Pregenerated sensors for CBWD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000172785Ensembl transcript IDs: ENST00000377447.7, ENST00000465014.6, ENST00000475411.5, ENST00000487575.6, ENST00000495302.5, ENST00000611457.4, ENST00000612045.4, ENST00000616803.4, ENST00000616944.4, ENST00000618061.4, ENST00000618361.4, ENST00000619157.4
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTTTTCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: SLLLNVLWALSICSD*ERVSGWDDFILFCL Trigger: AAGGCAGAAAAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616803.4 |
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| 3UTR-3UTR GCA 90 bp | GTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGTGGGCCCTATCCATATaGTCAGATTGGGAACGGGTC | + |
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Preference number: 2 (lower is better) Translates to: VKCALGPIHMLRLGTGQWWALSI*SDWERV Trigger: GACCCGTTCCCAATCTGAGCATATGGATAGGGCCCA...CCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000465014.6 ENST00000616803.4 ENST00000616944.4 ENST00000618061.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR-3UTR GCA 90 bp | GGACAGAGTGAGATTCTGTCTCAAACCAGAGTGAGATTCTGTCTAAGGCCTCTGTGGGCCCTATCCATATaGTCAGATTGGGAACGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GQSEILSQTRVRFCLRPLWALSI*SDWERV Trigger: GACCCGTTCCCAATCTGAGCATATGGATAGGGCCCA...CAGAGGCCTTAGACAGAATCTCACTCTGGTTTGAGACAGAATCTCACTCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618361.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGTGGGCCCTATCCATATaGTCAGATTGGGAACGGGTC | + |
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Preference number: 2 (lower is better) Translates to: FSSVKCALGPIHMLRLGTWALSI*SDWERV Trigger: GACCCGTTCCCAATCTGAGCATATGGATAGGGCCCA...CGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000465014.6 ENST00000616803.4 ENST00000616944.4 ENST00000618061.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR-3UTR CCA 90 bp | GTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGGAACGGGTCAGTGGGTaGGATGATTTCATTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VKCALGPIHMLRLGTGQWERVSG*DDFILF Trigger: GAAAAGAATGAAATCATCCCACCCACTGACCCGTTC...CCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000465014.6 ENST00000616803.4 ENST00000616944.4 ENST00000618061.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR-3UTR CCA 90 bp | GGACAGAGTGAGATTCTGTCTCAAACCAGAGTGAGATTCTGTCTAAGGCCTCTGGAACGGGTCAGTGGGTaGGATGATTTCATTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GQSEILSQTRVRFCLRPLERVSG*DDFILF Trigger: GAAAAGAATGAAATCATCCCACCCACTGACCCGTTC...CAGAGGCCTTAGACAGAATCTCACTCTGGTTTGAGACAGAATCTCACTCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618361.4 |
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| 3UTR-3UTR CCA 90 bp | GTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGCTGTTAAATGTGCTTTaGGCCCTATCCATATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VKCALGPIHMLRLGTGQWLLNVL*ALSICS Trigger: TGAGCATATGGATAGGGCCCAAAGCACATTTAACAG...CCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000465014.6 ENST00000616803.4 ENST00000616944.4 ENST00000618061.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGAACGGGTCAGTGGGTaGGATGATTTCATTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: FSSVKCALGPIHMLRLGTERVSG*DDFILF Trigger: GAAAAGAATGAAATCATCCCACCCACTGACCCGTTC...CGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000465014.6 ENST00000616803.4 ENST00000616944.4 ENST00000618061.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGCTGTTAAATGTGCTTTaGGCCCTATCCATATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: FSSVKCALGPIHMLRLGTLLNVL*ALSICS Trigger: TGAGCATATGGATAGGGCCCAAAGCACATTTAACAG...CGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000465014.6 ENST00000616803.4 ENST00000616944.4 ENST00000618061.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR CCA 72 bp | TCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTT | + |
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Preference number: 3 (lower is better) Translates to: SLLLWALSICSD*ERVSGWDDFIL Trigger: AAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612045.4 |
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| 3UTR-3UTR CAA 90 bp | GTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGATCTGCCAAAGCAACTaGTCTAGTAGCTTCATTGAT | + |
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Preference number: 3 (lower is better) Translates to: VKCALGPIHMLRLGTGQWICQSN*SSSFID Trigger: ATCAATGAAGCTACTAGACAAGTTGCTTTGGCAGAT...CCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000616803.4 ENST00000616944.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR CCA 72 bp | TTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTT | + |
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Preference number: 3 (lower is better) Translates to: LNVLWALSICSD*ERVSGWDDFIL Trigger: AAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000465014.6 ENST00000616803.4 ENST00000616944.4 ENST00000618061.4 ENST00000618361.4 ENST00000619157.4 |
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| 3UTR-3UTR CAA 90 bp | GGACAGAGTGAGATTCTGTCTCAAACCAGAGTGAGATTCTGTCTAAGGCCTCTGATCTGCCAAAGCAACTaGTCTAGTAGCTTCATTGAT | + |
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Preference number: 3 (lower is better) Translates to: GQSEILSQTRVRFCLRPLICQSN*SSSFID Trigger: ATCAATGAAGCTACTAGACAAGTTGCTTTGGCAGAT...CAGAGGCCTTAGACAGAATCTCACTCTGGTTTGAGACAGAATCTCACTCTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618361.4 |
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| 3UTR-3UTR CAA 90 bp | TTCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGATCTGCCAAAGCAACTaGTCTAGTAGCTTCATTGAT | + |
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Preference number: 3 (lower is better) Translates to: FSSVKCALGPIHMLRLGTICQSN*SSSFID Trigger: ATCAATGAAGCTACTAGACAAGTTGCTTTGGCAGAT...CGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000616803.4 ENST00000616944.4 ENST00000618361.4 ENST00000619157.4 |
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| CDS-3UTR TCA 90 bp | GTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGAGGCAGAGGTTTCAGTaGGCCGAGGTCGCACCACCG | + |
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Preference number: 4 (lower is better) Translates to: VKCALGPIHMLRLGTGQWRQRFQ*AEVAPP Trigger: CGGTGGTGCGACCTCGGCTCACTGAAACCTCTGCCT...CCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465014.6 ENST00000618361.4 |
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| CDS-3UTR TCA 90 bp | GTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGGGTCAGTGGATGGTCTCCATCTCCTaGCCTCGTGATCCACCCACC | + |
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Preference number: 4 (lower is better) Translates to: VKCALGPIHMLRLGTGQWMVSIS*PRDPPT Trigger: GGTGGGTGGATCACGAGGTCAGGAGATGGAGACCAT...CCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618061.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGAGGCAGAGGTTTCAGTaGGCCGAGGTCGCACCACCG | + |
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Preference number: 4 (lower is better) Translates to: FSSVKCALGPIHMLRLGTRQRFQ*AEVAPP Trigger: CGGTGGTGCGACCTCGGCTCACTGAAACCTCTGCCT...CGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465014.6 ENST00000618361.4 |
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| CDS-3UTR TCA 90 bp | TTCTCTTCTGTTAAATGTGCTTTGGGCCCTATCCATATGCTCAGATTGGGAACGAGCAGGAGAATCGCCTaGACCCAGGAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FSSVKCALGPIHMLRLGTSRRIA*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCAGGCGATTCTCCTGCT...CGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCACATTTAACAGAAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465014.6 |
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| CDS-3UTR TCA 90 bp | GGACAGAGTGAGATTCTGTCTCAAACCAGAGTGAGATTCTGTCTAAGGCCTCTGGAGTCTATTAGCTGCTaGGCCTTGATCTTTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: GQSEILSQTRVRFCLRPLESISC*ALIFVF Trigger: AAACACAAAGATCAAGGCTCAGCAGCTAATAGACTC...CAGAGGCCTTAGACAGAATCTCACTCTGGTTTGAGACAGAATCTCACTCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618361.4 |
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| CDS-3UTR TCA 90 bp | AAGACAATGAGAAACAGACCAAGGATTAGAACCCAAGCAGATTCCAAGGTCTGTTCCCTAAGAAGACAATaGGAAACAGACCAAGGATTA | + |
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Preference number: 4 (lower is better) Translates to: KTMRNRPRIRTQADSKVCSLRRQ*ETDQGL Trigger: TAATCCTTGGTCTGTTTCTCATTGTCTTCTTAGGGA...ACAGACCTTGGAATCTGCTTGGGTTCTAATCCTTGGTCTGTTTCTCATTGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377447.7 |
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| CDS CCA 90 bp | TTGTCCAATTCTTTGCTGCTTTGGGCCCTATCCATATGCTCAGATTaGGAACGGGTCAGTGGGTGGGATGATTTCATTCTTTTCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LSNSLLLWALSICSD*ERVSGWDDFILFCL Trigger: AAGGCAGAAAAGAATGAAATCATCCCACCCACTGACCCGTTCCCAATCTGAGCATATGGATAGGGCCCAAAGCAGCAAAGAATTGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487575.6 ENST00000612045.4 |
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| CDS-3UTR CAA 90 bp | GATAGGCATTATGCCTTTTACAGAGGAGGCTTTAAAAGGGTAAATAAGCTCCCTATCTGCCAAAGCAACTaGTCTAGTAGCTTCATTGAT | + |
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Preference number: 5 (lower is better) Translates to: DRHYAFYRGGFKRVNKLPICQSN*SSSFID Trigger: ATCAATGAAGCTACTAGACAAGTTGCTTTGGCAGAT...AGGGAGCTTATTTACCCTTTTAAAGCCTCCTCTGTAAAAGGCATAATGCCTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377447.7 |
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| CDS TCA 72 bp | GGCCAAGGTGGGCGGATCACTTTGAGGCCAGGAGTTTaGCACCAACCGGGCCAATGTGGCGAAACCGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GQGGRITLRPGV*HQPGQCGETVS Trigger: AGAGACGGTTTCGCCACATTGGCCCGGTTGGTGTCAAACTCCTGGCCTCAAAGTGATCCGCCCACCTTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000475411.5 ENST00000611457.4 |
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| CDS CAA 90 bp | AATGAAGTGTATAAGAACCCAAAGAATGCATGCAGTACCTGTAACTaGAAAAGACTGCCTGACAATGAAATTCAATCAGGAGATGGACTA | + |
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Preference number: 6 (lower is better) Translates to: NEVYKNPKNACSTCN*KRLPDNEIQSGDGL Trigger: TAGTCCATCTCCTGATTGAATTTCATTGTCAGGCAGTCTTTTCAAGTTACAGGTACTGCATGCATTCTTTGGGTTCTTATACACTTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495302.5 |
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| CDS CAA 72 bp | TATAAGAACCCAAAGAATGCATGCAGTACCTGTAACTaGAAAAGACTGCCTGACAATGAAATTCAATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: YKNPKNACSTCN*KRLPDNEIQSG Trigger: TCCTGATTGAATTTCATTGTCAGGCAGTCTTTTCAAGTTACAGGTACTGCATGCATTCTTTGGGTTCTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495302.5 |
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| CDS TCA 72 bp | GGAACAACATTTACAAAGTTGAGGGGGAATAAAGTGTaGCTGATAAATTTTATACCTAGCCAAGTAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: GTTFTKLRGNKV*LINFIPSQVIL Trigger: AAGGATTACTTGGCTAGGTATAAAATTTATCAGTCACACTTTATTCCCCCTCAACTTTGTAAATGTTGTTCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495302.5 |
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