RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000094916

Ensembl transcript IDs: ENST00000209875.9, ENST00000439541.6, ENST00000550411.5, ENST00000552562.1, ENST00000618078.1

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGAGGGTGGCCCAGAAGACCACACCAGAAACCCTGTATTCTCCTaGGTAGAGCTGAACAAGGTTGGGAAAGCCCCAACAGGTAGGCAG +
Preference number: 1 (lower is better)
Translates to: TEGGPEDHTRNPVFS*VELNKVGKAPTGRQ
Trigger: CTGCCTACCTGTTGGGGCTTTCCCAACCTTGTTCAGCTCTACCCAGGAGAATACAGGGTTTCTGGTGTGGTCTTCTGGGCCACCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 90 bp TTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTaGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCAATCA +
Preference number: 1 (lower is better)
Translates to: FGNRNALGGHKSWQG*RVPSTLAQASTRQS
Trigger: TGATTGCCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 90 bp GAAGTGAGGGTCAGGTTTGAAGCCTCTTTGGTAACAGGAATGCTTTaGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCT +
Preference number: 1 (lower is better)
Translates to: EVRVRFEASLVTGML*EATKVGRVGGCLAP
Trigger: AGGTGCTAGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCTGACCCTCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 90 bp TGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTaGCACAAGCAAGCACCAGGCAATCACTCACACCTACATAAATAT +
Preference number: 1 (lower is better)
Translates to: WEATKVGRVGGCLAP*HKQAPGNHSHLHKY
Trigger: ATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 90 bp AGGTCGCTGCAGTTTACATGCCCACTGCTACTGGGAGGCATACACTaGGCCACTTGGATAGGCTGTCATTTTCTGCAAATCAAGAGACCC +
Preference number: 1 (lower is better)
Translates to: RSLQFTCPLLLGGIH*ATWIGCHFLQIKRP
Trigger: GGGTCTCTTGATTTGCAGAAAATGACAGCCTATCCAAGTGGCCCAGTGTATGCCTCCCAGTAGCAGTGGGCATGTAAACTGCAGCGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 90 bp GCATGGAAGGGAAACTCGGGTCCACTGAGAAGTGAGGGTCAGGTTTaGAGCCTCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGT +
Preference number: 1 (lower is better)
Translates to: AWKGNSGPLRSEGQV*SLFGNRNALGGHKS
Trigger: ACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCTGACCCTCACTTCTCAGTGGACCCGAGTTTCCCTTCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 90 bp CAGTTTACATGCCCACTGCTACTGGGAGGCATACACTGGGCCACTTaGATAGGCTGTCATTTTCTGCAAATCAAGAGACCCATATCACCT +
Preference number: 1 (lower is better)
Translates to: QFTCPLLLGGIHWAT*IGCHFLQIKRPISP
Trigger: AGGTGATATGGGTCTCTTGATTTGCAGAAAATGACAGCCTATCCAAGTGGCCCAGTGTATGCCTCCCAGTAGCAGTGGGCATGTAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 90 bp GAAGTGACTTGCCCAAGGTCAACCATTATCAATCAGTTGAGGAGGTaGGCACACAGAGTCAGCATCCACTCGATTCTTGTTCCATTTCCC +
Preference number: 1 (lower is better)
Translates to: EVTCPRSTIINQLRR*AHRVSIHSILVPFP
Trigger: GGGAAATGGAACAAGAATCGAGTGGATGCTGACTCTGTGTGCCCACCTCCTCAACTGATTGATAATGGTTGACCTTGGGCAAGTCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 90 bp GATTCTGGTAGAAATCATTATGTCTCTTATCCTAAACTGAGGAGGTaGGGGGTGAGGGTGACACGAGACAAACACCAAACTCACCACCAG +
Preference number: 1 (lower is better)
Translates to: DSGRNHYVSYPKLRR*GVRVTRDKHQTHHQ
Trigger: CTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCACCCCTCACCTCCTCAGTTTAGGATAAGAGACATAATGATTTCTACCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 90 bp ATTCTTGTTCCATTTCCCAGAGCATTTTACCTCTCAGAGTGTACTTaGGAGCAGAGGGAAGTTGGCAGGATACACCTCATTCCACAAACT +
Preference number: 1 (lower is better)
Translates to: ILVPFPRAFYLSECT*EQREVGRIHLIPQT
Trigger: AGTTTGTGGAATGAGGTGTATCCTGCCAACTTCCCTCTGCTCCCAAGTACACTCTGAGAGGTAAAATGCTCTGGGAAATGGAACAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 90 bp ACTCTTGGTGGTAAATCCAGGAGCCAAGAATGCAGGAGACATAACTaGTATGAACACTTAAAATTGATATTGTGGCCAACAGCTCACCTC +
Preference number: 1 (lower is better)
Translates to: TLGGKSRSQECRRHN*YEHLKLILWPTAHL
Trigger: GAGGTGAGCTGTTGGCCACAATATCAATTTTAAGTGTTCATAGCAGTTATGTCTCCTGCATTCTTGGCTCCTGGATTTACCACCAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 90 bp TCCTTCAGAGAGAGAAGGAATATAGAGATAAAACTCCCACCCACTTaGGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCATTCAG +
Preference number: 1 (lower is better)
Translates to: SFRERRNIEIKLPPT*GMVYELLPNHITIQ
Trigger: CTGAATGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTTTTATCTCTATATTCCTTCTCTCTCTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 90 bp GATTCATTCCCTTCCCCACTGCCTTGTTTTAACTCCTTCTCTTACTaGCCTCAGAAACAAATAGCATTGGAGGATCACTTTCTTCCCATA +
Preference number: 1 (lower is better)
Translates to: DSFPSPLPCFNSFSY*PQKQIALEDHFLPI
Trigger: TATGGGAAGAAAGTGATCCTCCAATGCTATTTGTTTCTGAGGTCAGTAAGAGAAGGAGTTAAAACAAGGCAGTGGGGAAGGGAATGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 90 bp AAGGAATATAGAGATAAAACTCCCACCCACTTGAGGTATGGTTTATaGGCTCTTGCCCAATCACATTACCATTCAGAAGGATTTTCCTGG +
Preference number: 1 (lower is better)
Translates to: KEYRDKTPTHLRYGL*ALAQSHYHSEGFSW
Trigger: CCAGGAAAATCCTTCTGAATGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTTTTATCTCTATATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 90 bp AAACTATTAATGGTCAGTTCATCATACACCAGTATGAAAGTTATTTaGGGGCAGGGATGGCCTCTTTCTGAACCTTGTATCTTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: KLLMVSSSYTSMKVI*GQGWPLSEPCIFRP
Trigger: TGGCCTGAAGATACAAGGTTCAGAAAGAGGCCATCCCTGCCCTCAAATAACTTTCATACTGGTGTATGATGAACTGACCATTAATAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 90 bp CATTTTCTGCAAATCAAGAGACCCATATCACCTCCTCAGGAGCTCTaGCCTATTTTTGTCCTATTCTTGTCTACCCTAATTGATATCCTT +
Preference number: 1 (lower is better)
Translates to: HFLQIKRPISPPQEL*PIFVLFLSTLIDIL
Trigger: AAGGATATCAATTAGGGTAGACAAGAATAGGACAAAAATAGGCCAGAGCTCCTGAGGAGGTGATATGGGTCTCTTGATTTGCAGAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 90 bp AGCAGGGAAGCAATGTTAACAAATGCTATGAATGGGTATATGATTTaGATATTATGTGGCTCATCTGTGGACTGGAGCAATCCATCCATT +
Preference number: 1 (lower is better)
Translates to: SREAMLTNAMNGYMI*ILCGSSVDWSNPSI
Trigger: AATGGATGGATTGCTCCAGTCCACAGATGAGCCACATAATATGCAAATCATATACCCATTCATAGCATTTGTTAACATTGCTTCCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 90 bp CTTACTCCAGGGCTACAAACTATACAACATCAGCCAGTCTGTCTCTaGCCCCAAGTCAGAAATGTGTATTGGTTTATAGCATTTATTATA +
Preference number: 1 (lower is better)
Translates to: LTPGLQTIQHQPVCL*PQVRNVYWFIAFII
Trigger: TATAATAAATGCTATAAACCAATACACATTTCTGACTTGGGGGCAGAGACAGACTGGCTGATGTTGTATAGTTTGTAGCCCTGGAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGGGCAGGGTTGGAGGGTaGCTAGCACCTTGGCACAAG +
Preference number: 2 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQGRVGG*LAPWHK
Trigger: CTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCC...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CAA 90 bp AGGCCATCTGCCCAGCCCAGCAATCAAAGGGCTGCTAAGCTGTCCTaGGTAGCCTCTACTGGGCAAAGCTGTGCTATAACTCTGAAGAAA +
Preference number: 2 (lower is better)
Translates to: RPSAQPSNQRAAKLS*VASTGQSCAITLKK
Trigger: TTTCTTCAGAGTTATAGCACAGCTTTGCCCAGTAGAGGCTACCAAGGACAGCTTAGCAGCCCTTTGATTGCTGGGCTGGGCAGATGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGATGTACAAAGAGAAATaGCAGAGACCATCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRMYKEK*QRPSPP
Trigger: AGGAGGGGATGGTCTCTGTCATTTCTCTTTGTACAT...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR GCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCACTCAGTATGTAAATaGCTGGTCTTCACAGAGAGA +
Preference number: 2 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRHSVCK*LVFTER
Trigger: TCTCTCTGTGAAGACCAGGCATTTACATACTGAGTG...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR GCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGTCGCTGCAGTTTACATaGCCACTGCTACTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQSLQFT*PLLLGG
Trigger: GCCTCCCAGTAGCAGTGGGCATGTAAACTGCAGCGA...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCAGCTTTTGCCTCCAGTaGAGGATTCATTCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRISFCLQ*RIHSLP
Trigger: GGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCAGTATGTAAATGCCTaGTCTTCACAGAGAGACACT +
Preference number: 2 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRQYVNA*SSQRDT
Trigger: AGTGTCTCTCTGTGAAGACCAGGCATTTACATACTG...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CAA 90 bp GCAGTTTACATGCCCACTGCTACTGGGAGGCATACACTGGGCCACTaGGATAGGCTGTCATTTTCTGCAAATCAAGAGACCCATATCACC +
Preference number: 2 (lower is better)
Translates to: AVYMPTATGRHTLGH*DRLSFSANQETHIT
Trigger: GGTGATATGGGTCTCTTGATTTGCAGAAAATGACAGCCTATCCAAGTGGCCCAGTGTATGCCTCCCAGTAGCAGTGGGCATGTAAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCAACAGGTAGGCAGTTaGTATTGGCTTTTTAACAGA +
Preference number: 2 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRQQVGS*YWLFNR
Trigger: TCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTG...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCAGTTTACATGCCCACTaGTACTGGGAGGCATACACT +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRISLHAH*YWEAYT
Trigger: AGTGTATGCCTCCCAGTAGCAGTGGGCATGTAAACT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCAGAAAAGCAGCCTCATaGCTGGTGCGCTCTAGAATT +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIRKAAS*LVRSRI
Trigger: AATTCTAGAGCGCACCAGCCATGAGGCTGCTTTTCT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGGAAACTGCAATACACTaGCTCCAGACCTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLETAIH*LQTFPL
Trigger: GAGAGGAAAGGTCTGGAGCCAGTGTATTGCAGTTTC...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGCCCTCTCTCCAGTATTaGATAAAACTGCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLPSLQY*IKLHCS
Trigger: TGAGCAGTGCAGTTTTATTCAATACTGGAGAGAGGG...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCTCCAGGAGCCAAGAATaGAGGAGACATAACTGCTAT +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRISRSQE*RRHNCY
Trigger: ATAGCAGTTATGTCTCCTGCATTCTTGGCTCCTGGA...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGAATGGTAGATGCTCCTaGCCAGACAGCTGTATGTTT +
Preference number: 2 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLNGRCS*PDSCMF
Trigger: AAACATACAGCTGTCTGGCCAGGAGCATCTACCATT...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCTGCCACAGGCATGCTTaGTGGTCTGATTACAAAAGT +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRICHRHA*WSDYKS
Trigger: ACTTTTGTAATCAGACCACCAAGCATGCCTGTGGCA...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCTCTTGTGGTCATCCATaGGTCAGAATCGACAACATC +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRISCGHP*VRIDNI
Trigger: GATGTTGTCGATTCTGACCCATGGATGACCACAAGA...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCGAAACTCGGGTCCACTaGGAAGTGAGGGTCAGGTTT +
Preference number: 2 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGETRVH*EVRVRF
Trigger: AAACCTGACCCTCACTTCTCAGTGGACCCGAGTTTC...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGCACTCAGTATGTAAATaGCTGGTCTTCACAGAGAGA +
Preference number: 2 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLHSVCK*LVFTER
Trigger: TCTCTCTGTGAAGACCAGGCATTTACATACTGAGTG...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAAAGCAGCCTCATGGCTaGTGCGCTCTAGAATTAAGG +
Preference number: 2 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPKQPHG*CALELR
Trigger: CCTTAATTCTAGAGCGCACCAGCCATGAGGCTGCTT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGGATTTGCATATTATGTaGCTCATCTGTGGACTGGAG +
Preference number: 2 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLDLHIM*LICGLE
Trigger: CTCCAGTCCACAGATGAGCCACATAATATGCAAATC...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGAGAGTGGACCAAAACTaGATTTTGTCCATGGCAACA +
Preference number: 2 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLRVDQN*ILSMAT
Trigger: TGTTGCCATGGACAAAATCCAGTTTTGGTCCACTCT...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCCAACAGGTAGGCAGTTaGTATTGGCTTTTTAACAGA +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIQQVGS*YWLFNR
Trigger: TCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTG...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCAAATCTTCCAAAGGATaGAGTAATTCTGGGAGGATG +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIKSSKG*SNSGRM
Trigger: CATCCTCCCAGAATTACTCCATCCTTTGGAAGATTT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCATATGTGGCTCATCTGTaGACTGGAGCAATCCATCCA +
Preference number: 2 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPYVAHL*TGAIHP
Trigger: TGGATGGATTGCTCCAGTCCACAGATGAGCCACATA...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCATCTACTTTCACACATaGCAAACCGCGAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIIYFHT*QTAKKN
Trigger: GTTTTTCTTCGCGGTTTGCCATGTGTGAAAGTAGAT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAATGTACAAAGAGAAATaGCAGAGACCATCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPMYKEK*QRPSPP
Trigger: AGGAGGGGATGGTCTCTGTCATTTCTCTTTGTACAT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAGAGGAGGCAGGGAGGTaGATGTATTATGTACAAAGA +
Preference number: 2 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPEEAGR*MYYVQR
Trigger: TCTTTGTACATAATACATTCACCTCCCTGCCTCCTC...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCAAACTCCCACCCACTTaGGGTATGGTTTATGAGCTC +
Preference number: 2 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGKLPPT*GMVYEL
Trigger: GAGCTCATAAACCATACCTCAAGTGGGTGGGAGTTT...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCCTTGTCTACCCTAATTaGTATCCTTGGCTACATTTA +
Preference number: 2 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRILVYPN*YPWLHL
Trigger: TAAATGTAGCCAAGGATATCAATTAGGGTAGACAAG...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCTCTAGAAATGGTAGATaGTCCTGGCCAGACAGCTGT +
Preference number: 2 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGSRNGR*SWPDSC
Trigger: ACAGCTGTCTGGCCAGGAGCATCTACCATTTCTAGA...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCAAAAGCGACCAACCCTaGAAAGATCAAGACTCTAAG +
Preference number: 2 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGKSDQP*KDQDSK
Trigger: CTTAGAGTCTTGATCTTTTCAGGGTTGGTCGCTTTT...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAACGAAGTATTTTGCTaGGTAAGAAGAAAAGGGTGT +
Preference number: 2 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQNEVFC*VRRKGC
Trigger: ACACCCTTTTCTTCTTACTCAGCAAAATACTTCGTT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCCAGTATGTAAATGCCTaGTCTTCACAGAGAGACACT +
Preference number: 2 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGQYVNA*SSQRDT
Trigger: AGTGTCTCTCTGTGAAGACCAGGCATTTACATACTG...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CAA 90 bp AGGTCAGTATTATTAACCCCATTTGACAGATGGGGAACTGAGGCATaGAAAGAAGTGACTTGCCCAAGGTCAACCATTATCAATCAGTTG +
Preference number: 2 (lower is better)
Translates to: RSVLLTPFDRWGTEA*KEVTCPRSTIINQL
Trigger: CAACTGATTGATAATGGTTGACCTTGGGCAAGTCACTTCTTTCAATGCCTCAGTTCCCCATCTGTCAAATGGGGTTAATAATACTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACATGAACAACAGAGGGTaGCCCAGAAGACCACACCAG +
Preference number: 2 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYMNNRG*PRRPHQ
Trigger: CTGGTGTGGTCTTCTGGGCCACCCTCTGTTGTTCAT...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CAA 90 bp GAGCAGGGAAGCAATGTTAACAAATGCTATGAATGGGTATATGATTaGCATATTATGTGGCTCATCTGTGGACTGGAGCAATCCATCCAT +
Preference number: 2 (lower is better)
Translates to: EQGSNVNKCYEWVYD*HIMWLICGLEQSIH
Trigger: ATGGATGGATTGCTCCAGTCCACAGATGAGCCACATAATATGCAAATCATATACCCATTCATAGCATTTGTTAACATTGCTTCCCTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGGAGGAGGCAGGGAGGTaGATGTATTATGTACAAAGA +
Preference number: 2 (lower is better)
Translates to: SKHQAITHTYINIQSKYEEEAGR*MYYVQR
Trigger: TCTTTGTACATAATACATTCACCTCCCTGCCTCCTC...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CAA 90 bp CCCATATCACCTCCTCAGGAGCTCTGGCCTATTTTTGTCCTATTCTaGTCTACCCTAATTGATATCCTTGGCTACATTTATGATAAATGT +
Preference number: 2 (lower is better)
Translates to: PISPPQELWPIFVLF*STLIDILGYIYDKC
Trigger: ACATTTATCATAAATGTAGCCAAGGATATCAATTAGGGTAGACAAGAATAGGACAAAAATAGGCCAGAGCTCCTGAGGAGGTGATATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR GCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCTGCAGGAGACATAACTaGTATGAACACTTAAAATTG +
Preference number: 2 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGCRRHN*YEHLKL
Trigger: CAATTTTAAGTGTTCATAGCAGTTATGTCTCCTGCA...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGTAATTCTGGGAGGATaGGTGAGGATGAACAACAGA +
Preference number: 2 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYVILGG*VRMNNR
Trigger: TCTGTTGTTCATCCTCACTCATCCTCCCAGAATTAC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR CCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACAACCCTGTATTCTCCTaGGTAGAGCTGAACAAGGTT +
Preference number: 2 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYNPVFS*VELNKV
Trigger: AACCTTGTTCAGCTCTACCCAGGAGAATACAGGGTT...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CAA 90 bp TTAACAGATGTGCTCCAAGACTTCTCTTTAGAAAATCTCTTGTCATaGGAAAGCATGTCCGTTTTAGGCTTAAAGGCAGTTAAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: LTDVLQDFSLENLLS*ESMSVLGLKAVKSH
Trigger: ATGAGACTTAACTGCCTTTAAGCCTAAAACGGACATGCTTTCCAATGACAAGAGATTTTCTAAAGAGAAGTCTTGGAGCACATCTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGTAGGCAGTTGCTATTaGCTTTTTAACAGATGGGCA +
Preference number: 2 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYVGSCY*LFNRWA
Trigger: TGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTAC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR CCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACAAATCTTCCAAAGGATaGAGTAATTCTGGGAGGATG +
Preference number: 2 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYKSSKG*SNSGRM
Trigger: CATCCTCCCAGAATTACTCCATCCTTTGGAAGATTT...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR CCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATTTACAGAAGCAGAAGTaGGGAGTGCTAAAAGCAATA +
Preference number: 2 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYLQKQK*GVLKAI
Trigger: TATTGCTTTTAGCACTCCCCACTTCTGCTTCTGTAA...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 72 bp AGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTaGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACC +
Preference number: 3 (lower is better)
Translates to: RNALGGHKSWQG*RVPSTLAQAST
Trigger: GGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 72 bp GGCCCAGAAGACCACACCAGAAACCCTGTATTCTCCTaGGTAGAGCTGAACAAGGTTGGGAAAGCCCCAACA +
Preference number: 3 (lower is better)
Translates to: GPEDHTRNPVFS*VELNKVGKAPT
Trigger: TGTTGGGGCTTTCCCAACCTTGTTCAGCTCTACCCAGGAGAATACAGGGTTTCTGGTGTGGTCTTCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR CAA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCGCTGCTAAGCTGTCCTaGGTAGCCTCTACTGGGCAA +
Preference number: 3 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIAAKLS*VASTGQ
Trigger: TTGCCCAGTAGAGGCTACCAAGGACAGCTTAGCAGC...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 72 bp GGAAACTCGGGTCCACTGAGAAGTGAGGGTCAGGTTTaGAGCCTCTTTGGTAACAGGAATGCTTTGGGAGGC +
Preference number: 3 (lower is better)
Translates to: GNSGPLRSEGQV*SLFGNRNALGG
Trigger: GCCTCCCAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCTGACCCTCACTTCTCAGTGGACCCGAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 72 bp GTCAGGTTTGAAGCCTCTTTGGTAACAGGAATGCTTTaGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGTGC +
Preference number: 3 (lower is better)
Translates to: VRFEASLVTGML*EATKVGRVGGC
Trigger: GCACCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR CCA 72 bp TGCCCACTGCTACTGGGAGGCATACACTGGGCCACTTaGATAGGCTGTCATTTTCTGCAAATCAAGAGACCC +
Preference number: 3 (lower is better)
Translates to: CPLLLGGIHWAT*IGCHFLQIKRP
Trigger: GGGTCTCTTGATTTGCAGAAAATGACAGCCTATCCAAGTGGCCCAGTGTATGCCTCCCAGTAGCAGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CAA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCGGTAACAGGAATGCTTaGGGAGGCCACAAAAGTTGG +
Preference number: 3 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIGNRNA*GGHKSW
Trigger: CCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACC...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CAA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGGCATTTGATCTTAACTaGAAGGCCATCTGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLAFDLN*KAICPA
Trigger: GGCTGGGCAGATGGCCTTCAAGTTAAGATCAAATGC...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp TCTGGCAAAGGTTTCCACATAACTGATACAATTCTCTaGTTAGAAATCACCCTCTCGGCCCGGCGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: SGKGFHITDTIL*LEITLSARRWL
Trigger: GAGCCACCGCCGGGCCGAGAGGGTGATTTCTAAGCAGAGAATTGTATCAGTTATGTGGAAACCTTTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CAA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCATATTTTGGGGACTCTaGGTGGTAAATCCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIIFWGL*VVNPGA
Trigger: GGCTCCTGGATTTACCACCAAGAGTCCCCAAAATAT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp TGCAATACACTGGCTCCAGACCTTTCCTCTCTGCCTTaGCACAGGCATGCTTGGTGGTCTGATTACAAAAGT +
Preference number: 3 (lower is better)
Translates to: CNTLAPDLSSLP*HRHAWWSDYKS
Trigger: ACTTTTGTAATCAGACCACCAAGCATGCCTGTGGCAAGGCAGAGAGGAAAGGTCTGGAGCCAGTGTATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp ACTACATCACATCCCTCCCCACAATACCCAGAGGGCTaGATTTTTCCAACCTTTCTGCCTCAGCTCAACTTC +
Preference number: 3 (lower is better)
Translates to: TTSHPSPQYPEG*IFPTFLPQLNF
Trigger: GAAGTTGAGCTGAGGCAGAAAGGTTGGAAAAATGCAGCCCTCTGGGTATTGTGGGGAGGGATGTGATGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 72 bp CAGTTTACATGCCCACTGCTACTGGGAGGCATACACTaGGCCACTTGGATAGGCTGTCATTTTCTGCAAATC +
Preference number: 3 (lower is better)
Translates to: QFTCPLLLGGIH*ATWIGCHFLQI
Trigger: GATTTGCAGAAAATGACAGCCTATCCAAGTGGCCCAGTGTATGCCTCCCAGTAGCAGTGGGCATGTAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 72 bp TGGAAGCAGGCATCTGATTTCCTTTGTGCTAAGGGCTaGAATCAATACTGGCCTCTGGCTCCCTACATTCCT +
Preference number: 3 (lower is better)
Translates to: WKQASDFLCAKG*NQYWPLAPYIP
Trigger: AGGAATGTAGGGAGCCAGAGGCCAGTATTGATTTCAGCCCTTAGCACAAAGGAAATCAGATGCCTGCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 72 bp CCATTTCCCAGAGCATTTTACCTCTCAGAGTGTACTTaGGAGCAGAGGGAAGTTGGCAGGATACACCTCATT +
Preference number: 3 (lower is better)
Translates to: PFPRAFYLSECT*EQREVGRIHLI
Trigger: AATGAGGTGTATCCTGCCAACTTCCCTCTGCTCCCAAGTACACTCTGAGAGGTAAAATGCTCTGGGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 72 bp TGCCCAAGGTCAACCATTATCAATCAGTTGAGGAGGTaGGCACACAGAGTCAGCATCCACTCGATTCTTGTT +
Preference number: 3 (lower is better)
Translates to: CPRSTIINQLRR*AHRVSIHSILV
Trigger: AACAAGAATCGAGTGGATGCTGACTCTGTGTGCCCACCTCCTCAACTGATTGATAATGGTTGACCTTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CAA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGTCCAGCAACCAGTTATaGATGATTCATGGCCTACAT +
Preference number: 3 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLSSNQL*MIHGLH
Trigger: ATGTAGGCCATGAATCATCAATAACTGGTTGCTGGA...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CAA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAGCTCTGGCCTATTTTaGTCCTATTCTTGTCTACCC +
Preference number: 3 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQSSGLF*SYSCLP
Trigger: GGGTAGACAAGAATAGGACAAAAATAGGCCAGAGCT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp GACAGATGGGGAACTGAGGCATTGAAAGAAGTGACTTaGCCAAGGTCAACCATTATCAATCAGTTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: DRWGTEALKEVT*PRSTIINQLRR
Trigger: CCTCCTCAACTGATTGATAATGGTTGACCTTGGGCAAGTCACTTCTTTCAATGCCTCAGTTCCCCATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 72 bp GACCTTTCCTCTCTGCCTTGCCACAGGCATGCTTGGTaGTCTGATTACAAAAGTACGGATCTCAACACTATA +
Preference number: 3 (lower is better)
Translates to: DLSSLPCHRHAW*SDYKSTDLNTI
Trigger: TATAGTGTTGAGATCCGTACTTTTGTAATCAGACCACCAAGCATGCCTGTGGCAAGGCAGAGAGGAAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 72 bp CAGAAGCTTGTTTTGGGGACAGGAATTCCAAGAGTCTaGGTGAAGATGTGGTTGGAAGCCTTCTCAAACATG +
Preference number: 3 (lower is better)
Translates to: QKLVLGTGIPRV*VKMWLEAFSNM
Trigger: CATGTTTGAGAAGGCTTCCAACCACATCTTCACTCAGACTCTTGGAATTCCTGTCCCCAAAACAAGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 72 bp CTAGGGCAAGAACATCTACTCAACACTAACAAATGCTaGAAGCAGGCATCTGATTTCCTTTGTGCTAAGGGC +
Preference number: 3 (lower is better)
Translates to: LGQEHLLNTNKC*KQASDFLCAKG
Trigger: GCCCTTAGCACAAAGGAAATCAGATGCCTGCTTCCAGCATTTGTTAGTGTTGAGTAGATGTTCTTGCCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 72 bp CTGAGGGGAGAAAGCTCCATGAAACAGGTTTCTGTTTaGGGCTGTAATTCTTCTAGGGCAAGAACATCTACT +
Preference number: 3 (lower is better)
Translates to: LRGESSMKQVSV*GCNSSRARTST
Trigger: AGTAGATGTTCTTGCCCTAGAAGAATTACAGCCTCAAACAGAAACCTGTTTCATGGAGCTTTCTCCCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 72 bp AGAAATCATTATGTCTCTTATCCTAAACTGAGGAGGTaGGGGGTGAGGGTGACACGAGACAAACACCAAACT +
Preference number: 3 (lower is better)
Translates to: RNHYVSYPKLRR*GVRVTRDKHQT
Trigger: AGTTTGGTGTTTGTCTCGTGTCACCCTCACCCCTCACCTCCTCAGTTTAGGATAAGAGACATAATGATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTaGCCAATCACATTACCATTCAGAAGGATTTTCCTG +
Preference number: 3 (lower is better)
Translates to: NSHPLEVWFMSS*PITLPFRRIFL
Trigger: CAGGAAAATCCTTCTGAATGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp GGGCTACAAACTATACAACATCAGCCAGTCTGTCTCTaGCCCCAAGTCAGAAATGTGTATTGGTTTATAGCA +
Preference number: 3 (lower is better)
Translates to: GLQTIQHQPVCL*PQVRNVYWFIA
Trigger: TGCTATAAACCAATACACATTTCTGACTTGGGGGCAGAGACAGACTGGCTGATGTTGTATAGTTTGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 72 bp AGAGATAAAACTCCCACCCACTTGAGGTATGGTTTATaGGCTCTTGCCCAATCACATTACCATTCAGAAGGA +
Preference number: 3 (lower is better)
Translates to: RDKTPTHLRYGL*ALAQSHYHSEG
Trigger: TCCTTCTGAATGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTTTTATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp TTGGGGACTCTTGGTGGTAAATCCAGGAGCCAAGAATaGAGGAGACATAACTGCTATGAACACTTAAAATTG +
Preference number: 3 (lower is better)
Translates to: LGTLGGKSRSQE*RRHNCYEHLKL
Trigger: CAATTTTAAGTGTTCATAGCAGTTATGTCTCCTGCATTCTTGGCTCCTGGATTTACCACCAAGAGTCCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 72 bp CAAATCAAGAGACCCATATCACCTCCTCAGGAGCTCTaGCCTATTTTTGTCCTATTCTTGTCTACCCTAATT +
Preference number: 3 (lower is better)
Translates to: QIKRPISPPQEL*PIFVLFLSTLI
Trigger: AATTAGGGTAGACAAGAATAGGACAAAAATAGGCCAGAGCTCCTGAGGAGGTGATATGGGTCTCTTGATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR TCA 72 bp GAGAGAAGGAATATAGAGATAAAACTCCCACCCACTTaGGGTATGGTTTATGAGCTCTTGCCCAATCACATT +
Preference number: 3 (lower is better)
Translates to: ERRNIEIKLPPT*GMVYELLPNHI
Trigger: AATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTTTTATCTCTATATTCCTTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR GCA 72 bp GGTAAATCCAGGAGCCAAGAATGCAGGAGACATAACTaGTATGAACACTTAAAATTGATATTGTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: GKSRSQECRRHN*YEHLKLILWPT
Trigger: TGTTGGCCACAATATCAATTTTAAGTGTTCATAGCAGTTATGTCTCCTGCATTCTTGGCTCCTGGATTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CCA 72 bp ATTAAGCATTTATTCTTATTTCCTCAGCTTTGGGGCTaGGACAAGGATCCTCAAAACCCTGCTATTTCCTTA +
Preference number: 3 (lower is better)
Translates to: IKHLFLFPQLWG*DKDPQNPAISL
Trigger: TAAGGAAATAGCAGGGTTTTGAGGATCCTTGTCCCAGCCCCAAAGCTGAGGAAATAAGAATAAATGCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATAAGTTGAAACTCATCTaGAGGTCACAGGGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYKLKLI*RSQGSR
Trigger: TCTGCTTCCCTGTGACCTCAAGATGAGTTTCAACTT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR-3UTR CAA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACAAGTTGAAACTCATCTaGAGGTCACAGGGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYKLKLI*RSQGSR
Trigger: TCTGCTTCCCTGTGACCTCAAGATGAGTTTCAACTT...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
3UTR TCA 72 bp ACGATCAGACTGTTTCTTAACCCAGCTACGCTTCGATaGTTAAATCTGAGACTCAGATTTAATATACAAGGT +
Preference number: 3 (lower is better)
Translates to: TIRLFLNPATLR*LNLRLRFNIQG
Trigger: ACCTTGTATATTAAATCTGAGTCTCAGATTTAATCATCGAAGCGTAGCTGGGTTAAGAAACAGTCTGATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCACCGCCGCCGCCTTCTaGGCAACGCCAACCGCCCGC +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRITAAAF*ATPTAR
Trigger: GCGGGCGGTTGGCGTTGCGCAGAAGGCGGCGGCGGT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCCGGGAGGTGGAGCTTaGAGTGAGCCGAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRPGGGA*SEPRLR
Trigger: GCGCAATCTCGGCTCACTGCAAGCTCCACCTCCCGG...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGCTCCCCTCCCAGGTCTaGGTCTTGGCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGLPSQV*VLAGWQ
Trigger: CTGCCAGCCCGCCAAGACCCAGACCTGGGAGGGGAG...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439541.6
CDS-3UTR TCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGAGCTGCTCAGGAGGCTaGGGCAGAGAACTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRSCSGG*GRELLE
Trigger: TTCAAGCAGTTCTCTGCCTCAGCCTCCTGAGCAGCT...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGCCTGTTCCTGTATGGTaGGGCCGCACCACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGPVPVW*GRTTSH
Trigger: GTGGCTTGTGGTGCGGCCTCACCATACAGGAACAGG...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCAGACCTTTCCTCTCTaGCTTGCCACAGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRQTFPL*LATGML
Trigger: AAGCATGCCTGTGGCAAGGCAGAGAGGAAAGGTCTG...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGATGAACAACAGAGGGTaGCCCAGAAGACCACACCAG +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRMNNRG*PRRPHQ
Trigger: CTGGTGTGGTCTTCTGGGCCACCCTCTGTTGTTCAT...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCCATTATCAATCAGTTaGGGAGGTGGGCACACAGAG +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRPLSIS*GGGHTE
Trigger: CTCTGTGTGCCCACCTCCTCAACTGATTGATAATGG...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CAA 72 bp GCCCAGCCCAGCAATCAAAGGGCTGCTAAGCTGTCCTaGGTAGCCTCTACTGGGCAAAGCTGTGCTATAACT +
Preference number: 4 (lower is better)
Translates to: AQPSNQRAAKLS*VASTGQSCAIT
Trigger: AGTTATAGCACAGCTTTGCCCAGTAGAGGCTACCAAGGACAGCTTAGCAGCCCTTTGATTGCTGGGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGCTTTCCTCTCTGCCTTaGCACAGGCATGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLLSSLP*HRHAWW
Trigger: CCACCAAGCATGCCTGTGGCAAGGCAGAGAGGAAAG...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGTCTCCAGGTTTAAAATaGGTGCTCCCATGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRSPGLK*VLPCRL
Trigger: CAGCCTACATGGGAGCACCCATTTTAAACCTGGAGA...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAAGGCAGAGAACTGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPRQRTA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCAGTTCTCTGCCT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGGGTTCCCAAGTATTGTaGTCCTCAGAAAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRGSQVL*SSEKPF
Trigger: GAAAGGCTTTTCTGAGGAGCACAATACTTGGGAACC...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGAAAAGTTGGCAGGGTTaGAGGGTGCCTAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLKSWQG*RVPSTL
Trigger: CAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGGGAGGCCACAAAAGTTaGCAGGGTTGGAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQGGHKS*QGWRVP
Trigger: AGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCC...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACACATGCCCACTGCTACTaGGAGGCATACACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATHAHCY*EAYTGP
Trigger: TGGCCCAGTGTATGCCTCCCAGTAGCAGTGGGCATG...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGTTCCCCAATGCCCTGTaGTTTGGCCTGAACATAGGG +
Preference number: 4 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLFPNAL*FGLNIG
Trigger: CCCTATGTTCAGGCCAAACCACAGGGCATTGGGGAA...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAGTGAGGGTCAGGTTTaGAGCCTCTTTGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGSEGQV*SLFGNR
Trigger: CCTGTTACCAAAGAGGCTTCAAACCTGACCCTCACT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGTTGAGGTATGGTTTATaGGCTCTTGCCCAATCACAT +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRLRYGL*ALAQSH
Trigger: ATGTGATTGGGCAAGAGCTCATAAACCATACCTCAA...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCGGCAGGAGAATCGCTTaGACCCAGGAGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGGRRIA*TQEVEG
Trigger: ACCCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGCAGCCTCATGGCTGGTaGGCTCTAGAATTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGQPHGW*ALELRL
Trigger: TAGCCTTAATTCTAGAGCGCACCAGCCATGAGGCTG...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAACCACAGCAGCCACATaGCCCAGGTTTCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATTTAAT*PRFLRT
Trigger: GGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCAACTTGAAGGCCATCTaGCCAGCCCAGCAATCAAAG +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRINLKAI*PAQQSK
Trigger: CTTTGATTGCTGGGCTGGGCAGATGGCCTTCAAGTT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGACCAGACACCGTGGTGTaGGCCTGTAGTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRPDTVV*ACSPSC
Trigger: GCAGCTGGGACTACAGGCGCACACCACGGTGTCTGG...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCAAGCAGCCTCATGGCTaGTGCGCTCTAGAATTAAGG +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIKQPHG*CALELR
Trigger: CCTTAATTCTAGAGCGCACCAGCCATGAGGCTGCTT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAGTATGCAGTATGGCTaGGGGACAGTCAAGGACCAT +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGSMQYG*GTVKDH
Trigger: ATGGTCCTTGACTGTCCCCCAGCCATACTGCATACT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGCTTTGTGCTAAGGGCTaGAATCAATACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGLCAKG*NQYWPL
Trigger: CAGAGGCCAGTATTGATTTCAGCCCTTAGCACAAAG...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCATCGCTGCAGTTTACATaGCCACTGCTACTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPSLQFT*PLLLGG
Trigger: GCCTCCCAGTAGCAGTGGGCATGTAAACTGCAGCGA...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGATGCACAAAGTAGTATaGAGTATGGCTGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGMHKVV*SMAGGQ
Trigger: CTGTCCCCCAGCCATACTGCATACTACTTTGTGCAT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCAAAAACCTTCCCCAATaGCCTGTGGTTTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIKNLPQ*PVVWPE
Trigger: TTCAGGCCAAACCACAGGGCATTGGGGAAGGTTTTT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGACTGATACAATTCTCTaGTTAGAAATCACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRTDTIL*LEITLS
Trigger: CGAGAGGGTGATTTCTAAGCAGAGAATTGTATCAGT...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAATGAACAACAGAGGGTaGCCCAGAAGACCACACCAG +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATMNNRG*PRRPHQ
Trigger: CTGGTGTGGTCTTCTGGGCCACCCTCTGTTGTTCAT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGGTAACAGGAATGCTTTaGGAGGCCACAAAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGVTGML*EATKVG
Trigger: GCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTAC...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAGAAAAGCAGCCTCATaGCTGGTGCGCTCTAGAATT +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGRKAAS*LVRSRI
Trigger: AATTCTAGAGCGCACCAGCCATGAGGCTGCTTTTCT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGTATGTGGCTCATCTGTaGACTGGAGCAATCCATCCA +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGYVAHL*TGAIHP
Trigger: TGGATGGATTGCTCCAGTCCACAGATGAGCCACATA...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGCCTCCTCAGGAGCTCTaGCCTATTTTTGTCCTATTC +
Preference number: 4 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLPPQEL*PIFVLF
Trigger: GAATAGGACAAAAATAGGCCAGAGCTCCTGAGGAGG...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCACTGGGAGGCATACACTaGGCCACTTGGATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPLGGIH*ATWIGC
Trigger: ACAGCCTATCCAAGTGGCCCAGTGTATGCCTCCCAG...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGCTTGGTAGCCTCTACTaGGCAAAGCTGTGCTATAAC +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGLGSLY*AKLCYN
Trigger: GTTATAGCACAGCTTTGCCCAGTAGAGGCTACCAAG...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAAAGCTGCAAGTTGGTaGCGTGGGAATCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQKAASW*RGNPST
Trigger: GGTGCTAGGATTCCCACGCCACCAACTTGCAGCTTT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAGGAGCAGAGGGAAGTTaGCAGGATACACCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATGAEGS*QDTPHS
Trigger: GGAATGAGGTGTATCCTGCCAACTTCCCTCTGCTCC...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CAA 72 bp GGAGGTGGGCACACAGAGTCAGCATCCACTCGATTCTaGTTCCATTTCCCAGAGCATTTTACCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GGGHTESASTRF*FHFPEHFTSQS
Trigger: ACTCTGAGAGGTAAAATGCTCTGGGAAATGGAACAAGAATCGAGTGGATGCTGACTCTGTGTGCCCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAGCACACCGTTCCACCTaGAAGACTAAGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRAHRST*KTKATR
Trigger: CCTGGTGGCCTTAGTCTTTCAGGTGGAACGGTGTGC...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACACTCCTCCTCATCCTCTaGAGAAGAACTGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATLLLIL*RRTVSC
Trigger: ACAGCTGACAGTTCTTCTTCAGAGGATGAGGAGGAG...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGGTAATTCTGGGAGGATaGGTGAGGATGAACAACAGA +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGVILGG*VRMNNR
Trigger: TCTGTTGTTCATCCTCACTCATCCTCCCAGAATTAC...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAGTGAGGGTCAGGTTTaGAGCCTCTTTGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQSEGQV*SLFGNR
Trigger: CCTGTTACCAAAGAGGCTTCAAACCTGACCCTCACT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGATGCCTTCCCATCACCTaGCCCTCCTCTGAAACCACC +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRCLPIT*PSSETT
Trigger: GGTGGTTTCAGAGGAGGGTCAGGTGATGGGAAGGCA...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGCTGGTAAAGTGTCCATaGGGAATATGTTGTTATAGA +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRLVKCP*GICCYR
Trigger: TCTATAACAACATATTCCTCATGGACACTTTACCAG...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGCCCTCTCTCCAGTATTaGATAAAACTGCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGPSLQY*IKLHCS
Trigger: TGAGCAGTGCAGTTTTATTCAATACTGGAGAGAGGG...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGGCACGGCCAAGATGGTaGACCCTGTCTCTACTAAAA +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQARPRW*TLSLLK
Trigger: TTTTAGTAGAGACAGGGTTCACCATCTTGGCCGTGC...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGAAGAGTGTTGTGACATaGTTAAACTGTCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRKSVVT*LNCLFR
Trigger: CCTGAAAAGACAGTTTAATCATGTCACAACACTCTT...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCACACCACAGGTCCAAATaGTCCCCAGAGTGGACCAAA +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPHHRSK*SPEWTK
Trigger: TTTGGTCCACTCTGGGGAGCATTTGGACCTGTGGTG...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAAGCTTTTGCCTCCAGTaGAGGATTCATTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATSFCLQ*RIHSLP
Trigger: GGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAACCCTGTATTCTCCTaGGTAGAGCTGAACAAGGTT +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGNPVFS*VELNKV
Trigger: AACCTTGTTCAGCTCTACCCAGGAGAATACAGGGTT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCACCTCAGCTTTGGGGCTaGGACAAGGATCCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPPQLWG*DKDPQN
Trigger: GTTTTGAGGATCCTTGTCCCAGCCCCAAAGCTGAGG...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGCAATGCCCTGTGGTTTaGCCTGAACATAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLQCPVV*PEHREN
Trigger: ATTTTCCCTATGTTCAGGCCAAACCACAGGGCATTG...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGGTCATCGGCACTGTTTaGGAAATTGGATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGVIGTV*EIGFPL
Trigger: AAGAGGAAATCCAATTTCTCAAACAGTGCCGATGAC...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAAAACTCCCACCCACTTaGGGTATGGTTTATGAGCTC +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATKLPPT*GMVYEL
Trigger: GAGCTCATAAACCATACCTCAAGTGGGTGGGAGTTT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGCTCCACAGAGGACCCTaGAGTATTCTATTAACTTTG +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGLHRGP*SILLTL
Trigger: CAAAGTTAATAGAATACTTCAGGGTCCTCTGTGGAG...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCACGCATCCTCAGGATATaGATGCCATGTCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPRILRI*MPCQSL
Trigger: GAGAGACTGACATGGCATGCATATCCTGAGGATGCG...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGGGCAGGGTTGGAGGGTaGCTAGCACCTTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEGRVGG*LAPWHK
Trigger: CTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCC...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR GCA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGTGCAGGAGACATAACTaGTATGAACACTTAAAATTG +
Preference number: 4 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRCRRHN*YEHLKL
Trigger: CAATTTTAAGTGTTCATAGCAGTTATGTCTCCTGCA...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR GCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAAGTCTGTCATGTCACTaGAGCAACAGCTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPSLSCH*SNSCHL
Trigger: GAGGTGACAGCTGTTGCTGCAGTGACATGACAGACT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAAGTTTACATGCCCACTaGTACTGGGAGGCATACACT +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATSLHAH*YWEAYT
Trigger: AGTGTATGCCTCCCAGTAGCAGTGGGCATGTAAACT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGTACTGGGCAAAGCTGTaGTATAACTCTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLYWAKL*YNSEER
Trigger: CCTTTCTTCAGAGTTATAGCACAGCTTTGCCCAGTA...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCCAGTATGTAAATGCCTaGTCTTCACAGAGAGACACT +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIQYVNA*SSQRDT
Trigger: AGTGTCTCTCTGTGAAGACCAGGCATTTACATACTG...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGGTAGGCAGTTGCTATTaGCTTTTTAACAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGVGSCY*LFNRWA
Trigger: TGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTAC...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGGGGTGCCTAGCACCTTaGCACAAGCAAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEGCLAP*HKQAPG
Trigger: GCCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCC...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAGTAACAGGAATGCTTTaGGAGGCCACAAAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATVTGML*EATKVG
Trigger: GCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTAC...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACATTATTTCCTCAGCTTTaGGGCTGGGACAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATLFPQL*GWDKDP
Trigger: AGGATCCTTGTCCCAGCCCCAAAGCTGAGGAAATAA...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGGACAGACAATCACTTTaGAATTCTGAGACTACCTCC +
Preference number: 4 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLDRQSL*NSETTS
Trigger: GGAGGTAGTCTCAGAATTCCAAAGTGATTGTCTGTC...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGGAAACTGCAATACACTaGCTCCAGACCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQETAIH*LQTFPL
Trigger: GAGAGGAAAGGTCTGGAGCCAGTGTATTGCAGTTTC...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGTGTTCTATGGCCAGCTaGCTCAGTTCACCCAATGTT +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQCSMAS*LSSPNV
Trigger: AACATTGGGTGAACTGAGCCAGCTGGCCATAGAACA...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAATGTACAAAGAGAAATaGCAGAGACCATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATMYKEK*QRPSPP
Trigger: AGGAGGGGATGGTCTCTGTCATTTCTCTTTGTACAT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAGAAACTCGGGTCCACTaGGAAGTGAGGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRETRVH*EVRVRF
Trigger: AAACCTGACCCTCACTTCTCAGTGGACCCGAGTTTC...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAATTCCTGGGAATTCTaGCTTCCAAAGTTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGNSWEF*LPKLVN
Trigger: GTTGACTAACTTTGGAAGTCAGAATTCCCAGGAATT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAAGCCTTCTCAAACATaGAAGTCCAGGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQKPSQT*KSRAFL
Trigger: GAGAAAAGCCCTGGACTTGCATGTTTGAGAAGGCTT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAATAGGGAAAATGGACTaGTGGGTGGCTACAGAACAG +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPIGKMD*WVATEQ
Trigger: CTGTTCTGTAGCCACCCAGCAGTCCATTTTCCCTAT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAACTTTGATTTACAATaGCTCACAACAACACCCCTG +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGNFDLQ*LTTTPL
Trigger: CAGGGGTGTTGTTGTGAGGCATTGTAAATCAAAGTT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAAATCTTCCAAAGGATaGAGTAATTCTGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGKSSKG*SNSGRM
Trigger: CATCCTCCCAGAATTACTCCATCCTTTGGAAGATTT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCTTACAGAAGCAGAAGTaGGGAGTGCTAAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRILQKQK*GVLKAI
Trigger: TATTGCTTTTAGCACTCCCCACTTCTGCTTCTGTAA...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACACACAGGCATGCTTGGTaGTCTGATTACAAAAGTACG +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATHRHAW*SDYKST
Trigger: CGTACTTTTGTAATCAGACCACCAAGCATGCCTGTG...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCAATCAGTTGAGGAGGTaGGCACACAGAGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGNQLRR*AHRVSI
Trigger: GATGCTGACTCTGTGTGCCCACCTCCTCAACTGATT...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCCTAACGGTGTTCTCATaGCATTGCAAAGTAGTATTT +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRILTVFS*HCKVVF
Trigger: AAATACTACTTTGCAATGTCATGAGAACACCGTTAG...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACACATCATACACCAGTATaGAAGTTATTTGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATHHTPV*KLFEGR
Trigger: CCTGCCCTCAAATAACTTTCATACTGGTGTATGATG...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGAAATTGAAAAAGGTGTaGGCAACTCTGGTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGKLKKV*ATLVKC
Trigger: ACACTTTACCAGAGTTGCTCACACCTTTTTCAATTT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCATCCTCAGGATATGCATaGCATGTCAGTCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPSSGYA*HVSLSS
Trigger: TGAAGAGAGACTGACATGGCATGCATATCCTGAGGA...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACACACTCAGTATGTAAATaGCTGGTCTTCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATHSVCK*LVFTER
Trigger: TCTCTCTGTGAAGACCAGGCATTTACATACTGAGTG...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR GCA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCATAGAGGTGAATGTCTaGATTAGGATCAAGACAAGA +
Preference number: 4 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIIEVNV*IRIKTR
Trigger: TCTTGTCTTGATCCTAATGCAGACATTCACCTCTAT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCATTCCTTGTCAGCTTTTaGCTCCAGTGCAGGATTCAT +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPFLVSF*LQCRIH
Trigger: ATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAA...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACGGGTGCCTAGCACCTTaGCACAAGCAAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYGCLAP*HKQAPG
Trigger: GCCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCC...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCCACCCACTTGAGGTATaGTTTATGAGCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGHPLEV*FMSSCP
Trigger: TGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTG...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCTGTTCTTGTGTTCTATaGCCAGCTGGCTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGCSCVL*PAGSVH
Trigger: GTGAACTGAGCCAGCTGGCCATAGAACACAAGAACA...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCTATAAAGCTGCAAGTTaGTGGCGTGGGAATCCTAGC +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGYKAAS*WRGNPS
Trigger: GCTAGGATTCCCACGCCACCAACTTGCAGCTTTATA...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGCACACCGTTCCACCTaGAAGACTAAGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYAHRST*KTKATR
Trigger: CCTGGTGGCCTTAGTCTTTCAGGTGGAACGGTGTGC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCATGTACAAAGAGAAATaGCAGAGACCATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGMYKEK*QRPSPP
Trigger: AGGAGGGGATGGTCTCTGTCATTTCTCTTTGTACAT...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGATCTAGAAATGGTAGATaGTCCTGGCCAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRSRNGR*SWPDSC
Trigger: ACAGCTGTCTGGCCAGGAGCATCTACCATTTCTAGA...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGTGGTTTATGAGCTCTTaGCCAATCACATTACCATTC +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQWFMSS*PITLPF
Trigger: GAATGGTAATGTGATTGGGCAAGAGCTCATAAACCA...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGCAGCCAGTCTGTCTCTaGCCCCAAGTCAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEQPVCL*PQVRNV
Trigger: CACATTTCTGACTTGGGGGCAGAGACAGACTGGCTG...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGGAGGCCACAAAAGTTaGCAGGGTTGGAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYGGHKS*QGWRVP
Trigger: AGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCAAAATAGCACCCCAGTaGATGGTAGTCAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGKIAPQ*MVVKLS
Trigger: GGAAAGCTTGACTACCATCCACTGGGGTGCTATTTT...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAACTGGATTTTGTCCATaGCAACACTGTTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPTGFCP*QHCSPL
Trigger: TAGTGGAGAACAGTGTTGCCATGGACAAAATCCAGT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGCTCTCAGAGTGTACTTaGGAGCAGAGGGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYELSECT*EQREVG
Trigger: GCCAACTTCCCTCTGCTCCCAAGTACACTCTGAGAG...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAGTAATTCTGGGAGGATaGGTGAGGATGAACAACAGA +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRVILGG*VRMNNR
Trigger: TCTGTTGTTCATCCTCACTCATCCTCCCAGAATTAC...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGCTTGTCTACCCTAATTaGTATCCTTGGCTACATTTA +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQLVYPN*YPWLHL
Trigger: TAAATGTAGCCAAGGATATCAATTAGGGTAGACAAG...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGTGCTCCCATGTAGGCTaGTTTTCCCGGCATTTGATC +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYECSHVG*FSRHLI
Trigger: GATCAAATGCCGGGAAAATCAGCCTACATGGGAGCA...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAATCACTTTGGAATTCTaGGACTACCTCCAAGAATCA +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPITLEF*DYLQES
Trigger: TGATTCTTGGAGGTAGTCTCAGAATTCCAAAGTGAT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGACATTCCCTTCCCCACTaGCTTGTTTTAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRHSLPH*LVLTPS
Trigger: AGAAGGAGTTAAAACAAGGCAGTGGGGAAGGGAATG...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGACAATACCCAGAGGGCTaGATTTTTCCAACCTTTCTG +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRQYPEG*IFPTFL
Trigger: CAGAAAGGTTGGAAAAATGCAGCCCTCTGGGTATTG...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGACTGAAAATAATGGCATaGAAGGGAAACTCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRLKIMA*KGNSGP
Trigger: TGGACCCGAGTTTCCCTTCCATGCCATTATTTTCAG...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAAATGGTAGATGCTCCTaGCCAGACAGCTGTATGTTT +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRNGRCS*PDSCMF
Trigger: AAACATACAGCTGTCTGGCCAGGAGCATCTACCATT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAATCTACTTTCACACATaGCAAACCGCGAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPIYFHT*QTAKKN
Trigger: GTTTTTCTTCGCGGTTTGCCATGTGTGAAAGTAGAT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAAAATGGACTGCTGGGTaGCTACAGAACAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRKWTAG*LQNRNE
Trigger: TTCATTCCTGTTCTGTAGCCACCCAGCAGTCCATTT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CAA 72 bp TTATTAACCCCATTTGACAGATGGGGAACTGAGGCATaGAAAGAAGTGACTTGCCCAAGGTCAACCATTATC +
Preference number: 4 (lower is better)
Translates to: LLTPFDRWGTEA*KEVTCPRSTII
Trigger: GATAATGGTTGACCTTGGGCAAGTCACTTCTTTCAATGCCTCAGTTCCCCATCTGTCAAATGGGGTTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAAAAAGCGACCAACCCTaGAAAGATCAAGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRKSDQP*KDQDSK
Trigger: CTTAGAGTCTTGATCTTTTCAGGGTTGGTCGCTTTT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAAACGAAGTATTTTGCTaGGTAAGAAGAAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPNEVFC*VRRKGC
Trigger: ACACCCTTTTCTTCTTACTCAGCAAAATACTTCGTT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGGGATGGCCTCTTTCTaGACCTTGTATCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYGMASF*TLYLQA
Trigger: GGCCTGAAGATACAAGGTTCAGAAAGAGGCCATCCC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAAGGTTTCCACATAACTaGTACAATTCTCTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPRFPHN*YNSLLR
Trigger: TCTAAGCAGAGAATTGTATCAGTTATGTGGAAACCT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGGGATCCTCAAAACCCTaGTATTTCCTTACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQGSSKP*YFLTFN
Trigger: ATTAAAAGTAAGGAAATAGCAGGGTTTTGAGGATCC...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCTTGAAAGAAGTGACTTaGCCAAGGTCAACCATTATC +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGLKEVT*PRSTII
Trigger: GATAATGGTTGACCTTGGGCAAGTCACTTCTTTCAA...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGACAGTATGTAAATGCCTaGTCTTCACAGAGAGACACT +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRQYVNA*SSQRDT
Trigger: AGTGTCTCTCTGTGAAGACCAGGCATTTACATACTG...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAGTAGGCAGTTGCTATTaGCTTTTTAACAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRVGSCY*LFNRWA
Trigger: TGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTAC...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATAAAAGTTGGCAGGGTTaGAGGGTGCCTAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYKSWQG*RVPSTL
Trigger: CAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAGGTATATGTATTTCTaGCAAAGGTTTCCACATAAC +
Preference number: 4 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQRYMYF*QRFPHN
Trigger: GTTATGTGGAAACCTTTGCCAGAAATACATATACCT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAAATATCTTTTTCTTGTaGTCATCCATGGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATNIFFL*SSMGQN
Trigger: ATTCTGACCCATGGATGACCACAAGAAAAAGATATT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000209875.9
3UTR CAA 72 bp CCTCCTCAGGAGCTCTGGCCTATTTTTGTCCTATTCTaGTCTACCCTAATTGATATCCTTGGCTACATTTAT +
Preference number: 4 (lower is better)
Translates to: PPQELWPIFVLF*STLIDILGYIY
Trigger: ATAAATGTAGCCAAGGATATCAATTAGGGTAGACAAGAATAGGACAAAAATAGGCCAGAGCTCCTGAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATCTCCTCCTCATCCTCTaGAGAAGAACTGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYLLLIL*RRTVSC
Trigger: ACAGCTGACAGTTCTTCTTCAGAGGATGAGGAGGAG...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAAAATCTCAACCAAAATaGTGGGATCATGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRKSQPK*WDHGCK
Trigger: TTTGCACCCATGATCCCATCATTTTGGTTGAGATTT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGGCATGCTTGGTGGTCTaGTTACAAAAGTACGGATCT +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEACLVV*LQKYGS
Trigger: AGATCCGTACTTTTGTAATCAGACCACCAAGCATGC...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGACAACAGGTAGGCAGTTaGTATTGGCTTTTTAACAGA +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRQQVGS*YWLFNR
Trigger: TCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTG...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACCTACATTGCCCAGGCTaGTCTCAAACTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYLHCPG*SQTSGF
Trigger: GAAGCCAGAAGTTTGAGACCAGCCTGGGCAATGTAG...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGATACACTGGGCCACTTaGATAGGCTGTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEIHWAT*IGCHFL
Trigger: CAGAAAATGACAGCCTATCCAAGTGGCCCAGTGTAT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAAACACTAACAAATGCTaGAAGCAGGCATCTGATTTC +
Preference number: 4 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRNTNKC*KQASDF
Trigger: GAAATCAGATGCCTGCTTCCAGCATTTGTTAGTGTT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGTGCCACAGGCATGCTTaGTGGTCTGATTACAAAAGT +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYECHRHA*WSDYKS
Trigger: ACTTTTGTAATCAGACCACCAAGCATGCCTGTGGCA...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGTCTTGTGGTCATCCATaGGTCAGAATCGACAACATC +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYESCGHP*VRIDNI
Trigger: GATGTTGTCGATTCTGACCCATGGATGACCACAAGA...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGAAAAGCGACCAACCCTaGAAAGATCAAGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEKSDQP*KDQDSK
Trigger: CTTAGAGTCTTGATCTTTTCAGGGTTGGTCGCTTTT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTTCCAAGAGTCTGAGTaGAGATGTGGTTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYFQESE*RCGWKP
Trigger: AGGCTTCCAACCACATCTTCACTCAGACTCTTGGAA...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATAAAAGGCTGACAAACTaGCCACTTGGCCTTGAATCG +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYKRLTN*PLGLES
Trigger: CGATTCAAGGCCAAGTGGTCAGTTTGTCAGCCTTTT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGAGAGTGGACCAAAACTaGATTTTGTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYERVDQN*ILSMAT
Trigger: TGTTGCCATGGACAAAATCCAGTTTTGGTCCACTCT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCATCATGGGTGCAAAGTaGGTTTTTCCTTTAAATTGT +
Preference number: 4 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGIMGAK*VFPLNC
Trigger: ACAATTTAAAGGAAAAACCCACTTTGCACCCATGAT...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGAGGAGGCAGGGAGGTaGATGTATTATGTACAAAGA +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYEEAGR*MYYVQR
Trigger: TCTTTGTACATAATACATTCACCTCCCTGCCTCCTC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR TCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGATGGTAAGTAGTAGATaGTACTGGGGTTATTTCGGT +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEMVSSR*YWGYFG
Trigger: ACCGAAATAACCCCAGTATCATCTACTACTTACCAT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACCAGGTAAAGGTAGCATaGAACTGCAATACACTGGCT +
Preference number: 4 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYQVKVA*NCNTLA
Trigger: AGCCAGTGTATTGCAGTTTCATGCTACCTTTACCTG...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTCCTCAGGATATGCATaGCATGTCAGTCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYSSGYA*HVSLSS
Trigger: TGAAGAGAGACTGACATGGCATGCATATCCTGAGGA...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR GCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGCAACAGGTAGGCAGTTaGTATTGGCTTTTTAACAGA +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYEQQVGS*YWLFNR
Trigger: TCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTG...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR GCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATTCCAGGAGCCAAGAATaGAGGAGACATAACTGCTAT +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYSRSQE*RRHNCY
Trigger: ATAGCAGTTATGTCTCCTGCATTCTTGGCTCCTGGA...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGACTGCTCAGAGTAGATaGTCAGGTATTAACAGATGT +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYETAQSR*SGINRC
Trigger: ACATCTGTTAATACCTGAGCATCTACTCTGAGCAGT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATACAAATGGTGACCCCTaGTTTTCTATTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYTNGDP*FSIQGE
Trigger: CTCTCCCTGAATAGAAAAGCAGGGGTCACCATTTGT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATACCCCATTTGACAGATaGGGAACTGAGGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYTPFDR*GTEALK
Trigger: TTTCAATGCCTCAGTTCCCCATCTGTCAAATGGGGT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGAATCATATAGACTCTTaGATTCTTTCCTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SKHQAITHTYINIQSKYENHIDS*ILSSCE
Trigger: CTCACAGGAGGAAAGAATTCAAGAGTCTATATGATT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR GCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATCTCAACACTAACAAATaGTGGAAGCAGGCATCTGAT +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYLNTNK*WKQASD
Trigger: ATCAGATGCCTGCTTCCAGCATTTGTTAGTGTTGAG...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACCAATTATCCAGCACTTaGTCTAGGCCTTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYQLSST*SRPLIP
Trigger: AGGAATTAAAGGCCTAGATCAAGTGCTGGATAATTG...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATTTCCTCCAAAAGGGATaGGAAATTGAAAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYFLQKG*EIEKGV
Trigger: CACACCTTTTTCAATTTCTCATCCCTTTTGGAGGAA...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR TCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATAGAACAAGCTGTCAATaGACAGGAAAAATTCCATCT +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYRTSCQ*TGKIPS
Trigger: AGATGGAATTTTTCCTGTTCATTGACAGCTTGTTCT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACAAGCTTAATAAAAATTaGGTGAGGGGGCATCTAATT +
Preference number: 4 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYKLNKN*VRGHLI
Trigger: AATTAGATGCCCCCTCACCCAATTTTTATTAAGCTT...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CCA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGTACAGCAATGTGGCTaGAATTTAGAAAGCTTAATA +
Preference number: 4 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYVQQCG*NLESLI
Trigger: TATTAAGCTTTCTAAATTCCAGCCACATTGCTGTAC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS TCA 90 bp TTGAGAGTGATCACTCACGCTAACGTCTGCCCTGTTCCTGTATGGTaGGGCCGCACCACAAGCCACCACCGCCGCCGCCTTCTGCGCAAC +
Preference number: 5 (lower is better)
Translates to: LRVITHANVCPVPVW*GRTTSHHRRRLLRN
Trigger: GTTGCGCAGAAGGCGGCGGCGGTGGTGGCTTGTGGTGCGGCCTCACCATACAGGAACAGGGCAGACGTTAGCGTGAGTGATCACTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000618078.1
CDS-3UTR CAA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGGGGAGCAGAGGGAAGTaGGCAGGATACACCTCATTC +
Preference number: 5 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRGSRGK*AGYTSF
Trigger: GAATGAGGTGTATCCTGCCAACTTCCCTCTGCTCCC...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGGGTAACAGGAATGCTTaGGGAGGCCACAAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRGNRNA*GGHKSW
Trigger: CCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACC...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAGGGTGCCTAGCACCTaGGCACAAGCAAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQRVPST*AQASTR
Trigger: CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAAGGGTGCCTAGCACCTaGGCACAAGCAAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATRVPST*AQASTR
Trigger: CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGTCCTGGAATATGTTCTaGTGTTCTATGGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRSWNMF*CSMASW
Trigger: CCAGCTGGCCATAGAACACAAGAACATATTCCAGGA...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGGCTGCTAAGCTGTCCTaGGTAGCCTCTACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQAAKLS*VASTGQ
Trigger: TTGCCCAGTAGAGGCTACCAAGGACAGCTTAGCAGC...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGCCTCTCAGAGTGTACTaGGGAGCAGAGGGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQPLRVY*GAEGSW
Trigger: CCAACTTCCCTCTGCTCCCAAGTACACTCTGAGAGG...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp AAAAGTTGGCAGGGTTGGAGGGTGCCTAGCACCTTGGCACAAGCAAGCACCAGGAGAACAAAAGTTGTTTaGGCGGCACTCAGTACAATA +
Preference number: 5 (lower is better)
Translates to: KSWQGWRVPSTLAQASTRRTKVV*AALSTI
Trigger: TATTGTACTGAGTGCCGCCAAAACAACTTTTGTTCT...CCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGACCATTATCAATCAGTaGAGGAGGTGGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGTIINQ*RRWAHR
Trigger: TCTGTGTGCCCACCTCCTCAACTGATTGATAATGGT...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAAAAGTAGGGCATTTCTaGGGGGACAAAGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATKVGHF*GDKGRR
Trigger: CCTTCTGCCTTTGTCCCCCAAGAAATGCCCTACTTT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGGGAAGAGAACAAAAGTaGTTTTGGCGGCACTCAGTA +
Preference number: 5 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLGREQK*FWRHSV
Trigger: TACTGAGTGCCGCCAAAACAACTTTTGTTCTCTTCC...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGGACCAAAACTGGATTTaGTCCATGGCAACACTGTTC +
Preference number: 5 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLDQNWI*SMATLF
Trigger: GAACAGTGTTGCCATGGACAAAATCCAGTTTTGGTC...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGACCCTCTCTCCAGTATaGAATAAAACTGCACTGCTC +
Preference number: 5 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLTLSPV*NKTALL
Trigger: GAGCAGTGCAGTTTTATTCAATACTGGAGAGAGGGT...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CTCTTTCCTTGTCAGCTTTTGCCTCCAGTGCAGGATTCATTCCCTTCCCCACTGAACCAGAACACTGACTaGAGCCTTAAGAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LFPCQLLPPVQDSFPSPLNQNTD*SLKSVV
Trigger: CACAACACTCTTAAGGCTCAAGTCAGTGTTCTGGTT...CAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS CCA 90 bp TATGTGGCTTCGAGTGGCTTACAGAAATCCAACAAATCTGCATCTTaGACTCTGGACAAGCGAACTCTTCTCAGGATGACCTGGACTCCT +
Preference number: 5 (lower is better)
Translates to: YVASSGLQKSNKSAS*TLDKRTLLRMTWTP
Trigger: AGGAGTCCAGGTCATCCTGAGAAGAGTTCGCTTGTCCAGAGTCCAAGATGCAGATTTGTTGGATTTCTGTAAGCCACTCGAAGCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS-3UTR CAA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACATCAGGTTCCCAAGTATaGTGCTCCTCAGAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATSGSQV*CSSEKP
Trigger: AGGCTTTTCTGAGGAGCACAATACTTGGGAACCTGA...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCAACTGACCACTTGGCCTaGAATCGACTGTTAGGGTCA +
Preference number: 5 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPTDHLA*NRLLGS
Trigger: TGACCCTAACAGTCGATTCAAGGCCAAGTGGTCAGT...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS CCA 90 bp GGTAGAGCTCCTGGACAGACTAAACATAGGCAGCAGTTGTCACAGTaGGTGTTCTTCCAGCACAAGTGTAAAGCTGTCATCAGAAATGAA +
Preference number: 5 (lower is better)
Translates to: GRAPGQTKHRQQLSQ*VFFQHKCKAVIRNE
Trigger: TTCATTTCTGATGACAGCTTTACACTTGTGCTGGAAGAACACCCACTGTGACAACTGCTGCCTATGTTTAGTCTGTCCAGGAGCTCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS-3UTR CAA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAGCTGTTTCTTTCTCTTaGTTTTCCGCATCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATAVSFS*FSASSG
Trigger: TCCTGAGGATGCGGAAAACAAAGAGAAAGAAACAGC...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACGGGAGGCCACAAAAGTaGGCAGGGTTGGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYGRPQK*AGLEGA
Trigger: GGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCCC...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGAGGTTTGAAGCCTCTTaGGTAACAGGAATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQRFEAS*VTGMLW
Trigger: CCAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCT...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp TCTTTGGTAACAGGAATGCTTTGGGAGGCCACAAAAGTTGGCAGGGTTGGAGGGGAAAAATATCCGTATTaGAAAAGGCAGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SLVTGMLWEATKVGRVGGEKYPY*KRQQEL
Trigger: CAACTCCTGCTGCCTTTTCAAATACGGATATTTTTC...CCCTCCAACCCTGCCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp AACTCCCACCCACTTGAGGTATGGTTTATGAGCTCTTGCCCAATCACATTACCACAGTATGAAAGTTATTaGAGGGCAGGGATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: NSHPLEVWFMSSCPITLPQYESY*RAGMAS
Trigger: AGAGGCCATCCCTGCCCTCAAATAACTTTCATACTG...TGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGTGTCATCGGCACTGTTaGAGAAATTGGATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQCHRHC*RNWISS
Trigger: AGAGGAAATCCAATTTCTCAAACAGTGCCGATGACA...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp ATTACCTATAACCACAGCAGCCACATGCCCCAGGTTTCTCAGAACCAATCTCAGTCCAGCAACCAGTTATaGATGATTCATGGCCTACAT +
Preference number: 5 (lower is better)
Translates to: ITYNHSSHMPQVSQNQSQSSNQL*MIHGLH
Trigger: ATGTAGGCCATGAATCATCAATAACTGGTTGCTGGA...CTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTATAGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp GGAAAGCCCCAACAGGTAGGCAGTTGCTATTGGCTTTTTAACAGATGGGCAACAAACTCTACCACTACTTaGGCCAAGAATCTAAACCAG +
Preference number: 5 (lower is better)
Translates to: GKPQQVGSCYWLFNRWATNSTTT*AKNLNQ
Trigger: CTGGTTTAGATTCTTGGCCAAAGTAGTGGTAGAGTT...TGTTGCCCATCTGTTAAAAAGCCAATAGCAACTGCCTACCTGTTGGGGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp GTGAGGGTGACACGAGACAAACACCAAACTCACCACCAGCCCTCGTTTAGAATCATAAATATCTTTTTCTaGTGGTCATCCATGGGTCAG +
Preference number: 5 (lower is better)
Translates to: VRVTRDKHQTHHQPSFRIINIFF*WSSMGQ
Trigger: CTGACCCATGGATGACCACAAGAAAAAGATATTTAT...GATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATACCAGGTCCCCGGGATaGAGAGTGATCACTCACGCT +
Preference number: 5 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYTRSPG*RVITHA
Trigger: AGCGTGAGTGATCACTCTCAATCCCGGGGACCTGGT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCAGCTCTGGCCTATTTTaGTCCTATTCTTGTCTACCC +
Preference number: 5 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGSSGLF*SYSCLP
Trigger: GGGTAGACAAGAATAGGACAAAAATAGGCCAGAGCT...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAGCTGTTTCTTTCTCTTaGTTTTCCGCATCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRAVSFS*FSASSG
Trigger: TCCTGAGGATGCGGAAAACAAAGAGAAAGAAACAGC...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCGTCTTTTCTCCCCCTTaGGATTTACTTTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGVFSPP*DLLWIL
Trigger: CAGAATCCAAAGTAAATCCAAAGGGGGAGAAAAGAC...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGATATTTTGGGGACTCTaGGTGGTAAATCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SKHQAITHTYINIQSKYEIFWGL*VVNPGA
Trigger: GGCTCCTGGATTTACCACCAAGAGTCCCCAAAATAT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS GCA 90 bp TCCCTCATTTCAAAGGGTAAATTGAGGCTACTGCAGGATACAATTTaGCCCAAAGAAATTGGCAGATCTGAGAAGAGAAACTCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SLISKGKLRLLQDTI*PKEIGRSEKRNSER
Trigger: TCTTTCTGAGTTTCTCTTCTCAGATCTGCCAATTTCTTTGGGGCAAATTGTATCCTGCAGTAGCCTCAATTTACCCTTTGAAATGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS CCA 90 bp TGTTCTTCCAGCACAAGTGTAAAGCTGTCATCAGAAATGAATATGTaGCTTCGAGTGGCTTACAGAAATCCAACAAATCTGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: CSSSTSVKLSSEMNM*LRVAYRNPTNLHLG
Trigger: TCCAAGATGCAGATTTGTTGGATTTCTGTAAGCCACTCGAAGCCACATATTCATTTCTGATGACAGCTTTACACTTGTGCTGGAAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGGTAACAGGAATGCTTaGGGAGGCCACAAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYGNRNA*GGHKSW
Trigger: CCAACTTTTGTGGCCTCCCAAAGCATTCCTGTTACC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp ATTCCTATAGAACCAGCTGCAGGTAGGCAGGAAGAGAACAAAAGTTGTTTTGGCCCAAAACGAAGTATTTaGCTGAGTAAGAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: IPIEPAAGRQEENKSCFGPKRSI*LSKKKR
Trigger: CCTTTTCTTCTTACTCAGCAAAATACTTCGTTTTGG...GCCAAAACAACTTTTGTTCTCTTCCTGCCTACCTGCAGCTGGTTCTATAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAAAACCAAAAGCTTCATaGTTCCAGTCTGTCATGTCA +
Preference number: 5 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRKPKAS*FQSVMS
Trigger: TGACATGACAGACTGGAACAATGAAGCTTTTGGTTT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGCATTTGATCTTAACTaGAAGGCCATCTGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYAFDLN*KAICPA
Trigger: GGCTGGGCAGATGGCCTTCAAGTTAAGATCAAATGC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAATTGAAAGAAGTGACTaGCCCAAGGTCAACCATTAT +
Preference number: 5 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRIERSD*PKVNHY
Trigger: ATAATGGTTGACCTTGGGCAAGTCACTTCTTTCAAT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTGGGGAACTGAGGCATaGAAAGAAGTGACTTGCCCA +
Preference number: 5 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYWGTEA*KEVTCP
Trigger: TGGGCAAGTCACTTCTTTCAATGCCTCAGTTCCCCA...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTCAGGTTCCCAAGTATaGTGCTCCTCAGAAAAGCCT +
Preference number: 5 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYSGSQV*CSSEKP
Trigger: AGGCTTTTCTGAGGAGCACAATACTTGGGAACCTGA...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGAATAAGACTTCGATTTTaGATACCAACAATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRIRLRF*IPTMSP
Trigger: TGGGGACATTGTTGGTATCAAAAATCGAAGTCTTAT...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp TTCCATCTCAACATGTCAGAACAAAGGCCAGCTAGTCAGCAACATGTTCTAAGACCCTTTGGATTTACTTaGGATTCTGGTAGAAATCAT +
Preference number: 5 (lower is better)
Translates to: FHLNMSEQRPASQQHVLRPFGFT*DSGRNH
Trigger: ATGATTTCTACCAGAATCCAAAGTAAATCCAAAGGG...TCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGCATCCACTCGATTCTaGTTCCATTTCCCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYASTRF*FHFPEH
Trigger: ATGCTCTGGGAAATGGAACAAGAATCGAGTGGATGC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATAGGTTTGAAGCCTCTTaGGTAACAGGAATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYRFEAS*VTGMLW
Trigger: CCAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCT...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTGTCATCGGCACTGTTaGAGAAATTGGATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYCHRHC*RNWISS
Trigger: AGAGGAAATCCAATTTCTCAAACAGTGCCGATGACA...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATCACTTAAAATTGATATaGTGGCCAACAGCTCACCTC +
Preference number: 5 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYHLKLI*WPTAHL
Trigger: GAGGTGAGCTGTTGGCCACAATATCAATTTTAAGTG...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000439541.6
CDS-3UTR CAA 90 bp AGCAAGCACCAGGCAATCACTCACACCTACATAAATATACAGTCTAAATATGAGATTCAGAACATGTTTTaGGGTGTAAGGCTAGTATCA +
Preference number: 5 (lower is better)
Translates to: SKHQAITHTYINIQSKYEIQNMF*GVRLVS
Trigger: TGATACTAGCCTTACACCCAAAAACATGTTCTGAAT...CTCATATTTAGACTGTATATTTATGTAGGTGTGAGTGATTGCCTGGTGCTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS TCA 90 bp GAGGTTTGCTATGTTTTATCAGATCTTAGGCATAATTTATTGTTGTaGAACACTGAACAAATTAGCAGTATATTACCCTCCACAACTCCC +
Preference number: 5 (lower is better)
Translates to: EVCYVLSDLRHNLLL*NTEQISSILPSTTP
Trigger: GGGAGTTGTGGAGGGTAATATACTGCTAATTTGTTCAGTGTTTCACAACAATAAATTATGCCTAAGATCTGATAAAACATAGCAAACCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS-3UTR CAA 90 bp ATACCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACGAATGGGTATATGATTaGCATATTATGTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: IPYMIIKTIVPYPIILMYEWVYD*HIMWLI
Trigger: GATGAGCCACATAATATGCAAATCATATACCCATTC...GTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS-3UTR CAA 90 bp CCATATATGATAATAAAGACAATTGTACCCTACCCCATCATCCTCATGTACTATGAAAATCTCTTGTCATaGGAAAGCATGTCCGTTTTA +
Preference number: 5 (lower is better)
Translates to: PYMIIKTIVPYPIILMYYENLLS*ESMSVL
Trigger: TAAAACGGACATGCTTTCCAATGACAAGAGATTTTC...ATAGTACATGAGGATGATGGGGTAGGGTACAATTGTCTTTATTATCATATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000209875.9
CDS TCA 72 bp ATCACTCACGCTAACGTCTGCCCTGTTCCTGTATGGTaGGGCCGCACCACAAGCCACCACCGCCGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: ITHANVCPVPVW*GRTTSHHRRRL
Trigger: AAGGCGGCGGCGGTGGTGGCTTGTGGTGCGGCCTCACCATACAGGAACAGGGCAGACGTTAGCGTGAGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000209875.9
ENST00000618078.1
CDS CAA 90 bp ATATGTGGCTTCGAGTGGCTTACAGAAATCCAACAAATCTGCATCTaGGACTCTGGACAAGCGAACTCTTCTCAGGATGACCTGGACTCC +
Preference number: 6 (lower is better)
Translates to: ICGFEWLTEIQQICI*DSGQANSSQDDLDS
Trigger: GGAGTCCAGGTCATCCTGAGAAGAGTTCGCTTGTCCAGAGTCCAAGATGCAGATTTGTTGGATTTCTGTAAGCCACTCGAAGCCACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS CAA 90 bp ATGCTAGTTGGTAGAGCTCCTGGACAGACTAAACATAGGCAGCAGTaGTCACAGTGGGTGTTCTTCCAGCACAAGTGTAAAGCTGTCATC +
Preference number: 6 (lower is better)
Translates to: MLVGRAPGQTKHRQQ*SQWVFFQHKCKAVI
Trigger: GATGACAGCTTTACACTTGTGCTGGAAGAACACCCACTGTGACAACTGCTGCCTATGTTTAGTCTGTCCAGGAGCTCTACCAACTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS GCA 72 bp ATGCATGCAGTTAAGCATTGTGGCTATGGCCTCCCCTaGCTCACCAGGAAAAACAAGGATTTACATGTGTTC +
Preference number: 6 (lower is better)
Translates to: MHAVKHCGYGLP*LTRKNKDLHVF
Trigger: GAACACATGTAAATCCTTGTTTTTCCTGGTGAGGCAGGGGAGGCCATAGCCACAATGCTTAACTGCATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550411.5
CDS GCA 72 bp TGTGGCTTCGAGTGGCTTACAGAAATCCAACAAATCTaGATCTTGGACTCTGGACAAGCGAACTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: CGFEWLTEIQQI*ILDSGQANSSQ
Trigger: CTGAGAAGAGTTCGCTTGTCCAGAGTCCAAGATGCAGATTTGTTGGATTTCTGTAAGCCACTCGAAGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS CCA 72 bp GGCGGATCACCTGATGTCAAGGGTTCTAGACCAGCCTaGCAAACTGGTGAAATCCTGTCTCTATCAAAAATA +
Preference number: 6 (lower is better)
Translates to: GGSPDVKGSRPA*QTGEILSLSKI
Trigger: TATTTTTGATAGAGACAGGATTTCACCAGTTTGCCAGGCTGGTCTAGAACCCTTGACATCAGGTGATCCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS GCA 72 bp TCAAAGGGTAAATTGAGGCTACTGCAGGATACAATTTaGCCCAAAGAAATTGGCAGATCTGAGAAGAGAAAC +
Preference number: 6 (lower is better)
Translates to: SKGKLRLLQDTI*PKEIGRSEKRN
Trigger: GTTTCTCTTCTCAGATCTGCCAATTTCTTTGGGGCAAATTGTATCCTGCAGTAGCCTCAATTTACCCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618078.1
CDS TCA 72 bp AAAGGCTTGCTTAGGCACCTTTCACCACATTTTCAGTaGCTTGGTACATTTCCCTTAAACAAATTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: KGLLRHLSPHFQ*LGTFPLNKLSL
Trigger: CAAGCTCAATTTGTTTAAGGGAAATGTACCAAGTCACTGAAAATGTGGTGAAAGGTGCCTAAGCAAGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552562.1