RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBY3 (Homo sapiens)

Ensembl gene IDs: ENSG00000204659

Ensembl transcript IDs: ENST00000376974.5, ENST00000639980.2

Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp ATGAGCACGCCCGCGCTGGCGCCTGCGCGCTTGCGCATCTTCCTCTaGCCGGCGCGCGCCGCAGCCGTCGGGATCACCTCGGGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: MSTPALAPARLRIFL*PARAAAVGITSGLR
Trigger: GCGCAACCCCGAGGTGATCCCGACGGCTGCGGCGCGCGCCGGGCAGAGGAAGATGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 90 bp CCCCAGGCGGTCCGCGAGAGCAGCGGCGACCGCGTCCTCGCCAGCTaGCTCTCAGTGGTCCACCGCCCGCCGCGGAACACGAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PQAVRESSGDRVLAS*LSVVHRPPRNTKAW
Trigger: CCAGGCCTTCGTGTTCCGCGGCGGGCGGTGGACCACTGAGAGCCAGCTGGCGAGGACGCGGTCGCCGCTGCTCTCGCGGACCGCCTGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp GTCCAGAGCGCACGGCTGGATCATGAGCACGCCCGCGCTGGCGCCTaGGCGCTTGCGCATCTTCCTCTGCCCGGCGCGCGCCGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: VQSARLDHEHARAGA*ALAHLPLPGARRSR
Trigger: ACGGCTGCGGCGCGCGCCGGGCAGAGGAAGATGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCAGCCGTGCGCTCTGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS TCA 90 bp TCTCAGTGGTCCACCGCCCGCCGCGGAACACGAAGGCCTGGTTGCTaGGGCGCATGCACGGCGCGCCGTAGGCGAGGCCCAGCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: SQWSTARRGTRRPGC*GACTARRRRGPARP
Trigger: AGGCCGAGCTGGGCCTCGCCTACGGCGCGCCGTGCATGCGCCTCAGCAACCAGGCCTTCGTGTTCCGCGGCGGGCGGTGGACCACTGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 90 bp GGCCCAGCTCGGCCTGGCGCGTGTTGTGGTCCAGCAGGTAGAAGGTaGACAGGGAGGGCATGCGGCGCAGTGGCGGCCGCCGTGGCGAGA +
Preference number: 5 (lower is better)
Translates to: GPARPGACCGPAGRR*TGRACGAVAAAVAR
Trigger: TCTCGCCACGGCGGCCGCCACTGCGCCGCATGCCCTCCCTGTCCACCTTCTACCTGCTGGACCACAACACGCGCCAGGCCGAGCTGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp TGCCCGGCGCGCGCCGCAGCCGTCGGGATCACCTCGGGGTTGCGCTaGTTCTCCAGCAAGTGCATGCGCGCCATGGTCTCAGTCAGCATG +
Preference number: 5 (lower is better)
Translates to: CPARAAAVGITSGLR*FSSKCMRAMVSVSM
Trigger: CATGCTGACTGAGACCATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCCGACGGCTGCGGCGCGCGCCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp TCCTCTGCCCGGCGCGCGCCGCAGCCGTCGGGATCACCTCGGGGTTaGGCTGCTTCTCCAGCAAGTGCATGCGCGCCATGGTCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: SSARRAPQPSGSPRG*AASPASACAPWSQS
Trigger: TGACTGAGACCATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCCGACGGCTGCGGCGCGCGCCGGGCAGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp AGCACTCGAAGGTTGCCAGGGCGTGGACCTTGTAGGGCACGCAGGTaGTCGAAGGGGAGCCTCGGGAGCGCTGGCGACTCGTGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: STRRLPGRGPCRARR*SKGSLGSAGDSCCA
Trigger: AGCGCAGCACGAGTCGCCAGCGCTCCCGAGGCTCCCCTTCGAGCACCTGCGTGCCCTACAAGGTCCACGCCCTGGCAACCTTCGAGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 90 bp GTAGAAGGTGGACAGGGAGGGCATGCGGCGCAGTGGCGGCCGCCGTaGCGAGAAGGGCCGCGAGATGTGATCGGCCCAAAACTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VEGGQGGHAAQWRPP*REGPRDVIGPKLLQ
Trigger: CTGCAGCAGTTTTGGGCCGATCACATCTCGCGGCCCTTCTCGCCACGGCGGCCGCCACTGCGCCGCATGCCCTCCCTGTCCACCTTCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 90 bp GTAGCGCGGCCTTTATTGCGTCACTGCGAGTCCAGAGCGCACGGCTaGATCATGAGCACGCCCGCGCTGGCGCCTGCGCGCTTGCGCATC +
Preference number: 5 (lower is better)
Translates to: VARPLLRHCESRAHG*IMSTPALAPARLRI
Trigger: GATGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCAGCCGTGCGCTCTGGACTCGCAGTGACGCAATAAAGGCCGCGCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp CGCAGGTGCTCGAAGGGGAGCCTCGGGAGCGCTGGCGACTCGTGCTaGGCTCTTGTCTCGGGAGCCCGGATGTCCAGAATGATGAAGGCG +
Preference number: 5 (lower is better)
Translates to: RRCSKGSLGSAGDSC*ALVSGARMSRMMKA
Trigger: CGCCTTCATCATTCTGGACATCCGGGCTCCCGAGACAAGAGCGCAGCACGAGTCGCCAGCGCTCCCGAGGCTCCCCTTCGAGCACCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp CTGCCACAGGCGGCTGGCATGGCTCGTAGCCGAGCACTCGAAGGTTaGCAGGGCGTGGACCTTGTAGGGCACGCAGGTGCTCGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: LPQAAGMARSRALEG*QGVDLVGHAGARRG
Trigger: TCCCCTTCGAGCACCTGCGTGCCCTACAAGGTCCACGCCCTGGCAACCTTCGAGTGCTCGGCTACGAGCCATGCCAGCCGCCTGTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS TCA 90 bp GGCCTTTATTGCGTCACTGCGAGTCCAGAGCGCACGGCTGGATCATaGGCACGCCCGCGCTGGCGCCTGCGCGCTTGCGCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GLYCVTASPERTAGS*ARPRWRLRACASSS
Trigger: AGAGGAAGATGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCAGCCGTGCGCTCTGGACTCGCAGTGACGCAATAAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp GCACGCAGGTGCTCGAAGGGGAGCCTCGGGAGCGCTGGCGACTCGTaGTGCGCTCTTGTCTCGGGAGCCCGGATGTCCAGAATGATGAAG +
Preference number: 5 (lower is better)
Translates to: ARRCSKGSLGSAGDS*CALVSGARMSRMMK
Trigger: CTTCATCATTCTGGACATCCGGGCTCCCGAGACAAGAGCGCAGCACGAGTCGCCAGCGCTCCCGAGGCTCCCCTTCGAGCACCTGCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 90 bp GCAGCCGTCGGGATCACCTCGGGGTTGCGCTGCTTCTCCAGCAAGTaGATGCGCGCCATGGTCTCAGTCAGCATGTCTATGAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: AAVGITSGLRCFSSK*MRAMVSVSMSMSSS
Trigger: GGAACTGCTCATAGACATGCTGACTGAGACCATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCCGACGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 90 bp CAGGGGGCGCTGCATCCCCAAGATCTGGTTCAGGGAGATGGTCTCTaGAAGCCCACATCCAGGCCCACCCTTGAGATTGTATCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: QGALHPQDLVQGDGL*KPTSRPTLEIVSSR
Trigger: CCGAGAAGATACAATCTCAAGGGTGGGCCTGGATGTGGGCTTCCAGAGACCATCTCCCTGAACCAGATCTTGGGGATGCAGCGCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS TCA 90 bp GGTTCAGGGAGATGGTCTCTGGAAGCCCACATCCAGGCCCACCCTTaGGATTGTATCTTCTCGGAGGATGTTTCCCCGTTAGTCCTCACT +
Preference number: 5 (lower is better)
Translates to: GSGRWSLEAHIQAHP*DCIFSEDVSPLVLT
Trigger: AGTGAGGACTAACGGGGAAACATCCTCCGAGAAGATACAATCTCAAGGGTGGGCCTGGATGTGGGCTTCCAGAGACCATCTCCCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp CCCGCGCTGGCGCCTGCGCGCTTGCGCATCTTCCTCTaGCCGGCGCGCGCCGCAGCCGTCGGGATCACCTCG +
Preference number: 6 (lower is better)
Translates to: PALAPARLRIFL*PARAAAVGITS
Trigger: CGAGGTGATCCCGACGGCTGCGGCGCGCGCCGGGCAGAGGAAGATGCGCAAGCGCGCAGGCGCCAGCGCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 90 bp GCGCACGGCTGGATCATGAGCACGCCCGCGCTGGCGCCTGCGCGCTaGCGCATCTTCCTCTGCCCGGCGCGCGCCGCAGCCGTCGGGATC +
Preference number: 6 (lower is better)
Translates to: AHGWIMSTPALAPAR*RIFLCPARAAAVGI
Trigger: GATCCCGACGGCTGCGGCGCGCGCCGGGCAGAGGAAGATGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCAGCCGTGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp GCACGGCTGGATCATGAGCACGCCCGCGCTGGCGCCTaGGCGCTTGCGCATCTTCCTCTGCCCGGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: ARLDHEHARAGA*ALAHLPLPGAR
Trigger: GCGCGCGCCGGGCAGAGGAAGATGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCAGCCGTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 72 bp GTCCGCGAGAGCAGCGGCGACCGCGTCCTCGCCAGCTaGCTCTCAGTGGTCCACCGCCCGCCGCGGAACACG +
Preference number: 6 (lower is better)
Translates to: VRESSGDRVLAS*LSVVHRPPRNT
Trigger: CGTGTTCCGCGGCGGGCGGTGGACCACTGAGAGCCAGCTGGCGAGGACGCGGTCGCCGCTGCTCTCGCGGAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 72 bp TGGATCATGAGCACGCCCGCGCTGGCGCCTGCGCGCTaGCGCATCTTCCTCTGCCCGGCGCGCGCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: WIMSTPALAPAR*RIFLCPARAAA
Trigger: GGCTGCGGCGCGCGCCGGGCAGAGGAAGATGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp CGGCGCGCGCCGCAGCCGTCGGGATCACCTCGGGGTTaGGCTGCTTCTCCAGCAAGTGCATGCGCGCCATGG +
Preference number: 6 (lower is better)
Translates to: RRAPQPSGSPRG*AASPASACAPW
Trigger: CCATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCCGACGGCTGCGGCGCGCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 72 bp GGCACGCAGGTGCTCGAAGGGGAGCCTCGGGAGCGCTaGCGACTCGTGCTGCGCTCTTGTCTCGGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: GTQVLEGEPRER*RLVLRSCLGSP
Trigger: CGGGCTCCCGAGACAAGAGCGCAGCACGAGTCGCCAGCGCTCCCGAGGCTCCCCTTCGAGCACCTGCGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 72 bp CCGGCGCGCGCCGCAGCCGTCGGGATCACCTCGGGGTaGCGCTGCTTCTCCAGCAAGTGCATGCGCGCCATG +
Preference number: 6 (lower is better)
Translates to: PARAAAVGITSG*RCFSSKCMRAM
Trigger: CATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCCGACGGCTGCGGCGCGCGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS TCA 72 bp TGCGTCACTGCGAGTCCAGAGCGCACGGCTGGATCATaGGCACGCCCGCGCTGGCGCCTGCGCGCTTGCGCA +
Preference number: 6 (lower is better)
Translates to: CVTASPERTAGS*ARPRWRLRACA
Trigger: TGCGCAAGCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCAGCCGTGCGCTCTGGACTCGCAGTGACGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 72 bp GGACAGGGAGGGCATGCGGCGCAGTGGCGGCCGCCGTaGCGAGAAGGGCCGCGAGATGTGATCGGCCCAAAA +
Preference number: 6 (lower is better)
Translates to: GQGGHAAQWRPP*REGPRDVIGPK
Trigger: TTTTGGGCCGATCACATCTCGCGGCCCTTCTCGCCACGGCGGCCGCCACTGCGCCGCATGCCCTCCCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 90 bp TTCCTCTGCCCGGCGCGCGCCGCAGCCGTCGGGATCACCTCGGGGTaGCGCTGCTTCTCCAGCAAGTGCATGCGCGCCATGGTCTCAGTC +
Preference number: 6 (lower is better)
Translates to: FLCPARAAAVGITSG*RCFSSKCMRAMVSV
Trigger: GACTGAGACCATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCCGACGGCTGCGGCGCGCGCCGGGCAGAGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp AGGTTGCCAGGGCGTGGACCTTGTAGGGCACGCAGGTaGTCGAAGGGGAGCCTCGGGAGCGCTGGCGACTCG +
Preference number: 6 (lower is better)
Translates to: RLPGRGPCRARR*SKGSLGSAGDS
Trigger: CGAGTCGCCAGCGCTCCCGAGGCTCCCCTTCGAGCACCTGCGTGCCCTACAAGGTCCACGCCCTGGCAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS TCA 72 bp AGTGGCGGCCGCCGTGGCGAGAAGGGCCGCGAGATGTaGTCGGCCCAAAACTGCTGCAGCGTCTGCCACAGG +
Preference number: 6 (lower is better)
Translates to: SGGRRGEKGREM*SAQNCCSVCHR
Trigger: CCTGTGGCAGACGCTGCAGCAGTTTTGGGCCGATCACATCTCGCGGCCCTTCTCGCCACGGCGGCCGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp TGCTCGAAGGGGAGCCTCGGGAGCGCTGGCGACTCGTaGTGCGCTCTTGTCTCGGGAGCCCGGATGTCCAGA +
Preference number: 6 (lower is better)
Translates to: CSKGSLGSAGDS*CALVSGARMSR
Trigger: TCTGGACATCCGGGCTCCCGAGACAAGAGCGCAGCACGAGTCGCCAGCGCTCCCGAGGCTCCCCTTCGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp CGCGCCGCAGCCGTCGGGATCACCTCGGGGTTGCGCTaGTTCTCCAGCAAGTGCATGCGCGCCATGGTCTCA +
Preference number: 6 (lower is better)
Translates to: RAAAVGITSGLR*FSSKCMRAMVS
Trigger: TGAGACCATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCCGACGGCTGCGGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 72 bp CCTTTATTGCGTCACTGCGAGTCCAGAGCGCACGGCTaGATCATGAGCACGCCCGCGCTGGCGCCTGCGCGC +
Preference number: 6 (lower is better)
Translates to: PLLRHCESRAHG*IMSTPALAPAR
Trigger: GCGCGCAGGCGCCAGCGCGGGCGTGCTCATGATCCAGCCGTGCGCTCTGGACTCGCAGTGACGCAATAAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp TCGAAGGGGAGCCTCGGGAGCGCTGGCGACTCGTGCTaGGCTCTTGTCTCGGGAGCCCGGATGTCCAGAATG +
Preference number: 6 (lower is better)
Translates to: SKGSLGSAGDSC*ALVSGARMSRM
Trigger: CATTCTGGACATCCGGGCTCCCGAGACAAGAGCGCAGCACGAGTCGCCAGCGCTCCCGAGGCTCCCCTTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp GCGGCTGGCATGGCTCGTAGCCGAGCACTCGAAGGTTaGCAGGGCGTGGACCTTGTAGGGCACGCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: AAGMARSRALEG*QGVDLVGHAGA
Trigger: AGCACCTGCGTGCCCTACAAGGTCCACGCCCTGGCAACCTTCGAGTGCTCGGCTACGAGCCATGCCAGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp TCCTCCAGCAACACTTGGCTTTTGGACCGCTGCACCTaGGCCTTCCAGCCCCAGGCGGTCCGCGAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSSNTWLLDRCT*AFQPQAVRESS
Trigger: GCTGCTCTCGCGGACCGCCTGGGGCTGGAAGGCGCAGGTGCAGCGGTCCAAAAGCCAAGTGTTGCTGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS GCA 72 bp GGGATCACCTCGGGGTTGCGCTGCTTCTCCAGCAAGTaGATGCGCGCCATGGTCTCAGTCAGCATGTCTATG +
Preference number: 6 (lower is better)
Translates to: GITSGLRCFSSK*MRAMVSVSMSM
Trigger: CATAGACATGCTGACTGAGACCATGGCGCGCATGCACTTGCTGGAGAAGCAGCGCAACCCCGAGGTGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 72 bp CTGCAGCTTCAGGTAGTTGTTCTCCTCCAGCAACACTaGGCTTTTGGACCGCTGCACCTGCGCCTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: LQLQVVVLLQQH*AFGPLHLRLPA
Trigger: GGCTGGAAGGCGCAGGTGCAGCGGTCCAAAAGCCAAGTGTTGCTGGAGGAGAACAACTACCTGAAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CCA 72 bp CTGCATCCCCAAGATCTGGTTCAGGGAGATGGTCTCTaGAAGCCCACATCCAGGCCCACCCTTGAGATTGTA +
Preference number: 6 (lower is better)
Translates to: LHPQDLVQGDGL*KPTSRPTLEIV
Trigger: TACAATCTCAAGGGTGGGCCTGGATGTGGGCTTCCAGAGACCATCTCCCTGAACCAGATCTTGGGGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 90 bp TGGTTCAGGGAGATGGTCTCTGGAAGCCCACATCCAGGCCCACCCTaGAGATTGTATCTTCTCGGAGGATGTTTCCCCGTTAGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: WFREMVSGSPHPGPP*RLYLLGGCFPVSPH
Trigger: GTGAGGACTAACGGGGAAACATCCTCCGAGAAGATACAATCTCAAGGGTGGGCCTGGATGTGGGCTTCCAGAGACCATCTCCCTGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 72 bp GTCTCTGGAAGCCCACATCCAGGCCCACCCTTGAGATaGTATCTTCTCGGAGGATGTTTCCCCGTTAGTCCT +
Preference number: 6 (lower is better)
Translates to: VSGSPHPGPPLR*YLLGGCFPVSP
Trigger: AGGACTAACGGGGAAACATCCTCCGAGAAGATACAATCTCAAGGGTGGGCCTGGATGTGGGCTTCCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 72 bp GAGATGGTCTCTGGAAGCCCACATCCAGGCCCACCCTaGAGATTGTATCTTCTCGGAGGATGTTTCCCCGTT +
Preference number: 6 (lower is better)
Translates to: EMVSGSPHPGPP*RLYLLGGCFPV
Trigger: AACGGGGAAACATCCTCCGAGAAGATACAATCTCAAGGGTGGGCCTGGATGTGGGCTTCCAGAGACCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2
CDS CAA 90 bp AGGGAGATGGTCTCTGGAAGCCCACATCCAGGCCCACCCTTGAGATaGTATCTTCTCGGAGGATGTTTCCCCGTTAGTCCTCACTGTATG +
Preference number: 6 (lower is better)
Translates to: REMVSGSPHPGPPLR*YLLGGCFPVSPHCM
Trigger: CATACAGTGAGGACTAACGGGGAAACATCCTCCGAGAAGATACAATCTCAAGGGTGGGCCTGGATGTGGGCTTCCAGAGACCATCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376974.5
ENST00000639980.2