RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBX7 (Homo sapiens)

Ensembl gene IDs: ENSG00000100307

Ensembl transcript IDs: ENST00000216133.10, ENST00000401405.7, ENST00000434260.1, ENST00000477827.1, ENST00000482294.1, ENST00000490741.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGCAGCCTGGCCCGGTGCAGCCGAGAAACCACATCTGTATGCCTaGAGCATGGGGTGCCATCGCACCTGTGCCAGACCCCTGCCCTCC +
Preference number: 1 (lower is better)
Translates to: PAAWPGAAEKPHLYA*SMGCHRTCARPLPS
Trigger: GGAGGGCAGGGGTCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp CACACCCGCAGCCTGGCCCGGTGCAGCCGAGAAACCACATCTGTATaGCTGGAGCATGGGGTGCCATCGCACCTGTGCCAGACCCCTGCC +
Preference number: 1 (lower is better)
Translates to: HTRSLARCSRETTSV*LEHGVPSHLCQTPA
Trigger: GGCAGGGGTCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCGGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp GTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTaGCTGCCCACACCTGGGTTGGCTGAGTTGGAGGGGAGGGCAGAA +
Preference number: 1 (lower is better)
Translates to: VKGCPENVVGHSLPP*LPTPGLAELEGRAE
Trigger: TTCTGCCCTCCCCTCCAACTCAGCCAACCCAGGTGTGGGCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp CCCGGTGCAGCCGAGAAACCACATCTGTATGCCTGGAGCATGGGGTaGCATCGCACCTGTGCCAGACCCCTGCCCTCCACTGAAAGCCGC +
Preference number: 1 (lower is better)
Translates to: PGAAEKPHLYAWSMG*HRTCARPLPSTESR
Trigger: GCGGCTTTCAGTGGAGGGCAGGGGTCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp TTAAGAGGGCTGCGGGGGTGGAGGTCACTGTCTGCCTTGCTCTACTaGGCCACTCTGGGCTGGAAGGAGGCCTGCACGGCCACAGCCGTA +
Preference number: 1 (lower is better)
Translates to: LRGLRGWRSLSALLY*ATLGWKEACTATAV
Trigger: TACGGCTGTGGCCGTGCAGGCCTCCTTCCAGCCCAGAGTGGCCCAGTAGAGCAAGGCAGACAGTGACCTCCACCCCCGCAGCCCTCTTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp CAGGCCCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTaGGCCACGGAGTTCCCCATGGGCCATAAAGGGCTGAGTAAGAGG +
Preference number: 1 (lower is better)
Translates to: QAHPSQVTPLEFSSP*ATEFPMGHKGLSKR
Trigger: CCTCTTACTCAGCCCTTTATGGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp CCTGGCCCGGTGCAGCCGAGAAACCACATCTGTATGCCTGGAGCATaGGGTGCCATCGCACCTGTGCCAGACCCCTGCCCTCCACTGAAA +
Preference number: 1 (lower is better)
Translates to: PGPVQPRNHICMPGA*GAIAPVPDPCPPLK
Trigger: TTTCAGTGGAGGGCAGGGGTCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCACCGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp GGGTGGAGGTCACTGTCTGCCTTGCTCTACTGGGCCACTCTGGGCTaGAAGGAGGCCTGCACGGCCACAGCCGTAGGTGACCTCATAGAG +
Preference number: 1 (lower is better)
Translates to: GWRSLSALLYWATLG*KEACTATAVGDLIE
Trigger: CTCTATGAGGTCACCTACGGCTGTGGCCGTGCAGGCCTCCTTCCAGCCCAGAGTGGCCCAGTAGAGCAAGGCAGACAGTGACCTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp ATCACACAACTTAGCAGACGCCTGCACACCCGCAGCCTGGCCCGGTaGAGCCGAGAAACCACATCTGTATGCCTGGAGCATGGGGTGCCA +
Preference number: 1 (lower is better)
Translates to: ITQLSRRLHTRSLAR*SRETTSVCLEHGVP
Trigger: TGGCACCCCATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCGGGTGTGCAGGCGTCTGCTAAGTTGTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp GCCAGGGTTTCTAACCCAGGTTCGCAAGGCCCATGTGGACACGTCTaGAGCCACACATGCTTTCACGGGGCACATGGGAACGTACACGCG +
Preference number: 1 (lower is better)
Translates to: ARVSNPGSQGPCGHV*SHTCFHGAHGNVHA
Trigger: CGCGTGTACGTTCCCATGTGCCCCGTGAAAGCATGTGTGGCTGCAGACGTGTCCACATGGGCCTTGCGAACCTGGGTTAGAAACCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp CAGAAGCACAGCGCCTGCCCCCAGAACAAGGGGACAGGAGGAGCTTaGCAACGAGGTCATCACCCGAACAGCAGTGACAGTCCTGCATTC +
Preference number: 1 (lower is better)
Translates to: QKHSACPQNKGTGGA*QRGHHPNSSDSPAF
Trigger: GAATGCAGGACTGTCACTGCTGTTCGGGTGATGACCTCGTTGCCAAGCTCCTCCTGTCCCCTTGTTCTGGGGGCAGGCGCTGTGCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp CCTCACGGGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTaGTACATCACACAACTTAGCAGACGCCTGCACACCCGCAGCCTG +
Preference number: 1 (lower is better)
Translates to: PHGRKDRVQTSQSLC*YITQLSRRLHTRSL
Trigger: CAGGCTGCGGGTGTGCAGGCGTCTGCTAAGTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCCCGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp TGCTTTCACGGGGCACATGGGAACGTACACGCGAAGGGTAATGCGTaGACACCTGTGCAGCCAGGTGTGCATGAGCGTTTCTGCACAGGC +
Preference number: 1 (lower is better)
Translates to: CFHGAHGNVHAKGNA*TPVQPGVHERFCTG
Trigger: GCCTGTGCAGAAACGCTCATGCACACCTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCCCGTGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp AACCCAGGTTCGCAAGGCCCATGTGGACACGTCTGCAGCCACACATaGTTTCACGGGGCACATGGGAACGTACACGCGAAGGGTAATGCG +
Preference number: 1 (lower is better)
Translates to: NPGSQGPCGHVCSHT*FHGAHGNVHAKGNA
Trigger: CGCATTACCCTTCGCGTGTACGTTCCCATGTGCCCCGTGAAAGCATGTGTGGCTGCAGACGTGTCCACATGGGCCTTGCGAACCTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp CGTCTCAAAGCCTGTGCTGATACATCACACAACTTAGCAGACGCCTaGACACCCGCAGCCTGGCCCGGTGCAGCCGAGAAACCACATCTG +
Preference number: 1 (lower is better)
Translates to: RLKACADTSHNLADA*TPAAWPGAAEKPHL
Trigger: CAGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCGGGTGTGCAGGCGTCTGCTAAGTTGTGTGATGTATCAGCACAGGCTTTGAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp GCTGATACATCACACAACTTAGCAGACGCCTGCACACCCGCAGCCTaGCCCGGTGCAGCCGAGAAACCACATCTGTATGCCTGGAGCATG +
Preference number: 1 (lower is better)
Translates to: ADTSHNLADACTPAA*PGAAEKPHLYAWSM
Trigger: CATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCGGGTGTGCAGGCGTCTGCTAAGTTGTGTGATGTATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp GGAAAGAATCACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTaGGGACACAGAGCAGAGCTGCGAGGAGGGCGGGCAGGTCTCAAA +
Preference number: 1 (lower is better)
Translates to: GKNHPLLASVDSVTS*GHRAELRGGRAGLK
Trigger: TTTGAGACCTGCCCGCCCTCCTCGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTGATTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp CTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCAGCTaGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACAG +
Preference number: 1 (lower is better)
Translates to: LCKGSALVLRPGGRS*PLRKQKLNHLTEAQ
Trigger: CTGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp TCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCATAAAGGGCTaGGTAAGAGGAAAGATGTGTCCTGCTGCTGCAGACAAAAGCAAC +
Preference number: 1 (lower is better)
Translates to: SALPEPRSSPWAIKG*VRGKMCPAAADKSN
Trigger: GTTGCTTTTGTCTGCAGCAGCAGGACACATCTTTCCTCTTACTCAGCCCTTTATGGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp ATCCACTCTGACTCTCCCAGCACACACACACTCAGCAAAGGCATGTaGTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCA +
Preference number: 1 (lower is better)
Translates to: IHSDSPSTHTLSKGM*LESTRAPDPSQIHS
Trigger: TGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGAGTCAGAGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp GAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTaGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCAC +
Preference number: 1 (lower is better)
Translates to: EAHSVQRKRSCAETW*PQLATSKAKAKPPH
Trigger: GTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp CTCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTaGTGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCT +
Preference number: 1 (lower is better)
Translates to: LEAHSVQRKRSCAET*WPQLATSKAKAKPP
Trigger: AGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp TCAGGTCATCCCGGAGGGGACTGTCCCCCAATGGAAGCACTGAATTaGCCGTGGACAACTAAAGATCGAGGAGGAAGGAAAGAGAGACTC +
Preference number: 1 (lower is better)
Translates to: SGHPGGDCPPMEALN*PWTTKDRGGRKERL
Trigger: GAGTCTCTCTTTCCTTCCTCCTCGATCTTTAGTTGTCCACGGTCAATTCAGTGCTTCCATTGGGGGACAGTCCCCTCCGGGATGACCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp GTGAATCAGGTCATCCCGGAGGGGACTGTCCCCCAATGGAAGCACTaGATTGACCGTGGACAACTAAAGATCGAGGAGGAAGGAAAGAGA +
Preference number: 1 (lower is better)
Translates to: VNQVIPEGTVPQWKH*IDRGQLKIEEEGKR
Trigger: TCTCTTTCCTTCCTCCTCGATCTTTAGTTGTCCACGGTCAATTCAGTGCTTCCATTGGGGGACAGTCCCCTCCGGGATGACCTGATTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 90 bp ATGGGCCATAAAGGGCTGAGTAAGAGGAAAGATGTGTCCTGCTGCTaGAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAA +
Preference number: 1 (lower is better)
Translates to: MGHKGLSKRKDVSCC*RQKQLQHPHRKPRE
Trigger: TTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGGACACATCTTTCCTCTTACTCAGCCCTTTATGGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 90 bp ACTCTGACTCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTaGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTA +
Preference number: 1 (lower is better)
Translates to: TLTLPAHTHSAKACA*NQLVPPTPPRYIHL
Trigger: TAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGAGTCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp CTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTaGATCCACAGACCCACAGATTGCGCAAATAGTTCTTTGAAAGTG +
Preference number: 1 (lower is better)
Translates to: LLQTKATAAPTQKAP*IHRPTDCANSSLKV
Trigger: CACTTTCAAAGAACTATTTGCGCAATCTGTGGGTCTGTGGATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 90 bp AATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCTaGACAAAGCTCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGT +
Preference number: 1 (lower is better)
Translates to: NQLVPPTPPRYIHLV*TKLEAHSVQRKRSC
Trigger: ACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGGTGCCATCGCACCTGTaGCAGACCCCTGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: LREARQRSLHRNTAQPQLVPSHL*QTPALH
Trigger: GTGGAGGGCAGGGGTCTGGCACAGGTGCGATGGCAC...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCACCAGCCAACCAGGCTaGGGTGGCCACTCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: RSHPWSSALPEPRSSPWATSQPG*GGHSRE
Trigger: CTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGT...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCCTGGCTGCCCTGAGCTaGGCACCTCAGGCCCACCCG +
Preference number: 2 (lower is better)
Translates to: SKLILCKGSALVLRPGGRLAALS*APQAHP
Trigger: CGGGTGGGCCTGAGGTGCCCAGCTCAGGGCAGCCAG...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTGCGAAGGGTAATGCGTaGACACCTGTGCAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVAKGNA*TPVQPG
Trigger: ACCTGGCTGCACAGGTGTGCACGCATTACCCTTCGC...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTGTCTGCAGCCACACATaGTTTCACGGGGCACATGGG +
Preference number: 2 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVVCSHT*FHGAHG
Trigger: CCCATGTGCCCCGTGAAAGCATGTGTGGCTGCAGAC...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCCTCCACAGCTGGAGATaGGTGGTGATTCCTGCCGCT +
Preference number: 2 (lower is better)
Translates to: RSHPWSSALPEPRSSPWALHSWR*VVIPAA
Trigger: AGCGGCAGGAATCACCACCCATCTCCAGCTGTGGAG...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCATCTTTACCTCCGCTaGGCACCCCTCTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVHLYLR*APLSWK
Trigger: CTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATG...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCGACTCTGTGACTTCCTaGGGACACAGAGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: RSHPWSSALPEPRSSPWADSVTS*GHRAEL
Trigger: CAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTC...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTTTAGGAGTCAAGGGCTaGCCTGAGAACGTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVLGVKG*PENVVG
Trigger: TCCCACCACGTTCTCAGGGCAGCCCTTGACTCCTAA...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCGAAGTCACTCCTCACTaGCAGGGAAGCCACGGGCCC +
Preference number: 2 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLEVTPH*QGSHGP
Trigger: GGGCCCGTGGCTTCCCTGCCAGTGAGGAGTGACTTC...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCGGTGTCCCGGGCAGGTaGTCCTGTCCCCATCCTGCC +
Preference number: 2 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAGVPGR*SCPHPA
Trigger: GGCAGGATGGGGACAGGATCACCTGCCCGGGACACC...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp GCGAGGAGGGCGGGCAGGTCTCAAACTTGCTGGCCGCACTCCACTCTTGGTGTGAGGTCTTTTGTGCTGTaGATCACCCCACGTTCGCCT +
Preference number: 2 (lower is better)
Translates to: ARRAGRSQTCWPHSTLGVRSFVL*ITPRSP
Trigger: AGGCGAACGTGGGGTGATTCACAGCACAAAAGACCT...CACACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCCGCCCTCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGGCTGGAGATGGGTGGTaGTTCCTGCCGCTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQAGDGW*FLPLLV
Trigger: GACAAGGAGCGGCAGGAATCACCACCCATCTCCAGC...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp GCTGGCCGCACTCCACTCTTGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAACGCAGCCTGGCCCGGTaGAGCCGAGAAACCACATCT +
Preference number: 2 (lower is better)
Translates to: AGRTPLLVCVTLTLTAKERSLAR*SRETTS
Trigger: AGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCG...TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCGCCCTGAGAACGTGGTaGGACACTCCCTCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: SKLILCKGSALVLRPGGRALRTW*DTPSLP
Trigger: AGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGC...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACATGGGCCACTCTGGGCTaGAAGGAGGCCTGCACGGCC +
Preference number: 2 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTWATLG*KEACTA
Trigger: GGCCGTGCAGGCCTCCTTCCAGCCCAGAGTGGCCCA...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCCAACAGAGCACCCCATaGAGAAAGGGCTGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLQQSTP*RKGCRL
Trigger: CAGCCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTG...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCCAGAGAAAGGGCAGGTaGTGGGAGAGTAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFQRKGR*WESSGI
Trigger: GATCCCACTACTCTCCCACCACCTGCCCTTTCTCTG...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGCTTTCACGGGGCACATaGGAACGTACACGCGAAGGG +
Preference number: 2 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQLSRGT*ERTREG
Trigger: CCCTTCGCGTGTACGTTCCCATGTGCCCCGTGAAAG...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGTTGCCAGGGGTGGGCTaGGGCAAAGCCTGCCCATCA +
Preference number: 2 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAALPGVG*GKACPS
Trigger: TGATGGGCAGGCTTTGCCCCAGCCCACCCCTGGCAA...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGTCTGCCTTGCTCTACTaGGCCACTCTGGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQSALLY*ATLGWK
Trigger: CTTCCAGCCCAGAGTGGCCCAGTAGAGCAAGGCAGA...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCGTGCATGAGCGTTTCTaGACAGGCCAGGTGATGAGG +
Preference number: 2 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLVHERF*TGQVMR
Trigger: CCTCATCACCTGGCCTGTGCAGAAACGCTCATGCAC...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACGCCTGGAGCATGGGGTaGCATCGCACCTGTGCCAGA +
Preference number: 2 (lower is better)
Translates to: GGRTGSRRLKACADTSHNAWSMG*HRTCAR
Trigger: TCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGC...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACACATGAGCCACCTGGCTaGCCTGAGCTGGGCACCTCA +
Preference number: 2 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTHEPPG*PELGTS
Trigger: TGAGGTGCCCAGCTCAGGGCAGCCAGGTGGCTCATG...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGTCAAGGGAGAGGGTTTaGGCCTTCCAATGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: LREARQRSLHRNTAQPQLSRERV*AFQCSF
Trigger: AAAGGAGCATTGGAAGGCCCAAACCCTCTCCCTTGA...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCAACCAGGCTGGGGTaGCCACTCAAGGGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAPTRLG*PLKGEG
Trigger: ACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGG...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACATGCCCACACCTGGGTTaGCTGAGTTGGAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTCPHLG*LSWRGG
Trigger: CCCTCCCCTCCAACTCAGCCAACCCAGGTGTGGGCA...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCGCAGCCAGGTGTGCATaGGCGTTTCTGCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAAARCA*AFLHRP
Trigger: TGGCCTGTGCAGAAACGCTCATGCACACCTGGCTGC...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGGTGCAGGTGTGGTGGTaGGGTCTTTTGTGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRVQVWW*GLLCCE
Trigger: TTCACAGCACAAAAGACCTCACCACCACACCTGCAC...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp AGGGCTGAAAAGTCACCTGAGTCAGAAAGAACAAGAACCCCTCACGGGAGGAAGAACTTAGCAGACGCCTaGACACCCGCAGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: RAEKSPESERTRTPHGRKNLADA*TPAAWP
Trigger: GGGCCAGGCTGCGGGTGTGCAGGCGTCTGCTAAGTT...CTTCCTCCCGTGAGGGGTTCTTGTTCTTTCTGACTCAGGTGACTTTTCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATGCTCAGCCCCAGCTGTaGCATTTAGGTTGGATGGGG +
Preference number: 2 (lower is better)
Translates to: PAAADKSNCSTHTESPVNAQPQL*HLGWMG
Trigger: CCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGC...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGAGGTCTCAAACTTGCTaGCCGCACTCCACTCTTGGT +
Preference number: 2 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQRSQTC*PHSTLG
Trigger: ACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCT...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGTCTCAAAGCCTGTGCTaGTACATCACACAACTTAGC +
Preference number: 2 (lower is better)
Translates to: LREARQRSLHRNTAQPQLSQSLC*YITQLS
Trigger: GCTAAGTTGTGTGATGTATCAGCACAGGCTTTGAGA...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCGAGTTCAGCTCTCCCTaGGCCACGGAGTTCCCCATG +
Preference number: 2 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVEFSSP*ATEFPM
Trigger: CATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTC...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCAAACCAGAAAACAAGTaGACCTTGCCAGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SKLILCKGSALVLRPGGRKPENK*TLPGVG
Trigger: GCCCACCCCTGGCAAGGTGCACTTGTTTTCTGGTTT...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCGTGGAGGTCACTGTCTaGCTTGCTCTACTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAVEVTV*LALLGH
Trigger: GTGGCCCAGTAGAGCAAGGCAGACAGTGACCTCCAC...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACACCACATCTGTATGCCTaGAGCATGGGGTGCCATCGC +
Preference number: 2 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTPHLYA*SMGCHR
Trigger: GCGATGGCACCCCATGCTCCAGGCATACAGATGTGG...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCAGAGACTCAGGGATCTaGGAAGCCTGTCAACAGAGC +
Preference number: 2 (lower is better)
Translates to: SKLILCKGSALVLRPGGRRDSGI*EACQQS
Trigger: GCTCTGTTGACAGGCTTCCCAGATCCCTGAGTCTCT...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATACTCCCAGAACCAGCTaGTGCGTCACTAGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PAAADKSNCSTHTESPVNTPRTS*CVTRGE
Trigger: TTCTCCTCTAGTGACGCAGCAGCTGGTTCTGGGAGT...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACACTGTGCAGCCAGGTGTaGATGAGCGTTTCTGCACAG +
Preference number: 2 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTLCSQV*MSVSAQ
Trigger: CTGTGCAGAAACGCTCATGCACACCTGGCTGCACAG...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGAAGCAGGTAGCAAGGTaGATGCAAGGTGGGGTGAGT +
Preference number: 2 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAAKQVAR*MQGGVS
Trigger: ACTCACCCCACCTTGCATGCACCTTGCTACCTGCTT...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCACAGACCCACAGATTaGGCAAATAGTTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVHRPTD*ANSSLK
Trigger: TTTCAAAGAACTATTTGCGCAATCTGTGGGTCTGTG...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACAAAGGTGCATGCAAGGTaGGGTGAGTGCAGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTKVHAR*GECRCG
Trigger: ACCACACCTGCACTCACCCCACCTTGCATGCACCTT...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACCCATGTGGACACGTCTaGAGCCACACATGCTTTCAC +
Preference number: 2 (lower is better)
Translates to: GGRTGSRRLKACADTSHNPCGHV*SHTCFH
Trigger: GTGAAAGCATGTGTGGCTGCAGACGTGTCCACATGG...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCATGCAGAAAGGGCTaGAGGCTGTCTTTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAPCRKG*RLSLVW
Trigger: CCAAACCAAAGACAGCCTGCAGCCCTTTCTGCATGG...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TCACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGATCTCCCCTACAGGACTaGAAGAGAGGGAGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: SPSPCLSRLCDFLRTQSRSPLQD*KRGRSH
Trigger: GTGACTTCTCCCTCTCTTCCAGTCCTGTAGGGGAGA...TCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCGAATCACCCTCTCCTTaGCTCAGTAGACTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAESPSP*LSRLCD
Trigger: GTCACAGAGTCTACTGAGGCAAGGAGAGGGTGATTC...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR TCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCTGGGCCATAAAGGGCTaGGTAAGAGGAAAGATGTGT +
Preference number: 2 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAWAIKG*VRGKMC
Trigger: ACACATCTTTCCTCTTACTCAGCCCTTTATGGCCCA...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCAGGCTGTCTTTGGTTTaGGAACCAGGGAAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVRLSLV*EPGKKG
Trigger: TCCCTTCTTCCCTGGTTCCCAAACCAAAGACAGCCT...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCTCGAAGCTCATTCTGTaGAAAGGAAGCGCTCTTGTG +
Preference number: 2 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVSKLIL*KGSALV
Trigger: CACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAAATGGGTGGTGATTCCTaGCGCTCCTTGTCCAGACCC +
Preference number: 2 (lower is better)
Translates to: QIHSFSLNKARSSFCAKEMGGDS*RSLSRP
Trigger: GGGTCTGGACAAGGAGCGGCAGGAATCACCACCCAT...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CCA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAAACAGGGCTCCACAGCTaGAGATGGGTGGTGATTCCT +
Preference number: 2 (lower is better)
Translates to: QIHSFSLNKARSSFCAKETGLHS*RWVVIP
Trigger: AGGAATCACCACCCATCTCCAGCTGTGGAGCCCTGT...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR GCA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAAGTTTGGGCCTTCCAATaGTCCTTTAACTCCCAGAAC +
Preference number: 2 (lower is better)
Translates to: QIHSFSLNKARSSFCAKEVWAFQ*SFNSQN
Trigger: GTTCTGGGAGTTAAAGGAGCATTGGAAGGCCCAAAC...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp GGGCACCTCAGGCCCACCCGTCCCAGGTCACACCCCTaGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: GHLRPTRPRSHP*SSALPEPRSSP
Trigger: TGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGGGCCTGAGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp TGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTaGCTGCCCACACCTGGGTTGGCTGAGTTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: CPENVVGHSLPP*LPTPGLAELEG
Trigger: CCCCTCCAACTCAGCCAACCCAGGTGTGGGCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp TCCCCTCCACAGGGCTCCACAGCTGGAGATGGGTGGTaGTTCCTGCCGCTCCTTGTCCAGACCCACCCCACG +
Preference number: 3 (lower is better)
Translates to: SPPQGSTAGDGW*FLPLLVQTHPT
Trigger: CGTGGGGTGGGTCTGGACAAGGAGCGGCAGGAATCACCACCCATCTCCAGCTGTGGAGCCCTGTGGAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp CCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTaGGCCACGGAGTTCCCCATGGGCCATAAAGGGCTG +
Preference number: 3 (lower is better)
Translates to: PSQVTPLEFSSP*ATEFPMGHKGL
Trigger: CAGCCCTTTATGGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp GTGCCATCGCACCTGTGCCAGACCCCTGCCCTCCACTaGAAGCCGCAAGCAGGTAGCAAGGTGCATGCAAGG +
Preference number: 3 (lower is better)
Translates to: VPSHLCQTPALH*KPQAGSKVHAR
Trigger: CCTTGCATGCACCTTGCTACCTGCTTGCGGCTTTCAGTGGAGGGCAGGGGTCTGGCACAGGTGCGATGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp GCCGAGAAACCACATCTGTATGCCTGGAGCATGGGGTaGCATCGCACCTGTGCCAGACCCCTGCCCTCCACT +
Preference number: 3 (lower is better)
Translates to: AEKPHLYAWSMG*HRTCARPLPST
Trigger: AGTGGAGGGCAGGGGTCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGCATACAGATGTGGTTTCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp CTTAGCAGACGCCTGCACACCCGCAGCCTGGCCCGGTaGAGCCGAGAAACCACATCTGTATGCCTGGAGCAT +
Preference number: 3 (lower is better)
Translates to: LSRRLHTRSLAR*SRETTSVCLEH
Trigger: ATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCGGGTGTGCAGGCGTCTGCTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp GTGCAGCCGAGAAACCACATCTGTATGCCTGGAGCATaGGGTGCCATCGCACCTGTGCCAGACCCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: VQPRNHICMPGA*GAIAPVPDPCP
Trigger: AGGGCAGGGGTCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGCATACAGATGTGGTTTCTCGGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp CACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTaGGGACACAGAGCAGAGCTGCGAGGAGGGCGGGCA +
Preference number: 3 (lower is better)
Translates to: HPLLASVDSVTS*GHRAELRGGRA
Trigger: TGCCCGCCCTCCTCGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp AGCAGAGCTGCGAGGAGGGCGGGCAGGTCTCAAACTTaGTGGCCGCACTCCACTCTTGGTGTGTGTTACCCT +
Preference number: 3 (lower is better)
Translates to: SRAARRAGRSQT*WPHSTLGVCYP
Trigger: AGGGTAACACACACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCCGCCCTCCTCGCAGCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp AGAGCTGCGAGGAGGGCGGGCAGGTCTCAAACTTGCTaGCCGCACTCCACTCTTGGTGTGTGTTACCCTGAC +
Preference number: 3 (lower is better)
Translates to: RAARRAGRSQTC*PHSTLGVCYPD
Trigger: GTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCCGCCCTCCTCGCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp AGCGCCTGCCCCCAGAACAAGGGGACAGGAGGAGCTTaGCAACGAGGTCATCACCCGAACAGCAGTGACAGT +
Preference number: 3 (lower is better)
Translates to: SACPQNKGTGGA*QRGHHPNSSDS
Trigger: ACTGTCACTGCTGTTCGGGTGATGACCTCGTTGCCAAGCTCCTCCTGTCCCCTTGTTCTGGGGGCAGGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp GGGGCACATGGGAACGTACACGCGAAGGGTAATGCGTaGACACCTGTGCAGCCAGGTGTGCATGAGCGTTTC +
Preference number: 3 (lower is better)
Translates to: GAHGNVHAKGNA*TPVQPGVHERF
Trigger: GAAACGCTCATGCACACCTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp TCGCAAGGCCCATGTGGACACGTCTGCAGCCACACATaGTTTCACGGGGCACATGGGAACGTACACGCGAAG +
Preference number: 3 (lower is better)
Translates to: SQGPCGHVCSHT*FHGAHGNVHAK
Trigger: CTTCGCGTGTACGTTCCCATGTGCCCCGTGAAAGCATGTGTGGCTGCAGACGTGTCCACATGGGCCTTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp GACTCTCCCAGCACACACACACTCAGCAAAGGCATGTaGTTGGAATCAACTCGTGCCCCCGACCCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: DSPSTHTLSKGM*LESTRAPDPSQ
Trigger: CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGCAGGCTGTCTTTGGTTaGGGAACCAGGGAAGAAGGG +
Preference number: 3 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQQAVFG*GTREEG
Trigger: CCCTTCTTCCCTGGTTCCCAAACCAAAGACAGCCTG...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACAGGGGACAGGAGGAGCTaGGCAACGAGGTCATCACCC +
Preference number: 3 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTGDRRS*ATRSSP
Trigger: GGGTGATGACCTCGTTGCCAAGCTCCTCCTGTCCCC...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp GGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCCAATaGTCCTTTAACTCCCAGAACCAGCTGCTGCGTCAC +
Preference number: 3 (lower is better)
Translates to: GGHSRERVWAFQ*SFNSQNQLLRH
Trigger: GTGACGCAGCAGCTGGTTCTGGGAGTTAAAGGAGCATTGGAAGGCCCAAACCCTCTCCCTTGAGTGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp TCTAACCCAGGTTCGCAAGGCCCATGTGGACACGTCTaGAGCCACACATGCTTTCACGGGGCACATGGGAAC +
Preference number: 3 (lower is better)
Translates to: SNPGSQGPCGHV*SHTCFHGAHGN
Trigger: GTTCCCATGTGCCCCGTGAAAGCATGTGTGGCTGCAGACGTGTCCACATGGGCCTTGCGAACCTGGGTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp CTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTaGAATCAACTCGTGCCCCCGACCCCTCCCAGATAC +
Preference number: 3 (lower is better)
Translates to: LPAHTHSAKACA*NQLVPPTPPRY
Trigger: GTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCGGCCCCCAGGACACCTaGTACAAACCAGAAAACAAG +
Preference number: 3 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLGPQDT*YKPENK
Trigger: CTTGTTTTCTGGTTTGTACAAGGTGTCCTGGGGGCC...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGGGCCGCACTCCACTCTaGGTGTGTGTTACCCTGACT +
Preference number: 3 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAAGRTPL*VCVTLT
Trigger: AGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCC...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp TCACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGGGCAGGTCTCAAACTaGCTGGCCGCACTCCACTCT +
Preference number: 3 (lower is better)
Translates to: SPSPCLSRLCDFLRTQSRGQVSN*LAALHS
Trigger: AGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCC...TCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCTGCGCAAATAGTTCTTaGAAAGTGACCAGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: RSHPWSSALPEPRSSPWACANSS*KVTRKQ
Trigger: CTGCTTCCTGGTCACTTTCAAAGAACTATTTGCGCA...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp GAGGTCTTTTGTGCTGTGAATCACCCCACGTTCGCCTaGCCAGGGTTTCTAACCCAGGTTCGCAAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: EVFCAVNHPTFA*PGFLTQVRKAH
Trigger: ATGGGCCTTGCGAACCTGGGTTAGAAACCCTGGCCAGGCGAACGTGGGGTGATTCACAGCACAAAAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp GGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCAGCTaGCCACTTCGAAAGCAAAAGCTAAACCACCTCACA +
Preference number: 3 (lower is better)
Translates to: GSALVLRPGGRS*PLRKQKLNHLT
Trigger: TGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCACCAGGTCTCAGCACAAGAGCGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp TCACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGACCGCCCCACTCACTTTaGGTCAAAACCAGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: SPSPCLSRLCDFLRTQSRPPHSL*VKTSLH
Trigger: GTGGAGGCTGGTTTTGACCAAAAGTGAGTGGGGCGG...TCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp CATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTaGTGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCT +
Preference number: 3 (lower is better)
Translates to: HSVQRKRSCAET*WPQLATSKAKA
Trigger: AGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp GCGAGGAGGGCGGGCAGGTCTCAAACTTGCTGGCCGCACTCCACTCTTGGTGTGAAGGTAAAGACCCAATaGAAACAAGAGAAAAGGGGA +
Preference number: 3 (lower is better)
Translates to: ARRAGRSQTCWPHSTLGVKVKTQ*KQEKRG
Trigger: TCCCCTTTTCTCTTGTTTCAATTGGGTCTTTACCTT...CACACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCCGCCCTCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR-3UTR CAA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCGGCTGCAGGCTGTCTTaGGTTTGGGAACCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVGCRLS*VWEPGK
Trigger: CTTCCCTGGTTCCCAAACCAAAGACAGCCTGCAGCC...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp CCCGGAGGGGACTGTCCCCCAATGGAAGCACTGAATTaGCCGTGGACAACTAAAGATCGAGGAGGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: PGGDCPPMEALN*PWTTKDRGGRK
Trigger: TTTCCTTCCTCCTCGATCTTTAGTTGTCCACGGTCAATTCAGTGCTTCCATTGGGGGACAGTCCCCTCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp GTCATCCCGGAGGGGACTGTCCCCCAATGGAAGCACTaGATTGACCGTGGACAACTAAAGATCGAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: VIPEGTVPQWKH*IDRGQLKIEEE
Trigger: TTCCTCCTCGATCTTTAGTTGTCCACGGTCAATTCAGTGCTTCCATTGGGGGACAGTCCCCTCCGGGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp GGAAAGATGTGTCCTGCTGCTGCAGACAAAAGCAACTaGAGCACCCACACAGAAAGCCCCGTGAATCCACAG +
Preference number: 3 (lower is better)
Translates to: GKMCPAAADKSN*STHTESPVNPQ
Trigger: CTGTGGATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGGACACATCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CCA 72 bp TCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTaGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAA +
Preference number: 3 (lower is better)
Translates to: SVQRKRSCAETW*PQLATSKAKAK
Trigger: TTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR TCA 72 bp ACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTaGATCCACAGACCCACAGATTGCGCAAATAGTTCT +
Preference number: 3 (lower is better)
Translates to: TKATAAPTQKAP*IHRPTDCANSS
Trigger: AGAACTATTTGCGCAATCTGTGGGTCTGTGGATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR GCA 72 bp CATAAAGGGCTGAGTAAGAGGAAAGATGTGTCCTGCTaGTGCAGACAAAAGCAACTGCAGCACCCACACAGA +
Preference number: 3 (lower is better)
Translates to: HKGLSKRKDVSC*CRQKQLQHPHR
Trigger: TCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGGACACATCTTTCCTCTTACTCAGCCCTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCCAGGTGCCCCCGCCTTaGCCACCCCCTCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RSHPWSSALPEPRSSPWAQVPPP*PPPQGS
Trigger: GGAGCCCTGAGGGGGTGGTCAAGGCGGGGGCACCTG...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCGCGGGAAGGGCAGGGTaGGCACCAAGGGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCAGRAG*APRGPC
Trigger: ACAAGGGCCCCTTGGTGCCCACCCTGCCCTTCCCGC...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCTGGCTGACAGCTCCATaGGGGGCGGCGGGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLWLTAP*GAAGER
Trigger: CCGCTCGCCCGCCGCCCCGCATGGAGCTGTCAGCCA...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGCACTCGCCAGCCGCCTaGAGGACGTCTGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQHSPAA*RTSGAG
Trigger: ACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTG...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGCGCCTGCAGGACGTCTaGGGCCGGTGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQRLQDV*GRWLLQ
Trigger: CTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCG...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCAAGCCCTCAGCTGCCTaGGCCTCGCGGAAGGTGACG +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCKPSAA*ASRKVT
Trigger: CGTCACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTT...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCGGGGCCGGTGGCTCCTaGAGGAAGAGCTCCCGTCGA +
Preference number: 4 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFGAGGS*RKSSRR
Trigger: TCGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCC...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCGCCTGGAGCATGGGGTaGCATCGCACCTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCAWSMG*HRTCAR
Trigger: TCTGGCACAGGTGCGATGGCACCCCATGCTCCAGGC...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGGGGGCCGGTGGCTCCTaGAGCAGAAGCCGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQGAGGS*SRSRLG
Trigger: ACCCAAGCGGCTTCTGCTGCAGGAGCCACCGGCCCC...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401405.7
CDS-3UTR CCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCAGCCGCAGGTACTTGTaGGCCTTTCGGGGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCSRRYL*AFRGLR
Trigger: CCGCAAGCCCCGAAAGGCCCACAAGTACCTGCGGCT...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCAACCAGGCTGGGGTaGCCACTCAAGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVPTRLG*PLKGEG
Trigger: ACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGG...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGCGGCTGTGCCAGGGGTaGGGGTACCTCCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQRLCQG*GYLLRT
Trigger: GGTGCGGAGGAGGTACCCCCACCCCTGGCACAGCCG...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTTGTGCTGAGACCTGGTaGCCGCAGCTGGCCACTTCG +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVCAETW*PQLATS
Trigger: CGAAGTGGCCAGCTGCGGCCACCAGGTCTCAGCACA...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTAGTCAAGGGCTGCCCTaGGAACGTGGTGGGACACTC +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVSQGLP*ERGGTL
Trigger: GAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACT...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCAGCTCCGCAGGTCCATaGTGTACAGCCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCSSAGP*CTAAAA
Trigger: TGCTGCAGCGGCTGTACAGCATGGACCTGCGGAGCT...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTGCTTCTCCTTGCCCTTaGCCTTGTGGGAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVASPCP*PCGSSA
Trigger: TGCGGAGCTCCCACAAGGCCAAGGGCAAGGAGAAGC...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGGCTCCCGCTGCCGAGTaGGCACGTCAGGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQAPAAE*ARQGEA
Trigger: TGCTTCTCCCTGACGTGCCCACTCGGCAGCGGGAGC...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGAAGCCCTCAGCTGCCTaGGCCTCGCGGAAGGTGACG +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQKPSAA*ASRKVT
Trigger: CGTCACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTT...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGACCAGCCAACCAGGCTaGGGTGGCCACTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LREARQRSLHRNTAQPQLTSQPG*GGHSRE
Trigger: CTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGT...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCGCACCTTGCCAGGGGTaGGCTGGGGCAAAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLAPCQG*AGAKPA
Trigger: GGCAGGCTTTGCCCCAGCCCACCCCTGGCAAGGTGC...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGCATTTAGGTTGGATGGGGAGCTGGCTGCCCTGAGCTaGGCACCTCAGGCCCACCCG +
Preference number: 4 (lower is better)
Translates to: PPQEYSSAPAVAFRLDGELAALS*APQAHP
Trigger: CGGGTGGGCCTGAGGTGCCCAGCTCAGGGCAGCCAG...CTCCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGCTGTATTCCTGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGTGGGCCACTCTGGGCTaGAAGGAGGCCTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRWATLG*KEACTA
Trigger: GGCCGTGCAGGCCTCCTTCCAGCCCAGAGTGGCCCA...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGTCTCCTCGTAGGCCATaGCGAGGCGGGGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQSPRRP*RGGGPR
Trigger: TCTTGGACCCCCGCCTCGTCATGGCCTACGAGGAGA...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR TCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGACCCCTGCCCTCCACTaGAAGCCGCAAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQTPALH*KPQAGS
Trigger: GCTACCTGCTTGCGGCTTTCAGTGGAGGGCAGGGGT...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGTCCCTGGGCTGGAGGTaGATCAGGTCATCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQSLGWR*IRSSRR
Trigger: CCTCCGGGATGACCTGATTCACCTCCAGCCCAGGGA...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGGGGGGATGGGGAGCGTaGCTTCTGCTGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQGGWGA*LLLEAA
Trigger: GGCAGCTTCCAGCAGAAGTCACGCTCCCCATCCCCC...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGGAGTTCAGCTCTCCCTaGGCCACGGAGTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: LREARQRSLHRNTAQPQLEFSSP*ATEFPM
Trigger: CATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTC...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGTCCACGGCGAACACCTaGTCGCCGATGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQSTANT*SPMADS
Trigger: GCTGTCAGCCATCGGCGAGCAGGTGTTCGCCGTGGA...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCAGCAGAGCTTCTCCTTaGCCTTGGCCTTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCSRASP*PWPCGS
Trigger: GCTCCCACAAGGCCAAGGGCAAGGAGAAGCTCTGCT...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGCCTCAGGGCTCCCGCTaGCGAGTGGGCACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAAPQGSR*RVGTSG
Trigger: CCCTGACGTGCCCACTCGGCAGCGGGAGCCCTGAGG...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGGACACAGAGCAGAGCTaGGAGGAGGGCGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRDTEQS*EEGGQV
Trigger: GACCTGCCCGCCCTCCTCGCAGCTCTGCTCTGTGTC...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCCAACAGAGCACCCCATaGAGAAAGGGCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSHPWSSALPEPRSSPWAQQSTP*RKGCRL
Trigger: CAGCCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTG...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTATGGGTGGTGATTCCTaGCGCTCCTTGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVMGGDS*RSLSRP
Trigger: GGGTCTGGACAAGGAGCGGCAGGAATCACCACCCAT...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTGTGGAGGTCACTGTCTaGCTTGCTCTACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVVEVTV*LALLGH
Trigger: GTGGCCCAGTAGAGCAAGGCAGACAGTGACCTCCAC...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCTGTGGCTCTCCAGGTTaGGCCCGCGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: SKLILCKGSALVLRPGGRCGSPG*ARGAGT
Trigger: AGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACA...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATCGCCTGCAGGACGTCTaGGGCCGGTGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PAAADKSNCSTHTESPVNRLQDV*GRWLLQ
Trigger: CTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCG...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGATCCTGCCCTGGGGGTaGTACCCCAACTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQILPWG*YPNSQS
Trigger: GCTCTGGGAGTTGGGGTACCACCCCCAGGGCAGGAT...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTTTCGCAAGGCCCATGTaGACACGTCTGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVFARPM*TRLQPH
Trigger: GTGTGGCTGCAGACGTGTCCACATGGGCCTTGCGAA...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGTGCCCACACCTGGGTTaGCTGAGTTGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQCPHLG*LSWRGG
Trigger: CCCTCCCCTCCAACTCAGCCAACCCAGGTGTGGGCA...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGGCTGCCCTGAGAACGTaGTGGGACACTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQAALRT*WDTPSL
Trigger: GAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGC...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCCATCTTTACCTCCGCTaGGCACCCCTCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RSHPWSSALPEPRSSPWAHLYLR*APLSWK
Trigger: CTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATG...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CAA 72 bp GAGCAGAGCTGCGAGGAGGGCGGGCAGGTCTCAAACTaGCTGGCCGCACTCCACTCTTGGTGTGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: EQSCEEGGQVSN*LAALHSWCVLP
Trigger: GGGTAACACACACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCCGCCCTCCTCGCAGCTCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACCTGCTCGCCGATGGCTaGCAGCTCCATGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGRTGSRRLKACADTSHNLLADG*QLHAGR
Trigger: CCGCCCCGCATGGAGCTGTCAGCCATCGGCGAGCAG...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTGGTGTCCCGGGCAGGTaGTCCTGTCCCCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIGVPGR*SCPHPA
Trigger: GGCAGGATGGGGACAGGATCACCTGCCCGGGACACC...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGCGCGCTTCTTCCGGATaGTCTCCACGGCGAACACCT +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQRASSG*SPRRTP
Trigger: AGGTGTTCGCCGTGGAGAGCATCCGGAAGAAGCGCG...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGCGGGGGTCCAAGATGTaGTCTTCTGGCTCCCACGTG +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQRGSKM*SSGSHV
Trigger: CACGTGGGAGCCAGAAGAGCACATCTTGGACCCCCG...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCGTGCATGAGCGTTTCTaGACAGGCCAGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCVHERF*TGQVMR
Trigger: CCTCATCACCTGGCCTGTGCAGAAACGCTCATGCAC...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGAACTTAGCAGACGCCTaGACACCCGCAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQNLADA*TPAAWP
Trigger: GGGCCAGGCTGCGGGTGTGCAGGCGTCTGCTAAGTT...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGACACCTGCTCGCCGATaGCTGACAGCTCCATGCGGG +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRTPARR*LTAPCG
Trigger: CCCGCATGGAGCTGTCAGCCATCGGCGAGCAGGTGT...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATCCTGCCCTGGGGGTaGTACCCCAACTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQILPWG*YPNSQS
Trigger: GCTCTGGGAGTTGGGGTACCACCCCCAGGGCAGGAT...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCCACCCCACGTTCGCCTaGCCAGGGTTTCTAACCCAG +
Preference number: 4 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFHPTFA*PGFLTQ
Trigger: CTGGGTTAGAAACCCTGGCCAGGCGAACGTGGGGTG...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGGCCCTGAGAACGTGGTaGGACACTCCCTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQALRTW*DTPSLP
Trigger: AGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGC...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTGACGTCTGGGGCCGGTaGCTCCTGCAGCAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIDVWGR*LLQQKP
Trigger: CGGCTTCTGCTGCAGGAGCCACCGGCCCCAGACGTC...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401405.7
CDS-3UTR GCA 90 bp GCTGGCCGCACTCCACTCTTGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAATCCACGGCGAACACCTaGTCGCCGATGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: AGRTPLLVCVTLTLTAKESTANT*SPMADS
Trigger: GCTGTCAGCCATCGGCGAGCAGGTGTTCGCCGTGGA...TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AGGGCTGAAAAGTCACCTGAGTCAGAAAGAACAAGAACCCCTCACGGGAGGAAGCACTCGCCAGCCGCCTaGAGGACGTCTGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RAEKSPESERTRTPHGRKHSPAA*RTSGAG
Trigger: ACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTG...CTTCCTCCCGTGAGGGGTTCTTGTTCTTTCTGACTCAGGTGACTTTTCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCGAAGAAGCCCTCAGCTaGCTGGGCCTCGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SKLILCKGSALVLRPGGREEALS*LGLAEG
Trigger: ACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTTCTTC...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCCCATGTGGACACGTCTaGAGCCACACATGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCPCGHV*SHTCFH
Trigger: GTGAAAGCATGTGTGGCTGCAGACGTGTCCACATGG...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGCATTTAGGTTGGATGGGGAGCCTGTGCCAGACCCCTaGCCTCCACTGAAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PPQEYSSAPAVAFRLDGEPVPDP*PPLKAA
Trigger: TGCGGCTTTCAGTGGAGGGCAGGGGTCTGGCACAGG...CTCCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGCTGTATTCCTGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCGGGGAGCGTGACTTCTaGTGGAAGCTGCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLGERDF*WKLPAM
Trigger: CATGGCTGGCAGCTTCCAGCAGAAGTCACGCTCCCC...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp GCTGGCCGCACTCCACTCTTGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAACATGAGCCACCTGGCTaGCCTGAGCTGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: AGRTPLLVCVTLTLTAKEHEPPG*PELGTS
Trigger: TGAGGTGCCCAGCTCAGGGCAGCCAGGTGGCTCATG...TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTCATTCCAGGCGGCTGTaGCAGGGGTGGGGGTACCTC +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIHSRRL*QGWGYL
Trigger: GAGGTACCCCCACCCCTGGCACAGCCGCCTGGAATG...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCCTTGGAATCAACTCGTaGCCCCGACCCCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFLGINS*PRPLPD
Trigger: ATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAG...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGCTTTCACGGGGCACATaGGAACGTACACGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQLSRGT*ERTREG
Trigger: CCCTTCGCGTGTACGTTCCCATGTGCCCCGTGAAAG...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGTGTATGCCTGGAGCATaGGGTGCCATCGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQCMPGA*GAIAPV
Trigger: CACAGGTGCGATGGCACCCCATGCTCCAGGCATACA...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCCTGTGGCATTTAGGTTaGATGGGGAGGGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: RSHPWSSALPEPRSSPWALWHLG*MGRGCR
Trigger: TCTGCATCCCCTCCCCATCCAACCTAAATGCCACAG...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGCTCCACAGCTGGAGATaGGTGGTGATTCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQLHSWR*VVIPAA
Trigger: AGCGGCAGGAATCACCACCCATCTCCAGCTGTGGAG...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGGCACATGGGAACGTACACGCGAAGGGTAATGCGTGCACACCTGTGCAGCCAGTCTGCCTTGCTCTACTaGGCCACTCTGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GHMGTYTRRVMRAHLCSQSALLY*ATLGWK
Trigger: CTTCCAGCCCAGAGTGGCCCAGTAGAGCAAGGCAGA...CTGGCTGCACAGGTGTGCACGCATTACCCTTCGCGTGTACGTTCCCATGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp AGGGCTGAAAAGTCACCTGAGTCAGAAAGAACAAGAACCCCTCACGGGAGGAAGGGTGTCCCGGGCAGGTaGTCCTGTCCCCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RAEKSPESERTRTPHGRKGVPGR*SCPHPA
Trigger: GGCAGGATGGGGACAGGATCACCTGCCCGGGACACC...CTTCCTCCCGTGAGGGGTTCTTGTTCTTTCTGACTCAGGTGACTTTTCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGGGGGCGGGAACTTCTTaGGCGAGAGCCGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAAGAGTS*ARAAGT
Trigger: AGTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCC...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTGAAGAAGCCCTCAGCTaGCTGGGCCTCGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIEEALS*LGLAEG
Trigger: ACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTTCTTC...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGAAGCAGGTAGCAAGGTaGATGCAAGGTGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LREARQRSLHRNTAQPQLKQVAR*MQGGVS
Trigger: ACTCACCCCACCTTGCATGCACCTTGCTACCTGCTT...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGAAGAGCTCCCGTCGATaGCTGTGGCTCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRKSSRR*LWLSRL
Trigger: CAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTT...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCAAGGTGCATGCAAGGTaGGGTGAGTGCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFKVHAR*GECRCG
Trigger: ACCACACCTGCACTCACCCCACCTTGCATGCACCTT...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCCCACATCTGTATGCCTaGAGCATGGGGTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLPHLYA*SMGCHR
Trigger: GCGATGGCACCCCATGCTCCAGGCATACAGATGTGG...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATTTGCCAGGGGTGGGCTaGGGCAAAGCCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: PAAADKSNCSTHTESPVNLPGVG*GKACPS
Trigger: TGATGGGCAGGCTTTGCCCCAGCCCACCCCTGGCAA...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATGAAGTCACTCCTCACTaGCAGGGAAGCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: PAAADKSNCSTHTESPVNEVTPH*QGSHGP
Trigger: GGGCCCGTGGCTTCCCTGCCAGTGAGGAGTGACTTC...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGGCTGCAGGCTGTCTTTaGTTTGGGAACCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LREARQRSLHRNTAQPQLAAGCL*FGNQGR
Trigger: TCTTCCCTGGTTCCCAAACCAAAGACAGCCTGCAGC...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGCATTTAGGTTGGATGGGGAGCCCAGGTCACACCCCTaGAGTTCAGCTCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PPQEYSSAPAVAFRLDGEPRSHP*SSALPE
Trigger: CTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGG...CTCCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGCTGTATTCCTGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACCACGGTCACCTCACTTaGGGGGAGCGCAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGRTGSRRLKACADTSHNHGHLT*GERRCP
Trigger: TGGACACCTGCGCTCCCCTCAAGTGAGGTGACCGTG...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACACACACCTGGGTTGGCTaGGTTGGAGGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTHTWVG*VGGEGR
Trigger: TCTGCCCTCCCCTCCAACTCAGCCAACCCAGGTGTG...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCGACTCTGTGACTTCCTaGGGACACAGAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLDSVTS*GHRAEL
Trigger: CAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTC...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTCGCGCTTCTTCCGGATaGTCTCCACGGCGAACACCT +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIRASSG*SPRRTP
Trigger: AGGTGTTCGCCGTGGAGAGCATCCGGAAGAAGCGCG...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATCGGGGGTCCAAGATGTaGTCTTCTGGCTCCCACGTG +
Preference number: 4 (lower is better)
Translates to: PAAADKSNCSTHTESPVNRGSKM*SSGSHV
Trigger: CACGTGGGAGCCAGAAGAGCACATCTTGGACCCCCG...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGCTTCCTATACCCCGATaGTCGGTCTCTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQLPIPR*SVSLLL
Trigger: AAGGAGGAGAGAGACCGAGCATCGGGGTATAGGAAG...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGCTGTGCAGCCAGGTGTaGATGAGCGTTTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRLCSQV*MSVSAQ
Trigger: CTGTGCAGAAACGCTCATGCACACCTGGCTGCACAG...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCGTCTGCAGCCACACATaGTTTCACGGGGCACATGGG +
Preference number: 4 (lower is better)
Translates to: SKLILCKGSALVLRPGGRVCSHT*FHGAHG
Trigger: CCCATGTGCCCCGTGAAAGCATGTGTGGCTGCAGAC...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCGTGCCATCGCACCTGTaGCAGACCCCTGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVVPSHL*QTPALH
Trigger: GTGGAGGGCAGGGGTCTGGCACAGGTGCGATGGCAC...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACCGCAGCCTGGCCCGGTaGAGCCGAGAAACCACATCT +
Preference number: 4 (lower is better)
Translates to: GGRTGSRRLKACADTSHNRSLAR*SRETTS
Trigger: AGATGTGGTTTCTCGGCTGCACCGGGCCAGGCTGCG...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp GAGTCAAGGGCTGCCCTGAGAACGTGGTGGGACACTCCCTCCCTCCCTGACTGCCCACAAAAGGAAAAGTaGCCACGGGTCTCTACATTC +
Preference number: 4 (lower is better)
Translates to: ESRAALRTWWDTPSLPDCPQKEK*PRVSTF
Trigger: GAATGTAGAGACCCGTGGGCACTTTTCCTTTTGTGG...GCAGTCAGGGAGGGAGGGAGTGTCCCACCACGTTCTCAGGGCAGCCCTTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTTCGAAGCTCATTCTGTaGAAAGGAAGCGCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVSKLIL*KGSALV
Trigger: CACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCTCCCGTCGATGGCTGTaGCTCTCCAGGTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVSRRWL*LSRLGP
Trigger: CGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGA...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCAGAAAGGGCAGGTGGTaGGAGAGTAGTGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFRKGRW*ESSGIF
Trigger: GAAGATCCCACTACTCTCCCACCACCTGCCCTTTCT...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGTCTACTGGGCCACTCTaGGCTGGAAGGAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAASTGPL*AGRRPA
Trigger: TGCAGGCCTCCTTCCAGCCCAGAGTGGCCCAGTAGA...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCAGAGGGCTGCGGGGGTaGAGGTCACTGTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SPSTHTLSKGMCLESTRARGLRG*RSLSAL
Trigger: CAAGGCAGACAGTGACCTCCACCCCCGCAGCCCTCT...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CAA 72 bp CCACAGCTGGAGATGGGTGGTGATTCCTGCCGCTCCTaGTCCAGACCCACCCCACGTATTCCTCTAGATTCC +
Preference number: 4 (lower is better)
Translates to: PQLEMGGDSCRS*SRPTPRIPLDS
Trigger: GGAATCTAGAGGAATACGTGGGGTGGGTCTGGACAAGGAGCGGCAGGAATCACCACCCATCTCCAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACGCTGGAGATGGGTGGTaGTTCCTGCCGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GGRTGSRRLKACADTSHNAGDGW*FLPLLV
Trigger: GACAAGGAGCGGCAGGAATCACCACCCATCTCCAGC...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGGCCATAAAGGGCTaGGTAAGAGGAAAGATGTGT +
Preference number: 4 (lower is better)
Translates to: LREARQRSLHRNTAQPQLWAIKG*VRGKMC
Trigger: ACACATCTTTCCTCTTACTCAGCCCTTTATGGCCCA...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTCTTCTGGCTCCCACGTaGTGTACTTTGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGILLAPT*CTLGAI
Trigger: GATGGCCCCCAAAGTACAGCACGTGGGAGCCAGAAG...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGACTCCCAGAACCAGCTaGTGCGTCACTAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRTPRTS*CVTRGE
Trigger: TTCTCCTCTAGTGACGCAGCAGCTGGTTCTGGGAGT...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGACAGAAGCACAGCGCCTaGCCCCAGAACAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: SPSPCLSRLCDFLRTQSRQKHSA*PQNKGT
Trigger: TGTCCCCTTGTTCTGGGGGCAGGCGCTGTGCTTCTG...TCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTGCAGCAGAAGCCGCTTaGGTTTCGGACCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIAAEAA*VSDLSS
Trigger: GGAAGAGAGGTCCGAAACCCAAGCGGCTTCTGCTGC...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCCAGAGAAAGGGCAGGTaGTGGGAGAGTAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: SKLILCKGSALVLRPGGRQRKGR*WESSGI
Trigger: GATCCCACTACTCTCCCACCACCTGCCCTTTCTCTG...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGAGGTCTCAAACTTGCTaGCCGCACTCCACTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRRSQTC*PHSTLG
Trigger: ACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCT...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCAGAGACTCAGGGATCTaGGAAGCCTGTCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLRDSGI*EACQQS
Trigger: GCTCTGTTGACAGGCTTCCCAGATCCCTGAGTCTCT...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGCATTTAGGTTGGATGGGGAGACAGGGCTCCACAGCTaGAGATGGGTGGTGATTCCT +
Preference number: 4 (lower is better)
Translates to: PPQEYSSAPAVAFRLDGETGLHS*RWVVIP
Trigger: AGGAATCACCACCCATCTCCAGCTGTGGAGCCCTGT...CTCCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGCTGTATTCCTGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACGGGACAGGAGGAGCTTaGCAACGAGGTCATCACCCG +
Preference number: 4 (lower is better)
Translates to: GGRTGSRRLKACADTSHNGTGGA*QRGHHP
Trigger: CGGGTGATGACCTCGTTGCCAAGCTCCTCCTGTCCC...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
3UTR CAA 72 bp CGGGCAGGTCTCAAACTTGCTGGCCGCACTCCACTCTaGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RAGLKLAGRTPL*VCVTLTLTAKE
Trigger: TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGCCGACGTTCCATTTTTaGACCTGCGCAACGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQPTFHF*TCATFS
Trigger: GGAAAACGTTGCGCAGGTTCAAAAATGGAACGTCGG...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp ACCCTCTATCATCTTTACCTCCGCTGGGCACCCCTCTCCTGGAAGAGTCCCCTCGATGTGTCCTGCTGCTaGAGACAAAAGCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: TLYHLYLRWAPLSWKSPLDVSCC*RQKQLQ
Trigger: CTGCAGTTGCTTTTGTCTGCAGCAGCAGGACACATC...GAGGGGACTCTTCCAGGAGAGGGGTGCCCAGCGGAGGTAAAGATGATAGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTCAGAGAAAGGGCAGGTaGTGGGAGAGTAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIQRKGR*WESSGI
Trigger: GATCCCACTACTCTCCCACCACCTGCCCTTTCTCTG...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCTTTCCCCCAGGGAGCTaGCTCACTACAGCCCATGAG +
Preference number: 4 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAFPPGS*LTTAHE
Trigger: CTCATGGGCTGTAGTGAGCCAGCTCCCTGGGGGAAA...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAAGAGGTCACCTGTCCTaGAGGATGGTCCTAACGGCC +
Preference number: 4 (lower is better)
Translates to: SPSPCLSRLCDFLRTQSRRGHLS*RMVLTA
Trigger: GGCCGTTAGGACCATCCTCCAGGACAGGTGACCTCT...TCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATCACCCCCAAGAGTACTaGCCTTTTAAGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PAAADKSNCSTHTESPVNHPQEY*PFKRAA
Trigger: CGCAGCCCTCTTAAAAGGCCAGTACTCTTGGGGGTG...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACACCTGGTGGCCGCAGCTaGCCACTTCGAAAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTPGGRS*PLRKQK
Trigger: CTTTTGCTTTCGAAGTGGCCAGCTGCGGCCACCAGG...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp CCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGCATTTAGGTTGGATGGGGAGCCCCAATGGAAGCACTaGATTGACCGTGGACAACTA +
Preference number: 4 (lower is better)
Translates to: PPQEYSSAPAVAFRLDGEPQWKH*IDRGQL
Trigger: TAGTTGTCCACGGTCAATTCAGTGCTTCCATTGGGG...CTCCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGCTGTATTCCTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTCTTCCTATACCCCGATaGTCGGTCTCTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGILPIPR*SVSLLL
Trigger: AAGGAGGAGAGAGACCGAGCATCGGGGTATAGGAAG...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCGCGAAGGGTAATGCGTaGACACCTGTGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVAKGNA*TPVQPG
Trigger: ACCTGGCTGCACAGGTGTGCACGCATTACCCTTCGC...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCTTAGGAGTCAAGGGCTaGCCTGAGAACGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SPSTHTLSKGMCLESTRALGVKG*PENVVG
Trigger: TCCCACCACGTTCTCAGGGCAGCCCTTGACTCCTAA...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGAAACCAGAAAACAAGTaGACCTTGCCAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAAKPENK*TLPGVG
Trigger: GCCCACCCCTGGCAAGGTGCACTTGTTTTCTGGTTT...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGCATTTAGGTTGGATGGGGAGCTCAGCAAAGGCATGTaGTTGGAATCAACTCGTGCC +
Preference number: 4 (lower is better)
Translates to: PPQEYSSAPAVAFRLDGELSKGM*LESTRA
Trigger: GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAG...CTCCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGCTGTATTCCTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp AGGGCTGAAAAGTCACCTGAGTCAGAAAGAACAAGAACCCCTCACGGGAGGAAGGCAGCAGAAGCCGCTTaGGTTTCGGACCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RAEKSPESERTRTPHGRKAAEAA*VSDLSS
Trigger: GGAAGAGAGGTCCGAAACCCAAGCGGCTTCTGCTGC...CTTCCTCCCGTGAGGGGTTCTTGTTCTTTCTGACTCAGGTGACTTTTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CCTCCACAGGAATACAGCTCAGCCCCAGCTGTGGCATTTAGGTTGGATGGGGAGTCAAGGGAGAGGGTTTaGGCCTTCCAATGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PPQEYSSAPAVAFRLDGESRERV*AFQCSF
Trigger: AAAGGAGCATTGGAAGGCCCAAACCCTCTCCCTTGA...CTCCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGCTGTATTCCTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAGCTGCGTCTCCCCTACAGGACTaGAAGAGAGGGAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPCLSRLCDFLRTQSRAASPLQD*KRGRSH
Trigger: GTGACTTCTCCCTCTCTTCCAGTCCTGTAGGGGAGA...CGCAGCTCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp TCGAAGCTCATTCTGTGCAAAGGAAGCGCTCTTGTGCTGAGACCTGGTGGCCGCAGGCTGTCTTTGGTTTaGGAACCAGGGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SKLILCKGSALVLRPGGRRLSLV*EPGKKG
Trigger: TCCCTTCTTCCCTGGTTCCCAAACCAAAGACAGCCT...GCGGCCACCAGGTCTCAGCACAAGAGCGCTTCCTTTGCACAGAATGAGCTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCGTGCAGGTGTGGTGGTaGGGTCTTTTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAVQVWW*GLLCCE
Trigger: TTCACAGCACAAAAGACCTCACCACCACACCTGCAC...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGTCTCAAAGCCTGTGCTaGTACATCACACAACTTAGC +
Preference number: 4 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRSQSLC*YITQLS
Trigger: GCTAAGTTGTGTGATGTATCAGCACAGGCTTTGAGA...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCACACAGAAAGCCCCGTaGATCCACAGACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: SPSTHTLSKGMCLESTRATQKAP*IHRPTD
Trigger: ATCTGTGGGTCTGTGGATTCACGGGGCTTTCTGTGT...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp AGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTCCCCATGGGCCTACATTCATTTAGTCTaGACAAAGCTCGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RSHPWSSALPEPRSSPWAYIHLV*TKLEAH
Trigger: ATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTA...GGCCCATGGGGAACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CTCAGAGAGGCACGGCAGAGGTCCCTCCACAGGAATACAGCTCAGCCCCAGCTGCACAGACCCACAGATTaGGCAAATAGTTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LREARQRSLHRNTAQPQLHRPTD*ANSSLK
Trigger: TTTCAAAGAACTATTTGCGCAATCTGTGGGTCTGTG...CAGCTGGGGCTGAGCTGTATTCCTGTGGAGGGACCTCTGCCGTGCCTCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGAGGAAAGATGTGTCCTaGTGCTGCAGACAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQRKDVS*CCRQKQ
Trigger: TTGCTTTTGTCTGCAGCAGCAGGACACATCTTTCCT...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATGTTTGGGCCTTCCAATaGTCCTTTAACTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PAAADKSNCSTHTESPVNVWAFQ*SFNSQN
Trigger: GTTCTGGGAGTTAAAGGAGCATTGGAAGGCCCAAAC...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACGAATCACCCTCTCCTTaGCTCAGTAGACTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GGRTGSRRLKACADTSHNESPSP*LSRLCD
Trigger: GTCACAGAGTCTACTGAGGCAAGGAGAGGGTGATTC...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp GCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTTTTAGAAAGGGCAGGTGGTaGGAGAGTAGTGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: AGGGRVVGSSPLLLLGIFRKGRW*ESSGIF
Trigger: GAAGATCCCACTACTCTCCCACCACCTGCCCTTTCT...AAAAATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR GCA 90 bp GCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTTTTACTTCTGCTGGAAGCTaGCAGCCATGTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: AGGGRVVGSSPLLLLGIFTSAGS*QPCSKV
Trigger: GACTTTGGAACATGGCTGGCAGCTTCCAGCAGAAGT...AAAAATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR TCA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTATGGAAGCACTGAATTaGCCGTGGACAACTAAAGAT +
Preference number: 4 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIMEALN*PWTTKD
Trigger: ATCTTTAGTTGTCCACGGTCAATTCAGTGCTTCCAT...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR GCA 90 bp TCACCCTCTCCTTGCCTCAGTAGACTCTGTGACTTCCTGAGGACACAGAGCAGAAAAGATGTGTCCTGCTaGTGCAGACAAAAGCAACTG +
Preference number: 4 (lower is better)
Translates to: SPSPCLSRLCDFLRTQSRKDVSC*CRQKQL
Trigger: CAGTTGCTTTTGTCTGCAGCAGCAGGACACATCTTT...TCTGCTCTGTGTCCTCAGGAAGTCACAGAGTCTACTGAGGCAAGGAGAGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAATTGCCCTTGGCCTTGTaGGAGCTCCGCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: QIHSFSLNKARSSFCAKELPLAL*ELRRSM
Trigger: CATGGACCTGCGGAGCTCCCACAAGGCCAAGGGCAA...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAATCTTGTGCTGAGACCTaGTGGCCGCAGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: QIHSFSLNKARSSFCAKESCAET*WPQLAT
Trigger: AGTGGCCAGCTGCGGCCACCAGGTCTCAGCACAAGA...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAAGCTCAGCCCCAGCTGTaGCATTTAGGTTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: QIHSFSLNKARSSFCAKEAQPQL*HLGWMG
Trigger: CCCCATCCAACCTAAATGCCACAGCTGGGGCTGAGC...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CCA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAAGAGCGTGACTTCTGCTaGAAGCTGCCAGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: QIHSFSLNKARSSFCAKEERDFC*KLPAMF
Trigger: GAACATGGCTGGCAGCTTCCAGCAGAAGTCACGCTC...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS GCA 90 bp TGCTCTCCACGGCGAACACCTGCTCGCCGATGGCTGACAGCTCCATaGGGGGCGGCGGGCGAGCGGGCCCGGGGCCGGGCCGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: CSPRRTPARRWLTAP*GAAGERARGRAGPG
Trigger: CCCCGGCCCGGCCCGGCCCCGGGCCCGCTCGCCCGCCGCCCCGCATGGAGCTGTCAGCCATCGGCGAGCAGGTGTTCGCCGTGGAGAGCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216133.10
ENST00000434260.1
ENST00000477827.1
ENST00000482294.1
CDS CCA 90 bp GGGCTGCGCAGCAGGCTCCCACTCGCCAGCCGCCTGCAGGACGTCTaGGGCCGGTGGCTCCTGCAGGAAGAGCTCCCGTCGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GLRSRLPLASRLQDV*GRWLLQEELPSMAV
Trigger: CACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGAGCCTGCTGCGCAGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS GCA 90 bp TCCTCTTCAGGGGGCTGCGCAGCAGGCTCCCACTCGCCAGCCGCCTaGAGGACGTCTGGGGCCGGTGGCTCCTGCAGGAAGAGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: SSSGGCAAGSHSPAA*RTSGAGGSCRKSSR
Trigger: ACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGAGCCTGCTGCGCAGCCCCCTGAAGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS GCA 90 bp TCCTCTTCAGGGGGCTGCGCAGCAGGCTCCCACTCGCCAGCCGCCTaGAGGACGTCTGGGGCCGGTGGCTCCTGCAGCAGAAGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: SSSGGCAAGSHSPAA*RTSGAGGSCSRSRL
Trigger: CAAGCGGCTTCTGCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGAGCCTGCTGCGCAGCCCCCTGAAGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401405.7
CDS GCA 90 bp TCCCACTCGCCAGCCGCCTGCAGGACGTCTGGGGCCGGTGGCTCCTaGAGGAAGAGCTCCCGTCGATGGCTGTGGCTCTCCAGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: SHSPAACRTSGAGGS*RKSSRRWLWLSRLG
Trigger: GCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS GCA 90 bp CTGGTGGCCACAGCTTCCTGGTGCGAAGCGAGAGAGGCAGGGGTGTaGGCGCCCAGGGAGGCGGTGCTCCTGCTGCCCACTCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LVATASWCEAREAGV*APREAVLLLPTLGI
Trigger: GATGCCCAGAGTGGGCAGCAGGAGCACCGCCTCCCTGGGCGCGCACACCCCTGCCTCTCTCGCTTCGCACCAGGAAGCTGTGGCCACCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 90 bp TCTGGGGCCGGTGGCTCCTGCAGGAAGAGCTCCCGTCGATGGCTGTaGCTCTCCAGGTTGGGCCCGCGGGGCGGGAACTTCTTGCGCGAG +
Preference number: 5 (lower is better)
Translates to: SGAGGSCRKSSRRWL*LSRLGPRGGNFLRE
Trigger: CTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CCA 90 bp AGGACGTCTGGGGCCGGTGGCTCCTGCAGGAAGAGCTCCCGTCGATaGCTGTGGCTCTCCAGGTTGGGCCCGCGGGGCGGGAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: RTSGAGGSCRKSSRR*LWLSRLGPRGGNFL
Trigger: CAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCCAGACGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS GCA 90 bp GATGGCTGTGGCTCTCCAGGTTGGGCCCGCGGGGCGGGAACTTCTTaGGCGAGAGCCGCAGGTACTTGTGGGCCTTTCGGGGCTTGCGGA +
Preference number: 5 (lower is better)
Translates to: DGCGSPGWARGAGTS*ARAAGTCGPFGACG
Trigger: TCCGCAAGCCCCGAAAGGCCCACAAGTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CCA 90 bp AGGTGCCCCCGCCTTGACCACCCCCTCAGGGCTCCCGCTGCCGAGTaGGCACGTCAGGGAGAAGCAGAGCTTCTCCTTGCCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: RCPRLDHPLRAPAAE*ARQGEAELLLALGL
Trigger: AAGGCCAAGGGCAAGGAGAAGCTCTGCTTCTCCCTGACGTGCCCACTCGGCAGCGGGAGCCCTGAGGGGGTGGTCAAGGCGGGGGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000434260.1
ENST00000490741.1
CDS CCA 90 bp GCTCCTGCAGGAAGAGCTCCCGTCGATGGCTGTGGCTCTCCAGGTTaGGCCCGCGGGGCGGGAACTTCTTGCGCGAGAGCCGCAGGTACT +
Preference number: 5 (lower is better)
Translates to: APAGRAPVDGCGSPG*ARGAGTSCARAAGT
Trigger: AGTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS TCA 90 bp CCCACCCGGCGGTGCCGAGGACACCGTACTTCTCCTCGTAGGCCATaGCGAGGCGGGGGTCCAAGATGTGCTCTTCTGGCTCCCACGTGC +
Preference number: 5 (lower is better)
Translates to: PTRRCRGHRTSPRRP*RGGGPRCALLAPTC
Trigger: GCACGTGGGAGCCAGAAGAGCACATCTTGGACCCCCGCCTCGTCATGGCCTACGAGGAGAAGTACGGTGTCCTCGGCACCGCCGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477827.1
CDS CCA 90 bp CAGGGGTGTGCGCGCCCAGGGAGGCGGTGCTCCTGCTGCCCACTCTaGGCATCGTCACTCCCTTTACTGCCCCCTTCACTCAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QGCARPGRRCSCCPL*ASSLPLLPPSLRLE
Trigger: TTCCAGCCTGAGTGAAGGGGGCAGTAAAGGGAGTGACGATGCCCAGAGTGGGCAGCAGGAGCACCGCCTCCCTGGGCGCGCACACCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS GCA 90 bp GTCCCCAGGCTAGGGGCACAGCGCAACAGAAGCATCGAGGGCCTCTaGTCTGGGAGCCTCGTTCCTTCCCTCCTGACGAGCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: VPRLGAQRNRSIEGL*SGSLVPSLLTSCSG
Trigger: CCCACTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCAGAGGCCCTCGATGCTTCTGTTGCGCTGTGCCCCTAGCCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS GCA 90 bp AGGAAGCAGAGACCCAGCCATGGTGGGGCCCTGTCCCAGGGCTCATaGCTGTCGGGTGGGCAGCCAGGCCTAGAACCCAGGACCAAAGTG +
Preference number: 5 (lower is better)
Translates to: RKQRPSHGGALSQGS*LSGGQPGLEPRTKV
Trigger: CACTTTGGTCCTGGGTTCTAGGCCTGGCTGCCCACCCGACAGGCATGAGCCCTGGGACAGGGCCCCACCATGGCTGGGTCTCTGCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS GCA 90 bp TCCCGCTGCCGAGTGGGCACGTCAGGGAGAAGCAGAGCTTCTCCTTaGCCTTGGCCTTGTGGGAGCTCCGCAGGTCCATGCTGTACAGCC +
Preference number: 5 (lower is better)
Translates to: SRCRVGTSGRSRASP*PWPCGSSAGPCCTA
Trigger: GGCTGTACAGCATGGACCTGCGGAGCTCCCACAAGGCCAAGGGCAAGGAGAAGCTCTGCTTCTCCCTGACGTGCCCACTCGGCAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000434260.1
ENST00000490741.1
CDS-3UTR CAA 90 bp CCACCCGTCCCAGGTCACACCCCTGGAGTTCAGCTCTCCCTGAGCCACGGAGTTAGCTTCTCCTTGCCCTaGGCCTTGTGGGAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: PPVPGHTPGVQLSLSHGVSFSLP*ALWELR
Trigger: GCGGAGCTCCCACAAGGCCAAGGGCAAGGAGAAGCT...AACTCCGTGGCTCAGGGAGAGCTGAACTCCAGGGGTGTGACCTGGGACGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCGGCACCAAGGGGCCCTaGTCCACCAGCTCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFGTKGP*STSSGA
Trigger: GGCACCTGAGCTGGTGGACAAGGGCCCCTTGGTGCC...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS CCA 90 bp CAGGCTAGGGGCACAGCGCAACAGAAGCATCGAGGGCCTCTGCTCTaGGAGCCTCGTTCCTTCCCTCCTGACGAGCTGCAGTGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: QARGTAQQKHRGPLL*EPRSFPPDELQWAD
Trigger: ATCTGCCCACTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCAGAGGCCCTCGATGCTTCTGTTGCGCTGTGCCCCTAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 90 bp TCACCATCTCAACTCGAAGATGAGGAAGCAGAGACCCAGCCATGGTaGGGCCCTGTCCCAGGGCTCATGCCTGTCGGGTGGGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPSQLEDEEAETQPW*GPVPGLMPVGWAAR
Trigger: CCTGGCTGCCCACCCGACAGGCATGAGCCCTGGGACAGGGCCCCACCATGGCTGGGTCTCTGCTTCCTCATCTTCGAGTTGAGATGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp CCTGCTGCTGCAGACAAAAGCAACTGCAGCACCCACACAGAAAGCCCCGTGAATTCAGGTGCCCCCGCCTaGACCACCCCCTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: PAAADKSNCSTHTESPVNSGAPA*TTPSGL
Trigger: GAGCCCTGAGGGGGTGGTCAAGGCGGGGGCACCTGA...ATTCACGGGGCTTTCTGTGTGGGTGCTGCAGTTGCTTTTGTCTGCAGCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp GGAGGAAGGACAGGGTCCAGACGTCTCAAAGCCTGTGCTGATACATCACACAACCTGTGGCTCTCCAGGTaGGGCCCGCGGGGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: GGRTGSRRLKACADTSHNLWLSR*GPRGGN
Trigger: GTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAG...GTTGTGTGATGTATCAGCACAGGCTTTGAGACGTCTGGACCCTGTCCTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp AAAACCAGCCAACCAGGCTGGGGTGGCCACTCAAGGGAGAGGGTTTGGGCCTTCGATTCCTGCCGCTCCTaGTCCAGACCCACCCCACGT +
Preference number: 5 (lower is better)
Translates to: KTSQPGWGGHSRERVWAFDSCRS*SRPTPR
Trigger: ACGTGGGGTGGGTCTGGACAAGGAGCGGCAGGAATC...GAAGGCCCAAACCCTCTCCCTTGAGTGGCCACCCCAGCCTGGTTGGCTGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS GCA 90 bp GGTGATTCAGAACTTCCCACTGCGGTCTCGGAAGAAGCCCTCAGCTaGCTGGGCCTCGCGGAAGGTGACGGTGATGGAGTTGGCGGTGAT +
Preference number: 5 (lower is better)
Translates to: GDSELPTAVSEEALS*LGLAEGDGDGVGGD
Trigger: ATCACCGCCAACTCCATCACCGTCACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTTCTTCCGAGACCGCAGTGGGAAGTTCTGAATCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000401405.7
ENST00000490741.1
CDS CCA 90 bp ATTCAGAACTTCCCACTGCGGTCTCGGAAGAAGCCCTCAGCTGCCTaGGCCTCGCGGAAGGTGACGGTGATGGAGTTGGCGGTGATGTCG +
Preference number: 5 (lower is better)
Translates to: IQNFPLRSRKKPSAA*ASRKVTVMELAVMS
Trigger: CGACATCACCGCCAACTCCATCACCGTCACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTTCTTCCGAGACCGCAGTGGGAAGTTCTGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000401405.7
ENST00000490741.1
CDS CCA 90 bp GAGGTGGGGATGGTTAGCAGCCATACCTGCCTCACTCCCAGACCGTaGTGGCACTGTGGATGGCATGAAGTGGGCACCACAGTGCATGGG +
Preference number: 5 (lower is better)
Translates to: EVGMVSSHTCLTPRP*WHCGWHEVGTTVHG
Trigger: CCCATGCACTGTGGTGCCCACTTCATGCCATCCACAGTGCCACCACGGTCTGGGAGTGAGGCAGGTATGGCTGCTAACCATCCCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp TCAGGGATCTGGGAAGCCTGTCAACAGAGCACCCCATGCAGAAAGGGCTGCAGGGAGAGCCGCAGGTACTaGTGGGCCTTTCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SGIWEACQQSTPCRKGCRESRRY*WAFRGL
Trigger: CAAGCCCCGAAAGGCCCACAAGTACCTGCGGCTCTC...CCTGCAGCCCTTTCTGCATGGGGTGCTCTGTTGACAGGCTTCCCAGATCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS GCA 90 bp TCACCAGATACTCGACTTTACCCTTCCGCACGCGCTTCTTCCGGATaGTCTCCACGGCGAACACCTGCTCGCCGATGGCTGACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SPDTRLYPSARASSG*SPRRTPARRWLTAP
Trigger: TGGAGCTGTCAGCCATCGGCGAGCAGGTGTTCGCCGTGGAGAGCATCCGGAAGAAGCGCGTGCGGAAGGGTAAAGTCGAGTATCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216133.10
ENST00000401405.7
ENST00000434260.1
ENST00000477827.1
ENST00000482294.1
CDS CCA 90 bp GTGGGGATGGTTAGCAGCCATACCTGCCTCACTCCCAGACCGTGGTaGCACTGTGGATGGCATGAAGTGGGCACCACAGTGCATGGGGTT +
Preference number: 5 (lower is better)
Translates to: VGMVSSHTCLTPRPW*HCGWHEVGTTVHGV
Trigger: AACCCCATGCACTGTGGTGCCCACTTCATGCCATCCACAGTGCCACCACGGTCTGGGAGTGAGGCAGGTATGGCTGCTAACCATCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp GCTGGCCGCACTCCACTCTTGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAATCACGGTCACCTCACTaGAGGGGAGCGCAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: AGRTPLLVCVTLTLTAKESRSPH*RGAQVS
Trigger: GGACACCTGCGCTCCCCTCAAGTGAGGTGACCGTGA...TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGCCTGGGTTGGCTGAGTaGGAGGGGAGGGCAGAAAAA +
Preference number: 5 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQPGLAE*EGRAEK
Trigger: TTTTTCTGCCCTCCCCTCCAACTCAGCCAACCCAGG...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp ACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGGGGCAGGTCTCAAACTaGCTGGCCGCACTCCACTCT +
Preference number: 5 (lower is better)
Translates to: TLSKGMCLESTRAPDPSQGQVSN*LAALHS
Trigger: AGAGTGGAGTGCGGCCAGCAAGTTTGAGACCTGCCC...CTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp GCTGGCCGCACTCCACTCTTGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAAGGGGACAGGAGGAGCTaGGCAACGAGGTCATCACCC +
Preference number: 5 (lower is better)
Translates to: AGRTPLLVCVTLTLTAKEGDRRS*ATRSSP
Trigger: GGGTGATGACCTCGTTGCCAAGCTCCTCCTGTCCCC...TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS GCA 90 bp GAGGGCCTCTGCTCTGGGAGCCTCGTTCCTTCCCTCCTGACGAGCTaGAGTGGGCAGATGGATTCACATCCAGGATCAATCAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: EGLCSGSLVPSLLTS*SGQMDSHPGSIKVG
Trigger: CCCCACTTTGATTGATCCTGGATGTGAATCCATCTGCCCACTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCAGAGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS GCA 90 bp CCTCTGTTTCCCCCAAGTGAGGTGGGGATGGTTAGCAGCCATACCTaGCTCACTCCCAGACCGTGGTGGCACTGTGGATGGCATGAAGTG +
Preference number: 5 (lower is better)
Translates to: PLFPPSEVGMVSSHT*LTPRPWWHCGWHEV
Trigger: CACTTCATGCCATCCACAGTGCCACCACGGTCTGGGAGTGAGGCAGGTATGGCTGCTAACCATCCCCACCTCACTTGGGGGAAACAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp GCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTTTTCGGGGCGGGAACTTCTaGCGCGAGAGCCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: AGGGRVVGSSPLLLLGIFRGGNF*RESRRY
Trigger: GTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCG...AAAAATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp CTCTCCATCCCCAGCCTGAGGCCTCGTGGTAAACGTCCCTCAGAGAAAGGGCAGAGCAAAGGCATGTGCTaGGAATCAACTCGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: LSIPSLRPRGKRPSEKGQSKGMC*ESTRAP
Trigger: GGGGGCACGAGTTGATTCCAAGCACATGCCTTTGCT...CTGCCCTTTCTCTGAGGGACGTTTACCACGAGGCCTCAGGCTGGGGATGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS TCA 90 bp GAAGCATCGAGGGCCTCTGCTCTGGGAGCCTCGTTCCTTCCCTCCTaGCGAGCTGCAGTGGGCAGATGGATTCACATCCAGGATCAATCA +
Preference number: 5 (lower is better)
Translates to: EASRASALGASFLPS*RAAVGRWIHIQDQS
Trigger: TGATTGATCCTGGATGTGAATCCATCTGCCCACTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCAGAGGCCCTCGATGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 90 bp CCTCTGCTCTGGGAGCCTCGTTCCTTCCCTCCTGACGAGCTGCAGTaGGCAGATGGATTCACATCCAGGATCAATCAAAGTGGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: PLLWEPRSFPPDELQ*ADGFTSRINQSGGR
Trigger: CCTTCCCCCACTTTGATTGATCCTGGATGTGAATCCATCTGCCCACTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp GCTGGCCGCACTCCACTCTTGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAATGCAGCAGAAGCCGCTaGGGTTTCGGACCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: AGRTPLLVCVTLTLTAKECSRSR*GFGPLF
Trigger: GAAGAGAGGTCCGAAACCCAAGCGGCTTCTGCTGCA...TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp GCTGGCCGCACTCCACTCTTGGTGTGTGTTACCCTGACTCTGACAGCCAAGGAAGGCTGCAGGCTGTCTTaGGTTTGGGAACCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: AGRTPLLVCVTLTLTAKEGCRLS*VWEPGK
Trigger: CTTCCCTGGTTCCCAAACCAAAGACAGCCTGCAGCC...TTCCTTGGCTGTCAGAGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS TCA 90 bp GGAGGGATTCTCCTTCAGCCCTCAGAATATTCGGGAAGGGAGAACTaGAGTGGGGGTTGGTGTGAGGGGTGGAGTGTATTCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GGILLQPSEYSGREN*SGGWCEGWSVFSAC
Trigger: GCAGGCCGAGAATACACTCCACCCCTCACACCAACCCCCACTTCAGTTCTCCCTTCCCGAATATTCTGAGGGCTGAAGGAGAATCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 90 bp AGAGGAGGAAAAATAGCCAATAGTGTCCTGAAGGCTAACAGCTGGTaGCCACAGCTTCCTGGTGCGAAGCGAGAGAGGCAGGGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: RGGKIANSVLKANSW*PQLPGAKRERQGCA
Trigger: CGCACACCCCTGCCTCTCTCGCTTCGCACCAGGAAGCTGTGGCCACCAGCTGTTAGCCTTCAGGACACTATTGGCTATTTTTCCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTCCCACGTGCTGTACTTaGGGGGCCATCCTTTCCACT +
Preference number: 5 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGIPTCCT*GAILST
Trigger: AGTGGAAAGGATGGCCCCCAAAGTACAGCACGTGGG...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CAA 90 bp AGGGCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTTGCAGCAGAAGCCGCTaGGGTTTCGGACCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RAGGGRVVGSSPLLLLGICSRSR*GFGPLF
Trigger: GAAGAGAGGTCCGAAACCCAAGCGGCTTCTGCTGCA...AATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS-3UTR CAA 90 bp GCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTTTTTCACGGTCACCTCACTaGAGGGGAGCGCAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: AGGGRVVGSSPLLLLGIFSRSPH*RGAQVS
Trigger: GGACACCTGCGCTCCCCTCAAGTGAGGTGACCGTGA...AAAAATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS CCA 90 bp TCCAGAGGAGGAAAAATAGCCAATAGTGTCCTGAAGGCTAACAGCTaGTGGCCACAGCTTCCTGGTGCGAAGCGAGAGAGGCAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: SRGGKIANSVLKANS*WPQLPGAKRERQGC
Trigger: ACACCCCTGCCTCTCTCGCTTCGCACCAGGAAGCTGTGGCCACCAGCTGTTAGCCTTCAGGACACTATTGGCTATTTTTCCTCCTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACACCCACGTGCTGTACTTaGGGGGCCATCCTTTCCACT +
Preference number: 5 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTPTCCT*GAILST
Trigger: AGTGGAAAGGATGGCCCCCAAAGTACAGCACGTGGG...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp TGGCCGCAGCTGGCCACTTCGAAAGCAAAAGCTAAACCACCTCACAGAAGCACAGGCCGCACTCCACTCTaGGTGTGTGTTACCCTGACT +
Preference number: 5 (lower is better)
Translates to: WPQLATSKAKAKPPHRSTGRTPL*VCVTLT
Trigger: AGTCAGGGTAACACACACCAAGAGTGGAGTGCGGCC...TGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGAAGTGGCCAGCTGCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCAAGCAGAGCTTCTCCTaGCCCTTGGCCTTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVKQSFS*PLALWE
Trigger: CTCCCACAAGGCCAAGGGCAAGGAGAAGCTCTGCTT...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp AGGGCTGAAAAGTCACCTGAGTCAGAAAGAACAAGAACCCCTCACGGGAGGAAGCCGCCCCACTCACTTTaGGTCAAAACCAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RAEKSPESERTRTPHGRKPPHSL*VKTSLH
Trigger: GTGGAGGCTGGTTTTGACCAAAAGTGAGTGGGGCGG...CTTCCTCCCGTGAGGGGTTCTTGTTCTTTCTGACTCAGGTGACTTTTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp TGTGCTTGGAATCAACTCGTGCCCCCGACCCCTCCCAGATACATTCATTTAGTCCTCAAGGGAGAGGGTTaGGGCCTTCCAATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: CAWNQLVPPTPPRYIHLVLKGEG*GLPMLL
Trigger: AAGGAGCATTGGAAGGCCCAAACCCTCTCCCTTGAG...GACTAAATGAATGTATCTGGGAGGGGTCGGGGGCACGAGTTGATTCCAAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp AGGGCTGAAAAGTCACCTGAGTCAGAAAGAACAAGAACCCCTCACGGGAGGAAGCAGGCTGTCTTTGGTTaGGGAACCAGGGAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RAEKSPESERTRTPHGRKQAVFG*GTREEG
Trigger: CCCTTCTTCCCTGGTTCCCAAACCAAAGACAGCCTG...CTTCCTCCCGTGAGGGGTTCTTGTTCTTTCTGACTCAGGTGACTTTTCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS CCA 90 bp ATCACACCTACCTTACAAAGCTGTATGGGAACCTGCTCTATAGACTaGAAAGTGCCGTCTAGAGGTGAGGGGGATTCAGGCTCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: ITPTLQSCMGTCSID*KVPSRGEGDSGSAP
Trigger: AGGGGCAGAGCCTGAATCCCCCTCACCTCTAGACGGCACTTTCCAGTCTATAGAGCAGGTTCCCATACAGCTTTGTAAGGTAGGTGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS-3UTR CAA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCGCCGACGTTCCATTTTaGAACCTGCGCAACGTTTTC +
Preference number: 5 (lower is better)
Translates to: SPSTHTLSKGMCLESTRAADVPF*NLRNVF
Trigger: GAAAACGTTGCGCAGGTTCAAAAATGGAACGTCGGC...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp GCAGGTGGTGGGAGAGTAGTGGGATCTTCTCCCCTTTTGCTGCTCGGTATTTTTGGCCCCCAGGACACCTaGTACAAACCAGAAAACAAG +
Preference number: 5 (lower is better)
Translates to: AGGGRVVGSSPLLLLGIFGPQDT*YKPENK
Trigger: CTTGTTTTCTGGTTTGTACAAGGTGTCCTGGGGGCC...AAAAATACCGAGCAGCAAAAGGGGAGAAGATCCCACTACTCTCCCACCACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAATCCTTGCCCTTGGCCTaGTGGGAGCTCCGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QIHSFSLNKARSSFCAKESLPLA*WELRRS
Trigger: GGACCTGCGGAGCTCCCACAAGGCCAAGGGCAAGGA...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp TCTCCCAGCACACACACACTCAGCAAAGGCATGTGCTTGGAATCAACTCGTGCCTGCGCAAATAGTTCTTaGAAAGTGACCAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SPSTHTLSKGMCLESTRACANSS*KVTRKQ
Trigger: CTGCTTCCTGGTCACTTTCAAAGAACTATTTGCGCA...GGCACGAGTTGATTCCAAGCACATGCCTTTGCTGAGTGTGTGTGTGCTGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS-3UTR CAA 90 bp CAGATACATTCATTTAGTCTGAACAAAGCTCGAAGCTCATTCTGTGCAAAGGAAAAGGTAAAGACCCAATaGAAACAAGAGAAAAGGGGA +
Preference number: 5 (lower is better)
Translates to: QIHSFSLNKARSSFCAKEKVKTQ*KQEKRG
Trigger: TCCCCTTTTCTCTTGTTTCAATTGGGTCTTTACCTT...TTCCTTTGCACAGAATGAGCTTCGAGCTTTGTTCAGACTAAATGAATGTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216133.10
CDS GCA 72 bp GGGGGCTGCGCAGCAGGCTCCCACTCGCCAGCCGCCTaGAGGACGTCTGGGGCCGGTGGCTCCTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GGCAAGSHSPAA*RTSGAGGSCRK
Trigger: CTTCCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGAGCCTGCTGCGCAGCCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS GCA 72 bp GGGGGCTGCGCAGCAGGCTCCCACTCGCCAGCCGCCTaGAGGACGTCTGGGGCCGGTGGCTCCTGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: GGCAAGSHSPAA*RTSGAGGSCSR
Trigger: TCTGCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGAGCCTGCTGCGCAGCCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401405.7
CDS CCA 72 bp GGGGCCGGTGGCTCCTGCAGGAAGAGCTCCCGTCGATaGCTGTGGCTCTCCAGGTTGGGCCCGCGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: GAGGSCRKSSRR*LWLSRLGPRGG
Trigger: CCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CCA 72 bp AGCAGGCTCCCACTCGCCAGCCGCCTGCAGGACGTCTaGGGCCGGTGGCTCCTGCAGGAAGAGCTCCCGTCG +
Preference number: 6 (lower is better)
Translates to: SRLPLASRLQDV*GRWLLQEELPS
Trigger: CGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGAGCCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CCA 72 bp AGCAGGCTCCCACTCGCCAGCCGCCTGCAGGACGTCTaGGGCCGGTGGCTCCTGCAGCAGAAGCCGCTTGGG +
Preference number: 6 (lower is better)
Translates to: SRLPLASRLQDV*GRWLLQQKPLG
Trigger: CCCAAGCGGCTTCTGCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGGCGAGTGGGAGCCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401405.7
CDS CAA 72 bp CGGAGCGGGAAGGGCAGGGTGGGCACCAAGGGGCCCTaGTCCACCAGCTCAGGTGCCCCCGCCTTGACCACC +
Preference number: 6 (lower is better)
Translates to: RSGKGRVGTKGP*STSSGAPALTT
Trigger: GGTGGTCAAGGCGGGGGCACCTGAGCTGGTGGACAAGGGCCCCTTGGTGCCCACCCTGCCCTTCCCGCTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000434260.1
ENST00000490741.1
CDS GCA 72 bp CCAGCCGCCTGCAGGACGTCTGGGGCCGGTGGCTCCTaGAGGAAGAGCTCCCGTCGATGGCTGTGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: PAACRTSGAGGS*RKSSRRWLWLS
Trigger: GGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCCACCGGCCCCAGACGTCCTGCAGGCGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CAA 72 bp CGCGAGAGCCGCAGGTACTTGTGGGCCTTTCGGGGCTaGCGGAGCGGGAAGGGCAGGGTGGGCACCAAGGGG +
Preference number: 6 (lower is better)
Translates to: RESRRYLWAFRG*RSGKGRVGTKG
Trigger: CCCCTTGGTGCCCACCCTGCCCTTCCCGCTCCGCAAGCCCCGAAAGGCCCACAAGTACCTGCGGCTCTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CAA 90 bp CGATGGCTGTGGCTCTCCAGGTTGGGCCCGCGGGGCGGGAACTTCTaGCGCGAGAGCCGCAGGTACTTGTGGGCCTTTCGGGGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: RWLWLSRLGPRGGNF*RESRRYLWAFRGLR
Trigger: CCGCAAGCCCCGAAAGGCCCACAAGTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CAA 90 bp GGCTCCTGCAGGAAGAGCTCCCGTCGATGGCTGTGGCTCTCCAGGTaGGGCCCGCGGGGCGGGAACTTCTTGCGCGAGAGCCGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: GSCRKSSRRWLWLSR*GPRGGNFLRESRRY
Trigger: GTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS GCA 72 bp GGCTCTCCAGGTTGGGCCCGCGGGGCGGGAACTTCTTaGGCGAGAGCCGCAGGTACTTGTGGGCCTTTCGGG +
Preference number: 6 (lower is better)
Translates to: GSPGWARGAGTS*ARAAGTCGPFG
Trigger: CCCGAAAGGCCCACAAGTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS GCA 72 bp AGACCCAGCCATGGTGGGGCCCTGTCCCAGGGCTCATaGCTGTCGGGTGGGCAGCCAGGCCTAGAACCCAGG +
Preference number: 6 (lower is better)
Translates to: RPSHGGALSQGS*LSGGQPGLEPR
Trigger: CCTGGGTTCTAGGCCTGGCTGCCCACCCGACAGGCATGAGCCCTGGGACAGGGCCCCACCATGGCTGGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS GCA 72 bp CCTTGCCCTTGGCCTTGTGGGAGCTCCGCAGGTCCATaGTGTACAGCCGCTGCGGGGGCAAGCCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: PCPWPCGSSAGP*CTAAAGASQGS
Trigger: GCTGCCCTGGCTTGCCCCCGCAGCGGCTGTACAGCATGGACCTGCGGAGCTCCCACAAGGCCAAGGGCAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490741.1
CDS CCA 72 bp GGAAGAGCTCCCGTCGATGGCTGTGGCTCTCCAGGTTaGGCCCGCGGGGCGGGAACTTCTTGCGCGAGAGCC +
Preference number: 6 (lower is better)
Translates to: GRAPVDGCGSPG*ARGAGTSCARA
Trigger: GGCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CCA 72 bp GGTGGCTCCTGCAGGAAGAGCTCCCGTCGATGGCTGTaGCTCTCCAGGTTGGGCCCGCGGGGCGGGAACTTC +
Preference number: 6 (lower is better)
Translates to: GGSCRKSSRRWL*LSRLGPRGGNF
Trigger: GAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCTGCAGGAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CAA 72 bp CGGGGCGGGAACTTCTTGCGCGAGAGCCGCAGGTACTaGTGGGCCTTTCGGGGCTTGCGGAGCGGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RGGNFLRESRRY*WAFRGLRSGKG
Trigger: GCCCTTCCCGCTCCGCAAGCCCCGAAAGGCCCACAAGTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CCA 72 bp CGCCTTGACCACCCCCTCAGGGCTCCCGCTGCCGAGTaGGCACGTCAGGGAGAAGCAGAGCTTCTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: RLDHPLRAPAAE*ARQGEAELLLA
Trigger: GGCAAGGAGAAGCTCTGCTTCTCCCTGACGTGCCCACTCGGCAGCGGGAGCCCTGAGGGGGTGGTCAAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000434260.1
ENST00000490741.1
CDS CCA 72 bp GCGCGCCCAGGGAGGCGGTGCTCCTGCTGCCCACTCTaGGCATCGTCACTCCCTTTACTGCCCCCTTCACTC +
Preference number: 6 (lower is better)
Translates to: ARPGRRCSCCPL*ASSLPLLPPSL
Trigger: GAGTGAAGGGGGCAGTAAAGGGAGTGACGATGCCCAGAGTGGGCAGCAGGAGCACCGCCTCCCTGGGCGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CAA 72 bp TGGCTCTCCAGGTTGGGCCCGCGGGGCGGGAACTTCTaGCGCGAGAGCCGCAGGTACTTGTGGGCCTTTCGG +
Preference number: 6 (lower is better)
Translates to: WLSRLGPRGGNF*RESRRYLWAFR
Trigger: CCGAAAGGCCCACAAGTACCTGCGGCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CAA 72 bp AGGAAGAGCTCCCGTCGATGGCTGTGGCTCTCCAGGTaGGGCCCGCGGGGCGGGAACTTCTTGCGCGAGAGC +
Preference number: 6 (lower is better)
Translates to: RKSSRRWLWLSR*GPRGGNFLRES
Trigger: GCTCTCGCGCAAGAAGTTCCCGCCCCGCGGGCCCAACCTGGAGAGCCACAGCCATCGACGGGAGCTCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CAA 90 bp AACTTCTTGCGCGAGAGCCGCAGGTACTTGTGGGCCTTTCGGGGCTaGCGGAGCGGGAAGGGCAGGGTGGGCACCAAGGGGCCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: NFLRESRRYLWAFRG*RSGKGRVGTKGPLS
Trigger: GGACAAGGGCCCCTTGGTGCCCACCCTGCCCTTCCCGCTCCGCAAGCCCCGAAAGGCCCACAAGTACCTGCGGCTCTCGCGCAAGAAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000490741.1
CDS CCA 72 bp TGGTGGGGCCCTGTCCCAGGGCTCATGCCTGTCGGGTaGGCAGCCAGGCCTAGAACCCAGGACCAAAGTGGA +
Preference number: 6 (lower is better)
Translates to: WWGPVPGLMPVG*AARPRTQDQSG
Trigger: TCCACTTTGGTCCTGGGTTCTAGGCCTGGCTGCCCACCCGACAGGCATGAGCCCTGGGACAGGGCCCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp TTCCCACTGCGGTCTCGGAAGAAGCCCTCAGCTGCCTaGGCCTCGCGGAAGGTGACGGTGATGGAGTTGGCG +
Preference number: 6 (lower is better)
Translates to: FPLRSRKKPSAA*ASRKVTVMELA
Trigger: CGCCAACTCCATCACCGTCACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTTCTTCCGAGACCGCAGTGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000401405.7
ENST00000490741.1
CDS CAA 90 bp CTGCCGAGTGGGCACGTCAGGGAGAAGCAGAGCTTCTCCTTGCCCTaGGCCTTGTGGGAGCTCCGCAGGTCCATGCTGTACAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LPSGHVREKQSFSLP*ALWELRRSMLYSRC
Trigger: GCAGCGGCTGTACAGCATGGACCTGCGGAGCTCCCACAAGGCCAAGGGCAAGGAGAAGCTCTGCTTCTCCCTGACGTGCCCACTCGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000434260.1
ENST00000490741.1
CDS CAA 90 bp AAGCCCTCAGCTGCCTGGGCCTCGCGGAAGGTGACGGTGATGGAGTaGGCGGTGATGTCGGTCACGGTCACCTCACTTGAGGGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: KPSAAWASRKVTVME*AVMSVTVTSLEGSA
Trigger: TGCGCTCCCCTCAAGTGAGGTGACCGTGACCGACATCACCGCCAACTCCATCACCGTCACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000401405.7
ENST00000490741.1
CDS GCA 72 bp CCTTGCCCTTGGCCTTGTGGGAGCTCCGCAGGTCCATaGTGTACAGCCGCTGCAGCAGAAGCCGCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: PCPWPCGSSAGP*CTAAAAEAAWV
Trigger: AACCCAAGCGGCTTCTGCTGCAGCGGCTGTACAGCATGGACCTGCGGAGCTCCCACAAGGCCAAGGGCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000434260.1
CDS GCA 72 bp CGAGTGGGCACGTCAGGGAGAAGCAGAGCTTCTCCTTaGCCTTGGCCTTGTGGGAGCTCCGCAGGTCCATGC +
Preference number: 6 (lower is better)
Translates to: RVGTSGRSRASP*PWPCGSSAGPC
Trigger: GCATGGACCTGCGGAGCTCCCACAAGGCCAAGGGCAAGGAGAAGCTCTGCTTCTCCCTGACGTGCCCACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000434260.1
ENST00000490741.1
CDS GCA 72 bp CTAGGGGCACAGCGCAACAGAAGCATCGAGGGCCTCTaGTCTGGGAGCCTCGTTCCTTCCCTCCTGACGAGC +
Preference number: 6 (lower is better)
Translates to: LGAQRNRSIEGL*SGSLVPSLLTS
Trigger: GCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCAGAGGCCCTCGATGCTTCTGTTGCGCTGTGCCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp GGCACAGCGCAACAGAAGCATCGAGGGCCTCTGCTCTaGGAGCCTCGTTCCTTCCCTCCTGACGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GTAQQKHRGPLL*EPRSFPPDELQ
Trigger: CTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCAGAGGCCCTCGATGCTTCTGTTGCGCTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS TCA 72 bp CGGTGCCGAGGACACCGTACTTCTCCTCGTAGGCCATaGCGAGGCGGGGGTCCAAGATGTGCTCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: RCRGHRTSPRRP*RGGGPRCALLA
Trigger: AGCCAGAAGAGCACATCTTGGACCCCCGCCTCGTCATGGCCTACGAGGAGAAGTACGGTGTCCTCGGCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477827.1
CDS GCA 72 bp ACTCGACTTTACCCTTCCGCACGCGCTTCTTCCGGATaGTCTCCACGGCGAACACCTGCTCGCCGATGGCTG +
Preference number: 6 (lower is better)
Translates to: TRLYPSARASSG*SPRRTPARRWL
Trigger: CAGCCATCGGCGAGCAGGTGTTCGCCGTGGAGAGCATCCGGAAGAAGCGCGTGCGGAAGGGTAAAGTCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216133.10
ENST00000401405.7
ENST00000434260.1
ENST00000477827.1
ENST00000482294.1
CDS GCA 72 bp GAACTTCCCACTGCGGTCTCGGAAGAAGCCCTCAGCTaGCTGGGCCTCGCGGAAGGTGACGGTGATGGAGTT +
Preference number: 6 (lower is better)
Translates to: ELPTAVSEEALS*LGLAEGDGDGV
Trigger: AACTCCATCACCGTCACCTTCCGCGAGGCCCAGGCAGCTGAGGGCTTCTTCCGAGACCGCAGTGGGAAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216133.10
ENST00000401405.7
ENST00000490741.1
CDS GCA 72 bp CCCCCAAGTGAGGTGGGGATGGTTAGCAGCCATACCTaGCTCACTCCCAGACCGTGGTGGCACTGTGGATGG +
Preference number: 6 (lower is better)
Translates to: PPSEVGMVSSHT*LTPRPWWHCGW
Trigger: CCATCCACAGTGCCACCACGGTCTGGGAGTGAGGCAGGTATGGCTGCTAACCATCCCCACCTCACTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp CTCATTCCCTCCCAACAACTCCCTGCTGGAGGGCATTaGTGGGTTCCTGATGGGGCCTCAGCAGGAGAGGTG +
Preference number: 6 (lower is better)
Translates to: LIPSQQLPAGGH*WVPDGASAGEV
Trigger: CACCTCTCCTGCTGAGGCCCCATCAGGAACCCACCAATGCCCTCCAGCAGGGAGTTGTTGGGAGGGAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS TCA 72 bp ATGCTCGGTCTCTCTCCTCCTTCTCCTCGTAGGCCATaGCGAGGCGGGGGTCCAAGATGTGCTCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: MLGLSPPSPRRP*RGGGPRCALLA
Trigger: AGCCAGAAGAGCACATCTTGGACCCCCGCCTCGTCATGGCCTACGAGGAGAAGGAGGAGAGAGACCGAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000401405.7
CDS TCA 72 bp CCTCACTCCCAGACCGTGGTGGCACTGTGGATGGCATaGAGTGGGCACCACAGTGCATGGGGTTGGCAGTTA +
Preference number: 6 (lower is better)
Translates to: PHSQTVVALWMA*SGHHSAWGWQL
Trigger: TAACTGCCAACCCCATGCACTGTGGTGCCCACTTCATGCCATCCACAGTGCCACCACGGTCTGGGAGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp GGTCCATGCTGTACAGCCGCTGCAGCAGAAGCCGCTTaGGTTTCGGACCTCTCTTCCTATACCCCGATGCTC +
Preference number: 6 (lower is better)
Translates to: GPCCTAAAAEAA*VSDLSSYTPML
Trigger: GAGCATCGGGGTATAGGAAGAGAGGTCCGAAACCCAAGCGGCTTCTGCTGCAGCGGCTGTACAGCATGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000434260.1
CDS CCA 72 bp GTTAGCAGCCATACCTGCCTCACTCCCAGACCGTGGTaGCACTGTGGATGGCATGAAGTGGGCACCACAGTG +
Preference number: 6 (lower is better)
Translates to: VSSHTCLTPRPW*HCGWHEVGTTV
Trigger: CACTGTGGTGCCCACTTCATGCCATCCACAGTGCCACCACGGTCTGGGAGTGAGGCAGGTATGGCTGCTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS TCA 72 bp GAAGAATGTAAGTCTCCCCACCTACAGGGCAGATGCTaGGCAGGAGAATCACTACCCCACCCAGGCCGGCAC +
Preference number: 6 (lower is better)
Translates to: EECKSPHLQGRC*AGESLPHPGRH
Trigger: GTGCCGGCCTGGGTGGGGTAGTGATTCTCCTGCTCAGCATCTGCCCTGTAGGTGGGGAGACTTACATTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS GCA 72 bp CCGCTTGGGTTTCGGACCTCTCTTCCTATACCCCGATaGTCGGTCTCTCTCCTCCTTTGGGGGCCATCCTTT +
Preference number: 6 (lower is better)
Translates to: PLGFRTSLPIPR*SVSLLLWGPSF
Trigger: AAAGGATGGCCCCCAAAGGAGGAGAGAGACCGAGCATCGGGGTATAGGAAGAGAGGTCCGAAACCCAAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434260.1
CDS CCA 72 bp ATGGTTAGCAGCCATACCTGCCTCACTCCCAGACCGTaGTGGCACTGTGGATGGCATGAAGTGGGCACCACA +
Preference number: 6 (lower is better)
Translates to: MVSSHTCLTPRP*WHCGWHEVGTT
Trigger: TGTGGTGCCCACTTCATGCCATCCACAGTGCCACCACGGTCTGGGAGTGAGGCAGGTATGGCTGCTAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CAA 72 bp AGGTCCATGCTGTACAGCCGCTGCAGCAGAAGCCGCTaGGGTTTCGGACCTCTCTTCCTATACCCCGATGCT +
Preference number: 6 (lower is better)
Translates to: RSMLYSRCSRSR*GFGPLFLYPDA
Trigger: AGCATCGGGGTATAGGAAGAGAGGTCCGAAACCCAAGCGGCTTCTGCTGCAGCGGCTGTACAGCATGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216133.10
ENST00000434260.1
CDS GCA 72 bp TGCTCTGGGAGCCTCGTTCCTTCCCTCCTGACGAGCTaGAGTGGGCAGATGGATTCACATCCAGGATCAATC +
Preference number: 6 (lower is better)
Translates to: CSGSLVPSLLTS*SGQMDSHPGSI
Trigger: GATTGATCCTGGATGTGAATCCATCTGCCCACTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp CTCCCAGACCGTGGTGGCACTGTGGATGGCATGAAGTaGGCACCACAGTGCATGGGGTTGGCAGTTATATTT +
Preference number: 6 (lower is better)
Translates to: LPDRGGTVDGMK*APQCMGLAVIF
Trigger: AAATATAACTGCCAACCCCATGCACTGTGGTGCCCACTTCATGCCATCCACAGTGCCACCACGGTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp AAAATAGCCAATAGTGTCCTGAAGGCTAACAGCTGGTaGCCACAGCTTCCTGGTGCGAAGCGAGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: KIANSVLKANSW*PQLPGAKRERQ
Trigger: CTGCCTCTCTCGCTTCGCACCAGGAAGCTGTGGCCACCAGCTGTTAGCCTTCAGGACACTATTGGCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp GGAAAAATAGCCAATAGTGTCCTGAAGGCTAACAGCTaGTGGCCACAGCTTCCTGGTGCGAAGCGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GKIANSVLKANS*WPQLPGAKRER
Trigger: CCTCTCTCGCTTCGCACCAGGAAGCTGTGGCCACCAGCTGTTAGCCTTCAGGACACTATTGGCTATTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp TGGGAGCCTCGTTCCTTCCCTCCTGACGAGCTGCAGTaGGCAGATGGATTCACATCCAGGATCAATCAAAGT +
Preference number: 6 (lower is better)
Translates to: WEPRSFPPDELQ*ADGFTSRINQS
Trigger: ACTTTGATTGATCCTGGATGTGAATCCATCTGCCCACTGCAGCTCGTCAGGAGGGAAGGAACGAGGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS CCA 72 bp ACCTTACAAAGCTGTATGGGAACCTGCTCTATAGACTaGAAAGTGCCGTCTAGAGGTGAGGGGGATTCAGGC +
Preference number: 6 (lower is better)
Translates to: TLQSCMGTCSID*KVPSRGEGDSG
Trigger: GCCTGAATCCCCCTCACCTCTAGACGGCACTTTCCAGTCTATAGAGCAGGTTCCCATACAGCTTTGTAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482294.1
CDS GCA 72 bp CTGATCACACCTACCTTACAAAGCTGTATGGGAACCTaGTCTATAGACTGGAAAGTGCCGTCTAGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: LITPTLQSCMGT*SIDWKVPSRGE
Trigger: CTCACCTCTAGACGGCACTTTCCAGTCTATAGAGCAGGTTCCCATACAGCTTTGTAAGGTAGGTGTGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482294.1