Pregenerated sensors for CBWD6 (Homo sapiens)
Ensembl gene IDs: ENSG00000215126Ensembl transcript IDs: ENST00000382436.7, ENST00000486387.6, ENST00000494538.6, ENST00000610358.4, ENST00000610377.4, ENST00000617722.4, ENST00000617917.4
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTC | + |
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Preference number: 3 (lower is better) Translates to: SLLLWALSICSD*ERVSGWDDFIL Trigger: GAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS-3UTR TCA 90 bp | CTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGATGAGTCTATCAGCTGCTaGGCCTTGATCTTTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LLWALSICSDWERVSGWDESISC*ALIFVF Trigger: AAACACAAAGATCAAGGCTCAGCAGCTGATAGACTC...ATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS-3UTR TCA 90 bp | TGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGGGTCAGTGGGTGGGATaGTTTCATTCTCTTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CPILCCFGPYPYAQIGNGGQWVG*FHSLLP Trigger: AGGCAGAAGAGAATGAAATCATCCCACCCACTGACC...CCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS-3UTR CCA 90 bp | TGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGAATTCTTTGCTGCTTTaGGCCCTATCCATATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CPILCCFGPYPYAQIGNGNSLLL*ALSICS Trigger: TGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATT...CCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS-3UTR TCA 90 bp | TGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGCTAAATTTCTGCCAATaGGGACCAATCGATTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CPILCCFGPYPYAQIGNGLNFCQ*GPIDLF Trigger: GAACAAATCGATTGGTCCTCATTGGCAGAAATTTAG...CCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS-3UTR CAA 90 bp | GCTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGAATAGCTCTAAGGCCATaGTCCTTCACTGAACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: AALGPIHMLRLGTGQWVGIALRP*SFTEQQ Trigger: CTGCTGTTCAGTGAAGGACAATGGCCTTAGAGCTAT...TCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS TCA 90 bp | CTGCTTCCAAGATGGTATCTCAAAAGCTGTGTCCTCCTGAGGGGATaGACAATGTGTGTTCACAGTTCCACATGGCTGGAGAGGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LLPRWYLKSCVLLRG*TMCVHSSTWLERPH Trigger: GTGAGGCCTCTCCAGCCATGTGGAACTGTGAACACACATTGTTCATCCCCTCAGGAGGACACAGCTTTTGAGATACCATCTTGGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS-3UTR CAA 90 bp | TGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGATCCATATGCTCAGATaGGGAACGGGTCAGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CPILCCFGPYPYAQIGNGIHMLR*GTGQWV Trigger: CACCCACTGACCCGTTCCCAATCTGAGCATATGGAT...CCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS TCA 90 bp | GCTGGTCTCTGCTTCCAAGATGGTATCTCAAAAGCTGTGTCCTCCTaGGGGGATGAACAATGTGTGTTCACAGTTCCACATGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGLCFQDGISKAVSS*GDEQCVFTVPHGWR Trigger: TCTCCAGCCATGTGGAACTGTGAACACACATTGTTCATCCCCTCAGGAGGACACAGCTTTTGAGATACCATCTTGGAAGCAGAGACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS-3UTR CAA 90 bp | TGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGCAATTCTTTGCTGCTTaGGGCCCTATCCATATGCTC | + |
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Preference number: 5 (lower is better) Translates to: CPILCCFGPYPYAQIGNGQFFAA*GPIHML Trigger: GAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTG...CCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS-3UTR CAA 90 bp | TGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGAAGTTGTCCAATTCTTaGCTGCTTTGGGCCCTATCC | + |
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Preference number: 5 (lower is better) Translates to: CPILCCFGPYPYAQIGNGKLSNS*LLWALS Trigger: GGATAGGGCCCAAAGCAGCAAAGAATTGGACAACTT...CCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494538.6 |
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| CDS CCA 90 bp | TTGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTCTTCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LSNSLLLWALSICSD*ERVSGWDDFILFCL Trigger: AAGGCAGAAGAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494538.6 ENST00000610358.4 |
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| CDS CCA 90 bp | TCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTCTTCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SLLLNVLWALSICSD*ERVSGWDDFILFCL Trigger: AAGGCAGAAGAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000382436.7 ENST00000486387.6 ENST00000610377.4 ENST00000617722.4 |
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| CDS TCA 90 bp | TCACAATCATGGCAGAAGGTGAAAGGCATGTCTCACATTTTAAAATaGGTCATGGCTTCTCAACCGTCTCCCAAAGTCTTAATTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: SQSWQKVKGMSHILK*VMASQPSPKVLIHF Trigger: GAAATGAATTAAGACTTTGGGAGACGGTTGAGAAGCCATGACTCATTTTAAAATGTGAGACATGCCTTTCACCTTCTGCCATGATTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS TCA 72 bp | GGCCAAGGTGGGCGGATCACTTTGAGGCCAGGAGTTTaGCACCAACCTGGCCAATGTGGCGAAACCGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GQGGRITLRPGV*HQPGQCGETVS Trigger: AGAGACGGTTTCGCCACATTGGCCAGGTTGGTGTCAAACTCCTGGCCTCAAAGTGATCCGCCCACCTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617917.4 |
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| CDS TCA 72 bp | CTCAAAAGTCCACAGTCCGAAGTCCAAAGTCTCATCTaGGACAAGGCAAGTCCCTTCCACCTATGGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LKSPQSEVQSLI*DKASPFHLWAC Trigger: ACAGGCCCATAGGTGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTGGACTTCGGACTGTGGACTTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS GCA 72 bp | GTGCCAGGAAGTTTGTGTCTAGTGAGGGCTGGTCTCTaGTTCCAAGATGGTATCTCAAAAGCTGTGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VPGSLCLVRAGL*FQDGISKAVSS Trigger: GGAGGACACAGCTTTTGAGATACCATCTTGGAAGCAGAGACCAGCCCTCACTAGACACAAACTTCCTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS CCA 72 bp | GGGGATGAACAATGTGTGTTCACAGTTCCACATGGCTaGAGAGGCCTCACAATCATGGCAGAAGGTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GDEQCVFTVPHG*RGLTIMAEGER Trigger: CCTTTCACCTTCTGCCATGATTGTGAGGCCTCTCCAGCCATGTGGAACTGTGAACACACATTGTTCATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS TCA 72 bp | AGATGGTATCTCAAAAGCTGTGTCCTCCTGAGGGGATaGACAATGTGTGTTCACAGTTCCACATGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RWYLKSCVLLRG*TMCVHSSTWLE Trigger: CTCCAGCCATGTGGAACTGTGAACACACATTGTTCATCCCCTCAGGAGGACACAGCTTTTGAGATACCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS CAA 72 bp | GAGGCTATGAAGTCCAAAATCAAGGTGCCAGGAAGTTaGTGTCTAGTGAGGGCTGGTCTCTGCTTCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: EAMKSKIKVPGS*CLVRAGLCFQD Trigger: ATCTTGGAAGCAGAGACCAGCCCTCACTAGACACAAACTTCCTGGCACCTTGATTTTGGACTTCATAGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS CAA 90 bp | ACAGTTCTAGAGGCTATGAAGTCCAAAATCAAGGTGCCAGGAAGTTaGTGTCTAGTGAGGGCTGGTCTCTGCTTCCAAGATGGTATCTCA | + |
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Preference number: 6 (lower is better) Translates to: TVLEAMKSKIKVPGS*CLVRAGLCFQDGIS Trigger: TGAGATACCATCTTGGAAGCAGAGACCAGCCCTCACTAGACACAAACTTCCTGGCACCTTGATTTTGGACTTCATAGCCTCTAGAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS TCA 72 bp | TGCTTCCAAGATGGTATCTCAAAAGCTGTGTCCTCCTaGGGGGATGAACAATGTGTGTTCACAGTTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: CFQDGISKAVSS*GDEQCVFTVPH Trigger: ATGTGGAACTGTGAACACACATTGTTCATCCCCTCAGGAGGACACAGCTTTTGAGATACCATCTTGGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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| CDS TCA 72 bp | TGGCAGAAGGTGAAAGGCATGTCTCACATTTTAAAATaGGTCATGGCTTCTCAACCGTCTCCCAAAGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: WQKVKGMSHILK*VMASQPSPKVL Trigger: TAAGACTTTGGGAGACGGTTGAGAAGCCATGACTCATTTTAAAATGTGAGACATGCCTTTCACCTTCTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617722.4 |
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