RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBX6 (Homo sapiens)

Ensembl gene IDs: ENSG00000183741

Ensembl transcript IDs: ENST00000216083.6, ENST00000407418.8, ENST00000469420.1

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCCTGGCCAACCCAGCTCCCTGTTGGGGCTGACCCTCCAGCCTTaGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACCTCCTGGCTC +
Preference number: 1 (lower is better)
Translates to: PPGQPSSLLGLTLQP*AGPPAWLSSRTSWL
Trigger: GAGCCAGGAGGTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCCAACAGGGAGCTGGGTTGGCCAGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp GGAAGCCAGCTCCAGCCACGCCTGGAACACGCCACCCACGCACAATaGAGACCCGGGAAGTGGCCCAGGGCTGGCCAGCGGGGCCCCGGT +
Preference number: 1 (lower is better)
Translates to: GSQLQPRLEHATHAQ*RPGKWPRAGQRGPG
Trigger: ACCGGGGCCCCGCTGGCCAGCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGTGGCTGGAGCTGGCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR GCA 90 bp CGGGTGTGGAGATCTGGGTCCAGGCCCTCTCCACAGTGCCTGCGATaGCAGGGGACCTGCCAGCTGGGCCCAGGCCTCCGCCCCATCCTG +
Preference number: 1 (lower is better)
Translates to: RVWRSGSRPSPQCLR*QGTCQLGPGLRPIL
Trigger: CAGGATGGGGCGGAGGCCTGGGCCCAGCTGGCAGGTCCCCTGGCATCGCAGGCACTGTGGAGAGGGCCTGGACCCAGATCTCCACACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp AAGCACGGGTGTGGAGATCTGGGTCCAGGCCCTCTCCACAGTGCCTaGGATGCCAGGGGACCTGCCAGCTGGGCCCAGGCCTCCGCCCCA +
Preference number: 1 (lower is better)
Translates to: KHGCGDLGPGPLHSA*DARGPASWAQASAP
Trigger: TGGGGCGGAGGCCTGGGCCCAGCTGGCAGGTCCCCTGGCATCGCAGGCACTGTGGAGAGGGCCTGGACCCAGATCTCCACACCCGTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp GAGCAAGCACGGGTGTGGAGATCTGGGTCCAGGCCCTCTCCACAGTaGCTGCGATGCCAGGGGACCTGCCAGCTGGGCCCAGGCCTCCGC +
Preference number: 1 (lower is better)
Translates to: EQARVWRSGSRPSPQ*LRCQGTCQLGPGLR
Trigger: GCGGAGGCCTGGGCCCAGCTGGCAGGTCCCCTGGCATCGCAGGCACTGTGGAGAGGGCCTGGACCCAGATCTCCACACCCGTGCTTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp TCTGGGTCCAGGCCCTCTCCACAGTGCCTGCGATGCCAGGGGACCTaGCAGCTGGGCCCAGGCCTCCGCCCCATCCTGACATTGCCACCT +
Preference number: 1 (lower is better)
Translates to: SGSRPSPQCLRCQGT*QLGPGLRPILTLPP
Trigger: AGGTGGCAATGTCAGGATGGGGCGGAGGCCTGGGCCCAGCTGGCAGGTCCCCTGGCATCGCAGGCACTGTGGAGAGGGCCTGGACCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp ACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCTaGCCAGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCAT +
Preference number: 1 (lower is better)
Translates to: TRHPRTMETREVAQG*PAGPRSQFWDQHPH
Trigger: ATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCTGGCCAGCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR GCA 90 bp GGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTaGTCCACTTGGAGCTCAGGCCAGCAGAAGCAGACCACCTGTGGC +
Preference number: 1 (lower is better)
Translates to: GGVPGASSCTKAGPG*STWSSGQQKQTTCG
Trigger: GCCACAGGTGGTCTGCTTCTGCTGGCCTGAGCTCCAAGTGGAGCAGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp GCTCCACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTaGCCACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAG +
Preference number: 1 (lower is better)
Translates to: APLTLGPIHSGPHGH*PPQGGVPGASSCTK
Trigger: CTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp GAAGGAGGCTCCACTCACCCTCGGTCCCATCCACTCGGGCCCCCATaGGCACTGCCCACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATG +
Preference number: 1 (lower is better)
Translates to: EGGSTHPRSHPLGPP*ALPTSRRCAWCLFM
Trigger: CATGAAGAGGCACCAGGCACACCGCCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTGGAGCCTCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp TGGCACGGGTGCCTCAGCTCCCAGGCAGCAGAGGGAAACAGAAGCTaGCCAGGACACGGGAGCCTCCTTTGCTTCAGGCAGGCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: WHGCLSSQAAEGNRS*PGHGSLLCFRQAGL
Trigger: CAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGTCCTGGGCAGCTTCTGTTTCCCTCTGCTGCCTGGGAGCTGAGGCACCCGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp AGGGAAGACCCCGCCCTGGCCCAACTTCTGATGCCCTGGCTGATGTaGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: REDPALAQLLMPWLM*REEPSQASSLASAW
Trigger: CCAGGCAGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCATCAGAAGTTGGGCCAGGGCGGGGTCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp TCCCGGGGGCCCGCTGTTGTCCTTCCCTTTGAGCAAGCACGGGTGTaGAGATCTGGGTCCAGGCCCTCTCCACAGTGCCTGCGATGCCAG +
Preference number: 1 (lower is better)
Translates to: SRGPAVVLPFEQARV*RSGSRPSPQCLRCQ
Trigger: CTGGCATCGCAGGCACTGTGGAGAGGGCCTGGACCCAGATCTCCACACCCGTGCTTGCTCAAAGGGAAGGACAACAGCGGGCCCCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp CCCACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTaGCCCGGGCTGCTCCACTTGGAGCTCAGGCCAGCAGAAGCAGAC +
Preference number: 1 (lower is better)
Translates to: PTSRRCAWCLFMHQG*PGLLHLELRPAEAD
Trigger: GTCTGCTTCTGCTGGCCTGAGCTCCAAGTGGAGCAGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp TTCTACATCCCGGGGAGGGGAGGGCTAGGGCCACGCTGTGGGCCCTaGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACC +
Preference number: 1 (lower is better)
Translates to: FYIPGRGGLGPRCGP*QGDWEGRQPPILRT
Trigger: GGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCCAGGGCCCACAGCGTGGCCCTAGCCCTCCCCTCCCCGGGATGTAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR TCA 90 bp AGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTaGTCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGTGGGAGGCGG +
Preference number: 1 (lower is better)
Translates to: RQMESSKGGRGAHGG*SPKGGRSVQVCGRR
Trigger: CCGCCTCCCACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp GGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGCCTGGGACTTTaGCAAACAGGCAGGAAGCCCTCCTCCTGCCTAGGCATCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GGAESGLILGLCLGL*QTGRKPSSCLGICR
Trigger: CCTGCAGATGCCTAGGCAGGAGGAGGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp TGCCTAGGCATCTGCAGGAAGGAAAGGGACTGTGTCCACCCTCGGTaGGGGGCTCCTAAGGGCCCCACAGCTGCCAGGTTAGCACCGAGA +
Preference number: 1 (lower is better)
Translates to: CLGICRKERDCVHPR*GAPKGPTAARLAPR
Trigger: TCTCGGTGCTAACCTGGCAGCTGTGGGGCCCTTAGGAGCCCCCCACCGAGGGTGGACACAGTCCCTTTCCTTCCTGCAGATGCCTAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp AAATCGAGCAGGGAAGACCCCGCCCTGGCCCAACTTCTGATGCCCTaGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: KSSREDPALAQLLMP*LMWREEPSQASSLA
Trigger: GGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCATCAGAAGTTGGGCCAGGGCGGGGTCTTCCCTGCTCGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp ACAACCCCCACCCTCCCAAACCTCAGCTTGCCGGGACCTGCAGCTTaGGTTAGCTCCCGGGGGCCCGCTGTTGTCCTTCCCTTTGAGCAA +
Preference number: 1 (lower is better)
Translates to: TTPTLPNLSLPGPAA*VSSRGPAVVLPFEQ
Trigger: TTGCTCAAAGGGAAGGACAACAGCGGGCCCCCGGGAGCTAACCCAAGCTGCAGGTCCCGGCAAGCTGAGGTTTGGGAGGGTGGGGGTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp CCATGGAGGCTGATCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGTaGGAGGCGGGGGTACTAGAGAGGGGAGGAAGGAGGCTCCACTCA +
Preference number: 1 (lower is better)
Translates to: PWRLISQGRPIRASV*EAGVLERGGRRLHS
Trigger: TGAGTGGAGCCTCCTTCCTCCCCTCTCTAGTACCCCCGCCTCCCACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp GGCCTCTGCCTGGGACTTTGCCAAACAGGCAGGAAGCCCTCCTCCTaGCTAGGCATCTGCAGGAAGGAAAGGGACTGTGTCCACCCTCGG +
Preference number: 1 (lower is better)
Translates to: GLCLGLCQTGRKPSS*LGICRKERDCVHPR
Trigger: CCGAGGGTGGACACAGTCCCTTTCCTTCCTGCAGATGCCTAGGCAGGAGGAGGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp AGGGGAGGCCTGGTGACTTCCACAGCAAACCTCCAGACCCAAGCCTaGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAAT +
Preference number: 1 (lower is better)
Translates to: RGGLVTSTANLQTQA*SPGLLRREAVQAFN
Trigger: ATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGGGTCTGGAGGTTTGCTGTGGAAGTCACCAGGCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR TCA 90 bp AAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTaGTCGGCCTCCTGCCAACGTGCTTCTGAGGGAGGGGCCCATGGC +
Preference number: 1 (lower is better)
Translates to: KEGSLPFLGPKALGF*SASCQRASEGGAHG
Trigger: GCCATGGGCCCCTCCCTCAGAAGCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp CAGAAGCTGCCCAGGACACGGGAGCCTCCTTTGCTTCAGGCAGGCTaGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTG +
Preference number: 1 (lower is better)
Translates to: QKLPRTREPPLLQAG*AVRKPPWSEAKEGL
Trigger: CAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGTCCTGGGCAGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR TCA 90 bp AAAGAGGCCGCCTTGGGCAAGTGCATGGGAGCCCGGAAGTGGAACTaGCCAGGTGGGGCTCCACTGTCCTGTGTGGGCGAAGTGCAAAAA +
Preference number: 1 (lower is better)
Translates to: KEAALGKCMGARKWN*PGGAPLSCVGEVQK
Trigger: TTTTTGCACTTCGCCCACACAGGACAGTGGAGCCCCACCTGGTCAGTTCCACTTCCGGGCTCCCATGCACTTGCCCAAGGCGGCCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp GCAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTaGCACCCGGCAGCCTGGGGCCTAGCACCCAATGCATGTATGAAC +
Preference number: 1 (lower is better)
Translates to: AVQAFNAPVQRNCKG*HPAAWGLAPNACMN
Trigger: GTTCATACATGCATTGGGTGCTAGGCCCCAGGCTGCCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp TTAAAAGTGTTTCCTCAAACCATCCCCGTCCCAAAGAGGCCGCCTTaGGCAAGTGCATGGGAGCCCGGAAGTGGAACTGACCAGGTGGGG +
Preference number: 1 (lower is better)
Translates to: LKVFPQTIPVPKRPP*ASAWEPGSGTDQVG
Trigger: CCCCACCTGGTCAGTTCCACTTCCGGGCTCCCATGCACTTGCCCAAGGCGGCCTCTTTGGGACGGGGATGGTTTGAGGAAACACTTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 90 bp GTCTCTCTTTGCCTGGCTGACTACCTGCATACAGTAGGCACTCACTaGTGGAGTGAGGCACTGACTCCTCCAAAGATTGCAGGGGGCGGA +
Preference number: 1 (lower is better)
Translates to: VSLCLADYLHTVGTH*WSEALTPPKIAGGG
Trigger: TCCGCCCCCTGCAATCTTTGGAGGAGTCAGTGCCTCACTCCAGCAGTGAGTGCCTACTGTATGCAGGTAGTCAGCCAGGCAAAGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp TCTCTTTGCCTGGCTGACTACCTGCATACAGTAGGCACTCACTGCTaGAGTGAGGCACTGACTCCTCCAAAGATTGCAGGGGGCGGAGGA +
Preference number: 1 (lower is better)
Translates to: SLCLADYLHTVGTHC*SEALTPPKIAGGGG
Trigger: TCCTCCGCCCCCTGCAATCTTTGGAGGAGTCAGTGCCTCACTCCAGCAGTGAGTGCCTACTGTATGCAGGTAGTCAGCCAGGCAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR TCA 90 bp GCATCTTTGGCCCCCACTAACCATCTCCCTATTTCTGCATCCTGGTaGCCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTT +
Preference number: 1 (lower is better)
Translates to: ASLAPTNHLPISASW*PSARDESGRPSPGV
Trigger: AACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATGCAGAAATAGGGAGATGGTTAGTGGGGGCCAAAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 90 bp AGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTaGCACTTGGACGGCCACAAAGCCAACACACAGGGCAGGGTAGGG +
Preference number: 1 (lower is better)
Translates to: RTEEKYQPLFGRKAN*HLDGHKANTQGRVG
Trigger: CCCTACCCTGCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 90 bp GGGGAAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTaGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACAC +
Preference number: 1 (lower is better)
Translates to: GEITSKDRGEIPALI*AKSQLALGRPQSQH
Trigger: GTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 90 bp GAGAGGCTGGTAGCAGTCCAGCCCCCTGGCCAACCCAGCTCCCTGTaGGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: ERLVAVQPPGQPSSL*GLTLQPWAGPPAWL
Trigger: GAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCCAACAGGGAGCTGGGTTGGCCAGGGGGCTGGACTGCTACCAGCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACACGGGTGTGGAGATCTaGGTCCAGGCCCTCTCCACA +
Preference number: 2 (lower is better)
Translates to: GADPPALGGPTGLALLQDTGVEI*VQALST
Trigger: TGTGGAGAGGGCCTGGACCCAGATCTCCACACCCGT...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACTTCATGCACCAAGGCTaGCCCGGGCTGCTCCACTTG +
Preference number: 2 (lower is better)
Translates to: GADPPALGGPTGLALLQDFMHQG*PGLLHL
Trigger: CAAGTGGAGCAGCCCGGGCCAGCCTTGGTGCATGAA...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACCTCACCGGTTTCCTATaGTACTTGGGTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GADPPALGGPTGLALLQDLTGFL*YLGGEG
Trigger: CCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAG...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACCCAGAAACCACCCAGTaGGCTACCATGCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: GADPPALGGPTGLALLQDPETTQ*ATMHGQ
Trigger: CTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGG...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCGTGGGAGCAAGAGTATaGCTTCGGGCAGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: TPGTRHPRTMETREVAQGVGARV*LRAGGP
Trigger: GGGCCCTCCTGCCCGAAGTCATACTCTTGCTCCCAC...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR TCA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGGTGGGAGCAAGAGTATaGCTTCGGGCAGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: THPRSHPLGPPWALPTSRVGARV*LRAGGP
Trigger: GGGCCCTCCTGCCCGAAGTCATACTCTTGCTCCCAC...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGAGCTCCCTGTTGGGGCTaGCCCTCCAGCCTTGGGCGG +
Preference number: 2 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRAPCWG*PSSLGR
Trigger: CCGCCCAAGGCTGGAGGGTCAGCCCCAACAGGGAGC...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp ATGGAGGCTGATCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGTGGGAGGCGGGAAGGCTGGCCCGGGCTaGTCCACTTGGAGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: MEADLPREADPCKCVGGGKAGPG*STWSSG
Trigger: GCCTGAGCTCCAAGTGGAGCAGCCCGGGCCAGCCTT...CCCGCCTCCCACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCTGCCCCCAGCACACCTaGGCCAGGAGGGGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SKRGAGTSREALGNGFFSCPQHT*ARRGGL
Trigger: CAGGCCTCCCCTCCTGGCCCAGGTGTGCTGGGGGCA...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 90 bp GCTTGCCGGGACCTGCAGCTTGGGTTAGCTCCCGGGGGCCCGCTGTaGTCCTTCCCTTTGAGCAAGCACGGGTGTGGAGATCTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: ACRDLQLGLAPGGPL*SFPLSKHGCGDLGP
Trigger: TGGACCCAGATCTCCACACCCGTGCTTGCTCAAAGGGAAGGACAACAGCGGGCCCCCGGGAGCTAACCCAAGCTGCAGGTCCCGGCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGAGGTCCCCAGGCCTACTaGGGCGAGAGGCAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGGPQAY*GERQSR
Trigger: CCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACC...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGAGGCCCCCATGGGCACTaGCCACCTCAAGGCGGTGTG +
Preference number: 2 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRGPHGH*PPQGGV
Trigger: CACACCGCCTTGAGGTGGGCAGTGCCCATGGGGGCC...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCTGTGTCCACCCTCGGTaGGGGGCTCCTAAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SKRGAGTSREALGNGFFSCVHPR*GAPKGP
Trigger: GGGGCCCTTAGGAGCCCCCCACCGAGGGTGGACACA...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCTGGAGACCCGGGAAGTaGCCCAGGGCTGGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: PILRTKGARVLIGLLPTCWRPGK*PRAGQR
Trigger: CCGCTGGCCAGCCCTGGGCCACTTCCCGGGTCTCCA...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 90 bp GGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGCCTGGGACTTaGCCAAACAGGCAGGAAGCCCTCCTCCTGCCTAGGCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: GRSRVRPHPWPLPGT*PNRQEALLLPRHLQ
Trigger: CTGCAGATGCCTAGGCAGGAGGAGGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR TCA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGTGTTGTCCTTCCCTTTaGGCAAGCACGGGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKCCPSL*ASTGVE
Trigger: CTCCACACCCGTGCTTGCTCAAAGGGAAGGACAACA...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACATGCCACTGGCACGGGTaGCTCAGCTCCCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTCHWHG*LSSQAA
Trigger: TGCTGCCTGGGAGCTGAGGCACCCGTGCCAGTGGCA...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGGTGGGCTACCATGCATaGGCAGGGGGTGTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRVGYHA*AGGVPF
Trigger: GAAGGGCACACCCCCTGCCCATGCATGGTAGCCCAC...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCGAGGAAGAGGGAGCTTaGAATGGGGTCTCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: TPGTRHPRTMETREVAQGEEEGA*NGVSLS
Trigger: AGAGAGGGAGACCCCATTCCAAGCTCCCTCTTCCTC...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGGAGGAAGAGGGAGCTTaGAATGGGGTCTCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: THPRSHPLGPPWALPTSREEEGA*NGVSLS
Trigger: AGAGAGGGAGACCCCATTCCAAGCTCCCTCTTCCTC...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CAA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTaGGCCTCTGCCTGGGACTTTGCCAAACAGGCAGGAAGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: MPWLMWREEPSQASS*ASAWDFAKQAGSPP
Trigger: AGGAGGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR TCA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGCAACACCGAGCCATTTaGGACAAGCAAAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: THPRSHPLGPPWALPTSRQHRAI*DKQSTG
Trigger: CCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTG...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCAGGAACTGTAAAGGGTaGCACCCGGCAGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLRNCKG*HPAAWG
Trigger: GCCCCAGGCTGCCGGGTGGCACCCTTTACAGTTCCT...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTTCCCCTTTGCCTGCCTaGCCTCCCAGGGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLSPLPA*PPRAWP
Trigger: AGGCCAGGCCCTGGGAGGGCAGGCAGGCAAAGGGGA...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp CATCCTGGTGACCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTTCCTGGGCCCCAGTCCCTaGCGCATTCCCCCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: HPGDRQQEMSRGDPLLEFLGPSP*RIPPVK
Trigger: CTTCACTGGGGGAATGCGGCAGGGACTGGGGCCCAG...GAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCCTCCAGACCCAAGCCTaGTCCCCAGGCCTACTGAGG +
Preference number: 2 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLLQTQA*SPGLLR
Trigger: CCTCAGTAGGCCTGGGGACCAGGCTTGGGTCTGGAG...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGCAAGGGCAGCCGGAACGCTTCGCTCCAGCTACCCGGCCTCCCGCAAGAGGGTACACCCTCATTCTCCTaGAGAACACAGACCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SKGSRNASLQLPGLPQEGTPSFS*RTQTLW
Trigger: CCAGAGGGTCTGTGTTCTCCAGGAGAATGAGGGTGT...ACCCTCTTGCGGGAGGCCGGGTAGCTGGAGCGAAGCGTTCCGGCTGCCCTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCACCGGGCTGCTCCACTTaGAGCTCAGGCCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: GKWKAARVDEGPMEADLPPGCST*SSGQQK
Trigger: CTTCTGCTGGCCTGAGCTCCAAGTGGAGCAGCCCGG...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CAA 90 bp GGCAGCAGAGGGAAACAGAAGCTGCCCAGGACACGGGAGCCTCCTTaGCTTCAGGCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAA +
Preference number: 2 (lower is better)
Translates to: GSRGKQKLPRTREPP*LQAGWAVRKPPWSE
Trigger: TTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGTCCTGGGCAGCTTCTGTTTCCCTCTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTAGGAAGCCCTCCTCCTaGCTAGGCATCTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: MPWLMWREEPSQASSLASRKPSS*LGICRK
Trigger: CTTCCTGCAGATGCCTAGGCAGGAGGAGGGCTTCCT...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGGCCAGGCGCACCCTCTaGCAGTTCCTCCCACCGTTG +
Preference number: 2 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRARRTL*QFLPPL
Trigger: CAACGGTGGGAGGAACTGGCAGAGGGTGCGCCTGGC...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGCCAGGCGCACCCTCTaGCAGTTCCTCCCACCGTTG +
Preference number: 2 (lower is better)
Translates to: GREIGKEGSLPFLGPKALARRTL*QFLPPL
Trigger: CAACGGTGGGAGGAACTGGCAGAGGGTGCGCCTGGC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGGGGCAAGGGTGGGGTaGGAGCAAGAGTATGACTTC +
Preference number: 2 (lower is better)
Translates to: MPWLMWREEPSQASSLASGARVG*EQEYDF
Trigger: GAAGTCATACTCTTGCTCCCACCCCACCCTTGCCCC...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCAGTCTCCCCCATAGGGTaGCGGTGGTGGGGACCAGAT +
Preference number: 2 (lower is better)
Translates to: RDTRPHRFPMILGWGGGAVSPIG*RWWGPD
Trigger: ATCTGGTCCCCACCACCGCCACCCTATGGGGGAGAC...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGAGGGCCTAGCACCCAATaGATGTATGAACCCACGGAC +
Preference number: 2 (lower is better)
Translates to: VVRSKRGAGTSREALGNGGPSTQ*MYEPTD
Trigger: GTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCC...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCGAGGGAAACAGAAGCTaGCCAGGACACGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: PILRTKGARVLIGLLPTCEGNRS*PGHGSL
Trigger: GAGGCTCCCGTGTCCTGGGCAGCTTCTGTTTCCCTC...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACAGGGGCAAGGGTGGGGTaGGAGCAAGAGTATGACTTC +
Preference number: 2 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTGARVG*EQEYDF
Trigger: GAAGTCATACTCTTGCTCCCACCCCACCCTTGCCCC...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGAGAGACAGGTGGGATGTaGAAGGGGCAGAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGETGGM*KGQRNP
Trigger: AGGGTTCCTCTGCCCCTTCCACATCCCACCTGTCTC...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTCTGCTTGGTAATTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATTGCCCCCAGCACACCTaGGCCAGGAGGGGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: FCLVIRQMESSKGGRGAHCPQHT*ARRGGL
Trigger: CAGGCCTCCCCTCCTGGCCCAGGTGTGCTGGGGGCA...ATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAATTACCAAGCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCAATAGGGTGGCGGTGGTaGGGACCAGATGGCCCAACA +
Preference number: 2 (lower is better)
Translates to: RDTRPHRFPMILGWGGGAIGWRW*GPDGPT
Trigger: TGTTGGGCCATCTGGTCCCCACCACCGCCACCCTAT...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCCAAAGAGGCCGCCTTaGGCAAGTGCATGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLPKRPP*ASAWEP
Trigger: GGGCTCCCATGCACTTGCCCAAGGCGGCCTCTTTGG...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCTCTCGGTCCCCACCATaGTGTGAAGTGAAGGTCCGA +
Preference number: 2 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLSRSPP*CEVKVR
Trigger: TCGGACCTTCACTTCACATCATGGTGGGGACCGAGA...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR TCA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGAGCTGGAGTGAGGCACTaGCTCCTCCAAAGATTGCAG +
Preference number: 2 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRAGVRH*LLQRLQ
Trigger: CTGCAATCTTTGGAGGAGTCAGTGCCTCACTCCAGC...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCCACGGGAGCCTCCTTTaGTTCAGGCAGGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: FGRKANWHLDGHKANTQGHGSLL*FRQAGL
Trigger: CAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTG...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCAACCCAGCCCCATCCCTaGGTCAACACCGAGCCATTT +
Preference number: 2 (lower is better)
Translates to: RDTRPHRFPMILGWGGGATQPHP*VNTEPF
Trigger: AAATGGCTCGGTGTTGACCCAGGGATGGGGCTGGGT...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCTGTGTCCACCCTCGGTaGGGGGCTCCTAAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTACVHPR*GAPKGP
Trigger: GGGGCCCTTAGGAGCCCCCCACCGAGGGTGGACACA...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACAGGGCAGACGCACAACTaGAAGTTTCCACGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTGQTHN*KFPRQV
Trigger: AACCTGCCGTGGAAACTTCCAGTTGTGCGTCTGCCC...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCATTGCTTCAGGCAGGCTaGGCTGTGAGAAAGCCTCCG +
Preference number: 2 (lower is better)
Translates to: RDTRPHRFPMILGWGGGALLQAG*AVRKPP
Trigger: CGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAA...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCACCCCGGTCCCAATTCTaGGACCAACACCCTCATTCT +
Preference number: 2 (lower is better)
Translates to: GKWKAARVDEGPMEADLPPRSQF*DQHPHS
Trigger: AGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGG...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp ATGGAGGCTGATCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGTGGGAGGCGGGAAGCCAATTGGCACTTaGACGGCCACAAAGCCAACA +
Preference number: 2 (lower is better)
Translates to: MEADLPREADPCKCVGGGKPIGT*TATKPT
Trigger: TGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTT...CCCGCCTCCCACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCACAGCTTCTTGCCTCCTaGAGCCTGCATCCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: RDTRPHRFPMILGWGGGAQLLAS*SLHPLS
Trigger: TGAAAGGGGATGCAGGCTTCAGGAGGCAAGAAGCTG...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGCCCAGTGGGCTACCATaGATGGGCAGGGGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRPSGLP*MGRGCA
Trigger: GGCACACCCCCTGCCCATGCATGGTAGCCCACTGGG...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp CTGGGGCCTAGCACCCAATGCATGTATGAACCCACGGACAAACACAGCGAGTGGCTCTGCCTGGGACTTTaGCAAACAGGCAGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: LGPSTQCMYEPTDKHSEWLCLGL*QTGRKP
Trigger: GGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAG...CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGACCCAGCCCCATCCCTaGGTCAACACCGAGCCATTT +
Preference number: 2 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRTQPHP*VNTEPF
Trigger: AAATGGCTCGGTGTTGACCCAGGGATGGGGCTGGGT...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCCAACTTCTGATGCCCTaGCTGATGTGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: PILRTKGARVLIGLLPTCQLLMP*LMWREE
Trigger: CTCCTCCCTCCACATCAGCCAGGGCATCAGAAGTTG...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCGATGCGGGGAGGCTGTaGCCAGGCGCACCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKADAGRL*PGAPSA
Trigger: GGCAGAGGGTGCGCCTGGCCACAGCCTCCCCGCATC...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCGAAGGTCCGACAGGTTaGGCTGACCACCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: FGRKANWHLDGHKANTQGEGPTG*ADHPEE
Trigger: CTCCTCAGGGTGGTCAGCCCAACCTGTCGGACCTTC...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACAGAGGGAGCTTGGAATaGGGTCTCCCTCTCTATCTC +
Preference number: 2 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNRGSLE*GLPLYL
Trigger: GAGATAGAGAGGGAGACCCCATTCCAAGCTCCCTCT...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCCACCCACGCACAATaGAGACCCGGGAAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRATHAQ*RPGKWP
Trigger: GGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGC...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 90 bp GAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTaGGACGGCCACAAAGCCAACACACAGGGCAGGGTAGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: EEKYQPLFGRKANWH*DGHKANTQGRVGRG
Trigger: GCCCCTCCCTACCCTGCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCTCCTGCCTAGGCATCTaGAGGAAGGAAAGGGACTGT +
Preference number: 2 (lower is better)
Translates to: PILRTKGARVLIGLLPTCSCLGI*RKERDC
Trigger: ACAGTCCCTTTCCTTCCTGCAGATGCCTAGGCAGGA...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGAGGCCCTCTCCACAGTaGCTGCGATGCCAGGGGACC +
Preference number: 2 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGRPSPQ*LRCQGT
Trigger: GGTCCCCTGGCATCGCAGGCACTGTGGAGAGGGCCT...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGTCCTTGGCCTCTGCCTaGGACTTTGCCAAACAGGCA +
Preference number: 2 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRSLASA*DFAKQA
Trigger: TGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGA...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCAACTTCTGATGCCCTaGCTGATGTGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LGKWKAARVDEGPMEADLQLLMP*LMWREE
Trigger: CTCCTCCCTCCACATCAGCCAGGGCATCAGAAGTTG...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTAGAACACAGACCCTCTaGTCTCCCCTTTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLRTQTL*SPLCLP
Trigger: AGGCAGGCAAAGGGGAGACCAGAGGGTCTGTGTTCT...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTCCCAGTGGGCTACCATaGATGGGCAGGGGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGPSGLP*MGRGCA
Trigger: GGCACACCCCCTGCCCATGCATGGTAGCCCACTGGG...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCGACAAACACAGCGAGTaGGGCAGACGCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: FGRKANWHLDGHKANTQGDKHSE*GRRTTG
Trigger: TCCAGTTGTGCGTCTGCCCCACTCGCTGTGTTTGTC...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGCTCCAGACCCAAGCCTaGTCCCCAGGCCTACTGAGG +
Preference number: 2 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGLQTQA*SPGLLR
Trigger: CCTCAGTAGGCCTGGGGACCAGGCTTGGGTCTGGAG...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCGAAGGTCCGACAGGTTaGGCTGACCACCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAEGPTG*ADHPEE
Trigger: CTCCTCAGGGTGGTCAGCCCAACCTGTCGGACCTTC...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAAGAGGGAGCTTGGAATaGGGTCTCCCTCTCTATCTC +
Preference number: 2 (lower is better)
Translates to: GREIGKEGSLPFLGPKALRGSLE*GLPLYL
Trigger: GAGATAGAGAGGGAGACCCCATTCCAAGCTCCCTCT...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGTGAGAAAGCCTCCGTaGTCAGAAGCAAAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: GREIGKEGSLPFLGPKALVRKPP*SEAKEG
Trigger: CCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCAC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCAGAACACAGACCCTCTaGTCTCCCCTTTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: FGRKANWHLDGHKANTQGRTQTL*SPLCLP
Trigger: AGGCAGGCAAAGGGGAGACCAGAGGGTCTGTGTTCT...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGCCACGCTGTGGGCCCTaGCAGGGAGATTGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGPRCGP*QGDWEG
Trigger: TCCTTCCCAATCTCCCTGCCAGGGCCCACAGCGTGG...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGACGAGGGGCCCATaGAGGCTGATCTCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGWTRGP*RLISQG
Trigger: CCCTTGGGAGATCAGCCTCCATGGGCCCCTCGTCCA...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTAGGAACTGTAAAGGGTaGCACCCGGCAGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGRNCKG*HPAAWG
Trigger: GCCCCAGGCTGCCGGGTGGCACCCTTTACAGTTCCT...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR GCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCCTGGTACTGGGCAGCTaGTCTGACACCAGCAGCGCT +
Preference number: 2 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPLVLGS*SDTSSA
Trigger: AGCGCTGCTGGTGTCAGAGCAGCTGCCCAGTACCAG...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCCTACCCCCGGCTTTCTaGGACCCCAACTACCCAGCC +
Preference number: 2 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKALPPAF*DPNYPA
Trigger: GGCTGGGTAGTTGGGGTCCCAGAAAGCCGGGGGTAG...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCGTGGGCTACCATGCATaGGCAGGGGGTGTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKAVGYHA*AGGVPF
Trigger: GAAGGGCACACCCCCTGCCCATGCATGGTAGCCCAC...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGCCAGAAACCACCCAGTaGGCTACCATGCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRPETTQ*ATMHGQ
Trigger: CTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGG...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGTTGCTTCAGGCAGGCTaGGCTGTGAGAAAGCCTCCG +
Preference number: 2 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRLLQAG*AVRKPP
Trigger: CGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAA...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTCTGCTTGGTAATTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATATCCGTGCAAGTGTGTaGGAGGCGGGGGTACTAGAG +
Preference number: 2 (lower is better)
Translates to: FCLVIRQMESSKGGRGAHIRASV*EAGVLE
Trigger: CTCTAGTACCCCCGCCTCCCACACACTTGCACGGAT...ATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAATTACCAAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CAA 90 bp AAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATaGGCACTTGGACGGCCACAAAGCCAACACACAGGGCAGGGTAGG +
Preference number: 2 (lower is better)
Translates to: KDRGEIPALIWAKSQ*ALGRPQSQHTGQGR
Trigger: CCTACCCTGCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGTCCTTGGCCTCTGCCTaGGACTTTGCCAAACAGGCA +
Preference number: 2 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELSLASA*DFAKQA
Trigger: TGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGA...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCCCCCGGTCCCAATTCTaGGACCAACACCCTCATTCT +
Preference number: 2 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAPRSQF*DQHPHS
Trigger: AGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGG...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 90 bp GGGGGAAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTaGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACA +
Preference number: 2 (lower is better)
Translates to: GGNHLQGQRRNTSPY*GEKPIGTWTATKPT
Trigger: TGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 90 bp TACTGGGCAGCTGCTCTGACACCAGCAGCGCTTTCTGAAGAGGGCTaGCTACCCAATACACCCATTTCACAGAAGGGCAAACTAAAGGTC +
Preference number: 2 (lower is better)
Translates to: YWAAALTPAALSEEG*LPNTPISQKGKLKV
Trigger: GACCTTTAGTTTGCCCTTCTGTGAAATGGGTGTATTGGGTAGCAAGCCCTCTTCAGAAAGCGCTGCTGGTGTCAGAGCAGCTGCCCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGCACCATGATGTGAAGTaGAGGTCCGACAGGTTGGGC +
Preference number: 2 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGHHDVK*RSDRLG
Trigger: GCCCAACCTGTCGGACCTTCACTTCACATCATGGTG...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCGAGACAGGTGGGATGTaGAAGGGGCAGAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKAETGGM*KGQRNP
Trigger: AGGGTTCCTCTGCCCCTTCCACATCCCACCTGTCTC...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCGGGCAGACGCACAACTaGAAGTTTCCACGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPGQTHN*KFPRQV
Trigger: AACCTGCCGTGGAAACTTCCAGTTGTGCGTCTGCCC...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCGACAAACACAGCGAGTaGGGCAGACGCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPDKHSE*GRRTTG
Trigger: TCCAGTTGTGCGTCTGCCCCACTCGCTGTGTTTGTC...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp TTCTGCTTGGTAATTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGAAGCAGACCACCTGTaGCAAGGGAAATGCATTCCC +
Preference number: 2 (lower is better)
Translates to: FCLVIRQMESSKGGRGAHEADHL*QGKCIP
Trigger: GGGAATGCATTTCCCTTGCCACAGGTGGTCTGCTTC...ATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAATTACCAAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTAACGTAGGAGGAGATTaGGCTTTGGGGGTTATTTCA +
Preference number: 2 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLNVGGD*ALGVIS
Trigger: TGAAATAACCCCCAAAGCCCAATCTCCTCCTACGTT...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR TCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTGTCCCCACCATGATGTaGAGTGAAGGTCCGACAGGT +
Preference number: 2 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGVPTMM*SEGPTG
Trigger: ACCTGTCGGACCTTCACTTCACATCATGGTGGGGAC...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR TCA 90 bp CATCCTGGTGACCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTTCACCAAAACAACAAAATaGCACAGAAGAGTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: HPGDRQQEMSRGDPLLEFTKTTK*HRRVGK
Trigger: TTTGCCCACTCTTCTGTGTCATTTTGTTGTTTTGGT...GAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGAGTCCAGGCCTTCAATaGCCCTGTTCAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRSPGLQ*PCSKEL
Trigger: CAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACT...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR TCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTCAACACCGAGCCATTTaGGACAAGCAAAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGQHRAI*DKQSTG
Trigger: CCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTG...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCACACCCTCATTCTCCTaGAGAACACAGACCCTCTGG +
Preference number: 2 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKATPSFS*RTQTLW
Trigger: CCAGAGGGTCTGTGTTCTCCAGGAGAATGAGGGTGT...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 90 bp TTGATCATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTaGACCTTGACCCCTTTGCAGGGTGAGAACAAAGAGGGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: LIITSSQIIGRMRLI*TLTPLQGENKEGLW
Trigger: CCACAACCCCTCTTTGTTCTCACCCTGCAAAGGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR GCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTAGTCCAGGCCTTCAATaGCCCTGTTCAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGSPGLQ*PCSKEL
Trigger: CAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACT...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp CAACCCAGCTCCCTGTTGGGGCTGACCCTCCAGCCTTaGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACC +
Preference number: 3 (lower is better)
Translates to: QPSSLLGLTLQP*AGPPAWLSSRT
Trigger: GGTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCCAACAGGGAGCTGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 72 bp AGGCCCTCTCCACAGTGCCTGCGATGCCAGGGGACCTaGCAGCTGGGCCCAGGCCTCCGCCCCATCCTGACA +
Preference number: 3 (lower is better)
Translates to: RPSPQCLRCQGT*QLGPGLRPILT
Trigger: TGTCAGGATGGGGCGGAGGCCTGGGCCCAGCTGGCAGGTCCCCTGGCATCGCAGGCACTGTGGAGAGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp CCGGGGAGGGGAGGGCTAGGGCCACGCTGTGGGCCCTaGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATT +
Preference number: 3 (lower is better)
Translates to: PGRGGLGPRCGP*QGDWEGRQPPI
Trigger: AATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCCAGGGCCCACAGCGTGGCCCTAGCCCTCCCCTCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp TCCACTCACCCTCGGTCCCATCCACTCGGGCCCCCATaGGCACTGCCCACCTCAAGGCGGTGTGCCTGGTGC +
Preference number: 3 (lower is better)
Translates to: STHPRSHPLGPP*ALPTSRRCAWC
Trigger: GCACCAGGCACACCGCCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 72 bp CCATGGGCACTGCCCACCTCAAGGCGGTGTGCCTGGTaGCTCTTCATGCACCAAGGCTGGCCCGGGCTGCTC +
Preference number: 3 (lower is better)
Translates to: PWALPTSRRCAW*LFMHQGWPGLL
Trigger: GAGCAGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTGGGCAGTGCCCATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 72 bp ACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTaGCCACCTCAAGGCGGTGTGCCTGGTGCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: TLGPIHSGPHGH*PPQGGVPGASS
Trigger: TGAAGAGGCACCAGGCACACCGCCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp ACCCTCCCAAACCTCAGCTTGCCGGGACCTGCAGCTTaGGTTAGCTCCCGGGGGCCCGCTGTTGTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: TLPNLSLPGPAA*VSSRGPAVVLP
Trigger: GGGAAGGACAACAGCGGGCCCCCGGGAGCTAACCCAAGCTGCAGGTCCCGGCAAGCTGAGGTTTGGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp AGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTaGCCCGGGCTGCTCCACTTGGAGCTCAGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: RRCAWCLFMHQG*PGLLHLELRPA
Trigger: TGCTGGCCTGAGCTCCAAGTGGAGCAGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR TCA 72 bp GCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCTTCTaGGGGAGGGGCCCATGGCAGCACAGCCAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: ARVLIGLLPTCF*GRGPWQHSQEA
Trigger: GGCTTCCTGGCTGTGCTGCCATGGGCCCCTCCCTCAGAAGCACGTTGGCAGGAGGCCGATCAGAACCCTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR GCA 72 bp CCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTaGTCCACTTGGAGCTCAGGCCAGCAGAAGCAGACC +
Preference number: 3 (lower is better)
Translates to: PGASSCTKAGPG*STWSSGQQKQT
Trigger: GGTCTGCTTCTGCTGGCCTGAGCTCCAAGTGGAGCAGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp ATCCCCGTCCCAAAGAGGCCGCCTTGGGCAAGTGCATaGGAGCCCGGAAGTGGAACTGACCAGGTGGGGCTC +
Preference number: 3 (lower is better)
Translates to: IPVPKRPPWASA*EPGSGTDQVGL
Trigger: GAGCCCCACCTGGTCAGTTCCACTTCCGGGCTCCCATGCACTTGCCCAAGGCGGCCTCTTTGGGACGGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR TCA 72 bp CAAACCTCCAGACCCAAGCCTGGTCCCCAGGCCTACTaGGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTG +
Preference number: 3 (lower is better)
Translates to: QTSRPKPGPQAY*GERQSRPSMPL
Trigger: CAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGGGTCTGGAGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR TCA 72 bp GCCTTGGGCAAGTGCATGGGAGCCCGGAAGTGGAACTaGCCAGGTGGGGCTCCACTGTCCTGTGTGGGCGAA +
Preference number: 3 (lower is better)
Translates to: ALGKCMGARKWN*PGGAPLSCVGE
Trigger: TTCGCCCACACAGGACAGTGGAGCCCCACCTGGTCAGTTCCACTTCCGGGCTCCCATGCACTTGCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp GTGGGGAGGGAGGTCTCCCCCATAGGGTGGCGGTGGTaGGGACCAGATGGCCCAACAACTGGGAAAGGAACA +
Preference number: 3 (lower is better)
Translates to: VGREVSPIGWRW*GPDGPTTGKGT
Trigger: TGTTCCTTTCCCAGTTGTTGGGCCATCTGGTCCCCACCACCGCCACCCTATGGGGGAGACCTCCCTCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCCCCGGGGGCCCGCTGTaGTCCTTCCCTTTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSPGGPL*SFPLSK
Trigger: CTTGCTCAAAGGGAAGGACAACAGCGGGCCCCCGGG...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR TCA 72 bp GAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTaGTCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGT +
Preference number: 3 (lower is better)
Translates to: ESSKGGRGAHGG*SPKGGRSVQVC
Trigger: ACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 72 bp AGGGTGCCACCCGGCAGCCTGGGGCCTAGCACCCAATaGATGTATGAACCCACGGACAAACACAGCGAGTGG +
Preference number: 3 (lower is better)
Translates to: RVPPGSLGPSTQ*MYEPTDKHSEW
Trigger: CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAGGCTGCCGGGTGGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp ATCTGCAGGAAGGAAAGGGACTGTGTCCACCCTCGGTaGGGGGCTCCTAAGGGCCCCACAGCTGCCAGGTTA +
Preference number: 3 (lower is better)
Translates to: ICRKERDCVHPR*GAPKGPTAARL
Trigger: TAACCTGGCAGCTGTGGGGCCCTTAGGAGCCCCCCACCGAGGGTGGACACAGTCCCTTTCCTTCCTGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp GAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGCCTaGGACTTTGCCAAACAGGCAGGAAGCCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: EEPSQASSLASA*DFAKQAGSPPP
Trigger: AGGAGGAGGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACTCGGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp CCCGCTGTTGTCCTTCCCTTTGAGCAAGCACGGGTGTaGAGATCTGGGTCCAGGCCCTCTCCACAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: PAVVLPFEQARV*RSGSRPSPQCL
Trigger: CAGGCACTGTGGAGAGGGCCTGGACCCAGATCTCCACACCCGTGCTTGCTCAAAGGGAAGGACAACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGACAGTTCCTCCCACCGTaGAGGGGGTTAGGAAAGAGC +
Preference number: 3 (lower is better)
Translates to: VVRSKRGAGTSREALGNGQFLPP*RGLGKS
Trigger: GCTCTTTCCTAACCCCCTCAACGGTGGGAGGAACTG...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CAA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCACCTCTGCCTGGGACTTaGCCAAACAGGCAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: RDTRPHRFPMILGWGGGAPLPGT*PNRQEA
Trigger: GGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGG...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCAGTCAGGCCTCATCCTaGGCCTCTGCCTGGGACTTT +
Preference number: 3 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLSQASS*ASAWDF
Trigger: AAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACT...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CAA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCACGCCCCATCCTGACATaGCCACCTCACCTGTGCAAT +
Preference number: 3 (lower is better)
Translates to: GKWKAARVDEGPMEADLPRPILT*PPHLCN
Trigger: ATTGCACAGGTGAGGTGGCAATGTCAGGATGGGGCG...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR TCA 72 bp AGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTaGTCGGCCTCCTGCCAACGTGCTTCTGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: SLPFLGPKALGF*SASCQRASEGG
Trigger: CCCTCCCTCAGAAGCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR GCA 72 bp GCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTaGCACCCGGCAGCCTGGGGCCTAGCACCCAATGCA +
Preference number: 3 (lower is better)
Translates to: AFNAPVQRNCKG*HPAAWGLAPNA
Trigger: TGCATTGGGTGCTAGGCCCCAGGCTGCCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp CCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATaGGGTCTCCCTCTCTATCTCGGTCCCCACCATGAT +
Preference number: 3 (lower is better)
Translates to: PPQTPGGRGSLE*GLPLYLGPHHD
Trigger: ATCATGGTGGGGACCGAGATAGAGAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp CCCAGGACACGGGAGCCTCCTTTGCTTCAGGCAGGCTaGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAA +
Preference number: 3 (lower is better)
Translates to: PRTREPPLLQAG*AVRKPPWSEAK
Trigger: TTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp TTTCCTCAAACCATCCCCGTCCCAAAGAGGCCGCCTTaGGCAAGTGCATGGGAGCCCGGAAGTGGAACTGAC +
Preference number: 3 (lower is better)
Translates to: FPQTIPVPKRPP*ASAWEPGSGTD
Trigger: GTCAGTTCCACTTCCGGGCTCCCATGCACTTGCCCAAGGCGGCCTCTTTGGGACGGGGATGGTTTGAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCAGTCAGGCCTCATCCTaGGCCTCTGCCTGGGACTTT +
Preference number: 3 (lower is better)
Translates to: PILRTKGARVLIGLLPTCSQASS*ASAWDF
Trigger: AAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACT...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CAA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCACACGGGAGCCTCCTTaGCTTCAGGCAGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: FGRKANWHLDGHKANTQGTREPP*LQAGWA
Trigger: AGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGT...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CAA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCACTGTTGTCCTTCCCTTaGAGCAAGCACGGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: GKWKAARVDEGPMEADLPLLSFP*SKHGCG
Trigger: TCCACACCCGTGCTTGCTCAAAGGGAAGGACAACAG...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR TCA 72 bp GGAATGGGGTCTCCCTCTCTATCTCGGTCCCCACCATaGTGTGAAGTGAAGGTCCGACAGGTTGGGCTGACC +
Preference number: 3 (lower is better)
Translates to: GMGSPSLSRSPP*CEVKVRQVGLT
Trigger: GGTCAGCCCAACCTGTCGGACCTTCACTTCACATCATGGTGGGGACCGAGATAGAGAGGGAGACCCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR TCA 72 bp CCCTATTTCTGCATCCTGGTGACCGTCAGCAAGAGATaGGTCGGGGAGACCCTCTCCTGGAGTTCTAGCCCC +
Preference number: 3 (lower is better)
Translates to: PYFCILVTVSKR*VGETLSWSSSP
Trigger: GGGGCTAGAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATGCAGAAATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR GCA 72 bp CTGGGACTTTGCCAAACAGGCAGGAAGCCCTCCTCCTaGCTAGGCATCTGCAGGAAGGAAAGGGACTGTGTC +
Preference number: 3 (lower is better)
Translates to: LGLCQTGRKPSS*LGICRKERDCV
Trigger: GACACAGTCCCTTTCCTTCCTGCAGATGCCTAGGCAGGAGGAGGGCTTCCTGCCTGTTTGGCAAAGTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp CCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTaGAGAACACAGACCCTCTGGTCTCCCCTTTGCCTG +
Preference number: 3 (lower is better)
Translates to: PVPILGPTPSFS*RTQTLWSPLCL
Trigger: CAGGCAAAGGGGAGACCAGAGGGTCTGTGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp AGGAGGGAACCACGAAGGCCTGGGAGGGGGCATCTTTaGCCCCCACTAACCATCTCCCTATTTCTGCATCCT +
Preference number: 3 (lower is better)
Translates to: RREPRRPGRGHL*PPLTISLFLHP
Trigger: AGGATGCAGAAATAGGGAGATGGTTAGTGGGGGCCAAAGATGCCCCCTCCCAGGCCTTCGTGGTTCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp CATCCTGGTGACCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTTCAGGCTCATTTTGACCTaGACCCCTTTGCAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: HPGDRQQEMSRGDPLLEFRLILT*TPLQGE
Trigger: CTCACCCTGCAAAGGGGTCAAGGTCAAAATGAGCCT...GAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR TCA 72 bp GCCCCCACTAACCATCTCCCTATTTCTGCATCCTGGTaGCCGTCAGCAAGAGATGAGTCGGGGAGACCCTCT +
Preference number: 3 (lower is better)
Translates to: APTNHLPISASW*PSARDESGRPS
Trigger: AGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATGCAGAAATAGGGAGATGGTTAGTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCAAAGCCAATTGGCACTaGGACGGCCACAAAGCCAAC +
Preference number: 3 (lower is better)
Translates to: LGKWKAARVDEGPMEADLKANWH*DGHKAN
Trigger: GTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTT...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp AGCAAGGGCAGCCGGAACGCTTCGCTCCAGCTACCCGGCCTCCCGCAAGAGGGTATAAAGCAAACCAGATaGCAACTTCTGCTTGGTAAT +
Preference number: 3 (lower is better)
Translates to: SKGSRNASLQLPGLPQEGIKQTR*QLLLGN
Trigger: ATTACCAAGCAGAAGTTGCAATCTGGTTTGCTTTAT...ACCCTCTTGCGGGAGGCCGGGTAGCTGGAGCGAAGCGTTCCGGCTGCCCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCAGGATGAGGCTCATTTaGACCTTGACCCCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSRMRLI*TLTPLQ
Trigger: CTGCAAAGGGGTCAAGGTCAAAATGAGCCTCATCCT...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp CAATGCATGTATGAACCCACGGACAAACACAGCGAGTaGGGCAGACGCACAACTGGAAGTTTCCACGGCAGG +
Preference number: 3 (lower is better)
Translates to: QCMYEPTDKHSE*GRRTTGSFHGR
Trigger: CCTGCCGTGGAAACTTCCAGTTGTGCGTCTGCCCCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp CTGGCTGACTACCTGCATACAGTAGGCACTCACTGCTaGAGTGAGGCACTGACTCCTCCAAAGATTGCAGGG +
Preference number: 3 (lower is better)
Translates to: LADYLHTVGTHC*SEALTPPKIAG
Trigger: CCCTGCAATCTTTGGAGGAGTCAGTGCCTCACTCCAGCAGTGAGTGCCTACTGTATGCAGGTAGTCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR-3UTR CAA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTATCAACACCGAGCCATTaGAGACAAGCAAAGCACAGG +
Preference number: 3 (lower is better)
Translates to: GREIGKEGSLPFLGPKALSTPSH*RQAKHR
Trigger: CCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGA...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR TCA 72 bp TTCCCCCATGAGACCGTTAGTCTCTCTTTGCCTGGCTaGCTACCTGCATACAGTAGGCACTCACTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: FPHETVSLSLPG*LPAYSRHSLLE
Trigger: CTCCAGCAGTGAGTGCCTACTGTATGCAGGTAGTCAGCCAGGCAAAGAGAGACTAACGGTCTCATGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp AAACACATTTCTATGGTCTCTGGAAACACCTGTAACTaGCACCCAGGTGGTCACTCACCTGGGGGAGGGGGT +
Preference number: 3 (lower is better)
Translates to: KHISMVSGNTCN*HPGGHSPGGGG
Trigger: ACCCCCTCCCCCAGGTGAGTGACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CCA 72 bp GAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTaGCACTTGGACGGCCACAAAGCCAACACACAGGGC +
Preference number: 3 (lower is better)
Translates to: EKYQPLFGRKAN*HLDGHKANTQG
Trigger: GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CAA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGCGAAAAGCCAATaGGCACTTGGACGGCCACAA +
Preference number: 3 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGWAKSQ*ALGRPQ
Trigger: TTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCA...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp ACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTaGGCGAAAAGCCAATTGGCACTTGGACGGCCACAA +
Preference number: 3 (lower is better)
Translates to: TSKDRGEIPALI*AKSQLALGRPQ
Trigger: TTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR-3UTR CAA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGGAACGTAGGAGGAGATaGGGCTTTGGGGGTTATTTC +
Preference number: 3 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGERRRR*GFGGYF
Trigger: GAAATAACCCCCAAAGCCCAATCTCCTCCTACGTTC...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CCA 72 bp CCACTGGAGGCAAAGTTTAGCCAGCTGGGAGCTGGATaGTTGAACCACATACAAAGGCAACAACACTTCATT +
Preference number: 3 (lower is better)
Translates to: PLEAKFSQLGAG*LNHIQRQQHFI
Trigger: AATGAAGTGTTGTTGCCTTTGTATGTGGTTCAACCATCCAGCTCCCAGCTGGCTAAACTTTGCCTCCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CAA 72 bp CCAACCCAGCTCCCTGTTGGGGCTGACCCTCCAGCCTaGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PTQLPVGADPPA*GGPTGLALLQD
Trigger: GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCCAACAGGGAGCTGGGTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AGCAAGGGCAGCCGGAACGCTTCGCTCCAGCTACCCGGCCTCCCGCAAGAGGGTCTGACCCTCCAGCCTTaGGCGGGCCCACCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SKGSRNASLQLPGLPQEGLTLQP*AGPPAW
Trigger: CCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAG...ACCCTCTTGCGGGAGGCCGGGTAGCTGGAGCGAAGCGTTCCGGCTGCCCTTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACCAGACAGCTCCATCTTaGTCAGCGGCACCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GADPPALGGPTGLALLQDQTAPS*SAAPTA
Trigger: GGCTGTGGGTGCCGCTGAGCAAGATGGAGCTGTCTG...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACGAAGGTCCGACAGGTTaGGCTGACCACCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GADPPALGGPTGLALLQDEGPTG*ADHPEE
Trigger: CTCCTCAGGGTGGTCAGCCCAACCTGTCGGACCTTC...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTAGGGGACCTGCCAGCTaGGCCCAGGCCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: HLKAVCLVPLHAPRLARARGPAS*AQASAP
Trigger: TGGGGCGGAGGCCTGGGCCCAGCTGGCAGGTCCCCT...AGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCGGTCCCCAGGCCTACTaGGGCGAGAGGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPGTRHPRTMETREVAQGGPQAY*GERQSR
Trigger: CCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACC...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCTGCTCGCCCCAATGCTaGCACCGCCCCCAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESCSPQC*HRPQRR
Trigger: GCGCCGCTGGGGGCGGTGGCAGCATTGGGGCGAGCA...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCCCACTCGGGCCCCCATaGGCACTGCCCACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TPGTRHPRTMETREVAQGPLGPP*ALPTSR
Trigger: CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGG...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGCCCAGTGGGCTACCATaGATGGGCAGGGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKPSGLP*MGRGCA
Trigger: GGCACACCCCCTGCCCATGCATGGTAGCCCACTGGG...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACCCCCGGTCCCAATTCTaGGACCAACACCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: GADPPALGGPTGLALLQDPRSQF*DQHPHS
Trigger: AGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGG...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGAGGCCAGTCTTGTGCTaGCTCCAGGGCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKRPVLC*LQGLGP
Trigger: AGGGCCCAGGCCCTGGAGCCAGCACAAGACTGGCCT...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGGCCGGCAGCAGCTGTaGCCTCAGGCGGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNGRQQL*PQAVPA
Trigger: AGCGGGCACCGCCTGAGGTCACAGCTGCTGCCGGCC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAGGCCGGCAGCAGCTGTaGCCTCAGGCGGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPGRQQL*PQAVPA
Trigger: AGCGGGCACCGCCTGAGGTCACAGCTGCTGCCGGCC...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCCTGAGGCCTCAGCCTTaGCGGGGGACGGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESLRPQP*RGTGLP
Trigger: TGGTAGCCCCGTCCCCCGGCAAGGCTGAGGCCTCAG...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACCGGAGGAGCCAGAGCTaGGGGCGTCGTAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNRRSQS*GRRRGR
Trigger: CCGCCCCCTACGACGCCCGCAGCTCTGGCTCCTCCG...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGTGCTCGCCCCAATGCTaGCACCGCCCCCAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVCSPQC*HRPQRR
Trigger: GCGCCGCTGGGGGCGGTGGCAGCATTGGGGCGAGCA...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGCTACCCCCGGCTTTCTaGGACCCCAACTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: THPRSHPLGPPWALPTSRLPPAF*DPNYPA
Trigger: GGCTGGGTAGTTGGGGTCCCAGAAAGCCGGGGGTAG...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGTGGAGACCCGGGAAGTaGCCCAGGGCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRWRPGK*PRAGQR
Trigger: CCGCTGGCCAGCCCTGGGCCACTTCCCGGGTCTCCA...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGGGCTGACCCTCCAGCCTTGGGCGGGCCCACCGGCCTGGCTCTCCTCCAGGACAGATGGCCCAACAACTaGGAAAGGAACAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GADPPALGGPTGLALLQDRWPNN*ERNRRG
Trigger: CCCCCTTCTGTTCCTTTCCCAGTTGTTGGGCCATCT...GTCCTGGAGGAGAGCCAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGAAGGCGCTAGGGTTCTaGTCGGCCTCCTGCCAACGT +
Preference number: 4 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKKALGF*SASCQR
Trigger: ACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTT...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGGCTCCCTGTTGGGGCTaGCCCTCCAGCCTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVAPCWG*PSSLGR
Trigger: CCGCCCAAGGCTGGAGGGTCAGCCCCAACAGGGAGC...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCGCCCGGAAGTGGAACTaGCCAGGTGGGGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCARKWN*PGGAPL
Trigger: CAGTGGAGCCCCACCTGGTCAGTTCCACTTCCGGGC...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGACTGAGGCCTCAGCCTTaGCGGGGGACGGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGLRPQP*RGTGLP
Trigger: TGGTAGCCCCGTCCCCCGGCAAGGCTGAGGCCTCAG...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCGCCCCCAGCGGCGCCTaGTACCCCAGCAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLAPSGA*YPSSHL
Trigger: AAGGTGGCTGCTGGGGTAGCAGGCGCCGCTGGGGGC...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCTGGGCGAGGAGGCACTaGCGCTCGGCTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCWARRH*RSASGG
Trigger: TCCTCCTGAAGCCGAGCGCCAGTGCCTCCTCGCCCA...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216083.6
CDS-3UTR CCA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCCCGAGAAGGGCGAAATaGGCGGGCGCAGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SKRGAGTSREALGNGFFSPRRAK*AGAVRG
Trigger: GCCCCGGACTGCGCCCGCCCATTTCGCCCTTCTCGG...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGTGCCCGCTTGCTGGTaGCTGCCGACTCGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASVPACW*LPTREG
Trigger: TCCCTCCCGAGTCGGCAGCCACCAGCAAGCGGGCAC...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGCGGTGCCCGCTTGCTaGTGGCTGCCGACTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNAVPAC*WLPTRE
Trigger: CTCCCGAGTCGGCAGCCACCAGCAAGCGGGCACCGC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGATGCCCCCAGCACACCTaGGCCAGGAGGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRCPQHT*ARRGGL
Trigger: CAGGCCTCCCCTCCTGGCCCAGGTGTGCTGGGGGCA...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGATAGGGTGGCGGTGGTaGGGACCAGATGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: THPRSHPLGPPWALPTSRIGWRW*GPDGPT
Trigger: TGTTGGGCCATCTGGTCCCCACCACCGCCACCCTAT...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTTGGACGAGGGGCCCATaGAGGCTGATCTCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: HLKAVCLVPLHAPRLARAWTRGP*RLISQG
Trigger: CCCTTGGGAGATCAGCCTCCATGGGCCCCTCGTCCA...AGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGGCCCCCAGCGGCGCCTaGTACCCCAGCAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLAPSGA*YPSSHL
Trigger: AAGGTGGCTGCTGGGGTAGCAGGCGCCGCTGGGGGC...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCTGGAGCCCCCTCACTTaGTCGCCCCAATGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESWSPLT*SPQCCH
Trigger: GTGGCAGCATTGGGGCGAGCAAGTGAGGGGGCTCCA...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCACCCAGTGGGCTACCATaGATGGGCAGGGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSPSGLP*MGRGCA
Trigger: GGCACACCCCCTGCCCATGCATGGTAGCCCACTGGG...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCAGGAAGCCCTCCTCCTaGCTAGGCATCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TPGTRHPRTMETREVAQGRKPSS*LGICRK
Trigger: CTTCCTGCAGATGCCTAGGCAGGAGGAGGGCTTCCT...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCCTCTGCCTGGGACTTTaGCAAACAGGCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TPGTRHPRTMETREVAQGLCLGL*QTGRKP
Trigger: GGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAG...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGCCAGGCGCACCCTCTaGCAGTTCCTCCCACCGTTG +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASARRTL*QFLPPL
Trigger: CAACGGTGGGAGGAACTGGCAGAGGGTGCGCCTGGC...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCGATGCCAGGGGACCTaGCAGCTGGGCCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLRCQGT*QLGPGL
Trigger: GAGGCCTGGGCCCAGCTGGCAGGTCCCCTGGCATCG...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp AGCAAGGGCAGCCGGAACGCTTCGCTCCAGCTACCCGGCCTCCCGCAAGAGGGTGGCAAGAAACCAAACTaGCCACTCACCAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: SKGSRNASLQLPGLPQEGGKKPN*PLTSPL
Trigger: CAGGGGGCTGGTGAGTGGGCAGTTTGGTTTCTTGCC...ACCCTCTTGCGGGAGGCCGGGTAGCTGGAGCGAAGCGTTCCGGCTGCCCTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTCTGGGCCCCAGTCCCTaGCGCATTCCCCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASLGPSP*RIPPVK
Trigger: CTTCACTGGGGGAATGCGGCAGGGACTGGGGCCCAG...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGACTCCTCCAAAGATTaGAGGGGGCGGAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKDSSKD*RGRRRE
Trigger: TTCCCTCCTCCGCCCCCTGCAATCTTTGGAGGAGTC...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AGCAAGGGCAGCCGGAACGCTTCGCTCCAGCTACCCGGCCTCCCGCAAGAGGGTGGGGCAAGGGTGGGGTaGGAGCAAGAGTATGACTTC +
Preference number: 4 (lower is better)
Translates to: SKGSRNASLQLPGLPQEGGARVG*EQEYDF
Trigger: GAAGTCATACTCTTGCTCCCACCCCACCCTTGCCCC...ACCCTCTTGCGGGAGGCCGGGTAGCTGGAGCGAAGCGTTCCGGCTGCCCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACTGTGTCCACCCTCGGTaGGGGGCTCCTAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNCVHPR*GAPKGP
Trigger: GGGGCCCTTAGGAGCCCCCCACCGAGGGTGGACACA...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCGATGCGGGGAGGCTGTaGCCAGGCGCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCDAGRL*PGAPSA
Trigger: GGCAGAGGGTGCGCCTGGCCACAGCCTCCCCGCATC...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATGTGGCCTCTGCCACTaGCACGGGTGCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGCGLCH*HGCLSS
Trigger: GGAGCTGAGGCACCCGTGCCAGTGGCAGAGGCCACA...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGTGGAGACCCGGGAAGTaGCCCAGGGCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLWRPGK*PRAGQR
Trigger: CCGCTGGCCAGCCCTGGGCCACTTCCCGGGTCTCCA...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGCCACCCACGCACAATaGAGACCCGGGAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASATHAQ*RPGKWP
Trigger: GGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGC...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGGCCACCCACGCACAATaGAGACCCGGGAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRATHAQ*RPGKWP
Trigger: GGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGC...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCGAGCAAGCACGGGTGTaGAGATCTGGGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESEQARV*RSGSRP
Trigger: GGGCCTGGACCCAGATCTCCACACCCGTGCTTGCTC...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CATCCTGGTGACCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTTCCCGGGACCTGCAGCTTaGGTTAGCTCCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HPGDRQQEMSRGDPLLEFPGPAA*VSSRGP
Trigger: GGGCCCCCGGGAGCTAACCCAAGCTGCAGGTCCCGG...GAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGCCCATAGGGTGGCGGTaGTGGGGACCAGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRPIGWR*WGPDGP
Trigger: TGGGCCATCTGGTCCCCACCACCGCCACCCTATGGG...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGCACATTGGAGCAGGGTaGCATCTCGGGGCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRHIGAG*HLGAPV
Trigger: GACTGGCGCCCCGAGATGTCACCCTGCTCCAATGTG...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGAGTGGGAGCAAGAGTATaGCTTCGGGCAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGVGARV*LRAGGP
Trigger: GGGCCCTCCTGCCCGAAGTCATACTCTTGCTCCCAC...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCGGTCCCCAGGCCTACTaGGGCGAGAGGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCGPQAY*GERQSR
Trigger: CCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACC...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACACTGCCAACGTGCTTCTaGGGGAGGGGCCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTLPTCF*GRGPWQ
Trigger: CTGCCATGGGCCCCTCCCTCAGAAGCACGTTGGCAG...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCCTGCCAACGTGCTTCTaGGGGAGGGGCCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SKRGAGTSREALGNGFFSLPTCF*GRGPWQ
Trigger: CTGCCATGGGCCCCTCCCTCAGAAGCACGTTGGCAG...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCAAGGCGCTAGGGTTCTaGTCGGCCTCCTGCCAACGT +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESKALGF*SASCQR
Trigger: ACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTT...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTACGGCTGCGCTGGAGTaGAGCTTGGGCGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALTAALE*SLGEEA
Trigger: TGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGT...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGTCCTTCTTGAGCCGGTaGACGGCTGCGCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRSFLSR*TAALEC
Trigger: GCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGA...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CTGGGGCCTAGCACCCAATGCATGTATGAACCCACGGACAAACACAGCGAGTGGCAGGCGGTGCCCGCTTaGTGGTGGCTGCCGACTCGG +
Preference number: 4 (lower is better)
Translates to: LGPSTQCMYEPTDKHSEWQAVPA*WWLPTR
Trigger: CCGAGTCGGCAGCCACCAGCAAGCGGGCACCGCCTG...CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCACTTGCTCGCCCCAATaGTGCCACCGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCTCSPQ*CHRPQR
Trigger: CCGCTGGGGGCGGTGGCAGCATTGGGGCGAGCAAGT...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGCCAGGCGCACCCTCTaGCAGTTCCTCCCACCGTTG +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNARRTL*QFLPPL
Trigger: CAACGGTGGGAGGAACTGGCAGAGGGTGCGCCTGGC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTTGCCACTGGCACGGGTaGCTCAGCTCCCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALCHWHG*LSSQAA
Trigger: TGCTGCCTGGGAGCTGAGGCACCCGTGCCAGTGGCA...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAAGGGAGGCCGATCCGTaGAAGTGTGTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPREADP*KCVGGG
Trigger: CCCGCCTCCCACACACTTGCACGGATCGGCCTCCCT...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCCATCCCTGGGTCAACACCGAGCCATTTGAGACAAGCAAAGCACAGGGAGAGCCAGCTGGGGGCGGATaGGCTCACGGTCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PHPWVNTEPFETSKAQGEPAGGG*AHGLGE
Trigger: CTCCCCGAGACCGTGAGCCCATCCGCCCCCAGCTGG...CTCTCCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGACCCAGGGATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCGTGCCCGCTTGCTGGTaGCTGCCGACTCGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSVPACW*LPTREG
Trigger: TCCCTCCCGAGTCGGCAGCCACCAGCAAGCGGGCAC...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGAGAACACAGACCCTCTaGTCTCCCCTTTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: THPRSHPLGPPWALPTSRRTQTL*SPLCLP
Trigger: AGGCAGGCAAAGGGGAGACCAGAGGGTCTGTGTTCT...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAAGCTCCAGCCACGCCTaGAACACGCCACCCACGCAC +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPSSSHA*NTPPTH
Trigger: GTGCGTGGGTGGCGTGTTCCAGGCGTGGCTGGAGCT...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACAGCTAGGGCCACGCTGTaGGCCCTGGCAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTARATL*ALAGRL
Trigger: CAATCTCCCTGCCAGGGCCCACAGCGTGGCCCTAGC...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCGTTCGAAGGCTGCAATaGGCCGCGAGTCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCVRRLQ*AASPGC
Trigger: ACATCCTGGACTCGCGGCTCATTGCAGCCTTCGAAC...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACCACATTGGAGCAGGGTaGCATCTCGGGGCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNHIGAG*HLGAPV
Trigger: GACTGGCGCCCCGAGATGTCACCCTGCTCCAATGTG...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTCACCATGATGTGAAGTaGAGGTCCGACAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: HLKAVCLVPLHAPRLARAHHDVK*RSDRLG
Trigger: GCCCAACCTGTCGGACCTTCACTTCACATCATGGTG...AGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGGGGGCCCATGGAGGCTaGTCTCCCAAGGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRGAHGG*SPKGGR
Trigger: TCGGCCTCCCTTGGGAGATCAGCCTCCATGGGCCCC...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAGCCGCATTCCCCCAGTaGAGCAGCTGCGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPAAFPQ*SSCASP
Trigger: TGGAGAAGCGCAGCTGCTTCACTGGGGGAATGCGGC...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGAGACCCGCTCGCCCACTaGAGACAGCTCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGDPLAH*RQLHLA
Trigger: AGCAAGATGGAGCTGTCTGCAGTGGGCGAGCGGGTC...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGAGCCGGTGCACGGCTaGGCTGGAGTGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALEPVHG*AGVQLG
Trigger: CCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTTCCTTCTTGAGCCGGTaGACGGCTGCGCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALSFLSR*TAALEC
Trigger: GCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGA...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGTGTGACCTCAGGCGGTaGCCGCTTGCTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLCDLRR*PLAGGC
Trigger: GCAGCCACCAGCAAGCGGGCACCGCCTGAGGTCACA...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CTGGGGCCTAGCACCCAATGCATGTATGAACCCACGGACAAACACAGCGAGTGGACTTGCTCGCCCCAATaGTGCCACCGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGPSTQCMYEPTDKHSEWTCSPQ*CHRPQR
Trigger: CCGCTGGGGGCGGTGGCAGCATTGGGGCGAGCAAGT...CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTAGGAACTGTAAAGGGTaGCACCCGGCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALRNCKG*HPAAWG
Trigger: GCCCCAGGCTGCCGGGTGGCACCCTTTACAGTTCCT...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAAGGAACTGTAAAGGGTaGCACCCGGCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPRNCKG*HPAAWG
Trigger: GCCCCAGGCTGCCGGGTGGCACCCTTTACAGTTCCT...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACACACGGGAGCCTCCTTTaGTTCAGGCAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTHGSLL*FRQAGL
Trigger: CAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTG...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCTCCCCTTTGCCTGCCTaGCCTCCCAGGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGKWKAARVDEGPMEADLSPLPA*PPRAWP
Trigger: AGGCCAGGCCCTGGGAGGGCAGGCAGGCAAAGGGGA...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CATCCTGGTGACCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTTCCCACAGTGCCTGCGATaGCAGGGGACCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HPGDRQQEMSRGDPLLEFPQCLR*QGTCQL
Trigger: CAGCTGGCAGGTCCCCTGGCATCGCAGGCACTGTGG...GAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGAAGGCGGTGTGCCTGGTaGCTCTTCATGCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGRRCAW*LFMHQG
Trigger: GCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCT...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp ATGGAGGCTGATCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGTGGGAGGCGGGTGGGTCCCCTCTTCTTaGGCCCATACAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: MEADLPREADPCKCVGGGWVPSS*AHTAHA
Trigger: AGCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCA...CCCGCCTCCCACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCTGCCCCCAGCACACCTaGGCCAGGAGGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGCPQHT*ARRGGL
Trigger: CAGGCCTCCCCTCCTGGCCCAGGTGTGCTGGGGGCA...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACCCACGCTGTGGGCCCTaGCAGGGAGATTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNPRCGP*QGDWEG
Trigger: TCCTTCCCAATCTCCCTGCCAGGGCCCACAGCGTGG...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCGTGGTGGGGACCAGATaGCCCAACAACTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESVVGTR*PNNWER
Trigger: CCTTTCCCAGTTGTTGGGCCATCTGGTCCCCACCAC...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCGGGGATGTGTCCTCTTaGGTCCCCATAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCGDVSS*VPIGQR
Trigger: TCTCTGGCCTATGGGGACCCAAGAGGACACATCCCC...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CAA 72 bp GGGAAACAGAAGCTGCCCAGGACACGGGAGCCTCCTTaGCTTCAGGCAGGCTGGGCTGTGAGAAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GKQKLPRTREPP*LQAGWAVRKPP
Trigger: CGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGTCCTGGGCAGCTTCTGTTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 72 bp GACCTGCAGCTTGGGTTAGCTCCCGGGGGCCCGCTGTaGTCCTTCCCTTTGAGCAAGCACGGGTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: DLQLGLAPGGPL*SFPLSKHGCGD
Trigger: ATCTCCACACCCGTGCTTGCTCAAAGGGAAGGACAACAGCGGGCCCCCGGGAGCTAACCCAAGCTGCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCCCCAAGTGCTGTACTTaGTCGCCCACCCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESPKCCT*SPTPSI
Trigger: AATGGAAGGGGTGGGCGATCAAGTACAGCACTTGGG...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGACCTTCAGGTTCAGGATaGTGCGGTTCCGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGPSGSG*CGSAWA
Trigger: AGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGG...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCGCAGGACGCTCTCGCTaGACTTCTTGCTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCAGRSR*TSCSCL
Trigger: TAGGCAAGAGCAAGAAGTTCAGCGAGAGCGTCCTGC...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCAGTGGGAGCAAGAGTATaGCTTCGGGCAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RDTRPHRFPMILGWGGGAVGARV*LRAGGP
Trigger: GGGCCCTCCTGCCCGAAGTCATACTCTTGCTCCCAC...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTAGAAATGCACATCACTaGTGCGGAGGGCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASRNAHH*CGGPRP
Trigger: AGGCCGAGGCCCTCCGCATCAGTGATGTGCATTTCT...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCCAGACAGCTCCATCTTaGTCAGCGGCACCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLQTAPS*SAAPTA
Trigger: GGCTGTGGGTGCCGCTGAGCAAGATGGAGCTGTCTG...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCGACCCGCTCGCCCACTaGAGACAGCTCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: SKRGAGTSREALGNGFFSDPLAH*RQLHLA
Trigger: AGCAAGATGGAGCTGTCTGCAGTGGGCGAGCGGGTC...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCACGGCTGCGCTGGAGTaGAGCTTGGGCGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGKWKAARVDEGPMEADLTAALE*SLGEEA
Trigger: TGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGT...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTATGTGACCTCAGGCGGTaGCCGCTTGCTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALCDLRR*PLAGGC
Trigger: GCAGCCACCAGCAAGCGGGCACCGCCTGAGGTCACA...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGCTCTGCCTGGGACTTTaGCAAACAGGCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRLCLGL*QTGRKP
Trigger: GGGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAG...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCGGGCCTAGCACCCAATaGATGTATGAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESGPSTQ*MYEPTD
Trigger: GTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCC...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCAGTCCAGGCCTTCAATaGCCCTGTTCAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: TPGTRHPRTMETREVAQGSPGLQ*PCSKEL
Trigger: CAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACT...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCTCCCCTTTGCCTGCCTaGCCTCCCAGGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGSPLPA*PPRAWP
Trigger: AGGCCAGGCCCTGGGAGGGCAGGCAGGCAAAGGGGA...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGAAGGGGCCCAGCTTCTTaGCTCCTGAAGCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGRGPAS*LLKPAS
Trigger: GGATGCAGGCTTCAGGAGGCAAGAAGCTGGGCCCCT...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAAAGGCTGGCCCGGGCTaGTCCACTTGGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALKAGPG*STWSSG
Trigger: GCCTGAGCTCCAAGTGGAGCAGCCCGGGCCAGCCTT...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTTCGAGGCCAGTCTTGTaGTGGCTCCAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLSRPVL*WLQGLG
Trigger: GCCCAGGCCCTGGAGCCAGCACAAGACTGGCCTCGA...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCGGCGGGACATACGGTaGCAGCGGCGGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLRRDIR*QRRMSF
Trigger: GAAGGACATCCGCCGCTGCCACCGTATGTCCCGCCG...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTACCCAGCCCCATCCCTaGGTCAACACCGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASTQPHP*VNTEPF
Trigger: AAATGGCTCGGTGTTGACCCAGGGATGGGGCTGGGT...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCAGTGGGCTACCATGCATaGGCAGGGGGTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RDTRPHRFPMILGWGGGAVGYHA*AGGVPF
Trigger: GAAGGGCACACCCCCTGCCCATGCATGGTAGCCCAC...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCTGTGTCCACCCTCGGTaGGGGGCTCCTAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGCVHPR*GAPKGP
Trigger: GGGGCCCTTAGGAGCCCCCCACCGAGGGTGGACACA...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTAAGCAAAAGAGGGGCTaGGACAAGCCGGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALKQKRG*DKPGGP
Trigger: AGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTT...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCCCACGCTGTGGGCCCTaGCAGGGAGATTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCPRCGP*QGDWEG
Trigger: TCCTTCCCAATCTCCCTGCCAGGGCCCACAGCGTGG...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCGCTAGGGCCACGCTGTaGGCCCTGGCAGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: LGKWKAARVDEGPMEADLARATL*ALAGRL
Trigger: CAATCTCCCTGCCAGGGCCCACAGCGTGGCCCTAGC...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACGGGTGTGGAGATCTaGGTCCAGGCCCTCTCCACA +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNTGVEI*VQALST
Trigger: TGTGGAGAGGGCCTGGACCCAGATCTCCACACCCGT...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGGTCTCCCCCATAGGGTaGCGGTGGTGGGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLVSPIG*RWWGPD
Trigger: ATCTGGTCCCCACCACCGCCACCCTATGGGGGAGAC...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCGGGCTGCTCCACTTaGAGCTCAGGCCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLPGCST*SSGQQK
Trigger: CTTCTGCTGGCCTGAGCTCCAAGTGGAGCAGCCCGG...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGTTCATGCACCAAGGCTaGCCCGGGCTGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVFMHQG*PGLLHL
Trigger: CAAGTGGAGCAGCCCGGGCCAGCCTTGGTGCATGAA...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp ATGGAGGCTGATCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGTGGGAGGCGGGGTTTCCTATGATACTTaGGTGGGGAGGGGGCGCACT +
Preference number: 4 (lower is better)
Translates to: MEADLPREADPCKCVGGGVSYDT*VGRGRT
Trigger: AGTGCGCCCCCTCCCCACCCAAGTATCATAGGAAAC...CCCGCCTCCCACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGCACCCAGACAGGGATaGGTCCCAACTTACCGTCTC +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASAPRQG*VPTYRL
Trigger: GAGACGGTAAGTTGGGACCCATCCCTGTCTGGGTGC...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCAGCAGTCCAGCCCCCTaGCCAACCCAGCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSSSPAP*PTQLPV
Trigger: AACAGGGAGCTGGGTTGGCCAGGGGGCTGGACTGCT...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGACCTTGGGCAAGTGCATaGGAGCCCGGAAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGPWASA*EPGSGT
Trigger: AGTTCCACTTCCGGGCTCCCATGCACTTGCCCAAGG...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAAAGAGGCCGCCTTaGGCAAGTGCATGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLPKRPP*ASAWEP
Trigger: GGGCTCCCATGCACTTGCCCAAGGCGGCCTCTTTGG...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTCCGCCGAATCCAGAATaGAGCCCAAACCCACACCCC +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALPPNPE*SPNPHP
Trigger: GGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCCCTTCAGGTTCAGGATaGTGCGGTTCCGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SKRGAGTSREALGNGFFSPSGSG*CGSAWA
Trigger: AGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGG...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCCAACACCGAGCCATTTaGGACAAGCAAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESQHRAI*DKQSTG
Trigger: CCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTG...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCGCCTCCGCCCCATCCTaGCATTGCCACCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: LGKWKAARVDEGPMEADLASAPS*HCHLTC
Trigger: ACAGGTGAGGTGGCAATGTCAGGATGGGGCGGAGGC...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCAACTGGGCAGCTGCTCTaGCACCAGCAGCGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RDTRPHRFPMILGWGGGATGQLL*HQQRFL
Trigger: CAGAAAGCGCTGCTGGTGTCAGAGCAGCTGCCCAGT...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp ATGGAGGCTGATCTCCCAAGGGAGGCCGATCCGTGCAAGTGTGTGGGAGGCGGGCTCTCTTTGCCTGGCTaGCTACCTGCATACAGTAGG +
Preference number: 4 (lower is better)
Translates to: MEADLPREADPCKCVGGGLSLPG*LPAYSR
Trigger: CCTACTGTATGCAGGTAGTCAGCCAGGCAAAGAGAG...CCCGCCTCCCACACACTTGCACGGATCGGCCTCCCTTGGGAGATCAGCCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp AGCAAGGGCAGCCGGAACGCTTCGCTCCAGCTACCCGGCCTCCCGCAAGAGGGTCCCCTTTCCTGGCGTTaGTACAATATTGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SKGSRNASLQLPGLPQEGPLSWR*YNIEEQ
Trigger: CTGCTCTTCAATATTGTATCAACGCCAGGAAAGGGG...ACCCTCTTGCGGGAGGCCGGGTAGCTGGAGCGAAGCGTTCCGGCTGCCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAAGGAAGCCCTCCTCCTaGCTAGGCATCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPRKPSS*LGICRK
Trigger: CTTCCTGCAGATGCCTAGGCAGGAGGAGGGCTTCCT...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCAGGGCCTGGGCCCTaGCTTTTAAAGGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVPGPGP*LLKGFS
Trigger: GGAAAAGCCCTTTAAAAGGCAGGGCCCAGGCCCTGG...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCGCCGCCTTGGGCAAGTaGATGGGAGCCCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGAALGK*MGARKW
Trigger: CCACTTCCGGGCTCCCATGCACTTGCCCAAGGCGGC...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCCGGCGGGACATACGGTaGCAGCGGCGGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGRRDIR*QRRMSF
Trigger: GAAGGACATCCGCCGCTGCCACCGTATGTCCCGCCG...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGCCGAGAAGGGCGAAATaGGCGGGCGCAGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELPRRAK*AGAVRG
Trigger: GCCCCGGACTGCGCCCGCCCATTTCGCCCTTCTCGG...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGCGCCGAACTTCATGTaGCGGATCTGTGTACGCAGG +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNAPNFM*RICVRR
Trigger: CCTGCGTACACAGATCCGCCACATGAAGTTCGGCGC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGCCAGCTGGGGGCGGATaGGCTCACGGTCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRPAGGG*AHGLGE
Trigger: CTCCCCGAGACCGTGAGCCCATCCGCCCCCAGCTGG...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGGCGGTGCCCGCTTGCTaGTGGCTGCCGACTCGGGAG +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELAVPAC*WLPTRE
Trigger: CTCCCGAGTCGGCAGCCACCAGCAAGCGGGCACCGC...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGGGGCAAGGGTGGGGTaGGAGCAAGAGTATGACTTC +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNGARVG*EQEYDF
Trigger: GAAGTCATACTCTTGCTCCCACCCCACCCTTGCCCC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTACCCAGCCCCATCCCTaGGTCAACACCGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALTQPHP*VNTEPF
Trigger: AAATGGCTCGGTGTTGACCCAGGGATGGGGCTGGGT...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCAGAAACCACCCAGTaGGCTACCATGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVPETTQ*ATMHGQ
Trigger: CTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGG...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp ATGCCCTGGCTGATGTGGAGGGAGGAGCCGAGTCAGGCCTCATCCTTGGCCTCTGGGCAGACGCACAACTaGAAGTTTCCACGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: MPWLMWREEPSQASSLASGQTHN*KFPRQV
Trigger: AACCTGCCGTGGAAACTTCCAGTTGTGCGTCTGCCC...AGAGGCCAAGGATGAGGCCTGACTCGGCTCCTCCCTCCACATCAGCCAGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTACTCCAGACCCAAGCCTaGTCCCCAGGCCTACTGAGG +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALLQTQA*SPGLLR
Trigger: CCTCAGTAGGCCTGGGGACCAGGCTTGGGTCTGGAG...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCGAAGGTCCGACAGGTTaGGCTGACCACCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCEGPTG*ADHPEE
Trigger: CTCCTCAGGGTGGTCAGCCCAACCTGTCGGACCTTC...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCAAGCAAAAGAGGGGCTaGGACAAGCCGGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCKQKRG*DKPGGP
Trigger: AGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTT...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCACACCCTCATTCTCCTaGAGAACACAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESTPSFS*RTQTLW
Trigger: CCAGAGGGTCTGTGTTCTCCAGGAGAATGAGGGTGT...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCGAAGCAGACCACCTGTaGCAAGGGAAATGCATTCCC +
Preference number: 4 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCEADHL*QGKCIP
Trigger: GGGAATGCATTTCCCTTGCCACAGGTGGTCTGCTTC...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAATCCGTGCAAGTGTGTaGGAGGCGGGGGTACTAGAG +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPIRASV*EAGVLE
Trigger: CTCTAGTACCCCCGCCTCCCACACACTTGCACGGAT...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGAATGACACAGAAGAGTaGGCAAAAGGGGGATGTGTC +
Preference number: 4 (lower is better)
Translates to: THPRSHPLGPPWALPTSRNDTEE*AKGGCV
Trigger: GACACATCCCCCTTTTGCCCACTCTTCTGTGTCATT...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACCCCAAGTGCTGTACTTaGTCGCCCACCCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNPKCCT*SPTPSI
Trigger: AATGGAAGGGGTGGGCGATCAAGTACAGCACTTGGG...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGATCTCGGTCCCCACCATaGTGTGAAGTGAAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGSRSPP*CEVKVR
Trigger: TCGGACCTTCACTTCACATCATGGTGGGGACCGAGA...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCACACTGGCGCTCGGCTTaGCAGAGAAATGCACATCAC +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPHWRSA*QRNAHH
Trigger: GTGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGTG...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGACAGCTTCTTGCCTCCTaGAGCCTGCATCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRQLLAS*SLHPLS
Trigger: TGAAAGGGGATGCAGGCTTCAGGAGGCAAGAAGCTG...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CATCCTGGTGACCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTTCCTCACCGGTTTCCTATaGTACTTGGGTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HPGDRQQEMSRGDPLLEFLTGFL*YLGGEG
Trigger: CCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAG...GAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCACTTTTGTTCGAAGGCTaGAATGAGCCGCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSLLFEG*NEPRVQ
Trigger: CTGGACTCGCGGCTCATTGCAGCCTTCGAACAAAAG...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCCGGAGGAGCCAGAGCTaGGGGCGTCGTAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKARRSQS*GRRRGR
Trigger: CCGCCCCCTACGACGCCCGCAGCTCTGGCTCCTCCG...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGGGCCTAGCACCCAATaGATGTATGAACCCACGGAC +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNGPSTQ*MYEPTD
Trigger: GTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGGAGGGAAACAGAAGCTaGCCAGGACACGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSRPSMPLFKGTVKGATREGNRS*PGHGSL
Trigger: GAGGCTCCCGTGTCCTGGGCAGCTTCTGTTTCCCTC...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCGAGGGAAACAGAAGCTaGCCAGGACACGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGKWKAARVDEGPMEADLEGNRS*PGHGSL
Trigger: GAGGCTCCCGTGTCCTGGGCAGCTTCTGTTTCCCTC...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CCCCATCCCTGGGTCAACACCGAGCCATTTGAGACAAGCAAAGCACAGGGAGAGCTGGTACTGGGCAGCTaGTCTGACACCAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PHPWVNTEPFETSKAQGELVLGS*SDTSSA
Trigger: AGCGCTGCTGGTGTCAGAGCAGCTGCCCAGTACCAG...CTCTCCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGACCCAGGGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCCCAGAAACCACCCAGTaGGCTACCATGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSPETTQ*ATMHGQ
Trigger: CTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGG...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTCAACTTCTGATGCCCTaGCTGATGTGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALQLLMP*LMWREE
Trigger: CTCCTCCCTCCACATCAGCCAGGGCATCAGAAGTTG...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGGATGCGGGGAGGCTGTaGCCAGGCGCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGDAGRL*PGAPSA
Trigger: GGCAGAGGGTGCGCCTGGCCACAGCCTCCCCGCATC...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCAGAGGAAGAGGGAGCTTaGAATGGGGTCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPEEEGA*NGVSLS
Trigger: AGAGAGGGAGACCCCATTCCAAGCTCCCTCTTCCTC...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGAGGAAACACCTGTAACTaGCACCCAGGTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: VVRSKRGAGTSREALGNGGNTCN*HPGGHS
Trigger: TGAGTGACCACCTGGGTGCCAGTTACAGGTGTTTCC...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCACACTCACCAGCCCCCTaGAGAAAATCACCAGTGACA +
Preference number: 4 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSHSPAP*RKSPVT
Trigger: TGTCACTGGTGATTTTCTCCAGGGGGCTGGTGAGTG...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGTTCGAAGGCTGCAATaGGCCGCGAGTCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALVRRLQ*AASPGC
Trigger: ACATCCTGGACTCGCGGCTCATTGCAGCCTTCGAAC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCGCTGGAGTGAGGCACTaGCTCCTCCAAAGATTGCAG +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCAGVRH*LLQRLQ
Trigger: CTGCAATCTTTGGAGGAGTCAGTGCCTCACTCCAGC...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCTCCTGCCTAGGCATCTaGAGGAAGGAAAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: SKRGAGTSREALGNGFFSSCLGI*RKERDC
Trigger: ACAGTCCCTTTCCTTCCTGCAGATGCCTAGGCAGGA...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGAGTCCAGGCCTTCAATaGCCCTGTTCAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRSPGLQ*PCSKEL
Trigger: CAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACT...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGAGGCCCTCTCCACAGTaGCTGCGATGCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELRPSPQ*LRCQGT
Trigger: GGTCCCCTGGCATCGCAGGCACTGTGGAGAGGGCCT...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTACACCTCAAGGCGGTGTaGCTGGTGCCTCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALHLKAV*LVPLHA
Trigger: TGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTG...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGTGGGTCCCCTCTTCTTaGGCCCATACAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRWVPSS*AHTAHA
Trigger: AGCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCA...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGGAAAGTTTTGGGTTTaGGTCCCCTCTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNGKFWV*VPSSWA
Trigger: GGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCGGTGCACGGCTGCGCTaGAGTGCAGCTTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPGARLR*SAAWAR
Trigger: CCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACC...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCCATCCCTGGGTCAACACCGAGCCATTTGAGACAAGCAAAGCACAGGGAGAGGAGACAGGTGGGATGTaGAAGGGGCAGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: PHPWVNTEPFETSKAQGEETGGM*KGQRNP
Trigger: AGGGTTCCTCTGCCCCTTCCACATCCCACCTGTCTC...CTCTCCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGACCCAGGGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTGAGACAGGTGGGATGTaGAAGGGGCAGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLETGGM*KGQRNP
Trigger: AGGGTTCCTCTGCCCCTTCCACATCCCACCTGTCTC...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGGACAAACACAGCGAGTaGGGCAGACGCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLDKHSE*GRRTTG
Trigger: TCCAGTTGTGCGTCTGCCCCACTCGCTGTGTTTGTC...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGTGAGAAAGCCTCCGTaGTCAGAAGCAAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNVRKPP*SEAKEG
Trigger: CCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCAC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTATTGCTTCAGGCAGGCTaGGCTGTGAGAAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALLLQAG*AVRKPP
Trigger: CGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAA...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp TTCTGCTTGGTAATTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATTGTGGCCTCTGCCACTaGCACGGGTGCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FCLVIRQMESSKGGRGAHCGLCH*HGCLSS
Trigger: GGAGCTGAGGCACCCGTGCCAGTGGCAGAGGCCACA...ATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAATTACCAAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGCCCATCTTTGACCACTaGAGGCAAAGTTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRPIFDH*RQSLAS
Trigger: GCTGGCTAAACTTTGCCTCCAGTGGTCAAAGATGGG...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTGGCGGATGTCCTTCTTaGGCCGGTGCACGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGGGCPS*AGARLR
Trigger: GCGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCC...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CTGGGGCCTAGCACCCAATGCATGTATGAACCCACGGACAAACACAGCGAGTGGGCAGGACGCTCTCGCTaGACTTCTTGCTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: LGPSTQCMYEPTDKHSEWAGRSR*TSCSCL
Trigger: TAGGCAAGAGCAAGAAGTTCAGCGAGAGCGTCCTGC...CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp AGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGTGGGGAGGGGGCGCACAACACCGAGCCATTTaGGACAAGCAAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RDTRPHRFPMILGWGGGAQHRAI*DKQSTG
Trigger: CCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTG...TGCGCCCCCTCCCCACCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CTGGGGCCTAGCACCCAATGCATGTATGAACCCACGGACAAACACAGCGAGTGGGTCCCCACCATGATGTaGAGTGAAGGTCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: LGPSTQCMYEPTDKHSEWVPTMM*SEGPTG
Trigger: ACCTGTCGGACCTTCACTTCACATCATGGTGGGGAC...CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCTGTTGTCCTTCCCTTTaGGCAAGCACGGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGKWKAARVDEGPMEADLCCPSL*ASTGVE
Trigger: CTCCACACCCGTGCTTGCTCAAAGGGAAGGACAACA...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGACCCCTTTGCAGGGTaGGAACAAAGAGGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALDPFAG*EQRGVV
Trigger: CACAACCCCTCTTTGTTCTCACCCTGCAAAGGGGTC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACCTGTCCACCTCACACTaGAGTTGGGGACTTGATCAT +
Preference number: 4 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNLSTSH*SWGLDH
Trigger: ATGATCAAGTCCCCAACTTCAGTGTGAGGTGGACAG...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTGAGCCGGTGCACGGCTaGGCTGGAGTGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGEPVHG*AGVQLG
Trigger: CCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTC...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp TTCTGCTTGGTAATTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATCACGGGAGCCTCCTTTaGTTCAGGCAGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FCLVIRQMESSKGGRGAHHGSLL*FRQAGL
Trigger: CAGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTG...ATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAATTACCAAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTGGTGCACGGCTGCGCTaGAGTGCAGCTTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGGARLR*SAAWAR
Trigger: CCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACC...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGGTGGGCTACCATGCATaGGCAGGGGGTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELVGYHA*AGGVPF
Trigger: GAAGGGCACACCCCCTGCCCATGCATGGTAGCCCAC...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCCATCCCTGGGTCAACACCGAGCCATTTGAGACAAGCAAAGCACAGGGAGAGGGGCAGACGCACAACTaGAAGTTTCCACGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PHPWVNTEPFETSKAQGEGQTHN*KFPRQV
Trigger: AACCTGCCGTGGAAACTTCCAGTTGTGCGTCTGCCC...CTCTCCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGACCCAGGGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCAGAGGGAGCTTGGAATaGGGTCTCCCTCTCTATCTC +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCRGSLE*GLPLYL
Trigger: GAGATAGAGAGGGAGACCCCATTCCAAGCTCCCTCT...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAAGAACACAGACCCTCTaGTCTCCCCTTTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALRTQTL*SPLCLP
Trigger: AGGCAGGCAAAGGGGAGACCAGAGGGTCTGTGTTCT...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGAAGCCAATTGGCACTTaGACGGCCACAAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVKPIGT*TATKPT
Trigger: TGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTT...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCGGGCGAAAAGCCAATTaGCACTTGGACGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: PILRTKGARVLIGLLPTCGRKAN*HLDGHK
Trigger: TTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCC...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCGGGCGAAAAGCCAATTaGCACTTGGACGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSGRKAN*HLDGHK
Trigger: TTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCC...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGTAGGCACTCACTGCTaGAGTGAGGCACTGACTCCT +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALVGTHC*SEALTP
Trigger: AGGAGTCAGTGCCTCACTCCAGCAGTGAGTGCCTAC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCGTCCCCACCATGATGTaGAGTGAAGGTCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGVPTMM*SEGPTG
Trigger: ACCTGTCGGACCTTCACTTCACATCATGGTGGGGAC...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGATTTCTGCATCCTGGTaGCCGTCAGCAAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: RQPPILRTKGARVLIGLLISASW*PSARDE
Trigger: CTCATCTCTTGCTGACGGTCACCAGGATGCAGAAAT...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCATTGCCACCTCACCTGTaGAATCACTGCGTTACTATT +
Preference number: 4 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSLPPHL*NHCVTI
Trigger: AATAGTAACGCAGTGATTGCACAGGTGAGGTGGCAA...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp ATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCTTTGCAGGGTGAGAACAAAGGCCCCCATGGGCACTaGCCACCTCAAGGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: IGRMRLILTLTPLQGENKGPHGH*PPQGGV
Trigger: CACACCGCCTTGAGGTGGGCAGTGCCCATGGGGGCC...TTTGTTCTCACCCTGCAAAGGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGAACCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTACAGTAGGCACTCACTaGTGGAGTGAGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: GTAESRMEPKPTPPTKRLTVGTH*WSEALT
Trigger: AGTCAGTGCCTCACTCCAGCAGTGAGTGCCTACTGT...AAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCGAGGAAGAGGGAGCTTaGAATGGGGTCTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGEEEGA*NGVSLS
Trigger: AGAGAGGGAGACCCCATTCCAAGCTCCCTCTTCCTC...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CTGGGGCCTAGCACCCAATGCATGTATGAACCCACGGACAAACACAGCGAGTGGACACCCTCATTCTCCTaGAGAACACAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGPSTQCMYEPTDKHSEWTPSFS*RTQTLW
Trigger: CCAGAGGGTCTGTGTTCTCCAGGAGAATGAGGGTGT...CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTAGCTCCAGCCACGCCTaGAACACGCCACCCACGCAC +
Preference number: 4 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGSSSHA*NTPPTH
Trigger: GTGCGTGGGTGGCGTGTTCCAGGCGTGGCTGGAGCT...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCGGGAGGGGGCATCTTTaGCCCCCACTAACCATCTCC +
Preference number: 4 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAGRGHL*PPLTIS
Trigger: GGAGATGGTTAGTGGGGGCCAAAGATGCCCCCTCCC...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGGGAACCACGAAGGCCTaGGAGGGGGCATCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGGTTKA*EGASLA
Trigger: GGCCAAAGATGCCCCCTCCCAGGCCTTCGTGGTTCC...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGACTCTTTTCCCATCTTTaGCCACTGGAGGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGLFSHL*PLEAKF
Trigger: AAACTTTGCCTCCAGTGGTCAAAGATGGGAAAAGAG...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGTCACCAGGTACTCGATaGGTCCCTTTCGGATCCGCC +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELSPGTR*VPFGSA
Trigger: GGCGGATCCGAAAGGGACGCATCGAGTACCTGGTGA...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCTGGAGCCCCCTCACTTaGTCGCCCCAATGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKAWSPLT*SPQCCH
Trigger: GTGGCAGCATTGGGGCGAGCAAGTGAGGGGGCTCCA...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGGAGGCCCTCGGGAATaGATTCTTCAGCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRGGPRE*ILQHPP
Trigger: GGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCC...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCGGAGGCCCTCGGGAATaGATTCTTCAGCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAGGPRE*ILQHPP
Trigger: GGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCC...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGTTGCTTCAGGCAGGCTaGGCTGTGAGAAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELLLQAG*AVRKPP
Trigger: CGGAGGCTTTCTCACAGCCCAGCCTGCCTGAAGCAA...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 72 bp TACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTaGGACGGCCACAAAGCCAACACACAGGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: YQPLFGRKANWH*DGHKANTQGRV
Trigger: TACCCTGCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCCACCATGATGTGAAGTaGAGGTCCGACAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAHHDVK*RSDRLG
Trigger: GCCCAACCTGTCGGACCTTCACTTCACATCATGGTG...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGGAGAAAATCACCAGTaGCAACCCCCACCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRGENHQ*QPPPSQ
Trigger: TTGGGAGGGTGGGGGTTGTCACTGGTGATTTTCTCC...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACCAGCAGCGCTTTCTaGAGAGGGCTTGCTACCCAA +
Preference number: 4 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTATSSAF*RGLATQ
Trigger: TTGGGTAGCAAGCCCTCTTCAGAAAGCGCTGCTGGT...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCCTGAAGTTGGGGACTTaGTCATCACCTCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FGRKANWHLDGHKANTQGLKLGT*SSPLPR
Trigger: TCTGGGAAGAGGTGATGATCAAGTCCCCAACTTCAG...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp GGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCCCATTTCTGAAGAGGGCTTaGTACCCAATACACCCATTT +
Preference number: 4 (lower is better)
Translates to: GKWKAARVDEGPMEADLPFLKRA*YPIHPF
Trigger: AAATGGGTGTATTGGGTAGCAAGCCCTCTTCAGAAA...TGGGAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGTCAGGAGGAAAGTTTTaGGTTTGGGTCCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRSGGKF*VWVPSS
Trigger: AGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGA...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGTCCTTGGCCTCTGCCTaGGACTTTGCCAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRSLASA*DFAKQA
Trigger: TGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGA...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGCAACTTCTGATGCCCTaGCTGATGTGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRQLLMP*LMWREE
Trigger: CTCCTCCCTCCACATCAGCCAGGGCATCAGAAGTTG...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CATCCTGGTGACCGTCAGCAAGAGATGAGTCGGGGAGACCCTCTCCTGGAGTTCATACCAGCCCTTATTTaGGCGAAAAGCCAATTGGCA +
Preference number: 4 (lower is better)
Translates to: HPGDRQQEMSRGDPLLEFIPALI*AKSQLA
Trigger: TGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTAT...GAACTCCAGGAGAGGGTCTCCCCGACTCATCTCTTGCTGACGGTCACCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp TTCTGCTTGGTAATTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATTCAAGGCGGTGTGCCTaGTGCCTCTTCATGCACCAA +
Preference number: 4 (lower is better)
Translates to: FCLVIRQMESSKGGRGAHSRRCA*CLFMHQ
Trigger: TTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGA...ATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAATTACCAAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGAGAGGAGATTGGGCTTTaGGGGTTATTTCACATACAA +
Preference number: 4 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRREEIGL*GLFHIQ
Trigger: TTGTATGTGAAATAACCCCCAAAGCCCAATCTCCTC...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CAA 72 bp GGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATaGGCACTTGGACGGCCACAAAGCCAACACACAGGG +
Preference number: 4 (lower is better)
Translates to: GEIPALIWAKSQ*ALGRPQSQHTG
Trigger: CCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 72 bp CACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTaGGGCGAAAAGCCAATTGGCACTTGGACGGCCACA +
Preference number: 4 (lower is better)
Translates to: HLQGQRRNTSPY*GEKPIGTWTAT
Trigger: TGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 72 bp GCTGCTCTGACACCAGCAGCGCTTTCTGAAGAGGGCTaGCTACCCAATACACCCATTTCACAGAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AALTPAALSEEG*LPNTPISQKGK
Trigger: TTTGCCCTTCTGTGAAATGGGTGTATTGGGTAGCAAGCCCTCTTCAGAAAGCGCTGCTGGTGTCAGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCGCGTTGATACAATATTaGAGAGCAGCAGAACAAACG +
Preference number: 4 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSALIQY*RAAEQT
Trigger: CGTTTGTTCTGCTGCTCTTCAATATTGTATCAACGC...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCCTTTTGTTCGAAGGCTaGAATGAGCCGCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTALLFEG*NEPRVQ
Trigger: CTGGACTCGCGGCTCATTGCAGCCTTCGAACAAAAG...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR GCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGCCATCTCCCTATTTCTaGATCCTGGTGACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELPSPYF*ILVTVS
Trigger: GCTGACGGTCACCAGGATGCAGAAATAGGGAGATGG...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTGCGCCGAACTTCATGTaGCGGATCTGTGTACGCAGG +
Preference number: 4 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGAPNFM*RICVRR
Trigger: CCTGCGTACACAGATCCGCCACATGAAGTTCGGCGC...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAATACCAGCCCTTATTTaGGCGAAAAGCCAATTGGCA +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALIPALI*AKSQLA
Trigger: TGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTAT...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCAGAAAACACATTTCTATaGTCTCTGGAAACACCTGTA +
Preference number: 4 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSENTFL*SLETPV
Trigger: TACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTC...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR TCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCGCACTTAAGGGGAGATaGCGGATGCCCCAACCAATA +
Preference number: 4 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPALKGR*RMPQPI
Trigger: TATTGGTTGGGGCATCCGTCATCTCCCCTTAAGTGC...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCTCCTGCCTAGGCATCTaGAGGAAGGAAAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPSCLGI*RKERDC
Trigger: ACAGTCCCTTTCCTTCCTGCAGATGCCTAGGCAGGA...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCGGCTTGACAGAGAAATaGACATCACTGATGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAGLTEK*TSLMRR
Trigger: CCTCCGCATCAGTGATGTGCATTTCTCTGTCAAGCC...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCGGAAAGTTTTGGGTTTaGGTCCCCTCTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPGKFWV*VPSSWA
Trigger: GGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCC...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCTCCTTGGCCTCTGCCTaGGACTTTGCCAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKASLASA*DFAKQA
Trigger: TGCCTGTTTGGCAAAGTCCCAGGCAGAGGCCAAGGA...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCGTGAGAAAGCCTCCGTaGTCAGAAGCAAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPVRKPP*SEAKEG
Trigger: CCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCAC...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTCCCCGGTCCCAATTCTaGGACCAACACCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGPRSQF*DQHPHS
Trigger: AGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGG...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 72 bp CCCCAACTCTGTCCACCTCACACTGAAGTTGGGGACTaGATCATCACCTCTTCCCAGATCATAGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PQLCPPHTEVGD*IITSSQIIGRM
Trigger: CATCCTTCCTATGATCTGGGAAGAGGTGATGATCAAGTCCCCAACTTCAGTGTGAGGTGGACAGAGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CCCCATCCCTGGGTCAACACCGAGCCATTTGAGACAAGCAAAGCACAGGGAGAGCCAGATTGCAACTTCTaGTTGGTAATTAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PHPWVNTEPFETSKAQGEPDCNF*LVIRQM
Trigger: CATTTGCCTAATTACCAAGCAGAAGTTGCAATCTGG...CTCTCCCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGACCCAGGGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR GCA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCCCGTTAGTCTCTCTTTaGCTGGCTGACTACCTGCAT +
Preference number: 4 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPPLVSL*LADYLH
Trigger: ATGCAGGTAGTCAGCCAGGCAAAGAGAGACTAACGG...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp GGAAAACACATTTCTATGGTCTCTGGAAACACCTGTAACTGGCACCCAGGTGGTGGAAACACCTGTAACTaGCACCCAGGTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: GKHISMVSGNTCNWHPGGGNTCN*HPGGHS
Trigger: TGAGTGACCACCTGGGTGCCAGTTACAGGTGTTTCC...ACCACCTGGGTGCCAGTTACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAAGCCAATTGGCACTTaGACGGCCACAAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKAKPIGT*TATKPT
Trigger: TGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTT...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CCA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGAAAACACATTTCTATaGTCTCTGGAAACACCTGTA +
Preference number: 4 (lower is better)
Translates to: GREIGKEGSLPFLGPKALENTFL*SLETPV
Trigger: TACAGGTGTTTCCAGAGACCATAGAAATGTGTTTTC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
3UTR CAA 72 bp ACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTaGACCTTGACCCCTTTGCAGGGTGAGAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: TSSQIIGRMRLI*TLTPLQGENKE
Trigger: CTCTTTGTTCTCACCCTGCAAAGGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR TCA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGACCAAAACAACAAAATaGCACAGAAGAGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELTKTTK*HRRVGK
Trigger: TTTGCCCACTCTTCTGTGTCATTTTGTTGTTTTGGT...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CCA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAACGTAGGAGGAGATTaGGCTTTGGGGGTTATTTCA +
Preference number: 4 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKANVGGD*ALGVIS
Trigger: TGAAATAACCCCCAAAGCCCAATCTCCTCCTACGTT...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
3UTR CAA 72 bp CTGGAGGCAAAGTTTAGCCAGCTGGGAGCTGGATGGTaGAACCACATACAAAGGCAACAACACTTCATTTTA +
Preference number: 4 (lower is better)
Translates to: LEAKFSQLGAGW*NHIQRQQHFIL
Trigger: TAAAATGAAGTGTTGTTGCCTTTGTATGTGGTTCAACCATCCAGCTCCCAGCTGGCTAAACTTTGCCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS TCA 90 bp CGGCGGGCTCAGGGGCCGTGGGAGGTGCCGGGCCGGCAGCAGCTGTaGCCTCAGGCGGTGCCCGCTTGCTGGTGGCTGCCGACTCGGGAG +
Preference number: 5 (lower is better)
Translates to: RRAQGPWEVPGRQQL*PQAVPACWWLPTRE
Trigger: CTCCCGAGTCGGCAGCCACCAGCAAGCGGGCACCGCCTGAGGTCACAGCTGCTGCCGGCCCGGCACCTCCCACGGCCCCTGAGCCCGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGGGGCGGGCGGAGGCTaGTACAGCGCAAAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKGAGGG*YSAKAP
Trigger: CGGCGCCTTTGCGCTGTACAAGCCTCCGCCCGCCCC...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS GCA 90 bp CGGCGGGACATACGGTGGCAGCGGCGGATGTCCTTCTTGAGCCGGTaGACGGCTGCGCTGGAGTGCAGCTTGGGCGAGGAGGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: RRDIRWQRRMSFLSR*TAALECSLGEEALA
Trigger: CGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCGCTGCCACCGTATGTCCCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTTCAGGCGGTGCCCGCTaGCTGGTGGCTGCCGACTCG +
Preference number: 5 (lower is better)
Translates to: HLKAVCLVPLHAPRLARASGGAR*LVAADS
Trigger: CGAGTCGGCAGCCACCAGCAAGCGGGCACCGCCTGA...AGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCGGCTCGAGGCCAGTCTaGTGCTGGCTCCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: TPGTRHPRTMETREVAQGGSRPV*CWLQGL
Trigger: CAGGCCCTGGAGCCAGCACAAGACTGGCCTCGAGCC...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS GCA 90 bp CATACGGTGGCAGCGGCGGATGTCCTTCTTGAGCCGGTGCACGGCTaGGCTGGAGTGCAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: HTVAAADVLLEPVHG*AGVQLGRGGTGARL
Trigger: AAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCGCTGCCACCGTATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS TCA 90 bp CAGGAGGTTGCTGGTGACATCGGTGACGACCACATTGGAGCAGGGTaGCATCTCGGGGCGCCAGTCCCCAGCCTCGGGCTCGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: QEVAGDIGDDHIGAG*HLGAPVPSLGLGGG
Trigger: GCCTCCTCCGAGCCCGAGGCTGGGGACTGGCGCCCCGAGATGTCACCCTGCTCCAATGTGGTCGTCACCGATGTCACCAGCAACCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS GCA 90 bp CAGCGGCGGATGTCCTTCTTGAGCCGGTGCACGGCTGCGCTGGAGTaGAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTTCAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: QRRMSFLSRCTAALE*SLGEEALALGFRRK
Trigger: TTTCCTCCTGAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216083.6
CDS GCA 90 bp TGCAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTTGACAGAGAAATaGACATCACTGATGCGGAGGGCCTCGGCCTGGGCCCGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: CSLGEEALALGLTEK*TSLMRRASAWARAF
Trigger: GAAGGCGCGGGCCCAGGCCGAGGCCCTCCGCATCAGTGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTGCTGAGGCCTCAGCCTaGCCGGGGGACGGGGCTACC +
Preference number: 5 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALAEASA*PGDGAT
Trigger: GGTAGCCCCGTCCCCCGGCAAGGCTGAGGCCTCAGC...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCATCAGGCGGTGCCCGCTaGCTGGTGGCTGCCGACTCG +
Preference number: 5 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSSGGAR*LVAADS
Trigger: CGAGTCGGCAGCCACCAGCAAGCGGGCACCGCCTGA...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGCTCCCAAACCTCAGCTaGCCGGGACCTGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKLPNLS*PGPAAW
Trigger: CCAAGCTGCAGGTCCCGGCAAGCTGAGGTTTGGGAG...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp CACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTCCCAAAGAGGCCGCCTaGGGCAAGTGCATGGGAGCC +
Preference number: 5 (lower is better)
Translates to: HLKAVCLVPLHAPRLARAPKEAA*GKCMGA
Trigger: GGCTCCCATGCACTTGCCCAAGGCGGCCTCTTTGGG...AGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS GCA 90 bp CAGCGGCGGATGTCCTTCTTGAGCCGGTGCACGGCTGCGCTGGAGTaGAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTTGACAGAGAAA +
Preference number: 5 (lower is better)
Translates to: QRRMSFLSRCTAALE*SLGEEALALGLTEK
Trigger: TTTCTCTGTCAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTGCGCTGGAGTGCAGCTaGGGCGAGGAGGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALALECS*GEEALA
Trigger: CGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGC...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCGCGCTGGAGTGCAGCTaGGGCGAGGAGGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: SKRGAGTSREALGNGFFSALECS*GEEALA
Trigger: CGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGC...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGCGGCGGATGTCCTTCTaGAGCCGGTGCACGGCTGCG +
Preference number: 5 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRRRMSF*SRCTAA
Trigger: CGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCG...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCGGCTTCACCTTGCGGTaGATGATGCGCACCGTCTCC +
Preference number: 5 (lower is better)
Translates to: TPGTRHPRTMETREVAQGGFTLR*MMRTVS
Trigger: GGAGACGGTGCGCATCATCAACCGCAAGGTGAAGCC...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCGCCGCCAGCGCCCTaGTCGATCACCTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCPPPAP*SITFRF
Trigger: GAACCTGAAGGTGATCGACAAGGGCGCTGGCGGCGG...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGGCTGACCCTCCAGCCTaGGGCGGGCCCACCGGCCTG +
Preference number: 5 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRADPPA*GGPTGL
Trigger: CAGGCCGGTGGGCCCGCCCAAGGCTGGAGGGTCAGC...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CCA 90 bp GGGCCTCGGCCTGGGCCCGCGCCTTCAGGAGGAAAGTTTTGGGTTTaGGTCCCCTCTTCTTGGGCCCATACAGCTCACGCTCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GPRPGPAPSGGKFWV*VPSSWAHTAHAPSP
Trigger: AGGAGAGGGAGCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGGCGCGGGCCCAGGCCGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp CACCTCAAGGCGGTGTGCCTGGTGCCTCTTCATGCACCAAGGCTGGCCCGGGCTTTGGGTCCCCTCTTCTaGGGCCCATACAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: HLKAVCLVPLHAPRLARALGPLF*GPYSSR
Trigger: GCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAA...AGCCCGGGCCAGCCTTGGTGCATGAAGAGGCACCAGGCACACCGCCTTGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGACGGCGGATGTCCTTCTaGAGCCGGTGCACGGCTGCG +
Preference number: 5 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGRRMSF*SRCTAA
Trigger: CGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCG...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGGCGGGCGGAGGCTaGTACAGCGCAAAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GREIGKEGSLPFLGPKALGAGGG*YSAKAP
Trigger: CGGCGCCTTTGCGCTGTACAAGCCTCCGCCCGCCCC...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGGCTGAGGCCTCAGCCTaGCCGGGGGACGGGGCTACC +
Preference number: 5 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRAEASA*PGDGAT
Trigger: GGTAGCCCCGTCCCCCGGCAAGGCTGAGGCCTCAGC...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGAGTGGAGCCCCCTCACTaGCTCGCCCCAATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: VVRSKRGAGTSREALGNGVEPPH*LAPMLP
Trigger: TGGCAGCATTGGGGCGAGCAAGTGAGGGGGCTCCAC...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp ACGCCTGGAACACGCCACCCACGCACAATGGAGACCCGGGAAGTGGCCCAGGGCCGCCCCATCCTGACATaGCCACCTCACCTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: TPGTRHPRTMETREVAQGRPILT*PPHLCN
Trigger: ATTGCACAGGTGAGGTGGCAATGTCAGGATGGGGCG...GCCCTGGGCCACTTCCCGGGTCTCCATTGTGCGTGGGTGGCGTGTTCCAGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS GCA 90 bp GCACTACAGGAAGACAGGGGGCCCACTGAGTCCCACCTGCAGCCGTaGCTGCCACCTAGGGCCATCTTGCCCTTCCTTTCCCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: ALQEDRGPTESHLQP*LPPRAILPFLSQTL
Trigger: CAGAGTCTGGGAAAGGAAGGGCAAGATGGCCCTAGGTGGCAGGCACGGCTGCAGGTGGGACTCAGTGGGCCCCCTGTCTTCCTGTAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCGGCTTCACCTTGCGGTaGATGATGCGCACCGTCTCC +
Preference number: 5 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESGFTLR*MMRTVS
Trigger: GGAGACGGTGCGCATCATCAACCGCAAGGTGAAGCC...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGATGATGCGGTTCCGCTaGGGCTCCCGCGGCTTCACC +
Preference number: 5 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVMMRFR*GSRGFT
Trigger: GGTGAAGCCGCGGGAGCCCAAGCGGAACCGCATCAT...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTCCGCCGCCAGCGCCCTaGTCGATCACCTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALPPPAP*SITFRF
Trigger: GAACCTGAAGGTGATCGACAAGGGCGCTGGCGGCGG...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCGTGACCGTCAGGAGGTaGCTGGTGACATCGGTGACG +
Preference number: 5 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCVTVRR*LVTSVT
Trigger: CGTCACCGATGTCACCAGCAACCTCCTGACGGTCAC...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCGTGGAGCCCCCTCACTaGCTCGCCCCAATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLVEPPH*LAPMLP
Trigger: TGGCAGCATTGGGGCGAGCAAGTGAGGGGGCTCCAC...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGACCCGGGGGCCCGCTGTaGTCCTTCCCTTTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGPGGPL*SFPLSK
Trigger: CTTGCTCAAAGGGAAGGACAACAGCGGGCCCCCGGG...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCCCCGGGCTGCTCCACTaGGAGCTCAGGCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLPGLLH*ELRPAE
Trigger: TTCTGCTGGCCTGAGCTCCAAGTGGAGCAGCCCGGG...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCTGGGAGGGGGCATCTTaGGCCCCCACTAACCATCTC +
Preference number: 5 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESWEGAS*APTNHL
Trigger: GAGATGGTTAGTGGGGGCCAAAGATGCCCCCTCCCA...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CCA 90 bp GGGGCGGGCGGAGGCTTGTACAGCGCAAAGGCGCCGAACTTCATGTaGCGGATCTGTGTACGCAGGACGCTCTCGCTGAACTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GAGGGLYSAKAPNFM*RICVRRTLSLNFLL
Trigger: GAGCAAGAAGTTCAGCGAGAGCGTCCTGCGTACACAGATCCGCCACATGAAGTTCGGCGCCTTTGCGCTGTACAAGCCTCCGCCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACACGGGAGCCTCCTTaGCTTCAGGCAGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNTREPP*LQAGWA
Trigger: AGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGT...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGAACACGGGAGCCTCCTTaGCTTCAGGCAGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGTREPP*LQAGWA
Trigger: AGCCCAGCCTGCCTGAAGCAAAGGAGGCTCCCGTGT...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGAAAGCCAATTGGCACTaGGACGGCCACAAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: THPRSHPLGPPWALPTSRKANWH*DGHKAN
Trigger: GTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTT...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCTTGGGTCCCCTCTTCTaGGGCCCATACAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLLGPLF*GPYSSR
Trigger: GCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAA...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGTCCCGCGGCTTCACCTaGCGGTTGATGATGCGCACC +
Preference number: 5 (lower is better)
Translates to: RQPPILRTKGARVLIGLLSRGFT*RLMMRT
Trigger: GGTGCGCATCATCAACCGCAAGGTGAAGCCGCGGGA...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GGGCCCCACAGCTGCCAGGTTAGCACCGAGAAATCAGACGCCGCACAGGAGAGCTGGGCGAAAAGCCAATaGGCACTTGGACGGCCACAA +
Preference number: 5 (lower is better)
Translates to: GPHSCQVSTEKSDAAQESWAKSQ*ALGRPQ
Trigger: TTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCA...GCTCTCCTGTGCGGCGTCTGATTTCTCGGTGCTAACCTGGCAGCTGTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCCAGGGGCCCAGCTTCTaGCCTCCTGAAGCCTGCATC +
Preference number: 5 (lower is better)
Translates to: PILRTKGARVLIGLLPTCQGPSF*PPEACI
Trigger: GATGCAGGCTTCAGGAGGCAAGAAGCTGGGCCCCTG...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp ACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGGCTGGGAGCTGGATGGTaGAACCACATACAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: THPRSHPLGPPWALPTSRLGAGW*NHIQRQ
Trigger: TTGCCTTTGTATGTGGTTCAACCATCCAGCTCCCAG...CCTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS GCA 90 bp TACAGGAAGACAGGGGGCCCACTGAGTCCCACCTGCAGCCGTGCCTaGCACCTAGGGCCATCTTGCCCTTCCTTTCCCAGACTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: YRKTGGPLSPTCSRA*HLGPSCPSFPRLCF
Trigger: AAAACAGAGTCTGGGAAAGGAAGGGCAAGATGGCCCTAGGTGGCAGGCACGGCTGCAGGTGGGACTCAGTGGGCCCCCTGTCTTCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp CAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACACCCGGTCCCAAGTGCTGTACTaGATCGCCCACCCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: QAGRPSGMDSSASSPNTRSQVLY*IAHPFH
Trigger: ATGGAAGGGGTGGGCGATCAAGTACAGCACTTGGGA...CCGGGTGTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CCAAGCCTGGTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCTCTCGCTGAACTTCTaGCTCTTGCCTATAACGCGG +
Preference number: 5 (lower is better)
Translates to: PSLVPRPTEARGSPGLQCLSLNF*LLPITR
Trigger: CCGCGTTATAGGCAAGAGCAAGAAGTTCAGCGAGAG...GCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGACCAGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGTCGGTGACGACCACATaGGAGCAGGGTGACATCTCG +
Preference number: 5 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVSVTTT*EQGDIS
Trigger: CGAGATGTCACCCTGCTCCAATGTGGTCGTCACCGA...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGATCGGTGACGACCACATaGGAGCAGGGTGACATCTCG +
Preference number: 5 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRSVTTT*EQGDIS
Trigger: CGAGATGTCACCCTGCTCCAATGTGGTCGTCACCGA...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGGTGACCGTCAGGAGGTaGCTGGTGACATCGGTGACG +
Preference number: 5 (lower is better)
Translates to: RQPPILRTKGARVLIGLLVTVRR*LVTSVT
Trigger: CGTCACCGATGTCACCAGCAACCTCCTGACGGTCAC...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CACTCACCCTCGGTCCCATCCACTCGGGCCCCCATGGGCACTGCCCACCTCAAGCTTTCTGAAGAGGGCTaGCTACCCAATACACCCATT +
Preference number: 5 (lower is better)
Translates to: HSPSVPSTRAPMGTAHLKLSEEG*LPNTPI
Trigger: AATGGGTGTATTGGGTAGCAAGCCCTCTTCAGAAAG...CTTGAGGTGGGCAGTGCCCATGGGGGCCCGAGTGGATGGGACCGAGGGTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CCA 90 bp CTCCTTGTGCCCTGCCAGGAGGTGGGACCCCACTCACTCTCCCCCTaGGTTCCAACTCCCAGCACAGTCATAACAGCTCAAACAAATGCC +
Preference number: 5 (lower is better)
Translates to: LLVPCQEVGPHSLSP*VPTPSTVITAQTNA
Trigger: GGCATTTGTTTGAGCTGTTATGACTGTGCTGGGAGTTGGAACCCAGGGGGAGAGTGAGTGGGGTCCCACCTCCTGGCAGGGCACAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp CCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCCAACGTGCTTTCGGATCCGCCGTTaGATGATGGATTCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: PILRTKGARVLIGLLPTCFRIRR*MMDSAA
Trigger: CGCGGCCGAATCCATCATCAAACGGCGGATCCGAAA...GCACGTTGGCAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTACCTCTGCCTGGGACTTaGCCAAACAGGCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GREIGKEGSLPFLGPKALPLPGT*PNRQEA
Trigger: GGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGG...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CCGCCGAATCCAGAATGGAGCCCAAACCCACACCCCCAACTAAGCGTCTTCTCCAGTCAGGCCTCATCCTaGGCCTCTGCCTGGGACTTT +
Preference number: 5 (lower is better)
Translates to: PPNPEWSPNPHPQLSVFSSQASS*ASAWDF
Trigger: AAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACT...GGAGAAGACGCTTAGTTGGGGGTGTGGGTTTGGGCTCCATTCTGGATTCGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGCAGTTCCTCCCACCGTaGAGGGGGTTAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RQPPILRTKGARVLIGLLQFLPP*RGLGKS
Trigger: GCTCTTTCCTAACCCCCTCAACGGTGGGAGGAACTG...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCATCCTCCCCAAACGCACTGGCGCTCGGCTaGACAGAGAAATGCACATCA +
Preference number: 5 (lower is better)
Translates to: LGQAGRPSGMDSSASSPNALALG*TEKCTS
Trigger: TGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGTGC...GTTTGGGGAGGATGCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTCTGTTGTCCTTCCCTTaGAGCAAGCACGGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALLLSFP*SKHGCG
Trigger: TCCACACCCGTGCTTGCTCAAAGGGAAGGACAACAG...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp TTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGCGGGGGATGTGTCCTCTaGGGTCCCCATAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: FGRKANWHLDGHKANTQGGGCVL*GPHRPE
Trigger: CTCTGGCCTATGGGGACCCAAGAGGACACATCCCCC...GCCCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATTCTTCAGCCTGAACTTCTTGCTCTaGCCTATAACGCGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: SKRGAGTSREALGNGFFSLNFLL*PITRFR
Trigger: GCGGAACCGCGTTATAGGCAAGAGCAAGAAGTTCAG...GCTGAAGAATCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGACTCTCGCTGAACTTCTaGCTCTTGCCTATAACGCGG +
Preference number: 5 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRLSLNF*LLPITR
Trigger: CCGCGTTATAGGCAAGAGCAAGAAGTTCAGCGAGAG...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGCCCTTGGGTTGCAGAATTCCTaGATTGTGACCGTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: AFQKPPSGLPCMGRGCALGLQNS*IVTVRR
Trigger: CCTCCTGACGGTCACAATCAAGGAATTCTGCAACCC...AAGGGCACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACAGGGTTGCAGAATTCCTaGATTGTGACCGTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTGLQNS*IVTVRR
Trigger: CCTCCTGACGGTCACAATCAAGGAATTCTGCAACCC...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GTGGTCAGAAGCAAAAGAGGGGCTGGGACAAGCCGGGAGGCCCTCGGGAATGGATCAACACCGAGCCATTaGAGACAAGCAAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: VVRSKRGAGTSREALGNGSTPSH*RQAKHR
Trigger: CCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGA...TCCATTCCCGAGGGCCTCCCGGCTTGTCCCAGCCCCTCTTTTGCTTCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CAGTCCAGGCCTTCAATGCCCCTGTTCAAAGGAACTGTAAAGGGTGCCACCCGGAGTCAGGCCTCATCCTaGGCCTCTGCCTGGGACTTT +
Preference number: 5 (lower is better)
Translates to: QSRPSMPLFKGTVKGATRSQASS*ASAWDF
Trigger: AAAGTCCCAGGCAGAGGCCAAGGATGAGGCCTGACT...CCGGGTGGCACCCTTTACAGTTCCTTTGAACAGGGGCATTGAAGGCCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTACAGTTCCTCCCACCGTaGAGGGGGTTAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: GREIGKEGSLPFLGPKALQFLPP*RGLGKS
Trigger: GCTCTTTCCTAACCCCCTCAACGGTGGGAGGAACTG...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAGGGTTCTGATCGGCCTCCTGTGGGCGAAAAGCCAATaGGCACTTGGACGGCCACAA +
Preference number: 5 (lower is better)
Translates to: RQPPILRTKGARVLIGLLWAKSQ*ALGRPQ
Trigger: TTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCA...CAGGAGGCCGATCAGAACCCTAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGGAGAACAAAGAGGGGTaGTGGGCAGCTGGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRENKEG*WAAGGP
Trigger: GGGGCCCCCAGCTGCCCACAACCCCTCTTTGTTCTC...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCAGGCTCATTTTGACCTaGACCCCTTTGCAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLRLILT*TPLQGE
Trigger: CTCACCCTGCAAAGGGGTCAAGGTCAAAATGAGCCT...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCAAGGATGAGGCTCATTTaGACCTTGACCCCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSRMRLI*TLTPLQ
Trigger: CTGCAAAGGGGTCAAGGTCAAAATGAGCCTCATCCT...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CCA 90 bp ACCATGGCCTCTCCCCATGTCTGTGGGCAAGTTACTGGACACCTCTaGCCCTGTTTCCCCATGCGTGAAACAGGGAGGATGGAAGCTATC +
Preference number: 5 (lower is better)
Translates to: TMASPHVCGQVTGHL*PCFPMRETGRMEAI
Trigger: GATAGCTTCCATCCTCCCTGTTTCACGCATGGGGAAACAGGGCCAGAGGTGTCCAGTAACTTGCCCACAGACATGGGGAGAGGCCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp TTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATGGAGGCTGATCTCTCCCAAGTGCTGTACTaGATCGCCCACCCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LGKWKAARVDEGPMEADLSQVLY*IAHPFH
Trigger: ATGGAAGGGGTGGGCGATCAAGTACAGCACTTGGGA...GAGATCAGCCTCCATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp GCACAACTGGAAGTTTCCACGGCAGGTTCTCGTAGCACCTTTGGTCAAGAACTGTCCCGCGGCTTCACCTaGCGGTTGATGATGCGCACC +
Preference number: 5 (lower is better)
Translates to: AQLEVSTAGSRSTFGQELSRGFT*RLMMRT
Trigger: GGTGCGCATCATCAACCGCAAGGTGAAGCCGCGGGA...CAGTTCTTGACCAAAGGTGCTACGAGAACCTGCCGTGGAAACTTCCAGTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCGGGGCCCCGGTCCCAATTCTGGGACCAACACCCTCATTCTCCTGGAGAACAGAACGTAGGAGGAGATaGGGCTTTGGGGGTTATTTC +
Preference number: 5 (lower is better)
Translates to: SGAPVPILGPTPSFSWRTERRRR*GFGGYF
Trigger: GAAATAACCCCCAAAGCCCAATCTCCTCCTACGTTC...TGTTCTCCAGGAGAATGAGGGTGTTGGTCCCAGAATTGGGACCGGGGCCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp CTAGGGCTTTCCAGAAACCACCCAGTGGGCTACCATGCATGGGCAGGGGGTGTGTTGACCTTGACCCCTTaGCAGGGTGAGAACAAAGAG +
Preference number: 5 (lower is better)
Translates to: LGLSRNHPVGYHAWAGGVLTLTP*QGENKE
Trigger: CTCTTTGTTCTCACCCTGCAAAGGGGTCAAGGTCAA...CACACCCCCTGCCCATGCATGGTAGCCCACTGGGTGGTTTCTGGAAAGCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AGCATCCTCCCCAAACACCCGGAGGAAGAGGGAGCTTGGAATGGGGTCTCCCTCACTGAAGTTGGGGACTaGATCATCACCTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SILPKHPEEEGAWNGVSLTEVGD*IITSSQ
Trigger: CTGGGAAGAGGTGATGATCAAGTCCCCAACTTCAGT...GAGGGAGACCCCATTCCAAGCTCCCTCTTCCTCCGGGTGTTTGGGGAGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCATGATGCGGTTCCGCTaGGGCTCCCGCGGCTTCACC +
Preference number: 5 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKAMMRFR*GSRGFT
Trigger: GGTGAAGCCGCGGGAGCCCAAGCGGAACCGCATCAT...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCCCTCTGCCTGGGACTTaGCCAAACAGGCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAPLPGT*PNRQEA
Trigger: GGCTTCCTGCCTGTTTGGCAAAGTCCCAGGCAGAGG...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp CTGGGGCCTAGCACCCAATGCATGTATGAACCCACGGACAAACACAGCGAGTGGAAAGCCAATTGGCACTaGGACGGCCACAAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: LGPSTQCMYEPTDKHSEWKANWH*DGHKAN
Trigger: GTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTT...CCACTCGCTGTGTTTGTCCGTGGGTTCATACATGCATTGGGTGCTAGGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp AACGTACAAGACAGAGTAATCGGCACAGACCCACCCCTCCCCCGGAACCGCCGAATGCCCCAACCAATATaGAACGTAGGAGGAGATTGG +
Preference number: 5 (lower is better)
Translates to: NVQDRVIGTDPPLPRNRRMPQPI*NVGGDW
Trigger: CCAATCTCCTCCTACGTTCAATATTGGTTGGGGCAT...TCGGCGGTTCCGGGGGAGGGGTGGGTCTGTGCCGATTACTCTGTCTTGTACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS GCA 90 bp CTTCCTCTGGAAGTTCTTCCCTCCCTAGCAGAGACTAATATGCTATaGTCTCACTCCCACATCCCCATCCCCCAGAAATGGCCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LPLEVLPSLAETNML*SHSHIPIPQKWPGV
Trigger: CACTCCCGGCCATTTCTGGGGGATGGGGATGTGGGAGTGAGAGCATAGCATATTAGTCTCTGCTAGGGAGGGAAGAACTTCCAGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp AGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCTTTCGGATCCGCCGTTaGATGATGGATTCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RRNTSPYLGEKPIGTWTAFRIRR*MMDSAA
Trigger: CGCGGCCGAATCCATCATCAAACGGCGGATCCGAAA...GGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGTGAGAAAGCCTCCGTGGTCAGAAGCAAAAGAGGGGCTGGGATCGAAATCCTCAGGGTaGCAGAATTCCTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: AGWAVRKPPWSEAKEGLGSKSSG*QNSLIV
Trigger: CACAATCAAGGAATTCTGCAACCCTGAGGATTTCGA...TCCCAGCCCCTCTTTTGCTTCTGACCACGGAGGCTTTCTCACAGCCCAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GTCCCCAGGCCTACTGAGGCGAGAGGCAGTCCAGGCCTTCAATGCCCCTGTTCAGGCGTTGATACAATATaGAAGAGCAGCAGAACAAAC +
Preference number: 5 (lower is better)
Translates to: VPRPTEARGSPGLQCPCSGVDTI*KSSRTN
Trigger: GTTTGTTCTGCTGCTCTTCAATATTGTATCAACGCC...TGAACAGGGGCATTGAAGGCCTGGACTGCCTCTCGCCTCAGTAGGCCTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS TCA 90 bp TGTGGGCTTGGCAAGCACCGTAGATGGTGTGAAGGTTTAAGCACCTaGACTCTACCATGGCCTCTCCCCATGTCTGTGGGCAAGTTACTG +
Preference number: 5 (lower is better)
Translates to: CGLGKHRRWCEGLST*TLPWPLPMSVGKLL
Trigger: CAGTAACTTGCCCACAGACATGGGGAGAGGCCATGGTAGAGTTCAGGTGCTTAAACCTTCACACCATCTACGGTGCTTGCCAAGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS TCA 90 bp CTGCCTTCCCCCTTTAACCTGACATGGACTACTCAAGGCACAAGATaGAGAAAAGGAGACAGGATGAAGCCAGGAAGCTGGACCTCGGGT +
Preference number: 5 (lower is better)
Translates to: LPSPFNLTWTTQGTR*RKGDRMKPGSWTSG
Trigger: ACCCGAGGTCCAGCTTCCTGGCTTCATCCTGTCTCCTTTTCTTCATCTTGTGCCTTGAGTAGTCCATGTCAGGTTAAAGGGGGAAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGACGCTCCCTCTCCTTTaGTTCGAAGGCTGCAATGAG +
Preference number: 5 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRTLPLL*FEGCNE
Trigger: CTCATTGCAGCCTTCGAACAAAAGGAGAGGGAGCGT...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGCTGAACTTCTTGCTCTaGCCTATAACGCGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRLNFLL*PITRFR
Trigger: GCGGAACCGCGTTATAGGCAAGAGCAAGAAGTTCAG...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTATCGAAATCCTCAGGGTaGCAGAATTCCTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: GREIGKEGSLPFLGPKALSKSSG*QNSLIV
Trigger: CACAATCAAGGAATTCTGCAACCCTGAGGATTTCGA...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS GCA 90 bp TTCCTGGCAGAAAGCGCTGAGTGTAATTTGCTGACTCTGCCATACTaGCTCTCAGGGAGCCCCAGAACAATGTGTTCAGCCCAAGCTAAT +
Preference number: 5 (lower is better)
Translates to: FLAESAECNLLTLPY*LSGSPRTMCSAQAN
Trigger: ATTAGCTTGGGCTGAACACATTGTTCTGGGGCTCCCTGAGAGGCAGTATGGCAGAGTCAGCAAATTACACTCAGCGCTTTCTGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS TCA 90 bp TTGCTTCAGAGTAGTTCCTGGCAGAAAGCGCTGAGTGTAATTTGCTaGCTCTGCCATACTGCCTCTCAGGGAGCCCCAGAACAATGTGTT +
Preference number: 5 (lower is better)
Translates to: LLQSSSWQKALSVIC*LCHTASQGAPEQCV
Trigger: AACACATTGTTCTGGGGCTCCCTGAGAGGCAGTATGGCAGAGTCAGCAAATTACACTCAGCGCTTTCTGCCAGGAACTACTCTGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp TATTTGGGCGAAAAGCCAATTGGCACTTGGACGGCCACAAAGCCAACACACAGGAATACCAGCCCTTATTaGGGCGAAAAGCCAATTGGC +
Preference number: 5 (lower is better)
Translates to: YLGEKPIGTWTATKPTHRNTSPY*GEKPIG
Trigger: GCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATT...CCTGTGTGTTGGCTTTGTGGCCGTCCAAGTGCCAATTGGCTTTTCGCCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp TTCTGCTTGGTAATTAGGCAAATGGAAAGCAGCAAGGGTGGACGAGGGGCCCATAATACCAGCCCTTATTaGGGCGAAAAGCCAATTGGC +
Preference number: 5 (lower is better)
Translates to: FCLVIRQMESSKGGRGAHNTSPY*GEKPIG
Trigger: GCCAATTGGCTTTTCGCCCAAATAAGGGCTGGTATT...ATGGGCCCCTCGTCCACCCTTGCTGCTTTCCATTTGCCTAATTACCAAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp AAATCACCTCCAAGGACAGAGGAGAAATACCAGCCCTTATTTGGGCGAAAAGCCTCAACACCGAGCCATTaGAGACAAGCAAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: KSPPRTEEKYQPLFGRKASTPSH*RQAKHR
Trigger: CCTGTGCTTTGCTTGTCTCAAATGGCTCGGTGTTGA...GGCTTTTCGCCCAAATAAGGGCTGGTATTTCTCCTCTGTCCTTGGAGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS-3UTR CAA 90 bp GGCAGGGAGATTGGGAAGGAAGGCAGCCTCCCATTCTTAGGACCAAAGGCGCTAATAAAGCAAACCAGATaGCAACTTCTGCTTGGTAAT +
Preference number: 5 (lower is better)
Translates to: GREIGKEGSLPFLGPKALIKQTR*QLLLGN
Trigger: ATTACCAAGCAGAAGTTGCAATCTGGTTTGCTTTAT...TAGCGCCTTTGGTCCTAAGAATGGGAGGCTGCCTTCCTTCCCAATCTCCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS-3UTR CAA 90 bp TTACCGTCTCAAACCAGAGACACCAGACCTCACCGGTTTCCTATGATACTTGGGGGAGGAGATTGGGCTTaGGGGGTTATTTCACATACA +
Preference number: 5 (lower is better)
Translates to: LPSQTRDTRPHRFPMILGGGDWA*GVISHT
Trigger: TGTATGTGAAATAACCCCCAAAGCCCAATCTCCTCC...CCCAAGTATCATAGGAAACCGGTGAGGTCTGGTGTCTCTGGTTTGAGACGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS TCA 90 bp CCTGATGAATTAAAAATAACTGTAGCCAACATGCTTATTGCACCCTaGCCAGGTGACAGGCATAGCTCTGTGGGCTTGGCAAGCACCGTA +
Preference number: 5 (lower is better)
Translates to: PDELKITVANMLIAP*PGDRHSSVGLASTV
Trigger: TACGGTGCTTGCCAAGCCCACAGAGCTATGCCTGTCACCTGGTCAGGGTGCAATAAGCATGTTGGCTACAGTTATTTTTAATTCATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS-3UTR CAA 90 bp CATCACCTCTTCCCAGATCATAGGAAGGATGAGGCTCATTTTGACCTTGACCCCGATTGCAACTTCTGCTaGGTAATTAGGCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: HHLFPDHRKDEAHFDLDPDCNFC*VIRQME
Trigger: TTCCATTTGCCTAATTACCAAGCAGAAGTTGCAATC...GGGGTCAAGGTCAAAATGAGCCTCATCCTTCCTATGATCTGGGAAGAGGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CCA 72 bp GGGTCCGGGCGGGGCAGGGGACGGCGGGACATACGGTaGCAGCGGCGGATGTCCTTCTTGAGCCGGTGCACG +
Preference number: 6 (lower is better)
Translates to: GSGRGRGRRDIR*QRRMSFLSRCT
Trigger: CGTGCACCGGCTCAAGAAGGACATCCGCCGCTGCCACCGTATGTCCCGCCGTCCCCTGCCCCGCCCGGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CCA 72 bp GGAGGGACAGGTCGAGCACCTCCGGCTCGCGCCAGCTaGGGGCGGATGGGCTCACGGTCTCGGGGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GGTGRAPPARAS*GRMGSRSRGGA
Trigger: AGCTCCTCCCCGAGACCGTGAGCCCATCCGCCCCCAGCTGGCGCGAGCCGGAGGTGCTCGACCTGTCCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp GGGCCGGCAGCAGCTGTGACCTCAGGCGGTGCCCGCTaGCTGGTGGCTGCCGACTCGGGAGGGAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: GPAAAVTSGGAR*LVAADSGGRDR
Trigger: CCTGTCCCTCCCTCCCGAGTCGGCAGCCACCAGCAAGCGGGCACCGCCTGAGGTCACAGCTGCTGCCGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp GGAGGTGCCGGGCCGGCAGCAGCTGTGACCTCAGGCGGTGCCCGCTaGCTGGTGGCTGCCGACTCGGGAGGGAGGGACAGGTCGAGCACC +
Preference number: 6 (lower is better)
Translates to: GGAGPAAAVTSGGAR*LVAADSGGRDRSST
Trigger: GGTGCTCGACCTGTCCCTCCCTCCCGAGTCGGCAGCCACCAGCAAGCGGGCACCGCCTGAGGTCACAGCTGCTGCCGGCCCGGCACCTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS TCA 72 bp GGCGGGACATACGGTGGCAGCGGCGGATGTCCTTCTTaGGCCGGTGCACGGCTGCGCTGGAGTGCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: GGTYGGSGGCPS*AGARLRWSAAW
Trigger: CCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCGCTGCCACCGTATGTCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp TTCTTGAGCCGGTGCACGGCTGCGCTGGAGTGCAGCTaGGGCGAGGAGGCACTGGCGCTCGGCTTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: FLSRCTAALECS*GEEALALGFRR
Trigger: CCTCCTGAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216083.6
CDS TCA 72 bp CCACAAAGTCACCGGCTGTCGGGTGGGAGGGGGCCCTaGGGCATCCGTAGCACTACAGGAAGACAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: PQSHRLSGGRGP*GIRSTTGRQGA
Trigger: GGCCCCCTGTCTTCCTGTAGTGCTACGGATGCCTCAGGGCCCCCTCCCACCCGACAGCCGGTGACTTTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS GCA 72 bp ATGTCCTTCTTGAGCCGGTGCACGGCTGCGCTGGAGTaGAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: MSFLSRCTAALE*SLGEEALALGF
Trigger: GAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216083.6
CDS GCA 72 bp ATACGGTGGCAGCGGCGGATGTCCTTCTTGAGCCGGTaGACGGCTGCGCTGGAGTGCAGCTTGGGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: IRWQRRMSFLSR*TAALECSLGEE
Trigger: CTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCGCCGCTGCCACCGTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS GCA 72 bp ATGTCCTTCTTGAGCCGGTGCACGGCTGCGCTGGAGTaGAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTTG +
Preference number: 6 (lower is better)
Translates to: MSFLSRCTAALE*SLGEEALALGL
Trigger: CAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CAA 72 bp TTCTTGAGCCGGTGCACGGCTGCGCTGGAGTGCAGCTaGGGCGAGGAGGCACTGGCGCTCGGCTTGACAGAG +
Preference number: 6 (lower is better)
Translates to: FLSRCTAALECS*GEEALALGLTE
Trigger: CTCTGTCAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CAA 90 bp AGGATGATGCGGTTCCGCTTGGGCTCCCGCGGCTTCACCTTGCGGTaGATGATGCGCACCGTCTCCGAGAAGGGCGAAATGGGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: RMMRFRLGSRGFTLR*MMRTVSEKGEMGGR
Trigger: GCGCCCGCCCATTTCGCCCTTCTCGGAGACGGTGCGCATCATCAACCGCAAGGTGAAGCCGCGGGAGCCCAAGCGGAACCGCATCATCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp GCTGCGCTGGAGTGCAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTaGACAGAGAAATGCACATCACTGATGCGGAGGGCCTCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: AALECSLGEEALALG*TEKCTSLMRRASAW
Trigger: CCAGGCCGAGGCCCTCCGCATCAGTGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS GCA 72 bp CACTACAGGAAGACAGGGGGCCCACTGAGTCCCACCTaGAGCCGTGCCTGCCACCTAGGGCCATCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: HYRKTGGPLSPT*SRACHLGPSCP
Trigger: AGGGCAAGATGGCCCTAGGTGGCAGGCACGGCTGCAGGTGGGACTCAGTGGGCCCCCTGTCTTCCTGTAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS TCA 72 bp CGCCAGCGCCCTTGTCGATCACCTTCAGGTTCAGGATaGTGCGGTTCCGCTTGGGCTCCCGCGGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: RQRPCRSPSGSG*CGSAWAPAASP
Trigger: AGGTGAAGCCGCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGGTGATCGACAAGGGCGCTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp CGGTTCCGCTTGGGCTCCCGCGGCTTCACCTTGCGGTaGATGATGCGCACCGTCTCCGAGAAGGGCGAAATG +
Preference number: 6 (lower is better)
Translates to: RFRLGSRGFTLR*MMRTVSEKGEM
Trigger: CATTTCGCCCTTCTCGGAGACGGTGCGCATCATCAACCGCAAGGTGAAGCCGCGGGAGCCCAAGCGGAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp CGGATGTCCTTCTTGAGCCGGTGCACGGCTGCGCTGGAGTGCAGCTaGGGCGAGGAGGCACTGGCGCTCGGCTTCAGGAGGAAAGTTTTG +
Preference number: 6 (lower is better)
Translates to: RMSFLSRCTAALECS*GEEALALGFRRKVL
Trigger: CAAAACTTTCCTCCTGAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216083.6
CDS CAA 90 bp ATTGTGACCGTCAGGAGGTTGCTGGTGACATCGGTGACGACCACATaGGAGCAGGGTGACATCTCGGGGCGCCAGTCCCCAGCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: IVTVRRLLVTSVTTT*EQGDISGRQSPASG
Trigger: GCCCGAGGCTGGGGACTGGCGCCCCGAGATGTCACCCTGCTCCAATGTGGTCGTCACCGATGTCACCAGCAACCTCCTGACGGTCACAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp CGGATGTCCTTCTTGAGCCGGTGCACGGCTGCGCTGGAGTGCAGCTaGGGCGAGGAGGCACTGGCGCTCGGCTTGACAGAGAAATGCACA +
Preference number: 6 (lower is better)
Translates to: RMSFLSRCTAALECS*GEEALALGLTEKCT
Trigger: TGTGCATTTCTCTGTCAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTCCAGCGCAGCCGTGCACCGGCTCAAGAAGGACATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CAA 90 bp AGGTTCAGGATGATGCGGTTCCGCTTGGGCTCCCGCGGCTTCACCTaGCGGTTGATGATGCGCACCGTCTCCGAGAAGGGCGAAATGGGC +
Preference number: 6 (lower is better)
Translates to: RFRMMRFRLGSRGFT*RLMMRTVSEKGEMG
Trigger: GCCCATTTCGCCCTTCTCGGAGACGGTGCGCATCATCAACCGCAAGGTGAAGCCGCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp GCGCCCTTGTCGATCACCTTCAGGTTCAGGATGATGCGGTTCCGCTaGGGCTCCCGCGGCTTCACCTTGCGGTTGATGATGCGCACCGTC +
Preference number: 6 (lower is better)
Translates to: APLSITFRFRMMRFR*GSRGFTLRLMMRTV
Trigger: GACGGTGCGCATCATCAACCGCAAGGTGAAGCCGCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGGTGATCGACAAGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp TGGCGGATCTGTGTACGCAGGACGCTCTCGCTGAACTTCTTGCTCTaGCCTATAACGCGGTTCCGCGAGGGGACTTTGGGGCGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: WRICVRRTLSLNFLL*PITRFREGTLGRAS
Trigger: GCTGGCCCGCCCCAAAGTCCCCTCGCGGAACCGCGTTATAGGCAAGAGCAAGAAGTTCAGCGAGAGCGTCCTGCGTACACAGATCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS GCA 72 bp CGAAGACCCGCTCGCCCACTGCAGACAGCTCCATCTTaGTCAGCGGCACCCACAGCCCATAATACTCCCTGC +
Preference number: 6 (lower is better)
Translates to: RRPARPLQTAPS*SAAPTAHNTPC
Trigger: GCAGGGAGTATTATGGGCTGTGGGTGCCGCTGAGCAAGATGGAGCTGTCTGCAGTGGGCGAGCGGGTCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CAA 72 bp GTCAGGAGGTTGCTGGTGACATCGGTGACGACCACATaGGAGCAGGGTGACATCTCGGGGCGCCAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: VRRLLVTSVTTT*EQGDISGRQSP
Trigger: TGGGGACTGGCGCCCCGAGATGTCACCCTGCTCCAATGTGGTCGTCACCGATGTCACCAGCAACCTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp GCCTGGGCCCGCGCCTTCAGGAGGAAAGTTTTGGGTTaGGGTCCCCTCTTCTTGGGCCCATACAGCTCACGC +
Preference number: 6 (lower is better)
Translates to: AWARAFRRKVLG*GPLFLGPYSSR
Trigger: GCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGGCGCGGGCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CAA 72 bp GAGTGCAGCTTGGGCGAGGAGGCACTGGCGCTCGGCTaGACAGAGAAATGCACATCACTGATGCGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: ECSLGEEALALG*TEKCTSLMRRA
Trigger: GGCCCTCCGCATCAGTGATGTGCATTTCTCTGTCAAGCCGAGCGCCAGTGCCTCCTCGCCCAAGCTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CCA 72 bp CCTGGGCCCGCGCCTTCAGGAGGAAAGTTTTGGGTTTaGGTCCCCTCTTCTTGGGCCCATACAGCTCACGCT +
Preference number: 6 (lower is better)
Translates to: PGPAPSGGKFWV*VPSSWAHTAHA
Trigger: AGCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGGCGCGGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407418.8
CDS CCA 72 bp CCCTGCCAGGAGGTGGGACCCCACTCACTCTCCCCCTaGGTTCCAACTCCCAGCACAGTCATAACAGCTCAA +
Preference number: 6 (lower is better)
Translates to: PCQEVGPHSLSP*VPTPSTVITAQ
Trigger: TTGAGCTGTTATGACTGTGCTGGGAGTTGGAACCCAGGGGGAGAGTGAGTGGGGTCCCACCTCCTGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CCA 72 bp GGAGGCTTGTACAGCGCAAAGGCGCCGAACTTCATGTaGCGGATCTGTGTACGCAGGACGCTCTCGCTGAAC +
Preference number: 6 (lower is better)
Translates to: GGLYSAKAPNFM*RICVRRTLSLN
Trigger: GTTCAGCGAGAGCGTCCTGCGTACACAGATCCGCCACATGAAGTTCGGCGCCTTTGCGCTGTACAAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp GCACTGGCGCTCGGCTTCAGGAGGAAAGTTTTGGGTTaGGGTCCCCTCTTCTTGGGCCCATACAGCTCACGC +
Preference number: 6 (lower is better)
Translates to: ALALGFRRKVLG*GPLFLGPYSSR
Trigger: GCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGCCGAGCGCCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216083.6
CDS CAA 90 bp TTCATGTGGCGGATCTGTGTACGCAGGACGCTCTCGCTGAACTTCTaGCTCTTGCCTATAACGCGGTTCCGCGAGGGGACTTTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: FMWRICVRRTLSLNF*LLPITRFREGTLGR
Trigger: CCGCCCCAAAGTCCCCTCGCGGAACCGCGTTATAGGCAAGAGCAAGAAGTTCAGCGAGAGCGTCCTGCGTACACAGATCCGCCACATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp GCGGCGCCTGCTACCCCAGCAGCCACCTTCTCGAAATCCTCAGGGTaGCAGAATTCCTTGATTGTGACCGTCAGGAGGTTGCTGGTGACA +
Preference number: 6 (lower is better)
Translates to: AAPATPAATFSKSSG*QNSLIVTVRRLLVT
Trigger: TGTCACCAGCAACCTCCTGACGGTCACAATCAAGGAATTCTGCAACCCTGAGGATTTCGAGAAGGTGGCTGCTGGGGTAGCAGGCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CCA 72 bp CACTGGCGCTCGGCTTCAGGAGGAAAGTTTTGGGTTTaGGTCCCCTCTTCTTGGGCCCATACAGCTCACGCT +
Preference number: 6 (lower is better)
Translates to: HWRSASGGKFWV*VPSSWAHTAHA
Trigger: AGCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGCCGAGCGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216083.6
CDS CAA 72 bp TCGATCACCTTCAGGTTCAGGATGATGCGGTTCCGCTaGGGCTCCCGCGGCTTCACCTTGCGGTTGATGATG +
Preference number: 6 (lower is better)
Translates to: SITFRFRMMRFR*GSRGFTLRLMM
Trigger: CATCATCAACCGCAAGGTGAAGCCGCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGGTGATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp TGTGTACGCAGGACGCTCTCGCTGAACTTCTTGCTCTaGCCTATAACGCGGTTCCGCGAGGGGACTTTGGGG +
Preference number: 6 (lower is better)
Translates to: CVRRTLSLNFLL*PITRFREGTLG
Trigger: CCCCAAAGTCCCCTCGCGGAACCGCGTTATAGGCAAGAGCAAGAAGTTCAGCGAGAGCGTCCTGCGTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp CGGATCTGTGTACGCAGGACGCTCTCGCTGAACTTCTaGCTCTTGCCTATAACGCGGTTCCGCGAGGGGACT +
Preference number: 6 (lower is better)
Translates to: RICVRRTLSLNF*LLPITRFREGT
Trigger: AGTCCCCTCGCGGAACCGCGTTATAGGCAAGAGCAAGAAGTTCAGCGAGAGCGTCCTGCGTACACAGATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 72 bp TCCCACCTGCAGCCGTGCCTGCCACCTAGGGCCATCTaGCCCTTCCTTTCCCAGACTCTGTTTTTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: SHLQPCLPPRAI*PFLSQTLFFLV
Trigger: GACAAGGAAAAACAGAGTCTGGGAAAGGAAGGGCAAGATGGCCCTAGGTGGCAGGCACGGCTGCAGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS GCA 72 bp TCCAACTCCCAGCACAGTCATAACAGCTCAAACAAATaGCCCCTTCCCATGGGCATCCCCCACCTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: SNSQHSHNSSNK*PLPMGIPHLPQ
Trigger: CTGAGGCAGGTGGGGGATGCCCATGGGAAGGGGGCATTTGTTTGAGCTGTTATGACTGTGCTGGGAGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CCA 72 bp TCTCCCCATGTCTGTGGGCAAGTTACTGGACACCTCTaGCCCTGTTTCCCCATGCGTGAAACAGGGAGGATG +
Preference number: 6 (lower is better)
Translates to: SPHVCGQVTGHL*PCFPMRETGRM
Trigger: CATCCTCCCTGTTTCACGCATGGGGAAACAGGGCCAGAGGTGTCCAGTAACTTGCCCACAGACATGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CAA 72 bp CTGGGCCAGGTTACCTTCAGGAGGAAAGTTTTGGGTTaGGGTCCCCTCTTCTTGGGCCCATACAGCTCACGC +
Preference number: 6 (lower is better)
Translates to: LGQVTFRRKVLG*GPLFLGPYSSR
Trigger: GCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGGTAACCTGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CAA 90 bp ACCCCAGCAGCCACCTTCTCGAAATCCTCAGGGTTGCAGAATTCCTaGATTGTGACCGTCAGGAGGTTGCTGGTGACATCGGTGACGACC +
Preference number: 6 (lower is better)
Translates to: TPAATFSKSSGLQNS*IVTVRRLLVTSVTT
Trigger: GGTCGTCACCGATGTCACCAGCAACCTCCTGACGGTCACAATCAAGGAATTCTGCAACCCTGAGGATTTCGAGAAGGTGGCTGCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS TCA 72 bp AGTTACTGGACACCTCTGGCCCTGTTTCCCCATGCGTaGAACAGGGAGGATGGAAGCTATCTCATGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SYWTPLALFPHA*NREDGSYLMGS
Trigger: GGAGCCCATGAGATAGCTTCCATCCTCCCTGTTTCACGCATGGGGAAACAGGGCCAGAGGTGTCCAGTAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS TCA 72 bp GGCAAGCACCGTAGATGGTGTGAAGGTTTAAGCACCTaGACTCTACCATGGCCTCTCCCCATGTCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: GKHRRWCEGLST*TLPWPLPMSVG
Trigger: GCCCACAGACATGGGGAGAGGCCATGGTAGAGTTCAGGTGCTTAAACCTTCACACCATCTACGGTGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CCA 72 bp TGGGCCAGGTTACCTTCAGGAGGAAAGTTTTGGGTTTaGGTCCCCTCTTCTTGGGCCCATACAGCTCACGCT +
Preference number: 6 (lower is better)
Translates to: WARLPSGGKFWV*VPSSWAHTAHA
Trigger: AGCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGGTAACCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CAA 72 bp GCTACCCCAGCAGCCACCTTCTCGAAATCCTCAGGGTaGCAGAATTCCTTGATTGTGACCGTCAGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: ATPAATFSKSSG*QNSLIVTVRRL
Trigger: CAACCTCCTGACGGTCACAATCAAGGAATTCTGCAACCCTGAGGATTTCGAGAAGGTGGCTGCTGGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS TCA 72 bp AGTAGTTCCTGGCAGAAAGCGCTGAGTGTAATTTGCTaGCTCTGCCATACTGCCTCTCAGGGAGCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: SSSWQKALSVIC*LCHTASQGAPE
Trigger: TTCTGGGGCTCCCTGAGAGGCAGTATGGCAGAGTCAGCAAATTACACTCAGCGCTTTCTGCCAGGAACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS GCA 72 bp GAAAGCGCTGAGTGTAATTTGCTGACTCTGCCATACTaGCTCTCAGGGAGCCCCAGAACAATGTGTTCAGCC +
Preference number: 6 (lower is better)
Translates to: ESAECNLLTLPY*LSGSPRTMCSA
Trigger: GGCTGAACACATTGTTCTGGGGCTCCCTGAGAGGCAGTATGGCAGAGTCAGCAAATTACACTCAGCGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CAA 72 bp GCCACCTTCTCGAAATCCTCAGGGTTGCAGAATTCCTaGATTGTGACCGTCAGGAGGTTGCTGGTGACATCG +
Preference number: 6 (lower is better)
Translates to: ATFSKSSGLQNS*IVTVRRLLVTS
Trigger: CGATGTCACCAGCAACCTCCTGACGGTCACAATCAAGGAATTCTGCAACCCTGAGGATTTCGAGAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS CAA 90 bp AAATCCTCAGGGTTGCAGAATTCCTTGATTGTGACCGTCAGGAGGTaGCTGGTGACATCGGTGACGACCACATTGGAGCAGGGTGACATC +
Preference number: 6 (lower is better)
Translates to: KSSGLQNSLIVTVRR*LVTSVTTTLEQGDI
Trigger: GATGTCACCCTGCTCCAATGTGGTCGTCACCGATGTCACCAGCAACCTCCTGACGGTCACAATCAAGGAATTCTGCAACCCTGAGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216083.6
ENST00000407418.8
CDS GCA 72 bp TACTATCTGTGTCTCTATCCCCTGCCACGCCAACTCTaGAGCCTTCATAGTTTCCTGTGTGTGTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: YYLCLYPLPRQL*SLHSFLCVSAF
Trigger: GAAGGCAGACACACACAGGAAACTATGAAGGCTGCAGAGTTGGCGTGGCAGGGGATAGAGACACAGATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469420.1
CDS CAA 72 bp AACAGGGAGGATGGAAGCTATCTCATGGGCTCCTGTTaGCTTCAGAGTAGTTCCTGGCAGAAAGCGCTGAGT +
Preference number: 6 (lower is better)
Translates to: NREDGSYLMGSC*LQSSSWQKALS
Trigger: ACTCAGCGCTTTCTGCCAGGAACTACTCTGAAGCAAACAGGAGCCCATGAGATAGCTTCCATCCTCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469420.1