCACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLPASSQ*PSAHPG
Trigger: GCCAGGATGTGCAGATGGTCACTGAGAACTGGCTGG...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGCCAGCCAGTTCTCAGTaGCCATCTGCACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGPASSQ*PSAHPG
Trigger: GCCAGGATGTGCAGATGGTCACTGAGAACTGGCTGG...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCAACAAAGCTCAGTTCTTaGGCTGTGCTTATGCAATAC +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSATKLSS*AVLMQY
Trigger: GTATTGCATAAGCACAGCTCAAGAACTGAGCTTTGT...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTCTTGAGCTGTGCTTATGCGGGGTTGCAGCGAGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: CYPPKGHIQSSVLELCLCGVAAS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCGCTGCAACCCC...GCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCTTGTTCAGCCTCTGCTaGAGGGCATCCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: RPFKNFNLQVWWEALSCLLFSLC*RASSTV
Trigger: GACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAA...GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGTTGTTCAGCCTCTGCTaGAGGGCATCCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKLFSLC*RASSTV
Trigger: GACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAA...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGTTCAGCCTCTGCTaGAGGGCATCCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: QQQERPESWSVVHMLNRSLFSLC*RASSTV
Trigger: GACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAA...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTCAGGGGTTAAGGGGCTaGAGGACTCCATGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QQQERPESWSVVHMLNRSQGLRG*RTPWYR
Trigger: TCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTG...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCAGGCTGGTCTCAGGTTaGGAGGGGTTGTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFRLVSG*EGLSDS
Trigger: GGAGTCAGACAACCCCTCCCAACCTGAGACCAGCCT...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGAAGATCCTCACAGTCTaGAATGTCTTCAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGKILTV*NVFNSK
Trigger: CTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTT...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCATCTGCACATCCTaGCCACTCAGAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPTICTS*PLRGSR
Trigger: GCGGGAGCCTCTGAGTGGCCAGGATGTGCAGATGGT...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCGGGACAGGCTACCACTaGCCCACTGGAGTCACGGAA +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSGTGYH*PTGVTE
Trigger: TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCC...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTCACTGCACTCCAGCCTaGCTGGCAGAGAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLHCTPA*LAESYS
Trigger: AGAGTAGCTCTCTGCCAGCCAGGCTGGAGTGCAGTG...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCACTTGAACCTGGGAGGTaGGGGTTGCAGCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPLEPGR*GLQRAE
Trigger: CTCAGCTCGCTGCAACCCCCACCTCCCAGGTTCAAG...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCATCCAGCACTGTCTGTaGCTCTGTAGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSIQHCL*LCRGHW
Trigger: CCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGAT...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GGAAGCATGGTCCAGCCCTGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTGCAATTCAGCAAAGTTaGCTTTCCGTCCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: GSMVQPCYPPKGHIQSSVAIQQS*LSVLLG
Trigger: ACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGC...AACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACAGGGCTGGACCATGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTTGCAGGGCTGCCCGCTaGTACTGCAGTTTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTCRAAR*YCSFRA
Trigger: GGCACGGAAACTGCAGTATCAGCGGGCAGCCCTGCA...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCACGGGCCTGGATGATCTaGGCCTCAAGCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPRAWMI*ASSHLA
Trigger: AGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCG...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGACACCTAAGACCTCCTaGAGCTCCGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGTPKTS*SSVSSS
Trigger: AGAGCTGCTGACGGAGCTGCAGGAGGTCTTAGGTGT...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACATTGGCAATGCGCTCATaGATCCGAGCCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTLAMRS*IRALRS
Trigger: CGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAA...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTTGACTTTCCGTCCTaGTCGGTGTGCTCGAATAGC +
Preference number: 4 (lower is better)
Translates to: RPFKNFNLQVWWEALSCLVDFPS*SVCSNS
Trigger: GCTATTCGAGCACACCGAGCAGGACGGAAAGTCAAC...GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCCCCTGGTGCATGAACTaGTTGGAGAACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFPWCMN*LENSRH
Trigger: GTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGG...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAACTTGAGCTGTGCTTATaGAATACTATAGTGATCAGT +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQELELCL*NTIVIS
Trigger: ACTGATCACTATAGTATTGCATAAGCACAGCTCAAG...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGTCAGTTCTTGAGCTGTaGTTATGCAATACTATAGTG +
Preference number: 4 (lower is better)
Translates to: RSGATGGRGKLYTVATQGSVLEL*LCNTIV
Trigger: CACTATAGTATTGCATAAGCACAGCTCAAGAACTGA...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAGGGATGAAGGGACTGTaGGCCGTGCAGGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPGMKGL*AVQVSW
Trigger: CCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCC...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTCAGCCACGTTGCCCTaGTGCATGAACTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLSATLP*CMNCLE
Trigger: CTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGA...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGGCTTCTCAAATCGGGTaGTCTCAGCCACGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGASQIG*SQPRCP
Trigger: AGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGC...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCAAAGATCCTCACAGTCTaGAATGTCTTCAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSAKILTV*NVFNSK
Trigger: CTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTT...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTGAAAGACCAGAGTCGTaGTCAGTAGTGCACATGCTT +
Preference number: 4 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLERPES*SVVHML
Trigger: AAGCATGTGCACTACTGACCACGACTCTGGTCTTTC...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACTACCACTGGCCCACTaGAGTCACGGAACCCTGACA +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTLPLAH*SHGTLT
Trigger: TGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAAGATTAGGACTTTGGTaGATACTCTGTATAGTTGAG +
Preference number: 4 (lower is better)
Translates to: APGTQPVSVEPQRGQQQERLGLW*ILCIVE
Trigger: CTCAACTATACAGAGTATCCACCAAAGTCCTAATCT...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTCTTGAGCTGTGCTTATGCAAGGGCAGGGAAGCATaGTCCAGCCCTGTTATCCCC +
Preference number: 4 (lower is better)
Translates to: CYPPKGHIQSSVLELCLCKGREA*SSPVIP
Trigger: GGGGATAACAGGGCTGGACCATGCTTCCCTGCCCTT...GCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATCAGACTGAAATTGAATaGGTTGCAAAGGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNQTEIE*VAKEKP
Trigger: AGGTTTCTCCTTTGCAACCCATTCAATTTCAGTCTG...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CAA 72 bp GAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTaGCCTCGTCAGCCTGGAGGTTCTGTTTTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: ELQSPSLVGGFV*PRQPGGSVLKE
Trigger: CTCTTTCAAAACAGAACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GGAAGCATGGTCCAGCCCTGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTGCTCGAATAGCATCTTaGTATTGCTTGGCAATGCGC +
Preference number: 4 (lower is better)
Translates to: GSMVQPCYPPKGHIQSSVARIAS*YCLAMR
Trigger: GCGCATTGCCAAGCAATATCAAGATGCTATTCGAGC...AACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACAGGGCTGGACCATGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTRCPGA*TAWRTA
Trigger: TGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPRCPGA*TAWRTA
Trigger: TGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACG...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGTGTTTCTTGCGGTCCTaGGCAAGCTTCTCAAATCGG +
Preference number: 4 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKCFLRS*ASFSNR
Trigger: CCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACA...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGTGTGCTGTTGAGTTCTaGGAAGATCCTCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVCAVEF*EDPHSL
Trigger: CAGACTGTGAGGATCTTCTCAGAACTCAACAGCACA...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCGCTCCCAACTGCAGGTaGGTCACTAATCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVAPNCR*VTNLQC
Trigger: ACATTGGAGATTAGTGACTCACCTGCAGTTGGGAGC...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCCTCACAGAGGCTAGCTaGGACTCCAAGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSLTEAS*DSKVFR
Trigger: CCTGAAGACCTTGGAGTCGCAGCTAGCCTCTGTGAG...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp AAATCTCTTACAACTACAAACCCCTTCATAGTCTCCATCCATTCAGAAAAACAAGGGGCCATCACTGGCTaGACTCGCTCCACGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KSLTTTNPFIVSIHSEKQGAITG*TRSTAG
Trigger: CCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCC...TTGTTTTTCTGAATGGATGGAGACTATGAAGGGGTTTGTAGTTGTAAGAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCAGATATTGCTTGGCAATaGGCTCATGCATCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: LWCLGSSISYVQRLLKPADIAWQ*AHASEP
Trigger: AGGCTCGGATGCATGAGCGCATTGCCAAGCAATATC...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAGAGGCCAGTTTCTCTaGAGCTGCCAATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSRGQFL*SCQCRC
Trigger: GCAGCGACATTGGCAGCTGCAGAGAAACTGGCCTCT...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTGAATGGAAGTGTCCTTaGCCTCTTCCAGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGEWKCP*PLPDSG
Trigger: CCCCGAGTCTGGAAGAGGGCAAGGACACTTCCATTC...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACAGGGGTTAAGGGGCTaGAGGACTCCATGGTACAGA +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTQGLRG*RTPWYR
Trigger: TCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCATCAGTTCTTGAGCTGTaGTTATGCAATACTATAGTG +
Preference number: 4 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSASVLEL*LCNTIV
Trigger: CACTATAGTATTGCATAAGCACAGCTCAAGAACTGA...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTCCAGTGACGCATGCATaGCTTTGGCTACAACAAAGG +
Preference number: 4 (lower is better)
Translates to: QQQERPESWSVVHMLNRSPVTHA*LWLQQR
Trigger: CCTTTGTTGTAGCCAAAGGCATGCATGCGTCACTGG...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCTCGGCTACACAGGGGTaGAAAGCACAAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVSATQG*KAQEVS
Trigger: ACTGACTTCTTGTGCTTTGCACCCCTGTGTAGCCGA...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR CCA 90 bp AAATCTCTTACAACTACAAACCCCTTCATAGTCTCCATCCATTCAGAAAAACAACCACCCCTTGGCCTCTaGCCTGAGGGCCCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: KSLTTTNPFIVSIHSEKQPPLGL*PEGPSE
Trigger: CTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGGGTGG...TTGTTTTTCTGAATGGATGGAGACTATGAAGGGGTTTGTAGTTGTAAGAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCGAGCCTCAAGCCATTTaGCTACCCGCAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFEPQAI*LPADRL
Trigger: AAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTC...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAAGGGCGAAGGCACCTTaGACAGATCAACAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPRAKAP*TDQQVC
Trigger: GCAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCT...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTTCAGCCACGTTGCCCTaGTGCATGAACTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGSATLP*CMNCLE
Trigger: CTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGA...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGCAGACTGAAATTGAATaGGTTGCAAAGGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQQTEIE*VAKEKP
Trigger: AGGTTTCTCCTTTGCAACCCATTCAATTTCAGTCTG...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGAATCTCCAAGTCTGGTaGGAGGCTTTGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKNLQVW*EALSCL
Trigger: GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATT...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTACGCATGCATGCCTTTaGCTACAACAAAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSTHACL*LQQRPF
Trigger: AAAAGGCCTTTGTTGTAGCCAAAGGCATGCATGCGT...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCAGCTCGAATAGCATCTTaGTATTGCTTGGCAATGCGC +
Preference number: 4 (lower is better)
Translates to: LWCLGSSISYVQRLLKPAARIAS*YCLAMR
Trigger: GCGCATTGCCAAGCAATATCAAGATGCTATTCGAGC...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR TCA 90 bp GACAAGATGAAGCTGGGACAGGCTCCTCCTACTACCAGTGACGCATGCATGCCTTGTGTTGCATACACGTaGCTGCAATTAAGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: DKMKLGQAPPTTSDACMPCVAYT*LQLSVK
Trigger: TTTAACACTTAATTGCAGTCACGTGTATGCAACACA...AGGCATGCATGCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTGCGCCTGGCTTTGGCTaGTTCGCCTGCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VLELCLCNTIVISKLNVFAPGFG*FACLLG
Trigger: GCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGC...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTTACTTGTTCAGCCTCTaGTGCAGGGCATCCAGCACT +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGYLFSL*CRASST
Trigger: AGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTA...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTGTTGACTTTCCGTCCTaGTCGGTGTGCTCGAATAGC +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGVDFPS*SVCSNS
Trigger: GCTATTCGAGCACACCGAGCAGGACGGAAAGTCAAC...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACAGTTTCAGGTGTGCTGTaGCAACCAGCTTGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTVSGVL*QPACRF
Trigger: GAAGCGACAAGCTGGTTGGCACAGCACACCTGAAAC...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR GCA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGCCAGTGACGCATGCATaGCTTTGGCTACAACAAAGG +
Preference number: 4 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGPVTHA*LWLQQR
Trigger: CCTTTGTTGTAGCCAAAGGCATGCATGCGTCACTGG...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTCCGAGGTCTTGGCCCTaGCATCATGGCAGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTPRSWP*HHGSLD
Trigger: ATCTAGGCTGCCATGATGCCAGGGCCAAGACCTCGG...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTAGAGCCCCATCTGCTTaGCAGCGGCCACCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VLELCLCNTIVISKLNVFRAPSA*QRPPLG
Trigger: GCCAAGGGGTGGCCGCTGCCAAGCAGATGGGGCTCT...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AAATCTCTTACAACTACAAACCCCTTCATAGTCTCCATCCATTCAGAAAAACAACTGTTGGCTGGTTCCTaGGGGGCCAGGGGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: KSLTTTNPFIVSIHSEKQLLAGS*GARGRF
Trigger: AAAGCGGCCCCTGGCCCCCCAGGAACCAGCCAACAG...TTGTTTTTCTGAATGGATGGAGACTATGAAGGGGTTTGTAGTTGTAAGAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGCTCTTGAAGCCCCGGTaGTTTCGGTTGATGTTTAGT +
Preference number: 4 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKLLKPR*FRLMFS
Trigger: ACTAAACATCAACCGAAACCACCGGGGCTTCAAGAG...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTGCTTAACAGGTCTTTaGTGCTTGGGTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: QQQERPESWSVVHMLNRSCLTGL*CLGSSI
Trigger: GATGCTGCTACCCAAGCACCAAAGACCTGTTAAGCA...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGGTCTTTTCTCTTGGGTaGGTAGACCAAACCCAAGAT +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVVFSLG*VDQTQD
Trigger: ATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGAC...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGAGATTAGGACTTTGGTaGATACTCTGTATAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SRSGATGGRGKLYTVATQRLGLW*ILCIVE
Trigger: CTCAACTATACAGAGTATCCACCAAAGTCCTAATCT...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp AGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCCTTGCCTCGTCAGCCTaGAGGTTCTGTTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: RPFKNFNLQVWWEALSCLLASSA*RFCFER
Trigger: TCTTTCAAAACAGAACCTCCAGGCTGACGAGGCAAG...GAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACTTCAATCTCCAAGTCTaGTGGGAGGCTTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SFKGTSRSGATGGRGKLYFNLQV*WEALSC
Trigger: GCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAA...GTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp TGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTCTTGAGCTGTGCTTATGCGCTCCCAACTGCAGGTaGGTCACTAATCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: CYPPKGHIQSSVLELCLCAPNCR*VTNLQC
Trigger: ACATTGGAGATTAGTGACTCACCTGCAGTTGGGAGC...GCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACATCTCCAGCTGTTTCTTaGGGTCCTGAGCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTSPAVS*GPEQAS
Trigger: AGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGA...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCCTAAGGGGAGTAGGTTaGGTTAGGAACCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSLRGVG*VRNPSS
Trigger: ACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAG...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTCAGGCTGGAGTGCAGTaGTACAATCGAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTQAGVQ*YNRGSL
Trigger: CAGTGAGCCTCGATTGTACCACTGCACTCCAGCCTG...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTGCATTTCTGTGCTGTTaGGTTCTGAGAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLAFLCC*VLRRSS
Trigger: TGAGGATCTTCTCAGAACTCAACAGCACAGAAATGC...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGAAGAAGGACCCTTTGTaGAAGATCTCAAACTTGATG +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVKKDPL*KISNLM
Trigger: CATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTT...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCGAAAGACCAGAGTCGTaGTCAGTAGTGCACATGCTT +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSERPES*SVVHML
Trigger: AAGCATGTGCACTACTGACCACGACTCTGGTCTTTC...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GGAAGCATGGTCCAGCCCTGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTCCTGTTTCCTGTATGTaGATAAATCTCAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: GSMVQPCYPPKGHIQSSVPVSCM*INLRTR
Trigger: TCTTGTCCTGAGATTTATCCACATACAGGAAACAGG...AACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACAGGGCTGGACCATGCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGTGTGTTGCATACACGTaGCTGCAATTAAGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: QERPESWSVVHMLNRSLVCVAYT*LQLSVK
Trigger: TTTAACACTTAATTGCAGTCACGTGTATGCAACACA...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTTTGGCAATGCGCTCATaGATCCGAGCCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VLELCLCNTIVISKLNVFLAMRS*IRALRS
Trigger: CGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAA...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCATTAACAGGTCTTTGGTaGTTGGGTAGCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPLTGLW*LGSSIS
Trigger: AGAGATGCTGCTACCCAAGCACCAAAGACCTGTTAA...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTCATCTTGATATTGCTTaGCAATGCGCTCATGCATCC +
Preference number: 4 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGHLDIA*QCAHAS
Trigger: GGATGCATGAGCGCATTGCCAAGCAATATCAAGATG...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTAGTCGCAGGTCCTCATaGTGGATGAGGATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTSRRSS*WMRMKS
Trigger: TGACTTCATCCTCATCCACCATGAGGACCTGCGACT...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACAGTCTTTTCTCTTaGGTGGGTAGACCAAACCCA +
Preference number: 4 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSNSLFS*VGRPNP
Trigger: TGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTT...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CCA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTGCACTCCAGCCTGGCTaGCAGAGAGCTACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VLELCLCNTIVISKLNVFALQPG*QRATLS
Trigger: AGACAGAGTAGCTCTCTGCCAGCCAGGCTGGAGTGC...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GGAAGCATGGTCCAGCCCTGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTAATTTTAAAATGATTTaGGTTGTAGCTGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GSMVQPCYPPKGHIQSSVNFKMI*VVAGSQ
Trigger: TTGGGAGCCAGCTACAACCCAAATCATTTTAAAATT...AACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACAGGGCTGGACCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR TCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTTCTTCCCAGTTCTACTaGGGAACATCAGAAACTCAG +
Preference number: 4 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTSSQFY*GTSETQ
Trigger: CTGAGTTTCTGATGTTCCTCAGTAGAACTGGGAAGA...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR GCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTCTTGAGCTGTGCTTATaGAATACTATAGTGATCAGT +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLLELCL*NTIVIS
Trigger: ACTGATCACTATAGTATTGCATAAGCACAGCTCAAG...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTAGATTATTGCTGTGTTaGATACACGTGACTGCAATT +
Preference number: 4 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLRLLLC*IHVTAI
Trigger: AATTGCAGTCACGTGTATGCAACACAGCAATAATCT...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CCA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTAACAGTCTTTTCTCTTaGGTGGGTAGACCAAACCCA +
Preference number: 4 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTNSLFS*VGRPNP
Trigger: TGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTT...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR GCA 90 bp TGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTCTTGAGCTGTGCTTATGCAGATTATTGCTGTGTTaGATACACGTGACTGCAATT +
Preference number: 4 (lower is better)
Translates to: CYPPKGHIQSSVLELCLCRLLLC*IHVTAI
Trigger: AATTGCAGTCACGTGTATGCAACACAGCAATAATCT...GCATAAGCACAGCTCAAGAACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
3UTR CAA 72 bp ATGAAGGCTAATCACCCTCCTTTTCATTCTAGATTATaGCTGTGTTGCATACACGTGACTGCAATTAAGTGT +
Preference number: 4 (lower is better)
Translates to: MKANHPPFHSRL*LCCIHVTAIKC
Trigger: ACACTTAATTGCAGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGCCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS CCA 90 bp GCTGCGACTCCAAGGTCTTCAGGCCGCGCTCGCAGCGCCTGGCTTTaGCTGCTTCGCCTGCCTCCTTGGCACTGGCCGCAGCCTCTCGGT +
Preference number: 5 (lower is better)
Translates to: AATPRSSGRARSAWL*LLRLPPWHWPQPLG
Trigger: ACCGAGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCGGCCTGAAGACCTTGGAGTCGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 90 bp AGGCTAGCTGCGACTCCAAGGTCTTCAGGCCGCGCTCGCAGCGCCTaGCTTTGGCTGCTTCGCCTGCCTCCTTGGCACTGGCCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: RLAATPRSSGRARSA*LWLLRLPPWHWPQP
Trigger: AGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCGGCCTGAAGACCTTGGAGTCGCAGCTAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 90 bp CGCTCATGCATCCGAGCCTTGCGCTCGTCCCCACCACTCCGGGCCTaGATGCCCGCCTCGCGGTACTTGTTCAGCCTCTGCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RSCIRALRSSPPLRA*MPASRYLFSLCCRA
Trigger: TGCCCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS-3UTR CAA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAAGGTCCTGGCTGCGCTaGGCCTGCAGGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSRSWLR*ACRAAR
Trigger: GCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCT...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS GCA 90 bp CGACTCCAAGGTCTTCAGGCCGCGCTCGCAGCGCCTGGCTTTGGCTaGTTCGCCTGCCTCCTTGGCACTGGCCGCAGCCTCTCGGTAGTT +
Preference number: 5 (lower is better)
Translates to: RLQGLQAALAAPGFG*FACLLGTGRSLSVV
Trigger: AACTACCGAGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCGGCCTGAAGACCTTGGAGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 90 bp CATGCATCCGAGCCTTGCGCTCGTCCCCACCACTCCGGGCCTGGATaGCCGCCTCGCGGTACTTGTTCAGCCTCTGCTGCAGGGCATCCA +
Preference number: 5 (lower is better)
Translates to: HASEPCARPHHSGPG*PPRGTCSASAAGHP
Trigger: TGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 90 bp CAGGCAGGCGCTGGGATGAAGGGACTGTGGGCCGTGCAGGTTTCTTaGCCACTGGGGCCTGTGCTGGGGGCTCACCCTCGTCCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: QAGAGMKGLWAVQVS*PLGPVLGAHPRPRL
Trigger: AAGACGAGGACGAGGGTGAGCCCCCAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284376.8
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
CDS CCA 90 bp AGGGACTGTGGGCCGTGCAGGTTTCTTGGCCACTGGGGCCTGTGCTaGGGGCTCACCCTGCAGGTGCCCAGGAGGCTCGTCCTCGTCTTT +
Preference number: 5 (lower is better)
Translates to: RDCGPCRFLGHWGLC*GLTLQVPRRLVLVF
Trigger: AAAGACGAGGACGAGCCTCCTGGGCACCTGCAGGGTGAGCCCCCAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371586.6
CDS-3UTR CAA 90 bp GGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCAGCCAAACCCCGGCCTaGTCTCACCCGGCACCGCCC +
Preference number: 5 (lower is better)
Translates to: GDGVVWDRLPLAHWSHGTSQTPA*SHPAPP
Trigger: GGGCGGTGCCGGGTGAGACAAGGCCGGGGTTTGGCT...GGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCAGCCAAACCCCGGCCTaGTCTCACCCGGCACCGCCC +
Preference number: 5 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLSQTPA*SHPAPP
Trigger: GGGCGGTGCCGGGTGAGACAAGGCCGGGGTTTGGCT...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS GCA 90 bp CCACTCCGGGCCTGGATGCCCGCCTCGCGGTACTTGTTCAGCCTCTaGTGCAGGGCATCCAGCACTGTCTGTGACTCTGTAGGGGCCACT +
Preference number: 5 (lower is better)
Translates to: PLRAWMPASRYLFSL*CRASSTVCDSVGAT
Trigger: AGTGGCCCCTACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 90 bp TTCTGCTTGGGGCGGCTGCTGGGGGAGGGTCCTGGAAAGGGTGACTaGAGCCTTGCTGTGCAGGCCAGGCCACACACGTGTTACGTCTGG +
Preference number: 5 (lower is better)
Translates to: FCLGRLLGEGPGKGD*SLAVQARPHTCYVW
Trigger: CCAGACGTAACACGTGTGTGGCCTGGCCTGCACAGCAAGGCTGCAGTCACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCCCAAGCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 90 bp GACTGCAGCCTTGCTGTGCAGGCCAGGCCACACACGTGTTACGTCTaGGCGCACAGGAGCATCAGAGGCACAGGGGCCCTCCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: DCSLAVQARPHTCYV*AHRSIRGTGALLQN
Trigger: GTTCTGGAGGAGGGCCCCTGTGCCTCTGATGCTCCTGTGCGCCCAGACGTAACACGTGTGTGGCCTGGCCTGCACAGCAAGGCTGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS TCA 90 bp GAAGCCAGCAAAGCTGGGAAAGTCATCTCCTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGGCCATCGGCTCACAAGCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: EASKAGKVISCTVAA*LLSWCWPSAHKPLG
Trigger: GCCCAGGGGCTTGTGAGCCGATGGCCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCAGGAGATGACTTTCCCAGCTTTGCTGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000491136.6
CDS TCA 90 bp GAGGCACAGGGGCCCTCCTCCAGAACCCACCTGAGCTGCTGGGGCTaGAGCTGTCAGGACGGCTGTCTGCACTGGAGGTTCAGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: EAQGPSSRTHLSCWG*SCQDGCLHWRFSVF
Trigger: GAAGACACTGAACCTCCAGTGCAGACAGCCGTCCTGACAGCTTCAGCCCCAGCAGCTCAGGTGGGTTCTGGAGGAGGGCCCCTGTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 90 bp CTCGGTGACTCCTTAGAACTTGAGGCCCTGGGCTCAGGCAGGCGCTaGGATGAAGGGACTGTGGGCCGTGCAGGTTTCTTGGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: LGDSLELEALGSGRR*DEGTVGRAGFLATG
Trigger: CCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCCCAGGGCCTCAAGTTCTAAGGAGTCACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS-3UTR CAA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAATCATGCATCCGAGCCTaGCGCTCGTCCCCACCACTC +
Preference number: 5 (lower is better)
Translates to: GVTELSGTGYHWPTGVTESCIRA*RSSPPL
Trigger: GAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGA...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCGGCCGTGCAGGTTTCTaGGCCACTGGGGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: SCLGQATTGPLESRNPDTGRAGF*ATGACA
Trigger: AGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCC...GGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS GCA 90 bp ATTTGGCTACCCGCAGATAGGCTTTGGCCTGCTCCAGGTCCTGGCTaGGCTTGGCCTGCAGGGCTGCCCGCTGATACTGCAGTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: IWLPADRLWPAPGPG*AWPAGLPADTAVSV
Trigger: CACGGAAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGGTAGCCAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 90 bp CCTTTGAGGCTGGCTGCCACGGAGGAGTTTCTTGTGCTCAGTTTCTaGTTGGGGCGGCTGCTGGGGGAGGGTCCTGGAAAGGGTGACTGC +
Preference number: 5 (lower is better)
Translates to: PLRLAATEEFLVLSF*LGRLLGEGPGKGDC
Trigger: GCAGTCACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCCCAAGCAGAAACTGAGCACAAGAAACTCCTCCGTGGCAGCCAGCCTCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS GCA 90 bp AGGGCCTGGCCACTCCAGGGCCTGCTAGGCCTACCATTCTCCCTCTaGGGAAGCTGCCCTAGAAGATGGAGCTCTGGGACTCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: RAWPLQGLLGLPFSL*GSCPRRWSSGTPGE
Trigger: TTCTCCTGGAGTCCCAGAGCTCCATCTTCTAGGGCAGCTTCCGCAGAGGGAGAATGGTAGGCCTAGCAGGCCCTGGAGTGGCCAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 90 bp CCACGGAGGAGTTTCTTGTGCTCAGTTTCTGCTTGGGGCGGCTGCTaGGGGAGGGTCCTGGAAAGGGTGACTGCAGCCTTGCTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PRRSFLCSVSAWGGC*GRVLERVTAALLCR
Trigger: CCTGCACAGCAAGGCTGCAGTCACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCCCAAGCAGAAACTGAGCACAAGAAACTCCTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS-3UTR CAA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGCTTCGCCTGCCTCCTaGGCACTGGCCGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNASPAS*ALAAAS
Trigger: AGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAGC...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAGGCCGTGCAGGTTTCTaGGCCACTGGGGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: APGTQPVSVEPQRGQQQEGRAGF*ATGACA
Trigger: AGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCC...TTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAAGTCTGGTGGGAGGCTTaGTCTTGCCTCGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEVWWEA*SCLVSL
Trigger: CAGGCTGACGAGGCAAGACAAAGCCTCCCACCAGAC...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS TCA 90 bp GAAGCCAGCAAAGCTGGGAAAGTCATCTCCTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGGCCATCGGCTTCACCTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: EASKAGKVISCTVAA*LLSWCWPSASPPAS
Trigger: GGAAGCTGGAGGTGAAGCCGATGGCCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCAGGAGATGACTTTCCCAGCTTTGCTGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438021.5
CDS GCA 90 bp TCACCATCCAGGGGCTCAGTCTCCTCGTCCACACCTAAGACCTCCTaGAGCTCCGTCAGCAGCTCTGCATCTTCCTCCAGCCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPSRGSVSSSTPKTS*SSVSSSASSSSPSS
Trigger: GGAGGAAGGGCTGGAGGAAGATGCAGAGCTGCTGACGGAGCTGCAGGAGGTCTTAGGTGTGGACGAGGAGACTGAGCCCCTGGATGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS GCA 90 bp CGAGGCCCTGAGCCTGGGCCAGCTGCAGGATCTCCAGCTGTTTCTTaGGGTCCTGAGCAAGCTTCTCAAATCGGGTGGTCTCAGCCACGT +
Preference number: 5 (lower is better)
Translates to: RGPEPGPAAGSPAVS*GPEQASQIGWSQPR
Trigger: ACGTGGCTGAGACCACCCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGGCTCAGGGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000485966.1
ENST00000491136.6
CDS CCA 90 bp CTGGGTCTAAGTCTGAAACGGGCTGGGCAGAAATGCCAGGGAGGCTaGTCTCAGGTTGGGAGGGGTTGTCTGACTCCAAGGCAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LGLSLKRAGQKCQGG*SQVGRGCLTPRQGE
Trigger: CTCCCCCTGCCTTGGAGTCAGACAACCCCTCCCAACCTGAGACCAGCCTCCCTGGCATTTCTGCCCAGCCCGTTTCAGACTTAGACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000491136.6
CDS CCA 90 bp CTGGGCTCCAGAACCAGCCAGTTCTCAGTGACCATCTGCACATCCTaGCCACTCAGAGGCTCCCGCAGCCTCACCTTCACCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LGSRTSQFSVTICTS*PLRGSRSLTFTSSF
Trigger: GAAGCTGGAGGTGAAGGTGAGGCTGCGGGAGCCTCTGAGTGGCCAGGATGTGCAGATGGTCACTGAGAACTGGCTGGTTCTGGAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000470844.5
ENST00000491136.6
CDS CCA 90 bp CTAAGACCTCCTGCAGCTCCGTCTCAGAGCCCTGGGATACCAGCCTaGCAGACACACCAGCAGCTCTGCATCTTCCTCCAGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LRPPAAPSQSPGIPA*QTHQQLCIFLQPFL
Trigger: GAGGAAGGGCTGGAGGAAGATGCAGAGCTGCTGGTGTGTCTGCCAGGCTGGTATCCCAGGGCTCTGAGACGGAGCTGCAGGAGGTCTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS-3UTR CAA 90 bp GGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATGGAAGTGTCCTTGCCAAGAGCCCCATCTGCTaGGCAGCGGCCACCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GVKGLQDSMVQRNGSVLAKSPIC*AAATPW
Trigger: CCAAGGGGTGGCCGCTGCCAAGCAGATGGGGCTCTT...GGCAAGGACACTTCCATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCATCAGGTTGGGAGGGGTaGTCTGACTCCAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VVWDRLPLAHWSHGTLTPSGWEG*SDSKAG
Trigger: CCCTGCCTTGGAGTCAGACAACCCCTCCCAACCTGA...TGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp ACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATTCATGCATCCGAGCCTaGCGCTCGTCCCCACCACTC +
Preference number: 5 (lower is better)
Translates to: TPPSAGEVPDHPQVLPSHSCIRA*RSSPPL
Trigger: GAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGA...ATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTCTCTGGATCACCCTCTaGAAGCCCCGGTGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSLWITL*KPRWFR
Trigger: CCGAAACCACCGGGGCTTCAAGAGGGTGATCCAGAG...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAACTCTGGATCACCCTCTaGAAGCCCCGGTGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQLWITL*KPRWFR
Trigger: CCGAAACCACCGGGGCTTCAAGAGGGTGATCCAGAG...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTGGGAGGCTTTGTCTaGCCTCGTCAGCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQVGGFV*PRQPGG
Trigger: ACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCAC...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS GCA 90 bp CCACTCCAGGGCCTGCTAGGCCTACCATTCTCCCTCTGCGGAAGCTaGCCTAGAAGATGGAGCTCTGGGACTCCAGGAGAAAGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: PLQGLLGLPFSLCGS*PRRWSSGTPGERRA
Trigger: GGCTCTTCTTTCTCCTGGAGTCCCAGAGCTCCATCTTCTAGGGCAGCTTCCGCAGAGGGAGAATGGTAGGCCTAGCAGGCCCTGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 90 bp GCATACACCTCCTCCGCCTTCTGGGAGAGTCGCAGGTCCTCATGGTaGATGAGGATGAAGTCACCCTCCTCATCCGTCAAGGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: AYTSSAFWESRRSSW*MRMKSPSSSVKGEG
Trigger: GCCTTCGCCCTTGACGGATGAGGAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS-3UTR CAA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAAAAGGGCGAAGGCACCTaGGACAGATCAACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEKGEGT*DRSTGL
Trigger: CAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCTT...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGCTGTGCCAACCAGCTaGTCGCTTCTGAAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTAVPTS*SLLKKD
Trigger: GTCCTTCTTCAGAAGCGACAAGCTGGTTGGCACAGC...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAAGCTGTGCCAACCAGCTaGTCGCTTCTGAAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: GVTELSGTGYHWPTGVTEAVPTS*SLLKKD
Trigger: GTCCTTCTTCAGAAGCGACAAGCTGGTTGGCACAGC...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCAGCTGGGGTGACGGAGTaGTCTGGGACAGGCTACCAC +
Preference number: 5 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSAAGVTE*SGTGYH
Trigger: GTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGC...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS TCA 90 bp ACAGGGCAGGCACTGCAGCCACACCTCCCAGGGATGGGAAGAAAGTaGGCACAGGGTCCTGGAATGCAAGGCGGGTTTCAGAGGATCCTA +
Preference number: 5 (lower is better)
Translates to: TGQALQPHLPGMGRK*AQGPGMQGGFQRIL
Trigger: TAGGATCCTCTGAAACCCGCCTTGCATTCCAGGACCCTGTGCTCACTTTCTTCCCATCCCTGGGAGGTGTGGCTGCAGTGCCTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460370.1
CDS CCA 90 bp TGGGCATACACCTCCTCCGCCTTCTGGGAGAGTCGCAGGTCCTCATaGTGGATGAGGATGAAGTCACCCTCCTCATCCGTCAAGGGCGAA +
Preference number: 5 (lower is better)
Translates to: WAYTSSAFWESRRSS*WMRMKSPSSSVKGE
Trigger: TTCGCCCTTGACGGATGAGGAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS-3UTR CAA 90 bp TCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTCTGAGGGCAGCCACTTaGTACTCTCTCTGTCGGGAT +
Preference number: 5 (lower is better)
Translates to: SRNPDTTLSRGGSRSPSSLRAAT*YSLCRD
Trigger: ATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAG...ACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCAGGTCCTGGCTGCGCTaGGCCTGCAGGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVRSWLR*ACRAAR
Trigger: GCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCT...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACTCTGGATCACCCTCTaGAAGCCCCGGTGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALWITL*KPRWFR
Trigger: CCGAAACCACCGGGGCTTCAAGAGGGTGATCCAGAG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCATTAGGAAGCACTGGGTaGGATACACACCCTAAGGGG +
Preference number: 5 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSLGSTG*DTHPKG
Trigger: CCCCTTAGGGTGTGTATCCAACCCAGTGCTTCCTAA...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS TCA 90 bp GGGGCCGCTTTCCTAAGGCCACTGGAGGTGGGATCTCATCCTCATTaGTCTTTCTGCCTCTCCTCACAGAGGCTAGCTGCGACTCCAAGG +
Preference number: 5 (lower is better)
Translates to: GAAFLRPLEVGSHPH*SFCLSSQRLAATPR
Trigger: CCTTGGAGTCGCAGCTAGCCTCTGTGAGGAGAGGCAGAAAGATCAATGAGGATGAGATCCCACCTCCAGTGGCCTTAGGAAAGCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS-3UTR CAA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTCCCGCCTCGCGGTACTaGTTCAGCCTCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSPASRY*FSLCCR
Trigger: CCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGG...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACATGGTGCATGAACTGCTaGGAGAACAGCAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTWCMNC*ENSRHF
Trigger: GAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCA...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCTGGTGCATGAACTGCTaGGAGAACAGCAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLWCMNC*ENSRHF
Trigger: GAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCA...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTGCTGTGCCAACCAGCTaGTCGCTTCTGAAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PPSAGEVPDHPQVLPSHSAVPTS*SLLKKD
Trigger: GTCCTTCTTCAGAAGCGACAAGCTGGTTGGCACAGC...ACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGTCACGGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAATTAGGAAGCACTGGGTaGGATACACACCCTAAGGGG +
Preference number: 5 (lower is better)
Translates to: SHGTLTPPSAGEVPDHPQLGSTG*DTHPKG
Trigger: CCCCTTAGGGTGTGTATCCAACCCAGTGCTTCCTAA...TTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACTGAGGGCAGCCACTTaGTACTCTCTCTGTCGGGAT +
Preference number: 5 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALRAAT*YSLCRD
Trigger: ATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAGGTCCTGGCTGCGCTaGGCCTGCAGGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSRSWLR*ACRAAR
Trigger: GCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCT...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCACAGCAGGCACTTCTCTaGTTGCTCCAGAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: WDRLPLAHWSHGTLTPPSQQALL*LLQKHF
Trigger: AAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTG...TGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTGGAGTCACGGAAAGCTGTTTTGCTTTTTaGAGCCTGGTCCGAGTTAGG +
Preference number: 5 (lower is better)
Translates to: GVTELSGTGYHWPTGVTESCFAF*SLVRVR
Trigger: CCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCT...TTCCGTGACTCCAGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGGCTACCACTGGCCCACTGGAGTCACGGAACCCTGACACCACCCTCAGCAGGGCAAATTCTGGAGAGTTaGTGTTCTTCACCACAGCTG +
Preference number: 5 (lower is better)
Translates to: RLPLAHWSHGTLTPPSAGQILES*CSSPQL
Trigger: CAGCTGTGGTGAAGAACACAAACTCTCCAGAATTTG...CCCTGCTGAGGGTGGTGTCAGGGTTCCGTGACTCCAGTGGGCCAGTGGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GGAACCCTGACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCGACGCATGCATGCCTTaGGCTACAACAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GTLTPPSAGEVPDHPQVLDACMP*ATTKAF
Trigger: AAAGGCCTTTGTTGTAGCCAAAGGCATGCATGCGTC...GAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGTCAGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS TCA 90 bp AAGGCACCTTGGACAGATCAACAGGTCTGCCAGATCGGGCCTGGATaGTCTGAGCCTCAAGCCATTTGGCTACCCGCAGATAGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: KAPWTDQQVCQIGPG*SEPQAIWLPADRLW
Trigger: CCAAAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGATCTGTCCAAGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000491136.6
CDS TCA 90 bp ACTGCTTGGAGAACAGCAGGCACTTCTGAAAATAGAGGCCCAGAGTaGCTCCCGAGCCCAGAGCAGGACCTGCCTTGGTTGGCATTCAAG +
Preference number: 5 (lower is better)
Translates to: TAWRTAGTSENRGPE*LPSPEQDLPWLAFK
Trigger: CTTGAATGCCAACCAAGGCAGGTCCTGCTCTGGGCTCGGGAGTCACTCTGGGCCTCTATTTTCAGAAGTGCCTGCTGTTCTCCAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485966.1
CDS-3UTR CAA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTGGCAATTCAGCAAAGTaGACTTTCCGTCCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVGNSAK*TFRPAR
Trigger: CCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCC...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTGGCCGTGCAGGTTTCTaGGCCACTGGGGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: QQQERPESWSVVHMLNRSGRAGF*ATGACA
Trigger: AGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCC...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTTGGTGCATGAACTGCTaGGAGAACAGCAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVWCMNC*ENSRHF
Trigger: GAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCA...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp ACAGCGGGGAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGTGGAAGATCTCAAACTaGATGCCTTTGCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: TAGRWAPGTQPVSVEPQRWKISN*MPLLWI
Trigger: GATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCA...CCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTCCCCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS TCA 90 bp TACTCCTCTTGGACAGATCAACAGGTCTGCCAGATCGGGCCTGGATaGTCTGAGCCTCAAGCCATTTGGCTACCCGCAGATAGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: YSSWTDQQVCQIGPG*SEPQAIWLPADRLW
Trigger: CCAAAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGATCTGTCCAAGAGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460261.5
CDS-3UTR CAA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAAGAGCCCCATCTGCTaGGCAGCGGCCACCCCTTGG +
Preference number: 5 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGKSPIC*AAATPW
Trigger: CCAAGGGGTGGCCGCTGCCAAGCAGATGGGGCTCTT...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACTCCAGAAGCATTTTTaGCAGCTGGGCATACACCTC +
Preference number: 5 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALQKHF*QLGIHL
Trigger: GAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGGGGCAGCAGGCACTTCTCTaGTTGCTCCAGAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: RSGATGGRGKLYTVATQGQQALL*LLQKHF
Trigger: AAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTG...CCCCTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GAGATGGGCTCCTGGAACCCAGCCTGTTTCTGTAGAGCCCCAGAGGGGCCAACACAAATTCTGGAGAGTTaGTGTTCTTCACCACAGCTG +
Preference number: 5 (lower is better)
Translates to: EMGSWNPACFCRAPEGPTQILES*CSSPQL
Trigger: CAGCTGTGGTGAAGAACACAAACTCTCCAGAATTTG...TGTTGGCCCCTCTGGGGCTCTACAGAAACAGGCTGGGTTCCAGGAGCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCAGCTGGGGTGACGGAGTaGTCTGGGACAGGCTACCAC +
Preference number: 5 (lower is better)
Translates to: LWCLGSSISYVQRLLKPAAGVTE*SGTGYH
Trigger: GTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGC...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTCCTGGGAGGTGGGGGTaGCAGCGAGCTGAGATCATG +
Preference number: 5 (lower is better)
Translates to: QQQERPESWSVVHMLNRSPGRWG*QRAEIM
Trigger: CATGATCTCAGCTCGCTGCAACCCCCACCTCCCAGG...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS TCA 90 bp CAAGCTTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCAGGCACTTCTCTTGTTGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: QASQIGWSQPRCPGA*TAWRTAGTSLVAPE
Trigger: TTCTGGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS TCA 90 bp CAAGCTTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCAGGCACTTCTGAAAATAGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: QASQIGWSQPRCPGA*TAWRTAGTSENRGP
Trigger: TGGGCCTCTATTTTCAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485966.1
CDS-3UTR CAA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGTCAGGTTGGGAGGGGTaGTCTGACTCCAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKSGWEG*SDSKAG
Trigger: CCCTGCCTTGGAGTCAGACAACCCCTCCCAACCTGA...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTCAGGTTGGGAGGGGTaGTCTGACTCCAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QQQERPESWSVVHMLNRSSGWEG*SDSKAG
Trigger: CCCTGCCTTGGAGTCAGACAACCCCTCCCAACCTGA...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACCCGCCTCGCGGTACTaGTTCAGCCTCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTPASRY*FSLCCR
Trigger: CCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTAAGGGCGAAGGCACCTaGGACAGATCAACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSKGEGT*DRSTGL
Trigger: CAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCTT...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGAGCTGTTTTGCTTTTTaGAGCCTGGTCCGAGTTAGG +
Preference number: 5 (lower is better)
Translates to: PVSVEPQRGQQQERPESWSCFAF*SLVRVR
Trigger: CCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCT...CCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTCTGAAGAAGGACCCTTaGTGGAAGATCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: PPSAGEVPDHPQVLPSHSLKKDP*WKISNL
Trigger: CAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAG...ACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTACAGGTCTTTGGTGCTaGGGTAGCAGCATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: HPQQGRFPITLKFSHPIVTGLWC*GSSISY
Trigger: ATAAGAGATGCTGCTACCCAAGCACCAAAGACCTGT...AACTATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp ACAGGCAGAGCTGGGGTGACGGAGTTGTCTGGGACAGGCTACCACTGGCCCACTTACAAAGCTCAGTTCTaGAGCTGTGCTTATGCAATA +
Preference number: 5 (lower is better)
Translates to: TGRAGVTELSGTGYHWPTYKAQF*SCAYAI
Trigger: TATTGCATAAGCACAGCTCAAGAACTGAGCTTTGTA...AGTGGGCCAGTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGCTCTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS TCA 90 bp CAAGCTTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCAGGCACTTACGCACATCACAATGTT +
Preference number: 5 (lower is better)
Translates to: QASQIGWSQPRCPGA*TAWRTAGTYAHHNV
Trigger: AACATTGTGATGTGCGTAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494789.1
CDS GCA 90 bp TTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATGAACTaGTTGGAGAACAGCAGGCACTTCTCTTGTTGCTCCAGAAGCATT +
Preference number: 5 (lower is better)
Translates to: FSNRVVSATLPWCMN*LENSRHFSCCSRSI
Trigger: AATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS-3UTR CAA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACATCATGCATCCGAGCCTaGCGCTCGTCCCCACCACTC +
Preference number: 5 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTSCIRA*RSSPPL
Trigger: GAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGA...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CCTGTTTCTGTAGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTGCTCGAATAGCATCTaGATATTGCTTGGCAATGCG +
Preference number: 5 (lower is better)
Translates to: PVSVEPQRGQQQERPESWCSNSI*ILLGNA
Trigger: CGCATTGCCAAGCAATATCAAGATGCTATTCGAGCA...CCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCTACAGAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TGGATACACACCCTAAGGGGAGTAGGTTGGGTTAGGAACCCTTCCAGTCACCTTGGCAATTCAGCAAAGTaGACTTTCCGTCCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: WIHTLRGVGWVRNPSSHLGNSAK*TFRPAR
Trigger: CCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCC...AAGGTGACTGGAAGGGTTCCTAACCCAACCTACTCCCCTTAGGGTGTGTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGAAGGGCGAAGGCACCTaGGACAGATCAACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: QERPESWSVVHMLNRSLVKGEGT*DRSTGL
Trigger: CAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCTT...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AGAGCCCCAGAGGGGCCAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACTGAAGAAGGACCCTTaGTGGAAGATCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: RAPEGPTTGKTRVVVSSALKKDP*WKISNL
Trigger: CAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAG...TGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTGGCCCCTCTGGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAGCTGGGGTGACGGAGTaGTCTGGGACAGGCTACCAC +
Preference number: 5 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPAGVTE*SGTGYH
Trigger: GTGGTAGCCTGTCCCAGACAACTCCGTCACCCCAGC...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTGTCTTGCCTCGTCTCACTTCTGATAAGATaGGCCAGCCGGGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: PFKNFNLQVWWEALSCLVSLLIR*ASRVRW
Trigger: CCACCGCACCCGGCTGGCCAATCTTATCAGAAGTGA...GACGAGGCAAGACAAAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS GCA 90 bp TTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATGAACTaGTTGGAGAACAGCAGGCACTTACGCACATCACAATGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FSNRVVSATLPWCMN*LENSRHLRTSQCSF
Trigger: GAAAGAACATTGTGATGTGCGTAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494789.1
CDS-3UTR CAA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTGGGATCTCATCCTCATaGATCTTTCTGCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSGISSS*IFLPLL
Trigger: GAGGAGAGGCAGAAAGATCAATGAGGATGAGATCCC...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CAACAACAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTCTGAGGGCAGCCACTTaGTACTCTCTCTGTCGGGAT +
Preference number: 5 (lower is better)
Translates to: QQQERPESWSVVHMLNRSLRAAT*YSLCRD
Trigger: ATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAG...AGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTGTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACACAGTTGCCACGCAGTGCTCGAATAGCATCTaGATATTGCTTGGCAATGCG +
Preference number: 5 (lower is better)
Translates to: SRSGATGGRGKLYTVATQCSNSI*ILLGNA
Trigger: CGCATTGCCAAGCAATATCAAGATGCTATTCGAGCA...CTGCGTGGCAACTGTGTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp ACACCACCCTCAGCAGGGGAGGTTCCCGATCACCCTCAAGTTCTCCCATCCCATTACAAAGCTCAGTTCTaGAGCTGTGCTTATGCAATA +
Preference number: 5 (lower is better)
Translates to: TPPSAGEVPDHPQVLPSHYKAQF*SCAYAI
Trigger: TATTGCATAAGCACAGCTCAAGAACTGAGCTTTGTA...ATGGGATGGGAGAACTTGAGGGTGATCGGGAACCTCCCCTGCTGAGGGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCAACCTTCTCACTTCTGATAAGATaGGCCAGCCGGGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: QLTVFSLGWVDQTQDPTFSLLIR*ASRVRW
Trigger: CCACCGCACCCGGCTGGCCAATCTTATCAGAAGTGA...GAAGGTTGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACAGTCTGGTGGGAGGCTTaGTCTTGCCTCGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTVWWEA*SCLVSL
Trigger: CAGGCTGACGAGGCAAGACAAAGCCTCCCACCAGAC...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS GCA 90 bp ATCCAGGACCTGTGGAATCCATTGAGTTCATGGAAACAAGGAGGCTaGCTTCTCCTGGGTCCCTCTGTGAGATTTCTCAGACCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: IQDLWNPLSSWKQGG*LLLGPSVRFLRPSE
Trigger: TTCAGAAGGTCTGAGAAATCTCACAGAGGGACCCAGGAGAAGGCAGCCTCCTTGTTTCCATGAACTCAATGGATTCCACAGGTCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS-3UTR CAA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATTCCAGTCACCTTTCTTaGCTCTATAGGTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNSSHLS*LYRSSY
Trigger: ATAAGATGACCTATAGAGCAAAGAAAGGTGACTGGA...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS CCA 90 bp AAGAATATGTACCTTATTGGGCTTGTTAGTATGGACAACAGGGTCTaGGTTTACCCCTCACCTGCTATTCTCCCCACCAGCCCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: KNMYLIGLVSMDNRV*VYPSPAILPTSPGV
Trigger: AACTCCAGGGCTGGTGGGGAGAATAGCAGGTGAGGGGTAAACCCAGACCCTGTTGTCCATACTAACAAGCCCAATAAGGTACATATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS-3UTR CAA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTCAAATTCTGGAGAGTTaGTGTTCTTCACCACAGCTG +
Preference number: 5 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSQILES*CSSPQL
Trigger: CAGCTGTGGTGAAGAACACAAACTCTCCAGAATTTG...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CAGGAAAGACCAGAGTCGTGGTCAGTAGTGCACATGCTTAACAGGTCTTTGGTGCCCCGGTGGTTTCGGTaGATGTTTAGTTTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: QERPESWSVVHMLNRSLVPRWFR*MFSLKS
Trigger: ACTCTTCAAACTAAACATCAACCGAAACCACCGGGG...CACCAAAGACCTGTTAAGCATGTGCACTACTGACCACGACTCTGGTCTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GGAAGCATGGTCCAGCCCTGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTTCAAACTTGATGCCTTaGCTCTGGATCACCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GSMVQPCYPPKGHIQSSVSNLMP*LWITLL
Trigger: CAAGAGGGTGATCCAGAGCAAAGGCATCAAGTTTGA...AACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACAGGGCTGGACCATGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CACAGTTGCCACGCAGGGGTTAAGGGGCTGCAGGACTCCATGGTACAGAGGAATTTTCATTCTAGATTATaGCTGTGTTGCATACACGTG +
Preference number: 5 (lower is better)
Translates to: HSCHAGVKGLQDSMVQRNFHSRL*LCCIHV
Trigger: CACGTGTATGCAACACAGCAATAATCTAGAATGAAA...ATTCCTCTGTACCATGGAGTCCTGCAGCCCCTTAACCCCTGCGTGGCAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS GCA 90 bp AGGAACAGGCAATTCAGCAAAGTTGACTTTCCGTCCTGCTCGGTGTaGTCGAATAGCATCTTGATATTGCTTGGCAATGCGCTCATGCAT +
Preference number: 5 (lower is better)
Translates to: RNRQFSKVDFPSCSV*SNSILILLGNALMH
Trigger: ATGCATGAGCGCATTGCCAAGCAATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 90 bp AAATCCTGGAGGAACAGGCAATTCAGCAAAGTTGACTTTCCGTCCTaGTCGGTGTGCTCGAATAGCATCTTGATATTGCTTGGCAATGCG +
Preference number: 5 (lower is better)
Translates to: KSWRNRQFSKVDFPS*SVCSNSILILLGNA
Trigger: CGCATTGCCAAGCAATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS-3UTR CAA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTCCCGCCTCGCGGTACTaGTTCAGCCTCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VLELCLCNTIVISKLNVFPASRY*FSLCCR
Trigger: CCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGG...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACAGGCAATTCAGCAAAGTaGACTTTCCGTCCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTGNSAK*TFRPAR
Trigger: CCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCC...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGCTCCAGAAGCATTTTTaGCAGCTGGGCATACACCTC +
Preference number: 5 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGLQKHF*QLGIHL
Trigger: GAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAG...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp CCACTGTGTCCCGCCTGTTTCCTGTATGTGGATAAATCTCAGGACAAGATGAAGAGCTGTTTTGCTTTTTaGAGCCTGGTCCGAGTTAGG +
Preference number: 5 (lower is better)
Translates to: PLCPACFLYVDKSQDKMKSCFAF*SLVRVR
Trigger: CCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCT...CTTCATCTTGTCCTGAGATTTATCCACATACAGGAAACAGGCGGGACACAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp TCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACTCAAACTTGATGCCTTaGCTCTGGATCACCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SFKGTSRSGATGGRGKLYSNLMP*LWITLL
Trigger: CAAGAGGGTGATCCAGAGCAAAGGCATCAAGTTTGA...GTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp CTTTGGTGCTTGGGTAGCAGCATCTCTTATGTACAAAGGCTTCTGAAGCCAGCAACAGGTCTTTGGTGCTaGGGTAGCAGCATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: LWCLGSSISYVQRLLKPATGLWC*GSSISY
Trigger: ATAAGAGATGCTGCTACCCAAGCACCAAAGACCTGT...TGCTGGCTTCAGAAGCCTTTGTACATAAGAGATGCTGCTACCCAAGCACCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp GCCTTTGGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGGACGCATGCATGCCTTaGGCTACAACAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: AFGYNKGLLRTSISKSGGDACMP*ATTKAF
Trigger: AAAGGCCTTTGTTGTAGCCAAAGGCATGCATGCGTC...CCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp TTTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCGGGATCTCATCCTCATaGATCTTTCTGCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: FLPVNSLFSWVGRPNPRSGISSS*IFLPLL
Trigger: GAGGAGAGGCAGAAAGATCAATGAGGATGAGATCCC...GGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp TTCCCGATCACCCTCAAGTTCTCCCATCCCATAGTTAGATCTTTTAAAGGCACACTCCAGAAGCATTTTTaGCAGCTGGGCATACACCTC +
Preference number: 5 (lower is better)
Translates to: FPITLKFSHPIVRSFKGTLQKHF*QLGIHL
Trigger: GAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAG...TGTGCCTTTAAAAGATCTAACTATGGGATGGGAGAACTTGAGGGTGATCGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp TCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTAAGCTGTACTGGAAGATCTCAAACTaGATGCCTTTGCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: SFKGTSRSGATGGRGKLYWKISN*MPLLWI
Trigger: GATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCA...GTACAGCTTACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AAATCTCTTACAACTACAAACCCCTTCATAGTCTCCATCCATTCAGAAAAACAACCTGGGAGGTGGGGGTaGCAGCGAGCTGAGATCATG +
Preference number: 5 (lower is better)
Translates to: KSLTTTNPFIVSIHSEKQPGRWG*QRAEIM
Trigger: CATGATCTCAGCTCGCTGCAACCCCCACCTCCCAGG...TTGTTTTTCTGAATGGATGGAGACTATGAAGGGGTTTGTAGTTGTAAGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp ATAGTTAGATCTTTTAAAGGCACATCTAGAAGTGGTGCAACTGGAGGCAGGGGTCCCCGGTGGTTTCGGTaGATGTTTAGTTTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: IVRSFKGTSRSGATGGRGPRWFR*MFSLKS
Trigger: ACTCTTCAAACTAAACATCAACCGAAACCACCGGGG...ACCCCTGCCTCCAGTTGCACCACTTCTAGATGTGCCTTTAAAAGATCTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
CDS-3UTR CAA 90 bp AAATCTCTTACAACTACAAACCCCTTCATAGTCTCCATCCATTCAGAAAAACAAGTGGGAGGCTTTGTCTaGCCTCGTCAGCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KSLTTTNPFIVSIHSEKQVGGFV*PRQPGG
Trigger: ACCTCCAGGCTGACGAGGCAAGACAAAGCCTCCCAC...TTGTTTTTCTGAATGGATGGAGACTATGAAGGGGTTTGTAGTTGTAAGAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp AAGGAAGTTCCCCACATAACCAGCCGAAGAGGAAAGGCTTTCCCTGTCCTCTCTAGAAGAAAGTGTGCATaGCATGAGATCAAAGAATTG +
Preference number: 5 (lower is better)
Translates to: KEVPHITSRRGKAFPVLSRRKCA*HEIKEL
Trigger: CAATTCTTTGATCTCATGCAATGCACACTTTCTTCT...AGAGAGGACAGGGAAAGCCTTTCCTCTTCGGCTGGTTATGTGGGGAACTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GGAAGCATGGTCCAGCCCTGTTATCCCCCAAAAGGACACATACAAAGCTCAGTTAGAAGAAAGTGTGCATaGCATGAGATCAAAGAATTG +
Preference number: 5 (lower is better)
Translates to: GSMVQPCYPPKGHIQSSVRRKCA*HEIKEL
Trigger: CAATTCTTTGATCTCATGCAATGCACACTTTCTTCT...AACTGAGCTTTGTATGTGTCCTTTTGGGGGATAACAGGGCTGGACCATGCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTCAGCAGGCACTTCTCTaGTTGCTCCAGAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTQQALL*LLQKHF
Trigger: AAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTG...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GCTAATCACCCTCCTTTTCATTCTAGATTATTGCTGTGTTGCATACACGTGACTTCAAACTTGATGCCTTaGCTCTGGATCACCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ANHPPFHSRLLLCCIHVTSNLMP*LWITLL
Trigger: CAAGAGGGTGATCCAGAGCAAAGGCATCAAGTTTGA...AGTCACGTGTATGCAACACAGCAATAATCTAGAATGAAAAGGAGGGTGATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GGCTACAACAAAGGCCTTTTAAGAACTTCAATCTCCAAGTCTGGTGGGAGGCTTTCCAGTCACCTTTCTTaGCTCTATAGGTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: GYNKGLLRTSISKSGGRLSSHLS*LYRSSY
Trigger: ATAAGATGACCTATAGAGCAAAGAAAGGTGACTGGA...AAGCCTCCCACCAGACTTGGAGATTGAAGTTCTTAAAAGGCCTTTGTTGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS TCA 90 bp CCTCATGGTTGTCAAGTGGTCAGGAGGAGTAAACAACAGGATAAGTaGTCACCCAGAAAAGAGGATAAATTTGTATTCACTGCCATATGT +
Preference number: 5 (lower is better)
Translates to: PHGCQVVRRSKQQDK*SPRKEDKFVFTAIC
Trigger: ACATATGGCAGTGAATACAAATTTATCCTCTTTTCTGGGTGATCACTTATCCTGTTGTTTACTCCTCCTGACCACTTGACAACCATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470844.5
CDS-3UTR CAA 90 bp TTCTTCCAGTTAACAGTCTTTTCTCTTGGGTGGGTAGACCAAACCCAAGATCCATTTCATTCTAGATTATaGCTGTGTTGCATACACGTG +
Preference number: 5 (lower is better)
Translates to: FFQLTVFSLGWVDQTQDPFHSRL*LCCIHV
Trigger: CACGTGTATGCAACACAGCAATAATCTAGAATGAAA...TGGATCTTGGGTTTGGTCTACCCACCCAAGAGAAAAGACTGTTAACTGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTACAGGTCTTTGGTGCTaGGGTAGCAGCATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: VLELCLCNTIVISKLNVFTGLWC*GSSISY
Trigger: ATAAGAGATGCTGCTACCCAAGCACCAAAGACCTGT...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS-3UTR CAA 90 bp GTTCTTGAGCTGTGCTTATGCAATACTATAGTGATCAGTAAGCTGAATGTATTTTGCTCGAATAGCATCTaGATATTGCTTGGCAATGCG +
Preference number: 5 (lower is better)
Translates to: VLELCLCNTIVISKLNVFCSNSI*ILLGNA
Trigger: CGCATTGCCAAGCAATATCAAGATGCTATTCGAGCA...AAATACATTCAGCTTACTGATCACTATAGTATTGCATAAGCACAGCTCAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284376.8
ENST00000371586.6
CDS CCA 72 bp GCCCCATCTGCTTGGCAGCGGCCACCCCTTGGCCTCTaGCCTGAGGGCCCTTCCGAGGTCTTGGCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: APSAWQRPPLGL*PEGPSEVLALA
Trigger: TGCCAGGGCCAAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGGGTGGCCGCTGCCAAGCAGATGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000491136.6
CDS CAA 72 bp AGATACCTCGCGGTGAATCCGAGCCAAACCCCGGCCTaGTCTCACCCGGCACCGCCCTGGGCTCCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: RYLAVNPSQTPA*SHPAPPWAPAG
Trigger: GCCCGCGGGAGCCCAGGGCGGTGCCGGGTGAGACAAGGCCGGGGTTTGGCTCGGATTCACCGCGAGGTATCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000491136.6
CDS GCA 72 bp GAGCCTTGCGCTCGTCCCCACCACTCCGGGCCTGGATaGCCGCCTCGCGGTACTTGTTCAGCCTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: EPCARPHHSGPG*PPRGTCSASAA
Trigger: TGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 72 bp GGGCGGCTGCTGGGGGAGGGTCCTGGAAAGGGTGACTaGAGCCTTGCTGTGCAGGCCAGGCCACACACGTGT +
Preference number: 6 (lower is better)
Translates to: GRLLGEGPGKGD*SLAVQARPHTC
Trigger: ACACGTGTGTGGCCTGGCCTGCACAGCAAGGCTGCAGTCACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 72 bp GCGACTCCAAGGTCTTCAGGCCGCGCTCGCAGCGCCTaGCTTTGGCTGCTTCGCCTGCCTCCTTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: ATPRSSGRARSA*LWLLRLPPWHW
Trigger: CCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCGGCCTGAAGACCTTGGAGTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 72 bp ATCCGAGCCTTGCGCTCGTCCCCACCACTCCGGGCCTaGATGCCCGCCTCGCGGTACTTGTTCAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: IRALRSSPPLRA*MPASRYLFSLC
Trigger: GCAGAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CAA 90 bp TGGGGCGGCTGCTGGGGGAGGGTCCTGGAAAGGGTGACTGCAGCCTaGCTGTGCAGGCCAGGCCACACACGTGTTACGTCTGGGCGCACA +
Preference number: 6 (lower is better)
Translates to: WGGCWGRVLERVTAA*LCRPGHTRVTSGRT
Trigger: TGTGCGCCCAGACGTAACACGTGTGTGGCCTGGCCTGCACAGCAAGGCTGCAGTCACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 72 bp CCCTTGGCCTCTGGCCTGAGGGCCCTTCCGAGGTCTTaGCCCTGGCATCATGGCAGCCTAGATACCTCGCGG +
Preference number: 6 (lower is better)
Translates to: PLASGLRALPRS*PWHHGSLDTSR
Trigger: CCGCGAGGTATCTAGGCTGCCATGATGCCAGGGCCAAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000491136.6
CDS CCA 72 bp GCTGGGATGAAGGGACTGTGGGCCGTGCAGGTTTCTTaGCCACTGGGGCCTGTGCTGGGGGCTCACCCTGCA +
Preference number: 6 (lower is better)
Translates to: AGMKGLWAVQVS*PLGPVLGAHPA
Trigger: TGCAGGGTGAGCCCCCAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371586.6
ENST00000491136.6
CDS CAA 72 bp CCACCACTCCGGGCCTGGATGCCCGCCTCGCGGTACTaGTTCAGCCTCTGCTGCAGGGCATCCAGCACTGTC +
Preference number: 6 (lower is better)
Translates to: PPLRAWMPASRY*FSLCCRASSTV
Trigger: GACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CAA 90 bp GCACGGTCTAGCTCTCCAGCCCGCTTGGCACTGAGGGCAGCCACTTaGTACTCTCTCTGTCGGGATGACAGCAGGGCCCGCGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: ARSSSPARLALRAAT*YSLCRDDSRARGSG
Trigger: CCCAGACCCGCGGGCCCTGCTGTCATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCTAGACCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS TCA 72 bp GGGCCCTCCTCCAGAACCCACCTGAGCTGCTGGGGCTaGAGCTGTCAGGACGGCTGTCTGCACTGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: GPSSRTHLSCWG*SCQDGCLHWRF
Trigger: GAACCTCCAGTGCAGACAGCCGTCCTGACAGCTTCAGCCCCAGCAGCTCAGGTGGGTTCTGGAGGAGGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 72 bp CTTGCTGTGCAGGCCAGGCCACACACGTGTTACGTCTaGGCGCACAGGAGCATCAGAGGCACAGGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LAVQARPHTCYV*AHRSIRGTGAL
Trigger: GAGGGCCCCTGTGCCTCTGATGCTCCTGTGCGCCCAGACGTAACACGTGTGTGGCCTGGCCTGCACAGCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS GCA 72 bp CTCCTCCTCCTCCTCCTCCACATCCCGCATACAGTCTaGCGCCAACTTCTCGATGTGGGCCATGGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LLLLLLHIPHTV*RQLLDVGHGQG
Trigger: CCCCTGCCCATGGCCCACATCGAGAAGTTGGCGGCAGACTGTATGCGGGATGTGGAGGAGGAGGAGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000491136.6
CDS CAA 72 bp GGCCTGCCCCTTGGGTGCTGGCTTCTTGCCTGTGGTTaGTGCTTCCCCTGTGAGAGCCAGCAGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: GLPLGCWLLACG*CFPCESQQLSL
Trigger: GAGGCTGAGCTGCTGGCTCTCACAGGGGAAGCACAAACCACAGGCAAGAAGCCAGCACCCAAGGGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000491136.6
CDS CAA 72 bp AGCTCTCCAGCCCGCTTGGCACTGAGGGCAGCCACTTaGTACTCTCTCTGTCGGGATGACAGCAGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SSPARLALRAAT*YSLCRDDSRAR
Trigger: GCGGGCCCTGCTGTCATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CAA 90 bp TTGAGGCTGGCTGCCACGGAGGAGTTTCTTGTGCTCAGTTTCTGCTaGGGGCGGCTGCTGGGGGAGGGTCCTGGAAAGGGTGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: LRLAATEEFLVLSFC*GRLLGEGPGKGDCS
Trigger: GCTGCAGTCACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCCCAAGCAGAAACTGAGCACAAGAAACTCCTCCGTGGCAGCCAGCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS TCA 72 bp CTCGGGCACGGTCTAGCTCTCCAGCCCGCTTGGCACTaGGGGCAGCCACTTTGTACTCTCTCTGTCGGGATG +
Preference number: 6 (lower is better)
Translates to: LGHGLALQPAWH*GQPLCTLSVGM
Trigger: CATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCTAGACCGTGCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 72 bp GCCTGGCTTTGGCTGCTTCGCCTGCCTCCTTGGCACTaGCCGCAGCCTCTCGGTAGTTGTGAATCCGTTCCT +
Preference number: 6 (lower is better)
Translates to: AWLWLLRLPPWH*PQPLGSCESVP
Trigger: AGGAACGGATTCACAACTACCGAGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 72 bp CTGCCACGGAGGAGTTTCTTGTGCTCAGTTTCTGCTTaGGGCGGCTGCTGGGGGAGGGTCCTGGAAAGGGTG +
Preference number: 6 (lower is better)
Translates to: LPRRSFLCSVSA*GGCWGRVLERV
Trigger: CACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCCCAAGCAGAAACTGAGCACAAGAAACTCCTCCGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CAA 72 bp TGCTGGGGGAGGGTCCTGGAAAGGGTGACTGCAGCCTaGCTGTGCAGGCCAGGCCACACACGTGTTACGTCT +
Preference number: 6 (lower is better)
Translates to: CWGRVLERVTAA*LCRPGHTRVTS
Trigger: AGACGTAACACGTGTGTGGCCTGGCCTGCACAGCAAGGCTGCAGTCACCCTTTCCAGGACCCTCCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CAA 72 bp GCTGCCACGGAGGAGTTTCTTGTGCTCAGTTTCTGCTaGGGGCGGCTGCTGGGGGAGGGTCCTGGAAAGGGT +
Preference number: 6 (lower is better)
Translates to: AATEEFLVLSFC*GRLLGEGPGKG
Trigger: ACCCTTTCCAGGACCCTCCCCCAGCAGCCGCCCCAAGCAGAAACTGAGCACAAGAAACTCCTCCGTGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS TCA 72 bp CCTCCAGGACAGCACCGAATCTCTTCCCAATCCTCATaGGCTCTCGGGCACGGTCTAGCTCTCCAGCCCGCT +
Preference number: 6 (lower is better)
Translates to: PPGQHRISSQSS*ALGHGLALQPA
Trigger: AGCGGGCTGGAGAGCTAGACCGTGCCCGAGAGCTCATGAGGATTGGGAAGAGATTCGGTGCTGTCCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 72 bp GCCTGGATGCCCGCCTCGCGGTACTTGTTCAGCCTCTaGTGCAGGGCATCCAGCACTGTCTGTGACTCTGTA +
Preference number: 6 (lower is better)
Translates to: AWMPASRYLFSL*CRASSTVCDSV
Trigger: TACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 72 bp CCACTCCAGGGCCTGCTAGGCCTACCATTCTCCCTCTaGGGAAGCTGCCCTAGAAGATGGAGCTCTGGGACT +
Preference number: 6 (lower is better)
Translates to: PLQGLLGLPFSL*GSCPRRWSSGT
Trigger: AGTCCCAGAGCTCCATCTTCTAGGGCAGCTTCCGCAGAGGGAGAATGGTAGGCCTAGCAGGCCCTGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CAA 90 bp CCAATCCTCATGAGCTCTCGGGCACGGTCTAGCTCTCCAGCCCGCTaGGCACTGAGGGCAGCCACTTTGTACTCTCTCTGTCGGGATGAC +
Preference number: 6 (lower is better)
Translates to: PILMSSRARSSSPAR*ALRAATLYSLCRDD
Trigger: GTCATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCTAGACCGTGCCCGAGAGCTCATGAGGATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS TCA 72 bp AAAGCTGGGAAAGTCATCTCCTGCACAGTCGCGGCCTaGCTCCTCTCCTGGTGCTGGCCATCGGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: KAGKVISCTVAA*LLSWCWPSASP
Trigger: AGGTGAAGCCGATGGCCAGCACCAGGAGAGGAGTCAGGCCGCGACTGTGCAGGAGATGACTTTCCCAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438021.5
CDS TCA 72 bp GCACTGCAGCCACACCTCCCAGGGATGGGAAGAAAGTaGGCACAGGGTCCTGGAATGCAAGGCGGGTTTCAG +
Preference number: 6 (lower is better)
Translates to: ALQPHLPGMGRK*AQGPGMQGGFQ
Trigger: CTGAAACCCGCCTTGCATTCCAGGACCCTGTGCTCACTTTCTTCCCATCCCTGGGAGGTGTGGCTGCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460370.1
CDS GCA 72 bp GGCCTGCTAGGCCTACCATTCTCCCTCTGCGGAAGCTaGCCTAGAAGATGGAGCTCTGGGACTCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: GLLGLPFSLCGS*PRRWSSGTPGE
Trigger: TTCTCCTGGAGTCCCAGAGCTCCATCTTCTAGGGCAGCTTCCGCAGAGGGAGAATGGTAGGCCTAGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 72 bp AGTCTGAAACGGGCTGGGCAGAAATGCCAGGGAGGCTaGTCTCAGGTTGGGAGGGGTTGTCTGACTCCAAGG +
Preference number: 6 (lower is better)
Translates to: SLKRAGQKCQGG*SQVGRGCLTPR
Trigger: CCTTGGAGTCAGACAACCCCTCCCAACCTGAGACCAGCCTCCCTGGCATTTCTGCCCAGCCCGTTTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000491136.6
CDS CCA 72 bp ACCTCCTCCGCCTTCTGGGAGAGTCGCAGGTCCTCATaGTGGATGAGGATGAAGTCACCCTCCTCATCCGTC +
Preference number: 6 (lower is better)
Translates to: TSSAFWESRRSS*WMRMKSPSSSV
Trigger: GACGGATGAGGAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 72 bp AGAACCAGCCAGTTCTCAGTGACCATCTGCACATCCTaGCCACTCAGAGGCTCCCGCAGCCTCACCTTCACC +
Preference number: 6 (lower is better)
Translates to: RTSQFSVTICTS*PLRGSRSLTFT
Trigger: GGTGAAGGTGAGGCTGCGGGAGCCTCTGAGTGGCCAGGATGTGCAGATGGTCACTGAGAACTGGCTGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000460370.1
ENST00000470844.5
ENST00000491136.6
CDS CAA 72 bp ATGAGCTCTCGGGCACGGTCTAGCTCTCCAGCCCGCTaGGCACTGAGGGCAGCCACTTTGTACTCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: MSSRARSSSPAR*ALRAATLYSLC
Trigger: ACAGAGAGAGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCTAGACCGTGCCCGAGAGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 72 bp CGGGTGGTCTCAGCCACGTTGCCCTGGTGCATGAACTaGTTGGAGAACAGCAGGCACTTCTCTTGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: RVVSATLPWCMN*LENSRHFSCCS
Trigger: GGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CAA 90 bp AGGGGCCGCTTTCCTAAGGCCACTGGAGGTGGGATCTCATCCTCATaGATCTTTCTGCCTCTCCTCACAGAGGCTAGCTGCGACTCCAAG +
Preference number: 6 (lower is better)
Translates to: RGRFPKATGGGISSS*IFLPLLTEASCDSK
Trigger: CTTGGAGTCGCAGCTAGCCTCTGTGAGGAGAGGCAGAAAGATCAATGAGGATGAGATCCCACCTCCAGTGGCCTTAGGAAAGCGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 72 bp CGGGTGGTCTCAGCCACGTTGCCCTGGTGCATGAACTaGTTGGAGAACAGCAGGCACTTACGCACATCACAA +
Preference number: 6 (lower is better)
Translates to: RVVSATLPWCMN*LENSRHLRTSQ
Trigger: TTGTGATGTGCGTAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494789.1
CDS TCA 72 bp TGGACAGATCAACAGGTCTGCCAGATCGGGCCTGGATaGTCTGAGCCTCAAGCCATTTGGCTACCCGCAGAT +
Preference number: 6 (lower is better)
Translates to: WTDQQVCQIGPG*SEPQAIWLPAD
Trigger: ATCTGCGGGTAGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGATCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS TCA 72 bp CAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCAGGCACTTACGCACAT +
Preference number: 6 (lower is better)
Translates to: QIGWSQPRCPGA*TAWRTAGTYAH
Trigger: ATGTGCGTAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494789.1
CDS GCA 72 bp TTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTaGATGAACTGCTTGGAGAACAGCAGGCACTTACGC +
Preference number: 6 (lower is better)
Translates to: FSNRVVSATLPW*MNCLENSRHLR
Trigger: GCGTAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494789.1
CDS CCA 72 bp AGCTTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTaGTGCATGAACTGCTTGGAGAACAGCAGGCACTTC +
Preference number: 6 (lower is better)
Translates to: SFSNRVVSATLP*CMNCLENSRHF
Trigger: GAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000485966.1
ENST00000491136.6
CDS CAA 90 bp CTTGGAGAACAGCAGGCACTTCTCTTGTTGCTCCAGAAGCATTTTTaGCAGCTGGGCATACACCTCCTCCGCCTTCTGGGAGAGTCGCAG +
Preference number: 6 (lower is better)
Translates to: LGEQQALLLLLQKHF*QLGIHLLRLLGESQ
Trigger: CTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS TCA 72 bp CAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCAGGCACTTCTCTTGTT +
Preference number: 6 (lower is better)
Translates to: QIGWSQPRCPGA*TAWRTAGTSLV
Trigger: AACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 72 bp TTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTaGATGAACTGCTTGGAGAACAGCAGGCACTTCTCT +
Preference number: 6 (lower is better)
Translates to: FSNRVVSATLPW*MNCLENSRHFS
Trigger: AGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS GCA 72 bp CTCACACTCATTCTCCAGCCGCTCCAGTTTCAGGTGTaGTGTGCCAACCAGCTTGTCGCTTCTGAAGAAGGA +
Preference number: 6 (lower is better)
Translates to: LTLILQPLQFQV*CANQLVASEEG
Trigger: TCCTTCTTCAGAAGCGACAAGCTGGTTGGCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000460370.1
ENST00000470844.5
ENST00000491136.6
CDS CCA 72 bp AGCCTAAAAGCCTTAAGGCAGGAAGCAAAGGCTCACTaGAGAGGCCAGAGGCCATGGCAGAGGCAAATACAG +
Preference number: 6 (lower is better)
Translates to: SLKALRQEAKAH*RGQRPWQRQIQ
Trigger: CTGTATTTGCCTCTGCCATGGCCTCTGGCCTCTCCAGTGAGCCTTTGCTTCCTGCCTTAAGGCTTTTAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 72 bp CCTTCCATCCAGGACCTGTGGAATCCATTGAGTTCATaGAAACAAGGAGGCTGCCTTCTCCTGGGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: PSIQDLWNPLSS*KQGGCLLLGPS
Trigger: AGAGGGACCCAGGAGAAGGCAGCCTCCTTGTTTCCATGAACTCAATGGATTCCACAGGTCCTGGATGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 72 bp AGCTTCTCAAATCGGGTGGTCTCAGCCACGTTGCCCTaGTGCATGAACTGCTTGGAGAACAGCAGGCACTTA +
Preference number: 6 (lower is better)
Translates to: SFSNRVVSATLP*CMNCLENSRHL
Trigger: TAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494789.1
CDS CAA 72 bp CAGCAGGCACTTCTCTTGTTGCTCCAGAAGCATTTTTaGCAGCTGGGCATACACCTCCTCCGCCTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: QQALLLLLQKHF*QLGIHLLRLLG
Trigger: TCCCAGAAGGCGGAGGAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS TCA 72 bp CAAATCGGGTGGTCTCAGCCACGTTGCCCTGGTGCATaGACTGCTTGGAGAACAGCAGGCACTTCTGAAAAT +
Preference number: 6 (lower is better)
Translates to: QIGWSQPRCPGA*TAWRTAGTSEN
Trigger: ATTTTCAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485966.1
CDS TCA 72 bp TGGAGCCGGGGCTCTGGGTTCAGAAAGACCTTGGTTTaGATCCTAGTTCTGCTATTTCCTAGCTGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: WSRGSGFRKTLV*ILVLLFPSWVS
Trigger: GGACACCCAGCTAGGAAATAGCAGAACTAGGATTCAAACCAAGGTCTTTCTGAACCCAGAGCCCCGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CCA 72 bp AGAGACTGCAGGGTAATGGGGATGGAGCCGGGGCTCTaGGTTCAGAAAGACCTTGGTTTGAATCCTAGTTCT +
Preference number: 6 (lower is better)
Translates to: RDCRVMGMEPGL*VQKDLGLNPSS
Trigger: AGAACTAGGATTCAAACCAAGGTCTTTCTGAACCCAGAGCCCCGGCTCCATCCCCATTACCCTGCAGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CAA 72 bp TTTCCTAAGGCCACTGGAGGTGGGATCTCATCCTCATaGATCTTTCTGCCTCTCCTCACAGAGGCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: FPKATGGGISSS*IFLPLLTEASC
Trigger: GCAGCTAGCCTCTGTGAGGAGAGGCAGAAAGATCAATGAGGATGAGATCCCACCTCCAGTGGCCTTAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CAA 72 bp GGGGGAAATCCTGGAGGAACAGGCAATTCAGCAAAGTaGACTTTCCGTCCTGCTCGGTGTGCTCGAATAGCA +
Preference number: 6 (lower is better)
Translates to: GGNPGGTGNSAK*TFRPARCARIA
Trigger: TGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAGGATTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 72 bp TACCTTATTGGGCTTGTTAGTATGGACAACAGGGTCTaGGTTTACCCCTCACCTGCTATTCTCCCCACCAGC +
Preference number: 6 (lower is better)
Translates to: YLIGLVSMDNRV*VYPSPAILPTS
Trigger: GCTGGTGGGGAGAATAGCAGGTGAGGGGTAAACCCAGACCCTGTTGTCCATACTAACAAGCCCAATAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS GCA 72 bp CTGTGGAATCCATTGAGTTCATGGAAACAAGGAGGCTaGCTTCTCCTGGGTCCCTCTGTGAGATTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: LWNPLSSWKQGG*LLLGPSVRFLR
Trigger: TCTGAGAAATCTCACAGAGGGACCCAGGAGAAGGCAGCCTCCTTGTTTCCATGAACTCAATGGATTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS GCA 72 bp CAATTCAGCAAAGTTGACTTTCCGTCCTGCTCGGTGTaGTCGAATAGCATCTTGATATTGCTTGGCAATGCG +
Preference number: 6 (lower is better)
Translates to: QFSKVDFPSCSV*SNSILILLGNA
Trigger: CGCATTGCCAAGCAATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CCA 72 bp GTTAAGTGGCTTACCCAGTGCCTCATGGTTGTCAAGTaGTCAGGAGGAGTAAACAACAGGATAAGTGATCAC +
Preference number: 6 (lower is better)
Translates to: VKWLTQCLMVVK*SGGVNNRISDH
Trigger: GTGATCACTTATCCTGTTGTTTACTCCTCCTGACCACTTGACAACCATGAGGCACTGGGTAAGCCACTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470844.5
CDS GCA 72 bp AGGAACAGGCAATTCAGCAAAGTTGACTTTCCGTCCTaGTCGGTGTGCTCGAATAGCATCTTGATATTGCTT +
Preference number: 6 (lower is better)
Translates to: RNRQFSKVDFPS*SVCSNSILILL
Trigger: AAGCAATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284376.8
ENST00000371586.6
ENST00000438021.5
ENST00000450942.2
ENST00000460261.5
ENST00000491136.6
CDS CAA 72 bp TGTACAGTGGAGGAAAGAATATGTACCTTATTGGGCTaGTTAGTATGGACAACAGGGTCTGGGTTTACCCCT +
Preference number: 6 (lower is better)
Translates to: CTVEERICTLLG*LVWTTGSGFTP
Trigger: AGGGGTAAACCCAGACCCTGTTGTCCATACTAACAAGCCCAATAAGGTACATATTCTTTCCTCCACTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491136.6
CDS CAA 72 bp TTTCTCTGTACAGTGGAGGAAAGAATATGTACCTTATaGGGCTTGTTAGTATGGACAACAGGGTCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: FLCTVEERICTL*GLLVWTTGSGF
Trigger: AAACCCAGACCCTGTTGTCCATACTAACAAGCCCAATAAGGTACATATTCTTTCCTCCACTGTACAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491136.6