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Pregenerated sensors for CBX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108468

Ensembl transcript IDs: ENST00000393408.7, ENST00000581003.5

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCGACAGGCGAAGAGCTCAGCGCGGGAAGCGGAGAAGCAGGACGCTaGACCCGGGCGCGCTCCCCGCTCCTAACCTCCGCCTCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: ATGEELSAGSGEAGR*TRARSPLLTSASKA
Trigger: CGCTTTCGAGGCGGAGGTTAGGAGCGGGGAGCGCGCCCGGGTCCAGCGTCCTGCTTCTCCGCTTCCCGCGCTGAGCTCTTCGCCTGTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS CCA 90 bp TCTGGCTCAGGATTCGCGCCCCGCCCTCTCCATCCTTCACGCAGCTaGCACCGACGCCTCAGCGACAGGCGAAGAGCTCAGCGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: SGSGFAPRPLHPSRS*HRRLSDRRRAQRGK
Trigger: CTTCCCGCGCTGAGCTCTTCGCCTGTCGCTGAGGCGTCGGTGCCAGCTGCGTGAAGGATGGAGAGGGCGGGGCGCGAATCCTGAGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS GCA 90 bp AGCCGGACCCGGCGTCTTCCGAATACAGTTACAAACCTCGGGTTGTaGGGTCGTATGCGCCTCCTCACGCCTATCCAAGCCTCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: SRTRRLPNTVTNLGL*GRMRLLTPIQASSL
Trigger: CAGGCTTGAGGCTTGGATAGGCGTGAGGAGGCGCATACGACCGCACAACCCGAGGTTTGTAACTGTATTCGGAAGACGCCGGGTCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS GCA 90 bp GGCGTCTTCCGAATACAGTTACAAACCTCGGGTTGTGCGGTCGTATaGGCCTCCTCACGCCTATCCAAGCCTCAAGCCTGTCCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: GVFRIQLQTSGCAVV*ASSRLSKPQACPLP
Trigger: CGGAAGGGGACAGGCTTGAGGCTTGGATAGGCGTGAGGAGGCGCATACGACCGCACAACCCGAGGTTTGTAACTGTATTCGGAAGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS CCA 72 bp GAAGAGCTCAGCGCGGGAAGCGGAGAAGCAGGACGCTaGACCCGGGCGCGCTCCCCGCTCCTAACCTCCGCC +
Preference number: 6 (lower is better)
Translates to: EELSAGSGEAGR*TRARSPLLTSA
Trigger: GGCGGAGGTTAGGAGCGGGGAGCGCGCCCGGGTCCAGCGTCCTGCTTCTCCGCTTCCCGCGCTGAGCTCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS CAA 72 bp TTCCGCCCTATCCCGCAGCCGCCCAGCCAAGCAACATaGTTCCAGACCACCCGGGCCCCGAAGAGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: FRPIPQPPSQAT*FQTTRAPKSGP
Trigger: GGGGCCGCTCTTCGGGGCCCGGGTGGTCTGGAACAATGTTGCTTGGCTGGGCGGCTGCGGGATAGGGCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS CCA 72 bp GGATTCGCGCCCCGCCCTCTCCATCCTTCACGCAGCTaGCACCGACGCCTCAGCGACAGGCGAAGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: GFAPRPLHPSRS*HRRLSDRRRAQ
Trigger: CTGAGCTCTTCGCCTGTCGCTGAGGCGTCGGTGCCAGCTGCGTGAAGGATGGAGAGGGCGGGGCGCGAATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS CAA 90 bp CCCAGCCGGACCCGGCGTCTTCCGAATACAGTTACAAACCTCGGGTaGTGCGGTCGTATGCGCCTCCTCACGCCTATCCAAGCCTCAAGC +
Preference number: 6 (lower is better)
Translates to: PSRTRRLPNTVTNLG*CGRMRLLTPIQASS
Trigger: GCTTGAGGCTTGGATAGGCGTGAGGAGGCGCATACGACCGCACAACCCGAGGTTTGTAACTGTATTCGGAAGACGCCGGGTCCGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS GCA 72 bp CGGCGTCTTCCGAATACAGTTACAAACCTCGGGTTGTaGGGTCGTATGCGCCTCCTCACGCCTATCCAAGCC +
Preference number: 6 (lower is better)
Translates to: RRLPNTVTNLGL*GRMRLLTPIQA
Trigger: GGCTTGGATAGGCGTGAGGAGGCGCATACGACCGCACAACCCGAGGTTTGTAACTGTATTCGGAAGACGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS CAA 72 bp ACCCGGCGTCTTCCGAATACAGTTACAAACCTCGGGTaGTGCGGTCGTATGCGCCTCCTCACGCCTATCCAA +
Preference number: 6 (lower is better)
Translates to: TRRLPNTVTNLG*CGRMRLLTPIQ
Trigger: TTGGATAGGCGTGAGGAGGCGCATACGACCGCACAACCCGAGGTTTGTAACTGTATTCGGAAGACGCCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS GCA 72 bp CGAATACAGTTACAAACCTCGGGTTGTGCGGTCGTATaGGCCTCCTCACGCCTATCCAAGCCTCAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: RIQLQTSGCAVV*ASSRLSKPQAC
Trigger: ACAGGCTTGAGGCTTGGATAGGCGTGAGGAGGCGCATACGACCGCACAACCCGAGGTTTGTAACTGTATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393408.7
CDS CCA 72 bp TACTTGGGAGGCAGAGGCAGAAGAATTGCTACAACCTaGGAGGTGGAGGTTACAGTGTGCCAAGATCGCGCC +
Preference number: 6 (lower is better)
Translates to: YLGGRGRRIATT*EVEVTVCQDRA
Trigger: GGCGCGATCTTGGCACACTGTAACCTCCACCTCCCAGGTTGTAGCAATTCTTCTGCCTCTGCCTCCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581003.5