RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBS (Homo sapiens)

Ensembl gene IDs: ENSG00000160200

Ensembl transcript IDs: ENST00000352178.9, ENST00000359624.7, ENST00000398158.5, ENST00000398165.8, ENST00000430013.1, ENST00000458223.5, ENST00000461686.5, ENST00000470912.5, ENST00000488526.1, ENST00000491776.1

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACAGGGAAAACCTATTTTAGACAACAGAGACACAAAGTCGATCAGCAGTTGCCATCAATATTTCCTTGGTaGAACATCCGCCCAGCGCTC +
Preference number: 2 (lower is better)
Translates to: TGKTYFRQQRHKVDQQLPSIFPW*NIRPAL
Trigger: GAGCGCTGGGCGGATGTTTCACCAAGGAAATATTGA...TGGCAACTGCTGATCGACTTTGTGTCTCTGTTGTCTAAAATAGGTTTTCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359624.7
CDS-3UTR TCA 90 bp ACAGAGACACAAAGTCGATCAGCAGTTGCCAGGGGAGGAGGAAGACGGGAGGGGGTGATTCCATTTATATaGAATGTCCAGAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TETQSRSAVARGGGRREGVIPFI*NVQNRE
Trigger: TTCCCTGTTCTGGACATTTCATATAAATGGAATCAC...CCCCTCCCGTCTTCCTCCTCCCCTGGCAACTGCTGATCGACTTTGTGTCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352178.9
ENST00000359624.7
ENST00000398158.5
ENST00000398165.8
CDS-3UTR TCA 90 bp GGAAAACCTATTTTAGACAACAGAGACACAAAGTCGATCAGCAGTTGCCAGGGGTCAATATTTCCTTGGTaGAACATCCGCCCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: GKPILDNRDTKSISSCQGSIFPW*NIRPAL
Trigger: GAGCGCTGGGCGGATGTTTCACCAAGGAAATATTGA...CCCCTGGCAACTGCTGATCGACTTTGTGTCTCTGTTGTCTAAAATAGGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359624.7
CDS-3UTR TCA 90 bp GGAAAACCTATTTTAGACAACAGAGACACAAAGTCGATCAGCAGTTGCCAGGGGCTCTGTAAGGAGACGTaGCAACAGAATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: GKPILDNRDTKSISSCQGLCKET*QQNLSW
Trigger: CCATGACAGATTCTGTTGTCACGTCTCCTTACAGAG...CCCCTGGCAACTGCTGATCGACTTTGTGTCTCTGTTGTCTAAAATAGGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352178.9
ENST00000359624.7
ENST00000398165.8
CDS-3UTR TCA 90 bp ACAGGGAAAACCTATTTTAGACAACAGAGACACAAAGTCGATCAGCAGTTGCCACTCTGTAAGGAGACGTaGCAACAGAATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: TGKTYFRQQRHKVDQQLPLCKET*QQNLSW
Trigger: CCATGACAGATTCTGTTGTCACGTCTCCTTACAGAG...TGGCAACTGCTGATCGACTTTGTGTCTCTGTTGTCTAAAATAGGTTTTCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352178.9
ENST00000359624.7
ENST00000398165.8
CDS-3UTR TCA 90 bp GAAATGTCCAGAACAGGGAAAACCTATTTTAGACAACAGAGACACAAAGTCGATCTCTGTAAGGAGACGTaGCAACAGAATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: EMSRTGKTYFRQQRHKVDLCKET*QQNLSW
Trigger: CCATGACAGATTCTGTTGTCACGTCTCCTTACAGAG...ATCGACTTTGTGTCTCTGTTGTCTAAAATAGGTTTTCCCTGTTCTGGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352178.9
ENST00000359624.7
ENST00000398165.8
CDS-3UTR TCA 90 bp AAATGTCCAGAACAGGGAAAACCTATTTTAGACAACAGAGACACAAAGTCGATCGTGATTCCATTTATATaGAATGTCCAGAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: KCPEQGKPILDNRDTKSIVIPFI*NVQNRE
Trigger: TTCCCTGTTCTGGACATTTCATATAAATGGAATCAC...GATCGACTTTGTGTCTCTGTTGTCTAAAATAGGTTTTCCCTGTTCTGGACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352178.9
ENST00000359624.7
ENST00000398158.5
ENST00000398165.8
CDS TCA 90 bp TGCAAAGAAATGCCCTTCCCCGGAGGCCTCAGACCACACCTCAGGTaGCCCCCTGCGCACCCAGGACGAGGCCAGCCACAGACCCTCCAA +
Preference number: 5 (lower is better)
Translates to: CKEMPFPGGLRPHLR*PPAHPGRGQPQTLQ
Trigger: TTGGAGGGTCTGTGGCTGGCCTCGTCCTGGGTGCGCAGGGGGTCACCTGAGGTGTGGTCTGAGGCCTCCGGGGAAGGGCATTTCTTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461686.5
CDS CCA 90 bp CACAGATCTCGTTCCCTCTCTCTCCCCGCTCCCCACACATCCTCTTaGTCCTGCGTCTCCACAGGACCCTACACCAGCTGTCATGAGGCA +
Preference number: 5 (lower is better)
Translates to: HRSRSLSLPAPHTSS*SCVSTGPYTSCHEA
Trigger: TGCCTCATGACAGCTGGTGTAGGGTCCTGTGGAGACGCAGGACCAAGAGGATGTGTGGGGAGCGGGGAGAGAGAGGGAACGAGATCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491776.1
CDS TCA 90 bp TTCTCTGTGACGATGCTGAGGTCTACCAGGGCTCTGCGCTCTTGGTaGAGAGCGACCCTTAGGAATTCCCTCCACGTTCTTGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: FSVTMLRSTRALRSW*RATLRNSLHVLEPG
Trigger: TCCAGGCTCAAGAACGTGGAGGGAATTCCTAAGGGTCGCTCTTCACCAAGAGCGCAGAGCCCTGGTAGACCTCAGCATCGTCACAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461686.5
ENST00000470912.5
CDS TCA 90 bp GTGACAACAGAATCTGTCATGGGATCCTGGAATAGAAAAGGGCAGTaGGGAGAAAACTCTGCAAATCTGACTCAAGCGCGGACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: VTTESVMGSWNRKGQ*GENSANLTQARTLV
Trigger: AACCAAAGTCCGCGCTTGAGTCAGATTTGCAGAGTTTTCTCCTCACTGCCCTTTTCTATTCCAGGATCCCATGACAGATTCTGTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488526.1
CDS TCA 72 bp ATGCCCTTCCCCGGAGGCCTCAGACCACACCTCAGGTaGCCCCCTGCGCACCCAGGACGAGGCCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: MPFPGGLRPHLR*PPAHPGRGQPQ
Trigger: CTGTGGCTGGCCTCGTCCTGGGTGCGCAGGGGGTCACCTGAGGTGTGGTCTGAGGCCTCCGGGGAAGGGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461686.5
CDS CAA 72 bp TCGTTCCCTCTCTCTCCCCGCTCCCCACACATCCTCTaGGTCCTGCGTCTCCACAGGACCCTACACCAGCTG +
Preference number: 6 (lower is better)
Translates to: SFPLSPRSPHIL*VLRLHRTLHQL
Trigger: CAGCTGGTGTAGGGTCCTGTGGAGACGCAGGACCAAGAGGATGTGTGGGGAGCGGGGAGAGAGAGGGAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491776.1
CDS GCA 72 bp AGGGCCAGCTGGTGGTATTTTAGGTCTTGGGGGCCGTaGCGTCTCTGTTATGAGCACGCAGCCCTGACGTGC +
Preference number: 6 (lower is better)
Translates to: RASWWYFRSWGP*RLCYEHAALTC
Trigger: GCACGTCAGGGCTGCGTGCTCATAACAGAGACGGCACGGCCCCCAAGACCTAAAATACCACCAGCTGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430013.1
ENST00000458223.5
ENST00000491776.1
CDS GCA 72 bp ATTCCCTCCACGTTCTTGAGCCTGGAAACTGCGTCCTaGAAAGAAATGCCCTTCCCCGGAGGCCTCAGACCA +
Preference number: 6 (lower is better)
Translates to: IPSTFLSLETAS*KEMPFPGGLRP
Trigger: TGGTCTGAGGCCTCCGGGGAAGGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAACGTGGAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461686.5
CDS TCA 72 bp ACGATGCTGAGGTCTACCAGGGCTCTGCGCTCTTGGTaGAGAGCGACCCTTAGGAATTCCCTCCACGTTCTT +
Preference number: 6 (lower is better)
Translates to: TMLRSTRALRSW*RATLRNSLHVL
Trigger: AAGAACGTGGAGGGAATTCCTAAGGGTCGCTCTTCACCAAGAGCGCAGAGCCCTGGTAGACCTCAGCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461686.5
ENST00000470912.5
CDS GCA 72 bp ATTCCCTCCACGTTCTTGAGCCTGGAAACTGCGTCCTaGAAAGAAATGCCAGAGCTCACACTTCAGGCCGAA +
Preference number: 6 (lower is better)
Translates to: IPSTFLSLETAS*KEMPELTLQAE
Trigger: TTCGGCCTGAAGTGTGAGCTCTGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAACGTGGAGGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470912.5
CDS GCA 72 bp CTTAGGAATTCCCTCCACGTTCTTGAGCCTGGAAACTaGGTCCTGCAAAGAAATGCCAGAGCTCACACTTCA +
Preference number: 6 (lower is better)
Translates to: LRNSLHVLEPGN*VLQRNARAHTS
Trigger: TGAAGTGTGAGCTCTGGCATTTCTTTGCAGGACGCAGTTTCCAGGCTCAAGAACGTGGAGGGAATTCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470912.5