Pregenerated sensors for CBR3 (Homo sapiens)
Ensembl gene IDs: ENSG00000159231Ensembl transcript IDs: ENST00000290354.6
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | AGCGCGGGGCACCTGCGTGGAGGGCGGACCGGGCTTCGGACCACCTaGGGCGCGCCCCGAGGAGCCCAGCTAGTGTCAATGCCGCCGCGC | + |
Preference number: 5 (lower is better) Translates to: SAGHLRGGRTGLRTT*GAPRGAQLVSMPPR Trigger: GCGCGGCGGCATTGACACTAGCTGGGCTCCTCGGGGCGCGCCCCAGGTGGTCCGAAGCCCGGTCCGCCCTCCACGCAGGTGCCCCGCGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS TCA 90 bp | TCCTCTTCTCATCCAGACGCCTGGCCAGGATCCTCGATAAGACCGTaGCCCCCAACTTGGACACCCCATAAGGTGAGTTGGGCCAGCCTT | + |
Preference number: 5 (lower is better) Translates to: SSSHPDAWPGSSIRP*PPTWTPHKVSWASL Trigger: AAGGCTGGCCCAACTCACCTTATGGGGTGTCCAAGTTGGGGGTCACGGTCTTATCGAGGATCCTGGCCAGGCGTCTGGATGAGAAGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS CCA 72 bp | CACCTGCGTGGAGGGCGGACCGGGCTTCGGACCACCTaGGGCGCGCCCCGAGGAGCCCAGCTAGTGTCAATG | + |
Preference number: 6 (lower is better) Translates to: HLRGGRTGLRTT*GAPRGAQLVSM Trigger: CATTGACACTAGCTGGGCTCCTCGGGGCGCGCCCCAGGTGGTCCGAAGCCCGGTCCGCCCTCCACGCAGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS TCA 72 bp | CATCCAGACGCCTGGCCAGGATCCTCGATAAGACCGTaGCCCCCAACTTGGACACCCCATAAGGTGAGTTGG | + |
Preference number: 6 (lower is better) Translates to: HPDAWPGSSIRP*PPTWTPHKVSW Trigger: CCAACTCACCTTATGGGGTGTCCAAGTTGGGGGTCACGGTCTTATCGAGGATCCTGGCCAGGCGTCTGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS CCA 72 bp | GTTTACCAGTTTTGCACAACTTTGTCATGGACCAACTaGCCTTGTGGCTCAGTGGCATCTGGAGGCAAGAGG | + |
Preference number: 6 (lower is better) Translates to: VYQFCTTLSWTN*PCGSVASGGKR Trigger: CCTCTTGCCTCCAGATGCCACTGAGCCACAAGGCCAGTTGGTCCATGACAAAGTTGTGCAAAACTGGTAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS CAA 72 bp | AGCTCCGAAGCAGACGTTTACCAGTTTTGCACAACTTaGTCATGGACCAACTGGCCTTGTGGCTCAGTGGCA | + |
Preference number: 6 (lower is better) Translates to: SSEADVYQFCTT*SWTNWPCGSVA Trigger: TGCCACTGAGCCACAAGGCCAGTTGGTCCATGACAAAGTTGTGCAAAACTGGTAAACGTCTGCTTCGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS CCA 72 bp | AGATCCACCAGGTCTCCTTCTGTGAGTGTCTCACTGTaGAACCTTTCCTGCAGATCTTCACTGCAGTTTTCA | + |
Preference number: 6 (lower is better) Translates to: RSTRSPSVSVSL*NLSCRSSLQFS Trigger: TGAAAACTGCAGTGAAGATCTGCAGGAAAGGTTCCACAGTGAGACACTCACAGAAGGAGACCTGGTGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS CAA 90 bp | CAACATTTATTAAGCAGCAAGCTCCGAAGCAGACGTTTACCAGTTTaGCACAACTTTGTCATGGACCAACTGGCCTTGTGGCTCAGTGGC | + |
Preference number: 6 (lower is better) Translates to: QHLLSSKLRSRRLPV*HNFVMDQLALWLSG Trigger: GCCACTGAGCCACAAGGCCAGTTGGTCCATGACAAAGTTGTGCAAAACTGGTAAACGTCTGCTTCGGAGCTTGCTGCTTAATAAATGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000290354.6 |
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CDS GCA 72 bp | GTGTCTCACTGTGGAACCTTTCCTGCAGATCTTCACTaGAGTTTTCAAAAGCCCTTAAACACTGCAAACTAC | + |
Preference number: 6 (lower is better) Translates to: VSHCGTFPADLH*SFQKPLNTANY Trigger: GTAGTTTGCAGTGTTTAAGGGCTTTTGAAAACTGCAGTGAAGATCTGCAGGAAAGGTTCCACAGTGAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290354.6 |