Pregenerated sensors for CBWD5 (Homo sapiens)
Ensembl gene IDs: ENSG00000147996Ensembl transcript IDs: ENST00000441808.5, ENST00000476161.5, ENST00000476797.5, ENST00000480229.5, ENST00000485088.5, ENST00000497250.5
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTC | + |
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Preference number: 3 (lower is better) Translates to: LNVLWALSICSD*ERVSGWDDFIL Trigger: GAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000476161.5 ENST00000480229.5 ENST00000497250.5 |
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| CDS-3UTR TCA 90 bp | GTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGATAGCAGGAGAATCGCTTaGACCCAGGAGGCAGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VLWALSICSDWERVSGWDSRRIA*TQEAVV Trigger: AACCACTGCCTCCTGGGTTCAAGCGATTCTCCTGCT...ATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480229.5 |
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| CDS-3UTR GCA 90 bp | GTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGATTGGGCCCTATCCATATaGTCAGATTGGGAACGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VLWALSICSDWERVSGWDWALSI*SDWERV Trigger: GACCCGTTCCCAATCTGAGCATATGGATAGGGCCCA...ATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000476161.5 ENST00000480229.5 ENST00000497250.5 |
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| CDS-3UTR GCA 90 bp | TGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGATGGGCCCTATCCATATaGTCAGATTGGGAACGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CALGPIHMLRLGTGQWVGWALSI*SDWERV Trigger: GACCCGTTCCCAATCTGAGCATATGGATAGGGCCCA...TCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000476161.5 ENST00000480229.5 ENST00000497250.5 |
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| CDS-3UTR GCA 90 bp | TGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGATCTGCCAAAGCAACTTaGCTAGTAGCTTCATTGATA | + |
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Preference number: 4 (lower is better) Translates to: CALGPIHMLRLGTGQWVGSAKAT*LVASLI Trigger: TATCAATGAAGCTACTAGGCAAGTTGCTTTGGCAGA...TCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476161.5 ENST00000497250.5 |
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| CDS-3UTR GCA 90 bp | GTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGATTCTGCCAAAGCAACTTaGCTAGTAGCTTCATTGATA | + |
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Preference number: 4 (lower is better) Translates to: VLWALSICSDWERVSGWDSAKAT*LVASLI Trigger: TATCAATGAAGCTACTAGGCAAGTTGCTTTGGCAGA...ATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476161.5 ENST00000497250.5 |
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| CDS-3UTR CAA 90 bp | GTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGTGGGATCCACCGCACTCCAACTaGGGGGACACAGTGAGATTC | + |
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Preference number: 5 (lower is better) Translates to: VLWALSICSDWERVSGWDPPHSN*GDTVRF Trigger: GAATCTCACTGTGTCCCCCAAGTTGGAGTGCGGTGG...ATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480229.5 |
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| CDS TCA 90 bp | GCTGGTCTCTGCTTCCAAGATGGTACCTCAAAAGCTGTGTCCTCCTaGGGGGATGAACACTGTGTGTTCACCTGGCAGAAGGAGACAGAA | + |
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Preference number: 5 (lower is better) Translates to: AGLCFQDGTSKAVSS*GDEHCVFTWQKETE Trigger: TTCTGTCTCCTTCTGCCAGGTGAACACACAGTGTTCATCCCCTCAGGAGGACACAGCTTTTGAGGTACCATCTTGGAAGCAGAGACCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441808.5 |
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| CDS TCA 90 bp | CTGCTTCCAAGATGGTACCTCAAAAGCTGTGTCCTCCTGAGGGGATaGACACTGTGTGTTCACCTGGCAGAAGGAGACAGAAATAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: LLPRWYLKSCVLLRG*TLCVHLAEGDRNKL Trigger: AAGCTTATTTCTGTCTCCTTCTGCCAGGTGAACACACAGTGTTCATCCCCTCAGGAGGACACAGCTTTTGAGGTACCATCTTGGAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441808.5 |
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| CDS TCA 72 bp | GGCCAAGGTGGGCGGATCACTTTGAGGCCAGGAGTTTaGCACCAACCTAGCCAATGTGGCGAAACCGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GQGGRITLRPGV*HQPSQCGETVS Trigger: AGAGACGGTTTCGCCACATTGGCTAGGTTGGTGTCAAACTCCTGGCCTCAAAGTGATCCGCCCACCTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485088.5 |
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| CDS TCA 72 bp | AGATGGTACCTCAAAAGCTGTGTCCTCCTGAGGGGATaGACACTGTGTGTTCACCTGGCAGAAGGAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: RWYLKSCVLLRG*TLCVHLAEGDR Trigger: TCTGTCTCCTTCTGCCAGGTGAACACACAGTGTTCATCCCCTCAGGAGGACACAGCTTTTGAGGTACCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441808.5 |
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| CDS CCA 72 bp | AATCAACGTGCCAGGAAGTTTGTGTCTAGTGAGGGCTaGTCTCTGCTTCCAAGATGGTACCTCAAAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: NQRARKFVSSEG*SLLPRWYLKSC Trigger: ACAGCTTTTGAGGTACCATCTTGGAAGCAGAGACCAGCCCTCACTAGACACAAACTTCCTGGCACGTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441808.5 |
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| CDS CAA 72 bp | GAGGCTATGAAGTCCAAAATCAACGTGCCAGGAAGTTaGTGTCTAGTGAGGGCTGGTCTCTGCTTCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: EAMKSKINVPGS*CLVRAGLCFQD Trigger: ATCTTGGAAGCAGAGACCAGCCCTCACTAGACACAAACTTCCTGGCACGTTGATTTTGGACTTCATAGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441808.5 |
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| CDS CAA 90 bp | AAAGTTCTAGAGGCTATGAAGTCCAAAATCAACGTGCCAGGAAGTTaGTGTCTAGTGAGGGCTGGTCTCTGCTTCCAAGATGGTACCTCA | + |
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Preference number: 6 (lower is better) Translates to: KVLEAMKSKINVPGS*CLVRAGLCFQDGTS Trigger: TGAGGTACCATCTTGGAAGCAGAGACCAGCCCTCACTAGACACAAACTTCCTGGCACGTTGATTTTGGACTTCATAGCCTCTAGAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441808.5 |
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| CDS CAA 72 bp | ACAGCTTTCAAACTAGGGCTCAGGAGAAAAACAAACTaGGGTAAGGAGAGTGGAGTATTAAAAATATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: TAFKLGLRRKTN*GKESGVLKIFP Trigger: GGGAAATATTTTTAATACTCCACTCTCCTTACCCAAGTTTGTTTTTCTCCTGAGCCCTAGTTTGAAAGCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000476797.5 |
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