RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBLB (Homo sapiens)

Ensembl gene IDs: ENSG00000114423

Ensembl transcript IDs: ENST00000394030.8, ENST00000403724.5, ENST00000405772.5, ENST00000407712.1, ENST00000438603.6, ENST00000443752.2, ENST00000447441.6, ENST00000476370.1, ENST00000642241.1, ENST00000642907.1, ENST00000643192.1, ENST00000643322.1, ENST00000643403.1, ENST00000645425.1, ENST00000645759.1, ENST00000646499.1, ENST00000646825.1

Found 1247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATCCAGGCGAGGAGGCACGGGTGGCAGGCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGCTTTCTTCTCTGGGCAAGGGGAGAG +
Preference number: 1 (lower is better)
Translates to: RSRRGGTGGRLRCGI*SGSGCGFLLWARGE
Trigger: CTCTCCCCTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTCCAGATCCCACATCTAAGCCTGCCACCCGTGCCTCCTCGCCTGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR TCA 90 bp GCTGTGGCTTTCTTCTCTGGGCAAGGGGAGAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGTCAGTGCACTTTCGGACGTTTGCCA +
Preference number: 1 (lower is better)
Translates to: AVAFFSGQGERILVM*LVSSACQCTFGRLP
Trigger: TGGCAAACGTCCGAAAGTGCACTGACAGGCAGAACTCACCAGTCACATCACCAGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR TCA 90 bp GGTGAACCCGTTGGGCTGCCACAGGGAGATCTAACTATGCCTTTCTaGATTAGATCCAGGCGAGGAGGCACGGGTGGCAGGCTTAGATGT +
Preference number: 1 (lower is better)
Translates to: GEPVGLPQGDLTMPF*IRSRRGGTGGRLRC
Trigger: ACATCTAAGCCTGCCACCCGTGCCTCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAGATCTCCCTGTGGCAGCCCAACGGGTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 90 bp CTTAGATGTGGGATCTGGAGTGGGTCAGGCTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCTGGTGATGTGACTGGTGAGTTCTGC +
Preference number: 1 (lower is better)
Translates to: LRCGIWSGSGCGFLL*ARGEDPGDVTGEFC
Trigger: GCAGAACTCACCAGTCACATCACCAGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTCCAGATCCCACATCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 90 bp AGGCACGCTTTCCACATGATGGATGTGTCTACTCAGTCTATTGTCTaGTGGGATTGGTGGAGGTCTTTCAGGTGGCGGTGGAGGAGGATC +
Preference number: 1 (lower is better)
Translates to: RHAFHMMDVSTQSIV*WDWWRSFRWRWRRI
Trigger: GATCCTCCTCCACCGCCACCTGAAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGGAAAGCGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 90 bp ACACATCCCGAGGGCACCATGCTTCAAGAGGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACATGATGGATGTGTCTACTCAGTCTAT +
Preference number: 1 (lower is better)
Translates to: THPEGTMLQEALAGL*KARFPHDGCVYSVY
Trigger: ATAGACTGAGTAGACACATCCATCATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR TCA 90 bp CATCATCGTCGTCCAAGTCTAGCATCGGCATGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGCCTTCATCTCTTGGATCAAAGGGGT +
Preference number: 1 (lower is better)
Translates to: HHRRPSLASACQRGQ*CCNTWSLHLLDQRG
Trigger: ACCCCTTTGATCCAAGAGATGAAGGCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCATGCCGATGCTAGACTTGGACGACGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR TCA 90 bp GCTTCAAGAGGCATTGGCGGGTCTCTGGAAGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGA +
Preference number: 1 (lower is better)
Translates to: ASRGIGGSLEGTLST*WMCLLSLLSGGIGG
Trigger: TCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR GCA 90 bp TTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATaGTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTAAGGCTC +
Preference number: 1 (lower is better)
Translates to: LDVGILEEGRQILGG*SGQLRHYSGLSLRL
Trigger: GAGCCTTAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CCA 90 bp CACGCTTTCCACATGATGGATGTGTCTACTCAGTCTATTGTCTGGTaGGATTGGTGGAGGTCTTTCAGGTGGCGGTGGAGGAGGATCTCT +
Preference number: 1 (lower is better)
Translates to: HAFHMMDVSTQSIVW*DWWRSFRWRWRRIS
Trigger: AGAGATCCTCCTCCACCGCCACCTGAAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGGAAAGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR GCA 90 bp CGTCTGTGTTTCCGCATAAGCACTGGGTCAGAGCCCACTCTACTGTaGCTTCCATTGACATTTGAACTCGCTGTGATTCCAGGTTTTGGA +
Preference number: 1 (lower is better)
Translates to: RLCFRISTGSEPTLL*LPLTFELAVIPGFG
Trigger: TCCAAAACCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTATGCGGAAACACAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 90 bp TCTACATGGAGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTaGAGAACCCATTCAAATTTCAGGCAAATTCACAACCCAGTGAGT +
Preference number: 1 (lower is better)
Translates to: STWSNGLVNLGVTGT*RTHSNFRQIHNPVS
Trigger: ACTCACTGGGTTGTGAATTTGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACTCCATGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
3UTR CCA 90 bp TTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTaGCCACTTGCTAGATCAACAAAGGGATCTTGGCAGTCAGAGACG +
Preference number: 1 (lower is better)
Translates to: LTFSPGNLLAGGKGT*PLARSTKGSWQSET
Trigger: CGTCTCTGACTGCCAAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643322.1
ENST00000646499.1
3UTR CCA 90 bp TTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTaGCCACTTGCTAGATCAACAAAGGGATCACCTTGGCAGTCAGAG +
Preference number: 1 (lower is better)
Translates to: LTFSPGNLLAGGKGT*PLARSTKGSPWQSE
Trigger: CTCTGACTGCCAAGGTGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR TCA 90 bp TTTAGAGCCATTGCTTCCAGGCCAGAGCTAATCTGGTGGACCTCATaGAGGCACTGTCTGAATACTTTCCATGGTACGATAGTTTTGTCT +
Preference number: 1 (lower is better)
Translates to: FRAIASRPELIWWTS*RHCLNTFHGTIVLS
Trigger: AGACAAAACTATCGTACCATGGAAAGTATTCAGACAGTGCCTTCATGAGGTCCACCAGATTAGCTCTGGCCTGGAAGCAATGGCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR TCA 90 bp TTTCCACCAGATCTACTAGATGTTCAGTCATGTCCTTTCAGGTCCTaGAGGCAGGCTCACTCTCTGATGCATCTTTTTATATCATGGTGG +
Preference number: 1 (lower is better)
Translates to: FPPDLLDVQSCPFRS*RQAHSLMHLFISWW
Trigger: CCACCATGATATAAAAAGATGCATCAGAGAGTGAGCCTGCCTTCAGGACCTGAAAGGACATGACTGAACATCTAGTAGATCTGGTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR TCA 90 bp CTACTACACTACTACCTTAATCATCTACATGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCA +
Preference number: 1 (lower is better)
Translates to: LLHYYLNHLHGVMVS*TWESPAPGEPIQIS
Trigger: TGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACTCCATGTAGATGATTAAGGTAGTAGTGTAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR TCA 90 bp CAAAAGCATCTTCACCTTAATCATCTACATGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCA +
Preference number: 1 (lower is better)
Translates to: QKHLHLNHLHGVMVS*TWESPAPGEPIQIS
Trigger: TGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACTCCATGTAGATGATTAAGGTGAAGATGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR GCA 90 bp TGGAATACATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTaGTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAAT +
Preference number: 1 (lower is better)
Translates to: WNTSIAFHFGVYSSG*YRFRRGDTGGGKAN
Trigger: ATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATGTATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CCA 90 bp TTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTaGCCACTTGCTAGATCAACAAAGGGATCTGAAGGAAGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: LTFSPGNLLAGGKGT*PLARSTKGSEGRRK
Trigger: TTTTCTTCTTCCTTCAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR TCA 90 bp TCCCAAACACATCCCGAGGGCACCATGCTTCAAGAGGCATTGGCGGGTCTCTGGCAGAAAGGGCAGCCCTaGCCATCCGACTCCTTGCTA +
Preference number: 2 (lower is better)
Translates to: SQTHPEGTMLQEALAGLWQKGQP*PSDSLL
Trigger: TAGCAAGGAGTCGGATGGTCAGGGCTGCCCTTTCTG...CCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGATGTGTTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR CCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 2 (lower is better)
Translates to: FEKLHSQASSQAATRGGDPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp GAGGGCACCATGCTTCAAGAGGCATTGGCGGGTCTCTGGAAGGCACGCTTTCCAATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: EGTMLQEALAGLWKARFPMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...TGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCA +
Preference number: 2 (lower is better)
Translates to: FEKLHSQASSQAATRGGDGVMVS*TWESPA
Trigger: TGCCGGTGACTCCCAAGTTCACGAGACCATTACTCC...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR-3UTR TCA 90 bp CGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTATCTGGTGGACCTCATaGAGGCACTGTCTGAATACT +
Preference number: 2 (lower is better)
Translates to: RGDTGGGKANSRRMLRATIWWTS*RHCLNT
Trigger: AGTATTCAGACAGTGCCTTCATGAGGTCCACCAGAT...AGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR GCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 2 (lower is better)
Translates to: SKNKEATAVDILSKHRSPVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAAGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 2 (lower is better)
Translates to: RGRGLGGLAGACEPSEHEGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAACAGAGACGGGGCATCTaGAGGAAGAAGAAAAAGATC +
Preference number: 2 (lower is better)
Translates to: RGRGLGGLAGACEPSEHEQRRGI*RKKKKI
Trigger: GATCTTTTTCTTCTTCCTTCAGATGCCCCGTCTCTG...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642241.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: FEKLHSQASSQAATRGGDSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCGGAGTCACCGGCACCTaGAGAACCCATTCAAATTTC +
Preference number: 2 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPGVTGT*RTHSNF
Trigger: GAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCC...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR CAA 90 bp TTCCGCATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATaGACATTTGAACTCGCTGTGATTCCAGGTTTTGGAGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: FRISTGSEPTLLCLP*TFELAVIPGFGEPS
Trigger: GGAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTATGCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp AGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: RQILGGCSGQLRHYSGLSQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...AGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp CCACATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGAGGTCTGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: PHDGCVYSVYCLVGLVEVCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...GACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: RREGKFSEDAPGNFDIILSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: SKNKEATAVDILSKHRSPSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: RREGKFSEDAPGNFDIILMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAGATTTTTACAGTTGTaGCACCCCTGGGATGACAGA +
Preference number: 2 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPRFLQL*HPWDDR
Trigger: TCTGTCATCCCAGGGGTGTCACAACTGTAAAAATCT...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGTGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LVSTVLAAIDLDVGILEECQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 2 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAATGGAACTGGACCTaGGCAAGGCATGGGGATGGT +
Preference number: 2 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIKWNWT*ARHGDG
Trigger: ACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTT...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CAA 90 bp TTTCCACATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATaGGTGGAGGTCTTTCAGGTGGCGGTGGAGGAGGATCTCTTAAGG +
Preference number: 2 (lower is better)
Translates to: FPHDGCVYSVYCLVG*VEVFQVAVEEDLLR
Trigger: CCTTAAGAGATCCTCCTCCACCGCCACCTGAAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp GACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAAACACAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: DLTTLQRVCEEHSTGIKTQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...TGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp CGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 2 (lower is better)
Translates to: RGDTGGGKANSRRMLRATLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...AGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp TCCCAAACACATCCCGAGGGCACCATGCTTCAAGAGGCATTGGCGGGTCTCTGGTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 2 (lower is better)
Translates to: SQTHPEGTMLQEALAGLWLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...CCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGATGTGTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: AAIDLDVGILEEGRQILGMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 2 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 2 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTATTACCCAAGGCCTGTaGGTCCTCATCTCATACCAT +
Preference number: 2 (lower is better)
Translates to: SKNKEATAVDILSKHRSPITQGL*VLISYH
Trigger: ATGGTATGAGATGAGGACTCACAGGCCTTGGGTAAT...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTCACGGGATCAGAGGCTaGATCAAAAACATCTCCCTT +
Preference number: 2 (lower is better)
Translates to: SKNKEATAVDILSKHRSPHGIRG*IKNISL
Trigger: AAGGGAGATGTTTTTGATTCAGCCTCTGATCCCGTG...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR GCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGATCATATGTGAGAAATaGCATGTAACCTGGATGTGT +
Preference number: 2 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSIICEK*HVTWMC
Trigger: ACACATCCAGGTTACATGGCATTTCTCACATATGAT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp GCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATTGGAAAAGACCTAACTTCTGGCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 2 (lower is better)
Translates to: AGEEHHILHFQGDHWKRPNFWLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGCCAGAAGTT...AGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR CCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 2 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp GAGAAAGCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATTGGAAAGAGTGGGTCAGGCTGTaGCTTTCTTCTCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: EKAGEEHHILHFQGDHWKEWVRL*LSSLGK
Trigger: CTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTC...TTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTATCAACAAAGGGATCTTaGCAGTCAGAGACGGGGCAT +
Preference number: 2 (lower is better)
Translates to: MWTARELVGNVTADLTTLSTKGS*QSETGH
Trigger: ATGCCCCGTCTCTGACTGCCAAGATCCCTTTGTTGA...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643322.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: SILVSTVLAAIDLDVGILSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: LVSTVLAAIDLDVGILEEMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCCTCTATGTTATGTaGAAACCCCTTACAAAAGGC +
Preference number: 2 (lower is better)
Translates to: KLHSQASSQAATRGGDTSLLYVM*KPLTKG
Trigger: GCCTTTTGTAAGGGGTTTTCACATAACATAGAGGAG...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCATGAAGGCACTGTCTaGATACTTTCCATGGTACGA +
Preference number: 2 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLHEGTV*ILSMVR
Trigger: TCGTACCATGGAAAGTATTCAGACAGTGCCTTCATG...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR TCA 90 bp ACCATGTGTTCCATTCAGCATACAGTGACCATTATCACAAGACCGAACAGGAGGAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: TMCSIQHTVTIITRPNRRRILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...CCTCCTGTTCGGTCTTGTGATAATGGTCACTGTATGCTGAATGGAACACATGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp AGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGTGGTTATTTCCACACTCTTaGAATACATCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: RPMGFSVVNFWCSPARSWLFPHS*NTSIAF
Trigger: GAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAA...CCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 2 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACCCAAGGTTCCTAGAATaGGCAGTTAGGTTTAATGTA +
Preference number: 2 (lower is better)
Translates to: FEKLHSQASSQAATRGGDPRFLE*AVRFNV
Trigger: TACATTAAACCTAACTGCTCATTCTAGGAACCTTGG...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR GCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCTTGGAATACATCGATTaGTTTCCATTTTGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCLEYID*FPFWCL
Trigger: TAGACACCAAAATGGAAAGCAATCGATGTATTCCAA...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAATTGGAATACATCGATTaGTTTCCATTTTGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: RGRGLGGLAGACEPSEHELEYID*FPFWCL
Trigger: TAGACACCAAAATGGAAAGCAATCGATGTATTCCAA...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAGTCTACAGTTCTGGCTaGTATAGATTTAGACGTGGG +
Preference number: 2 (lower is better)
Translates to: MWTARELVGNVTADLTTLVYSSG*YRFRRG
Trigger: CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGAC...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp ATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTGAACTCCAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 2 (lower is better)
Translates to: ISTGSEPTLLCLPLTFELQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...GAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATCAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 2 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTCACTGCAATATGAACTaGTTCCCACAGCTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGHCNMN*FPQLLG
Trigger: TCCTAAGAGCTGTGGGAACCAGTTCATATTGCAGTG...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAGGCAGGCTCACTCTCTaGTGCATCTTTTTATATCAT +
Preference number: 2 (lower is better)
Translates to: MWTARELVGNVTADLTTLGRLTL*CIFLYH
Trigger: ATGATATAAAAAGATGCATCAGAGAGTGAGCCTGCC...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp TGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGAAATTCACAACCCAGTaGGTCTGTGTTATACTGAAC +
Preference number: 2 (lower is better)
Translates to: WSRELGSHRHLENPFKFQKFTTQ*VCVILN
Trigger: GTTCAGTATAACACAGACTCACTGGGTTGTGAATTT...CTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
3UTR-3UTR TCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTAAAATTCACAACCCAGTaGGTCTGTGTTATACTGAAC +
Preference number: 2 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLKFTTQ*VCVILN
Trigger: GTTCAGTATAACACAGACTCACTGGGTTGTGAATTT...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR-3UTR TCA 90 bp TTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 2 (lower is better)
Translates to: FHFGVYSSGCYRFRRGDTQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...AGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 2 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp ATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: IAFHFGVYSSGCYRFRRGSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: CRHPEQASVSFEKLHSQANKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGAATTCAGCAGCATCTaGTTTTGTGATACGAAAGTT +
Preference number: 2 (lower is better)
Translates to: GGKANSRRMLRATSTLFWEFSSI*FCDTKV
Trigger: AACTTTCGTATCACAAAAGCAGATGCTGCTGAATTC...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR CCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTTTATTTCCACACTCTTaGAATACATCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPLFPHS*NTSIAF
Trigger: GAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAA...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTTATTTCCACACTCTTaGAATACATCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFLFPHS*NTSIAF
Trigger: GAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAA...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp GACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAAACACAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 2 (lower is better)
Translates to: DLTTLQRVCEEHSTGIKTQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...TGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp ATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTGAACTCAGGTGGTGCTGGGAGTaGTTTATCTTGTTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: ISTGSEPTLLCLPLTFELRWCWE*FILFSH
Trigger: GTGAGAAAACAAGATAAACCACTCCCAGCACCACCT...GAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp CCTCAAAGTAATGCAGGCATAAGTATCAGGGGACCTTGTTATATAACTTCAGTACAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: PQSNAGISIRGPCYITSVQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...TACTGAAGTTATATAACAAGGTCCCCTGATACTTATGCCTGCATTACTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACATTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 2 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp ATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTGAACTCAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 2 (lower is better)
Translates to: ISTGSEPTLLCLPLTFELKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...GAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGAATAAGGGCTTGTTATaGGGTATGGTCTGTAAGATA +
Preference number: 2 (lower is better)
Translates to: RREGKFSEDAPGNFDIILNKGLL*GMVCKI
Trigger: TATCTTACAGACCATACCTCATAACAAGCCCTTATT...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTCATAACCCTCTCCCATaGGTTTTGCAATTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGHNPLP*VLQFLH
Trigger: ATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATG...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: KLHSQASSQAATRGGDTSNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTGGCCAAAATAAACAGTaGTATTCCAAGGTGACATCT +
Preference number: 2 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGGQNKQ*YSKVTS
Trigger: AGATGTCACCTTGGAATAGCACTGTTTATTTTGGCC...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR GCA 90 bp ATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTGAACTCCTTGTTTTCTCACCATaGAAGGAGAAGACTTTGGTG +
Preference number: 2 (lower is better)
Translates to: ISTGSEPTLLCLPLTFELLVFSP*KEKTLV
Trigger: CACCAAAGTCTTCTCCTTGCATGGTGAGAAAACAAG...GAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGTCTGAATACTTTCCATaGTACGATAGTTTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: RREGKFSEDAPGNFDIILSEYFP*YDSFVS
Trigger: GGAGACAAAACTATCGTACCATGGAAAGTATTCAGA...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR TCA 90 bp TTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAGTAGTGAAGAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: FFPSLNSDGFQRRNSVVKSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...CTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp TCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: SIAFHFGVYSSGCYRFRRMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...ACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGATTTTACTCTCTTCCTTaGCAAGGTGAAGAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGFYSLP*QGEEAK
Trigger: CTTTGCTTCTTCACCTTGTCAAGGAAGAGAGTAAAA...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR GCA 90 bp ACATTTGAACTCGCTGTGATTCCAGGTTTTGGAGAGCCCTCCCCTAGGAGTCGAAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: TFELAVIPGFGEPSPRSRNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...TCGACTCCTAGGGGAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAAAGATGCAGAGATTTTaGTGGAGGCTGGTAAATTTT +
Preference number: 2 (lower is better)
Translates to: MWTARELVGNVTADLTTLKMQRF*WRLVNF
Trigger: AAAATTTACCAGCCTCCAGCAAAATCTCTGCATCTT...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR GCA 90 bp ATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTGAACTCACTGTCCCAATCGAGTaGAACTTAACCGGAAAATAT +
Preference number: 2 (lower is better)
Translates to: ISTGSEPTLLCLPLTFELTVPIE*NLTGKY
Trigger: ATATTTTCCGGTTAAGTTGCACTCGATTGGGACAGT...GAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAGACCATCCGACTCCTTaGTATATTTCATGTAGCTAT +
Preference number: 2 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGDHPTP*YISCSY
Trigger: ATAGCTACATGAAATATAGCAAGGAGTCGGATGGTC...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR CCA 90 bp GTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCAGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: VLTFSPGNLLAGGKGTWPDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...TGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp TATACATTCAGGTTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: YTFRFFPSLNSDGFQRRNQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...GTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAATGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 2 (lower is better)
Translates to: LVSTVLAAIDLDVGILEELSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGAATGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCA +
Preference number: 2 (lower is better)
Translates to: KWNWCSCCKKSKFIFIKNGVMVS*TWESPA
Trigger: TGCCGGTGACTCCCAAGTTCACGAGACCATTACTCC...ATTCTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR GCA 90 bp CCACATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGAGGTCAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: PHDGCVYSVYCLVGLVEVNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...GACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATTATTTCCACACTCTTaGAATACATCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: AAIDLDVGILEEGRQILGLFPHS*NTSIAF
Trigger: GAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAA...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp AGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAGGAGTCACCGGCACCTaGAGAACCCATTCAAATTTC +
Preference number: 2 (lower is better)
Translates to: SVSGTGAHAARKASSYLLGVTGT*RTHSNF
Trigger: GAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCC...TAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR CCA 90 bp TTAATTAGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATGGAGTCACCGGCACCTaGAGAACCCATTCAAATTTC +
Preference number: 2 (lower is better)
Translates to: LISVSGTGAHAARKASSYGVTGT*RTHSNF
Trigger: GAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCC...ATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCTAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR CCA 90 bp CCAACCGATTCATCATCAAGGACTCCTCACGATCATCATCGTCGTCCAAGTCTAGCACTGAGAATAGGTTaGATCCATACCAAGAATTTT +
Preference number: 2 (lower is better)
Translates to: PTDSSSRTPHDHHRRPSLALRIG*IHTKNF
Trigger: AAAATTCTTGGTATGGATCCAACCTATTCTCAGTGC...TAGACTTGGACGACGATGATGATCGTGAGGAGTCCTTGATGATGAATCGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR TCA 90 bp TTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAGTAGTGAAGGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 2 (lower is better)
Translates to: FFPSLNSDGFQRRNSVVKGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...CTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR TCA 90 bp AGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGAATTCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 2 (lower is better)
Translates to: SGTGAHAARKASSYLLRIQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...AATTCTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403724.5
3UTR-3UTR TCA 90 bp CTGGAGAACCCATTCAAATTTCAGGCAAATTCACAACCCAGTGAGTCTGTGTTAAACCTAATGGAGGGATaGGAAGATCATAATCAGAGG +
Preference number: 2 (lower is better)
Translates to: LENPFKFQANSQPSESVLNLMEG*EDHNQR
Trigger: CCTCTGATTATGATCTTCTCATCCCTCCATTAGGTT...TAACACAGACTCACTGGGTTGTGAATTTGCCTGAAATTTGAATGGGTTCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403724.5
3UTR-3UTR TCA 90 bp CTTGTTTTCTCTGAAAGAGAATTTGCTAACGGACCAGTACACTTTATGCTAGGGCTAACTATGCCTTTCTaGATTAGATCCAGGCGAGGA +
Preference number: 2 (lower is better)
Translates to: LVFSEREFANGPVHFMLGLTMPF*IRSRRG
Trigger: TCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAG...CCCTAGCATAAAGTGTACTGGTCCGTTAGCAAATTCTCTTTCAGAGAAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGATTGGAATACATCGATTaGTTTCCATTTTGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGLEYID*FPFWCL
Trigger: TAGACACCAAAATGGAAAGCAATCGATGTATTCCAA...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp GCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATTGGAAAAGACCTTTGGAATACATCGATTaGTTTCCATTTTGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: AGEEHHILHFQGDHWKRPLEYID*FPFWCL
Trigger: TAGACACCAAAATGGAAAGCAATCGATGTATTCCAA...AGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR GCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 2 (lower is better)
Translates to: LVSTVLAAIDLDVGILEENKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR GCA 90 bp AGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTACGTAAGTGGAACTGGTaGTCATGCTGCAAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: SVSGTGAHAARKASSYLLRKWNW*SCCKKS
Trigger: GCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACG...TAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR CCA 90 bp TTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAGTAGTGAAGATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: FFPSLNSDGFQRRNSVVKIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...CTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 2 (lower is better)
Translates to: SILVSTVLAAIDLDVGILLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AACAATGTTATCACAATGAAGTGGCAACTTTTGGCCTTTAGACTGTACCTATCACCTTCCATTGACATTTaGACTCGCTGTGATTCCAGG +
Preference number: 2 (lower is better)
Translates to: NNVITMKWQLLAFRLYLSPSIDI*TRCDSR
Trigger: CCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGG...TGATAGGTACAGTCTAAAGGCCAAAAGTTGCCACTTCATTGTGATAACATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR TCA 90 bp TGTTTCAAGAAGAAGCGGAGCATTAAAGTTCAGAAAATTTGCAGCCTGACAATGGAAAAACACATTCTCTaGGAAGAACCTCAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: CFKKKRSIKVQKICSLTMEKHIL*EEPQAG
Trigger: GCCAGCTTGAGGTTCTTCTCAGAGAATGTGTTTTTC...CATTGTCAGGCTGCAAATTTTCTGAACTTTAATGCTCCGCTTCTTCTTGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643403.1
3UTR-3UTR GCA 90 bp AGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTATGGAACTGGTGCTCATaGTGCAAGAAAAGCAAGTTC +
Preference number: 2 (lower is better)
Translates to: SVSGTGAHAARKASSYLLWNWCS*CKKSKF
Trigger: GAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCA...TAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR GCA 90 bp CGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGTGGAACTGGTGCTCATaGTGCAAGAAAAGCAAGTTC +
Preference number: 2 (lower is better)
Translates to: RKWNWCSCCKKSKFIFIKWNWCS*CKKSKF
Trigger: GAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCA...CTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR GCA 90 bp TTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAGTAGTGAAGGAGGTGCACATCAAATaGCCACAAGGCTCAATCTTG +
Preference number: 2 (lower is better)
Translates to: FFPSLNSDGFQRRNSVVKEVHIK*PQGSIL
Trigger: CAAGATTGAGCCTTGTGGGCATTTGATGTGCACCTC...CTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp CATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HRLLSILVSTVLAAIDLDDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...GTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp ACATTCAGGTTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCACAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 2 (lower is better)
Translates to: TFRFFPSLNSDGFQRRNSQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...TGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
3UTR CAA 90 bp AGGCATAAGTATCAGGGGACCTTGTTATATAACTTCAGTACAGCATaGTCTTATACAAGTGTTCTCTCTTCCACATCTGTAGTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: RHKYQGTLLYNFSTA*SYTSVLSSTSVVAA
Trigger: AGCAGCTACTACAGATGTGGAAGAGAGAACACTTGTATAAGACAATGCTGTACTGAAGTTATATAACAAGGTCCCCTGATACTTATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR CAA 90 bp TCTCTTTATTTCCACACTCTTGGAATACATCGATTGCTTTCCATTTaGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATA +
Preference number: 2 (lower is better)
Translates to: SLYFHTLGIHRLLSI*VSTVLAAIDLDVGI
Trigger: TATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp CCTCAAAGTAATGCAGGCATAAGTATCAGGGGACCTTGTTATATAACTTCAGTACTCCTCTATGTTATGTaGAAACCCCTTACAAAAGGC +
Preference number: 2 (lower is better)
Translates to: PQSNAGISIRGPCYITSVLLYVM*KPLTKG
Trigger: GCCTTTTGTAAGGGGTTTTCACATAACATAGAGGAG...TACTGAAGTTATATAACAAGGTCCCCTGATACTTATGCCTGCATTACTTTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp ACATTCAGGTTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAAGATTTTTACAGTTGTaGCACCCCTGGGATGACAGA +
Preference number: 2 (lower is better)
Translates to: TFRFFPSLNSDGFQRRNSRFLQL*HPWDDR
Trigger: TCTGTCATCCCAGGGGTGTCACAACTGTAAAAATCT...TGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp AAGAGGAGACACAGAAATATGCACAAACCCACAATTAGTCCATATTTAGAAAACCAGAGAGGGAAGAGCTaGAGGTTGTATTTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: KRRHRNMHKPTISPYLENQRGKS*RLYLWK
Trigger: CTTCCACAAATACAACCTTCAGCTCTTCCCTCTCTG...GTTTTCTAAATATGGACTAATTGTGGGTTTGTGCATATTTCTGTGTCTCCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp CATAATTTAATTAGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTGCTTAAAACCTGACTaGTGCCCAACTACTACACTA +
Preference number: 2 (lower is better)
Translates to: HNLISVSGTGAHAARKASCLKPD*CPTTTL
Trigger: TAGTGTAGTAGTTGGGCATCAGTCAGGTTTTAAGCA...ACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCTAATTAAATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR TCA 90 bp AGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAACTTGCTTAAAACCTaGCTGATGCCCAACTACTAC +
Preference number: 2 (lower is better)
Translates to: SVSGTGAHAARKASSYLLNLLKT*LMPNYY
Trigger: GTAGTAGTTGGGCATCAGTCAGGTTTTAAGCAAGTT...TAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR CCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGTTATTTCCACACTCTTaGAATACATCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: ILVSTVLAAIDLDVGILELFPHS*NTSIAF
Trigger: GAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAA...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp CATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 2 (lower is better)
Translates to: HRLLSILVSTVLAAIDLDLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...GTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR TCA 90 bp AACAATGTTATCACAATGAAGTGGCAACTTTTGGCCTTTAGACTGTACCTATCAAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 2 (lower is better)
Translates to: NNVITMKWQLLAFRLYLSKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...TGATAGGTACAGTCTAAAGGCCAAAAGTTGCCACTTCATTGTGATAACATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR GCA 90 bp CATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACATCATATGTGAGAAATaGCATGTAACCTGGATGTGT +
Preference number: 2 (lower is better)
Translates to: HRLLSILVSTVLAAIDLDIICEK*HVTWMC
Trigger: ACACATCCAGGTTACATGGCATTTCTCACATATGAT...GTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CCA 90 bp ATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGTTATTTCCACACTCTTaGAATACATCGATTGCTTTC +
Preference number: 2 (lower is better)
Translates to: IAFHFGVYSSGCYRFRRGLFPHS*NTSIAF
Trigger: GAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAA...CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CCA 90 bp ACATTCAGGTTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCATATATTTCAGGGAGATaGTCCTCTCATTCAGCATCC +
Preference number: 2 (lower is better)
Translates to: TFRFFPSLNSDGFQRRNSYISGR*SSHSAS
Trigger: GGATGCTGAATGAGAGGACCATCTCCCTGAAATATA...TGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR CAA 90 bp TTCCATCTCAGTTCTCTTTATTTCCACACTCTTGGAATACATCGATaGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTA +
Preference number: 2 (lower is better)
Translates to: FHLSSLYFHTLGIHR*LSILVSTVLAAIDL
Trigger: TAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAAAGAGAACTGAGATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CAA 90 bp CAAAAGCATCTTCACCCTTTAAATATATGCTTAAGTCAGGGATGTTaGATTTCTTCTCTGAAGATGGACCATGTGTTCCATTCAGCATAC +
Preference number: 2 (lower is better)
Translates to: QKHLHPLNICLSQGC*ISSLKMDHVFHSAY
Trigger: GTATGCTGAATGGAACACATGGTCCATCTTCAGAGAAGAAATCAAACATCCCTGACTTAAGCATATATTTAAAGGGTGAAGATGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR TCA 90 bp TATACATTCAGGTTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 2 (lower is better)
Translates to: YTFRFFPSLNSDGFQRRNKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...GTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAATGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp AAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGAATAACTTGCTTAAAACCTaGCTGATGCCCAACTACTAC +
Preference number: 2 (lower is better)
Translates to: KWNWCSCCKKSKFIFIKNNLLKT*LMPNYY
Trigger: GTAGTAGTTGGGCATCAGTCAGGTTTTAAGCAAGTT...ATTCTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR TCA 90 bp AAGAGGAGACACAGAAATATGCACAAACCCACAATTAGTCCATATTTAGAAAACCAAATCTTACAGAGCTaGAAAGTGGAGCCCATTTCA +
Preference number: 2 (lower is better)
Translates to: KRRHRNMHKPTISPYLENQILQS*KVEPIS
Trigger: TGAAATGGGCTCCACTTTTCAGCTCTGTAAGATTTG...GTTTTCTAAATATGGACTAATTGTGGGTTTGTGCATATTTCTGTGTCTCCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR CCA 90 bp TATACATTCAGGTTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: YTFRFFPSLNSDGFQRRNDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...GTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAATGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR TCA 90 bp TTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAGTAGTGAAGCAGCTCAGAACCATCTaGAAAAATTCATACAAAAGC +
Preference number: 2 (lower is better)
Translates to: FFPSLNSDGFQRRNSVVKQLRTI*KNSYKS
Trigger: GCTTTTGTATGAATTTTTTCAGATGGTTCTGAGCTG...CTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR TCA 90 bp AGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGAATTAAATTCACAACCCAGTaGGTCTGTGTTATACTGAAC +
Preference number: 2 (lower is better)
Translates to: SGTGAHAARKASSYLLRIKFTTQ*VCVILN
Trigger: GTTCAGTATAACACAGACTCACTGGGTTGTGAATTT...AATTCTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR CAA 90 bp AATCAAAAACATCTCCCTTTAAATATATGCTTAAGTCAGGGATGTTaGATTTCTTCTCTGAAGATGGACCATGTGTTCCATTCAGCATAC +
Preference number: 2 (lower is better)
Translates to: NQKHLPLNICLSQGC*ISSLKMDHVFHSAY
Trigger: GTATGCTGAATGGAACACATGGTCCATCTTCAGAGAAGAAATCAAACATCCCTGACTTAAGCATATATTTAAAGGGAGATGTTTTTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR GCA 90 bp TATACATTCAGGTTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTTGGAATACATCGATTaGTTTCCATTTTGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: YTFRFFPSLNSDGFQRRNLEYID*FPFWCL
Trigger: TAGACACCAAAATGGAAAGCAATCGATGTATTCCAA...GTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAATGTATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
3UTR TCA 72 bp TCCAATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTaGATTTCTGGTGCAGTCCTGCGCGGTCGTGGTTTA +
Preference number: 3 (lower is better)
Translates to: SNAASGPWGFLW*ISGAVLRGRGL
Trigger: TAAACCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR GCA 72 bp AGGGGAGAGGATCCTGGTGATGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGGACGTTTGCCAACCGA +
Preference number: 3 (lower is better)
Translates to: RGEDPGDVTGEF*LSVHFRTFANR
Trigger: TCGGTTGGCAAACGTCCGAAAGTGCACTGACAGGCAGAACTCACCAGTCACATCACCAGGATCCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 72 bp GAGGGCACCATGCTTCAAGAGGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACATGATGGATGTGTCTAC +
Preference number: 3 (lower is better)
Translates to: EGTMLQEALAGL*KARFPHDGCVY
Trigger: GTAGACACATCCATCATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CAA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCAAGCATCGGTCTCCTTaGAGAAGCTGCACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFKHRSP*RSCTPK
Trigger: CTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTT...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAATGGTCTCGTGAACTaGGGAGTCACCGGCACCTGG +
Preference number: 3 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATNGLVN*GVTGTW
Trigger: CCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATT...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR TCA 72 bp TTCTTCTCTGGGCAAGGGGAGAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGTCAGTGCACTTTCGGA +
Preference number: 3 (lower is better)
Translates to: FFSGQGERILVM*LVSSACQCTFG
Trigger: TCCGAAAGTGCACTGACAGGCAGAACTCACCAGTCACATCACCAGGATCCTCTCCCCTTGCCCAGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR TCA 72 bp GGCATTGGCGGGTCTCTGGAAGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGTCTATTGTCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: GIGGSLEGTLST*WMCLLSLLSGG
Trigger: CCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 72 bp AAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGGGATCAGAGGCTGAAT +
Preference number: 3 (lower is better)
Translates to: KNHALDCPELEA*QVVMARDQRLN
Trigger: ATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
3UTR-3UTR CAA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGCGATTGCTTTCCATTTaGGTGTCTACAGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSRLLSI*VSTVLA
Trigger: AGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR TCA 72 bp GTTCCTTTTATTTCACAACGACAGAAAGGGCAGCCCTaGCCATCCGACTCCTGCCATGCCGTAAGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: VPFISQRQKGQP*PSDSCHAVRQE
Trigger: CTCTTGCCTTACGGCATGGCAGGAGTCGGATGGTCAGGGCTGCCCTTTCTGTCGTTGTGAAATAAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR TCA 72 bp CGTCCAAGTCTAGCATCGGCATGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGCCTTCATCTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: RPSLASACQRGQ*CCNTWSLHLLD
Trigger: ATCCAAGAGATGAAGGCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCATGCCGATGCTAGACTTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR GCA 72 bp GGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATaGTCCGGGCAACTTCGACATTATTCTGGGCTATCT +
Preference number: 3 (lower is better)
Translates to: GILEEGRQILGG*SGQLRHYSGLS
Trigger: AGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CCA 72 bp ATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGGCGGTGGAGGAGGATC +
Preference number: 3 (lower is better)
Translates to: MDVSTQSIVWWD*WRSFRWRWRRI
Trigger: GATCCTCCTCCACCGCCACCTGAAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 72 bp CACATGATGGATGTGTCTACTCAGTCTATTGTCTGGTaGGATTGGTGGAGGTCTTTCAGGTGGCGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: HMMDVSTQSIVW*DWWRSFRWRWR
Trigger: CCTCCACCGCCACCTGAAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 72 bp AGGCAAATCATGGCGTCTGTGTTTCCGCATAAGCACTaGGTCAGAGCCCACTCTACTGTGCCTTCCATTGAC +
Preference number: 3 (lower is better)
Translates to: RQIMASVFPHKH*VRAHSTVPSID
Trigger: GTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTATGCGGAAACACAGACGCCATGATTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CAA 90 bp TGCTTCCAGGCCAGAGCTAATCTGGTGGACCTCATGAAGGCACTGTCTGAATACAAGCATCGGTCTCCTTaGAGAAGCTGCACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: CFQARANLVDLMKALSEYKHRSP*RSCTPK
Trigger: CTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTT...GTATTCAGACAGTGCCTTCATGAGGTCCACCAGATTAGCTCTGGCCTGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR CAA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAAGCATCGGTCTCCTTaGAGAAGCTGCACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: NKEATAVDILSKHRSPLRKHRSP*RSCTPK
Trigger: CTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCTGGACAGCAAGAGAGTaGGTGGGAAATGTTACAGCA +
Preference number: 3 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPWTARE*VGNVTA
Trigger: TGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCA...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTATGCAAGGAGAAGACTTaGGTGAACCCGTTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: MWTARELVGNVTADLTTLCKEKT*VNPLGC
Trigger: GCAGCCCAACGGGTTCACCAAAGTCTTCTCCTTGCA...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CAA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGAACAAAGGGATCACCTaGGCAGTCAGAGACGGGGCA +
Preference number: 3 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLNKGIT*AVRDGA
Trigger: TGCCCCGTCTCTGACTGCCAAGGTGATCCCTTTGTT...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR-3UTR CAA 90 bp AGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTAAGCATCGGTCTCCTTaGAGAAGCTGCACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: RQILGGCSGQLRHYSGLSKHRSP*RSCTPK
Trigger: CTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTT...AGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACATCAGAGGGCGTCCTGTaGAGTGAAGAACCATGCTTT +
Preference number: 3 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATSEGVL*SEEPCF
Trigger: AAAGCATGGTTCTTCACTCAACAGGACGCCCTCTGA...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR CAA 90 bp ATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTGAACTCATGCTTCAAGAGGCATaGGCGGGTCTCTGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: ISTGSEPTLLCLPLTFELMLQEA*AGLWKA
Trigger: TGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCAT...GAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR TCA 72 bp GTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTaGACTCGCTGTGATTCCAGGTTTTGGAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: VRAHSTVPSIDI*TRCDSRFWRAL
Trigger: GAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 72 bp GTCAATGATGCTGCAACACCTGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGATTATGGGCTCAGTTCC +
Preference number: 3 (lower is better)
Translates to: VNDAATPGAFIS*IKGVHDYGLSS
Trigger: GGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCCAGGTGTTGCAGCATCATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CAA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTGGACAGCAAGAGAGTaGGTGGGAAATGTTACAGCA +
Preference number: 3 (lower is better)
Translates to: SKNKEATAVDILSKHRSPWTARE*VGNVTA
Trigger: TGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCA...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAATTGCCACAGTAGCCTaGACACTCAACAGTGCAACG +
Preference number: 3 (lower is better)
Translates to: MWTARELVGNVTADLTTLIATVA*TLNSAT
Trigger: CGTTGCACTGTTGAGTGTCAAGGCTACTGTGGCAAT...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR GCA 72 bp TTCCGCATAAGCACTGGGTCAGAGCCCACTCTACTGTaGCTTCCATTGACATTTGAACTCGCTGTGATTCCA +
Preference number: 3 (lower is better)
Translates to: FRISTGSEPTLL*LPLTFELAVIP
Trigger: TGGAATCACAGCGAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTATGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 72 bp TCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTaGCCACTTGCTAGATCAACAAAGGGATCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: SPGNLLAGGKGT*PLARSTKGSWQ
Trigger: CTGCCAAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643322.1
ENST00000646499.1
3UTR CCA 72 bp TCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTaGGCTATCTCTAAGGCTCTCTTCACCTCTTCAAAG +
Preference number: 3 (lower is better)
Translates to: SRRMLRATSTLF*AISKALFTSSK
Trigger: CTTTGAAGAGGTGAAGAGAGCCTTAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CCA 72 bp TCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTaGCCACTTGCTAGATCAACAAAGGGATCACCTTGG +
Preference number: 3 (lower is better)
Translates to: SPGNLLAGGKGT*PLARSTKGSPW
Trigger: CCAAGGTGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR-3UTR CAA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGACGATTGCTTTCCATTTaGGTGTCTACAGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: NKEATAVDILSKHRSPLRRLLSI*VSTVLA
Trigger: AGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTACGATTGCTTTCCATTTaGGTGTCTACAGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLRLLSI*VSTVLA
Trigger: AGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACCTTGGAATACATCGATaGCTTTCCATTTTGGTGTCT +
Preference number: 3 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHLGIHR*LSILVS
Trigger: AGACACCAAAATGGAAAGCAATCGATGTATTCCAAG...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCTTGGAATACATCGATaGCTTTCCATTTTGGTGTCT +
Preference number: 3 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSLGIHR*LSILVS
Trigger: AGACACCAAAATGGAAAGCAATCGATGTATTCCAAG...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp GTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCAAAGCATCGGTCTCCTTaGAGAAGCTGCACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: VLTFSPGNLLAGGKGTWPKHRSP*RSCTPK
Trigger: CTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTT...TGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATGGACAGCAAGAGAGTaGGTGGGAAATGTTACAGCA +
Preference number: 3 (lower is better)
Translates to: AAIDLDVGILEEGRQILGWTARE*VGNVTA
Trigger: TGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCA...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCTGGACAGCAAGAGAGTaGGTGGGAAATGTTACAGCA +
Preference number: 3 (lower is better)
Translates to: QASSQAATRGGDTSLLNSWTARE*VGNVTA
Trigger: TGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCA...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCCATCATATCCTAAGTTaGCTATTTGTCAGCCATAGG +
Preference number: 3 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPHHILS*LFVSHR
Trigger: CCTATGGCTGACAAATAGCAAACTTAGGATATGATG...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643322.1
3UTR TCA 72 bp CAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCTGTGAAGAACACAGTA +
Preference number: 3 (lower is better)
Translates to: QQESWWEMLQQT*PRYKGSVKNTV
Trigger: TACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR TCA 72 bp GATGAGAAGATCATAATCAGAGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATTGTCCCGAGTTGGAGG +
Preference number: 3 (lower is better)
Translates to: DEKIIIRGRPVE*RTMLWIVPSWR
Trigger: CCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTGATTATGATCTTCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
3UTR TCA 72 bp CTTCACCTTAATCATCTACATGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCACCTGGAGAACCCATT +
Preference number: 3 (lower is better)
Translates to: LHLNHLHGVMVS*TWESPAPGEPI
Trigger: AATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACTCCATGTAGATGATTAAGGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
3UTR CCA 72 bp TCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTaGCCACTTGCTAGATCAACAAAGGGATCTGAAGGA +
Preference number: 3 (lower is better)
Translates to: SPGNLLAGGKGT*PLARSTKGSEG
Trigger: TCCTTCAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR CAA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCGATTGCTTTCCATTTaGGTGTCTACAGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFRLLSI*VSTVLA
Trigger: AGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp CACTTTGCAAAGGAATGTATTAACTCCTCTCCCAGGGTCAACTTAGTCTACGTGTGGAGCCTTCATCTCTaGGATCAAAGGGGTCCACGA +
Preference number: 3 (lower is better)
Translates to: HFAKECINSSPRVNLVYVWSLHL*DQRGPR
Trigger: TCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCCA...CACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645759.1
3UTR-3UTR CAA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATGAAGTGGCAACTTTaGGCCTTTAGACTGTACCTA +
Preference number: 3 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGMKWQL*AFRLYL
Trigger: TAGGTACAGTCTAAAGGCCAAAAGTTGCCACTTCAT...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR CAA 90 bp TTAATTAGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATAATGGTCTCGTGAACTaGGGAGTCACCGGCACCTGG +
Preference number: 3 (lower is better)
Translates to: LISVSGTGAHAARKASSYNGLVN*GVTGTW
Trigger: CCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATT...ATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCTAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR CAA 90 bp CTTGGATCAAAGGGGTCCACGATTATGGGCTCAGTTCCTTTTATTTCACAACGAGTGAAGAACCATGCTTaGGATTGTCCCGAGTTGGAG +
Preference number: 3 (lower is better)
Translates to: LGSKGSTIMGSVPFISQRVKNHA*DCPELE
Trigger: CTCCAACTCGGGACAATCCAAAGCATGGTTCTTCAC...TCGTTGTGAAATAAAAGGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR TCA 72 bp TACTACCTTAATCATCTACATGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCACCTGGAGAACCCATT +
Preference number: 3 (lower is better)
Translates to: YYLNHLHGVMVS*TWESPAPGEPI
Trigger: AATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACTCCATGTAGATGATTAAGGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR TCA 72 bp ATTGCTTCCAGGCCAGAGCTAATCTGGTGGACCTCATaGAGGCACTGTCTGAATACTTTCCATGGTACGATA +
Preference number: 3 (lower is better)
Translates to: IASRPELIWWTS*RHCLNTFHGTI
Trigger: TATCGTACCATGGAAAGTATTCAGACAGTGCCTTCATGAGGTCCACCAGATTAGCTCTGGCCTGGAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR GCA 72 bp TCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTaGTATAGATTTAGACGTGGGGATACTGGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: SIAFHFGVYSSG*YRFRRGDTGGG
Trigger: CCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CCA 72 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTaGAGAACCCATTCAAATTTCAGGCAAATTCACAAC +
Preference number: 3 (lower is better)
Translates to: SNGLVNLGVTGT*RTHSNFRQIHN
Trigger: GTTGTGAATTTGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
3UTR CCA 72 bp TTGGAAAAGACCTTAGCTCCTTCTAAAGGCAAATCATaGCGTCTGTGTTTCCGCATAAGCACTGGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: LEKTLAPSKGKS*RLCFRISTGSE
Trigger: CTCTGACCCAGTGCTTATGCGGAAACACAGACGCCATGATTTGCCTTTAGAAGGAGCTAAGGTCTTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CAA 90 bp CATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGAGGTCTTTCGATTGCTTTCCATTTaGGTGTCTACAGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: HDGCVYSVYCLVGLVEVFRLLSI*VSTVLA
Trigger: AGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG...AAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CAA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGCTTGGAATACATCGATaGCTTTCCATTTTGGTGTCT +
Preference number: 3 (lower is better)
Translates to: KNKEATAVDILSKHRSPLLGIHR*LSILVS
Trigger: AGACACCAAAATGGAAAGCAATCGATGTATTCCAAG...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTAAGTATCAGGGGACCTaGTTATATAACTTCAGTACA +
Preference number: 3 (lower is better)
Translates to: SKNKEATAVDILSKHRSPKYQGT*LYNFST
Trigger: TGTACTGAAGTTATATAACAAGGTCCCCTGATACTT...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR CAA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTGGAATGTCTAACTTTTaGGATCACAGTGAAACAAAG +
Preference number: 3 (lower is better)
Translates to: SKNKEATAVDILSKHRSPGMSNF*DHSETK
Trigger: CTTTGTTTCACTGTGATCCAAAAAGTTAGACATTCC...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR CAA 90 bp GTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGAAATGGTCTCGTGAACTaGGGAGTCACCGGCACCTGG +
Preference number: 3 (lower is better)
Translates to: VSGTGAHAARKASSYLLRNGLVN*GVTGTW
Trigger: CCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATT...TCTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
3UTR-3UTR CAA 90 bp CGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGGAACCATGCTTTGGATaGTCCCGAGTTGGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: RKWNWCSCCKKSKFIFIKEPCFG*SRVGGL
Trigger: CAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTC...CTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403724.5
3UTR-3UTR CAA 90 bp CTGGAGAACCCATTCAAATTTCAGGCAAATTCACAACCCAGTGAGTCTGTGTTATCAGAGGGCGTCCTGTaGAGTGAAGAACCATGCTTT +
Preference number: 3 (lower is better)
Translates to: LENPFKFQANSQPSESVLSEGVL*SEEPCF
Trigger: AAAGCATGGTTCTTCACTCAACAGGACGCCCTCTGA...TAACACAGACTCACTGGGTTGTGAATTTGCCTGAAATTTGAATGGGTTCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403724.5
3UTR-3UTR CAA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATCTTGGAATACATCGATaGCTTTCCATTTTGGTGTCT +
Preference number: 3 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHLGIHR*LSILVS
Trigger: AGACACCAAAATGGAAAGCAATCGATGTATTCCAAG...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTAGCAATGGGTCTTTCTaGACAGTGTTTAATAGAAAG +
Preference number: 3 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGSNGSF*TVFNRK
Trigger: CTTTCTATTAAACACTGTCAAGAAAGACCCATTGCT...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR TCA 72 bp TGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTaGAGAACACAGTACAGGTATCAAAACACCAAAACA +
Preference number: 3 (lower is better)
Translates to: CYSRPDHATKGL*RTQYRYQNTKT
Trigger: TGTTTTGGTGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp AACAATGTTATCACAATGAAGTGGCAACTTTTGGCCTTTAGACTGTACCTATCAAAGCATCGGTCTCCTTaGAGAAGCTGCACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: NNVITMKWQLLAFRLYLSKHRSP*RSCTPK
Trigger: CTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTT...TGATAGGTACAGTCTAAAGGCCAAAAGTTGCCACTTCATTGTGATAACATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR CAA 90 bp TTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAGTAGTGAAGTGGAGCCTTCATCTCTaGGATCAAAGGGGTCCACGA +
Preference number: 3 (lower is better)
Translates to: FFPSLNSDGFQRRNSVVKWSLHL*DQRGPR
Trigger: TCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCCA...CTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR-3UTR CAA 90 bp CTTGTTTTCTCTGAAAGAGAATTTGCTAACGGACCAGTACACTTTATGCTAGGGTGCACTTTCGGACGTTaGCCAACCGATTCATCATCA +
Preference number: 3 (lower is better)
Translates to: LVFSEREFANGPVHFMLGCTFGR*PTDSSS
Trigger: TGATGATGAATCGGTTGGCAAACGTCCGAAAGTGCA...CCCTAGCATAAAGTGTACTGGTCCGTTAGCAAATTCTCTTTCAGAGAAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR TCA 72 bp TCTGAAGATGGACCATGTGTTCCATTCAGCATACAGTaGCCATTATCACAAGACCGAACAGGAGGTTTTACA +
Preference number: 3 (lower is better)
Translates to: SEDGPCVPFSIQ*PLSQDRTGGFT
Trigger: TGTAAAACCTCCTGTTCGGTCTTGTGATAATGGTCACTGTATGCTGAATGGAACACATGGTCCATCTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
3UTR CCA 72 bp AGGATAAGTCCTTCTATCTCCAGAACATGTTTGGGTTaGGTGAGAAGGGTTGATATTGGCCACATATCAGTA +
Preference number: 3 (lower is better)
Translates to: RISPSISRTCLG*VRRVDIGHISV
Trigger: TACTGATATGTGGCCAATATCAACCCTTCTCACCCAACCCAAACATGTTCTGGAGATAGAAGGACTTATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR TCA 72 bp TCTGCTTTTGTGATACGAAAGTTATCTCCCTGGAATTaGCCATTGGGAAAGATTGCTTTGATTTCTGCCAGC +
Preference number: 3 (lower is better)
Translates to: SAFVIRKLSPWN*PLGKIALISAS
Trigger: GCTGGCAGAAATCAAAGCAATCTTTCCCAATGGTCAATTCCAGGGAGATAACTTTCGTATCACAAAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646499.1
3UTR-3UTR CAA 90 bp CGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGCTTGGAATACATCGATaGCTTTCCATTTTGGTGTCT +
Preference number: 3 (lower is better)
Translates to: RLLSILVSTVLAAIDLDVLGIHR*LSILVS
Trigger: AGACACCAAAATGGAAAGCAATCGATGTATTCCAAG...CACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp ATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGCTTGGAATACATCGATaGCTTTCCATTTTGGTGTCT +
Preference number: 3 (lower is better)
Translates to: IAFHFGVYSSGCYRFRRGLGIHR*LSILVS
Trigger: AGACACCAAAATGGAAAGCAATCGATGTATTCCAAG...CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR-3UTR CAA 90 bp AAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGAATGTGAAGAACCATGCTTaGGATTGTCCCGAGTTGGAG +
Preference number: 3 (lower is better)
Translates to: KWNWCSCCKKSKFIFIKNVKNHA*DCPELE
Trigger: CTCCAACTCGGGACAATCCAAAGCATGGTTCTTCAC...ATTCTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403724.5
3UTR-3UTR CAA 90 bp AACAATGTTATCACAATGAAGTGGCAACTTTTGGCCTTTAGACTGTACCTATCACTTGGAATACATCGATaGCTTTCCATTTTGGTGTCT +
Preference number: 3 (lower is better)
Translates to: NNVITMKWQLLAFRLYLSLGIHR*LSILVS
Trigger: AGACACCAAAATGGAAAGCAATCGATGTATTCCAAG...TGATAGGTACAGTCTAAAGGCCAAAAGTTGCCACTTCATTGTGATAACATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR CAA 90 bp TTTTTCCCATCTCTCAATAGTGATGGTTTCCAAAGAAGAAACTCAGTAGTGAAGTTTCTTTCACCTGATTaGATAAAGCAGTGTGGAGCA +
Preference number: 3 (lower is better)
Translates to: FFPSLNSDGFQRRNSVVKFLSPD*IKQCGA
Trigger: TGCTCCACACTGCTTTATCAAATCAGGTGAAAGAAA...CTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR CAA 90 bp AACAATGTTATCACAATGAAGTGGCAACTTTTGGCCTTTAGACTGTACCTATCATCAGCTTTTGAGAGTTaGTGCTTTAAAAACACAGTG +
Preference number: 3 (lower is better)
Translates to: NNVITMKWQLLAFRLYLSSAFES*CFKNTV
Trigger: CACTGTGTTTTTAAAGCACAAACTCTCAAAAGCTGA...TGATAGGTACAGTCTAAAGGCCAAAAGTTGCCACTTCATTGTGATAACATTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
3UTR-3UTR CAA 90 bp AAGAGGAGACACAGAAATATGCACAAACCCACAATTAGTCCATATTTAGAAAACCGCTGGAATCAGCTTTaGAGAGTTTGTGCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: KRRHRNMHKPTISPYLENRWNQL*RVCALK
Trigger: TTTTAAAGCACAAACTCTCAAAAGCTGATTCCAGCG...GTTTTCTAAATATGGACTAATTGTGGGTTTGTGCATATTTCTGTGTCTCCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTGGTGGCAGGTGGGCGTaGGCGTCGGGACCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSGGRWA*ASGPGA
Trigger: GGCTCCCGGTCCCGACGCTCACGCCCACCTGCCACC...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643322.1
CDS-3UTR CCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGAGTCCTGCGCGGTCGTaGTTTAGGGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSSPARS*FRGSGW
Trigger: CCAGCCAGACCCCCTAAACCACGACCGCGCAGGACT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCATGGGAGTGGGATCGCTaGGAACAGCTCGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: SRVGGLAGGNGTGSEAESWEWDR*EQLAPE
Trigger: TTCGGGAGCGAGCTGTTCTCAGCGATCCCACTCCCA...TGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAATGGGAGTGGGATCGCTaGGAACAGCTCGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHEWEWDR*EQLAPE
Trigger: TTCGGGAGCGAGCTGTTCTCAGCGATCCCACTCCCA...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645425.1
ENST00000646499.1
CDS-3UTR GCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCCAGAGACACGCGTGTaGGCGGGTCCCACTCCACAC +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRPETRV*AGPTPH
Trigger: GTGTGGAGTGGGACCCGCGCACACGCGTGTCTCTGG...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGAATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp AGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGTGGATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: RPMGFSVVNFWCSPARSWIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...CCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAGAGGAGACCGCTCGCTaGACACCCCACCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQAEETAR*TPHPCG
Trigger: GCCACAGGGGTGGGGTGTCCAGCGAGCGGTCTCCTC...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCTGGGAGTGGGATCGCTaGGAACAGCTCGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSWEWDR*EQLAPE
Trigger: TTCGGGAGCGAGCTGTTCTCAGCGATCCCACTCCCA...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000646499.1
CDS-3UTR TCA 90 bp GACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAATGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DVGILEEGRQILGGCSGQCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...TTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SRVGGLAGGNGTGSEAESRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...TGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTCCAGAGACACGCGTGTaGGCGGGTCCCACTCCACAC +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPPETRV*AGPTPH
Trigger: GTGTGGAGTGGGACCCGCGCACACGCGTGTCTCTGG...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000646499.1
CDS-3UTR GCA 90 bp GAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACACGGTCCTGCGATCTaGGGCAGCTTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: ELEAWQVVMARDQRLNQKHGPAI*GSLLRG
Trigger: CCCCCTAAGCAAGCTGCCGCAGATCGCAGGACCGTG...TTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACCACGGTCCTGCGATCTaGGGCAGCTTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDHGPAI*GSLLRG
Trigger: CCCCCTAAGCAAGCTGCCGCAGATCGCAGGACCGTG...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAAGTCCTGCGCGGTCGTaGTTTAGGGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETSPARS*FRGSGW
Trigger: CCAGCCAGACCCCCTAAACCACGACCGCGCAGGACT...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCTGTGGTGAATTTCTaGTGCAGTCCTGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RGDTGGGKANSRRMLRATSVVNF*CSPARS
Trigger: CGACCGCGCAGGACTGCACCAGAAATTCACCACAGA...AGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAATGGGAGTGGGATCGCTaGGAACAGCTCGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: ELEAWQVVMARDQRLNQKWEWDR*EQLAPE
Trigger: TTCGGGAGCGAGCTGTTCTCAGCGATCCCACTCCCA...TTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSRILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: WGYWRREGKFSEDAPGNFQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...GAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQAVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGAAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646499.1
CDS-3UTR CCA 90 bp TCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCACAGGCCTCCGAGACGTaGAAACGCAACAATTACCGT +
Preference number: 4 (lower is better)
Translates to: SRVGGLAGGNGTGSEAESQASET*KRNNYR
Trigger: ACGGTAATTGTTGCGTTTCCACGTCTCGGAGGCCTG...TGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR CCA 90 bp CGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: RGDTGGGKANSRRMLRATCGFLL*ARGEDP
Trigger: AGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACA...AGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: LEAWQVVMARDQRLNQKHPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...ATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR CCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGTCCTGCGCGGTCGTaGTTTAGGGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRSPARS*FRGSGW
Trigger: CCAGCCAGACCCCCTAAACCACGACCGCGCAGGACT...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAATCTGTGGTGAATTTCTaGTGCAGTCCTGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHESVVNF*CSPARS
Trigger: CGACCGCGCAGGACTGCACCAGAAATTCACCACAGA...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGAAATGGAACTGGACCTaGGCAAGGCATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSKWNWT*ARHGDG
Trigger: ACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CAA 72 bp GAGGGCGTCCTGTTGAGTGAAGAACCATGCTTTGGATaGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: EGVLLSEEPCFG*SRVGGLAGGNG
Trigger: GCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGACGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp CCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: PELEAWQVVMARDQRLNQGTLST*WMCLLS
Trigger: ACTGAGTAGACACATCCATCATGTGGAAAGCGTGCC...TTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp AGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGTGGCGACATCCCACAAGCTaGTTAGTCCCAAACACATCC +
Preference number: 4 (lower is better)
Translates to: RPMGFSVVNFWCSPARSWRHPTS*LVPNTS
Trigger: GGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCG...CCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGAGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAAAAAAAGATCCTGTCCTaGGGATGGCCGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHEKKILS*GWPATG
Trigger: TCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTT...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGAATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646499.1
CDS-3UTR GCA 90 bp GCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATTGGAAAAGACCTCCAGAGACACGCGTGTaGGCGGGTCCCACTCCACAC +
Preference number: 4 (lower is better)
Translates to: AGEEHHILHFQGDHWKRPPETRV*AGPTPH
Trigger: GTGTGGAGTGGGACCCGCGCACACGCGTGTCTCTGG...AGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646499.1
CDS-3UTR GCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACCGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGCACGGTCCTGCGATCTaGGGCAGCTTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLHGPAI*GSLLRG
Trigger: CCCCCTAAGCAAGCTGCCGCAGATCGCAGGACCGTG...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACATCGACATTTTCCAATaGCGCCTCAGGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHIDIFQ*RLRPMG
Trigger: CCCCATGGGCCTGAGGCGGCATTGGAAAATGTCGAT...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCCGFLL*ARGEDP
Trigger: AGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACA...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: WGYWRREGKFSEDAPGNFCGFLL*ARGEDP
Trigger: AGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACA...GAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTGTGGTGAATTTCTaGTGCAGTCCTGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFSVVNF*CSPARS
Trigger: CGACCGCGCAGGACTGCACCAGAAATTCACCACAGA...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTTGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQARILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACCTTCCATTGACATTTaGACTCGCTGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: DVGILEEGRQILGGCSGQPSIDI*TRCDSR
Trigger: CCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGG...TTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCACCTTCCATTGACATTTaGACTCGCTGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRVGGLAGGNGTGSEAESPSIDI*TRCDSR
Trigger: CCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGG...TGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGCACGGGATCAGAGGCTaGATCAAAAACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSHGIRG*IKNISL
Trigger: AAGGGAGATGTTTTTGATTCAGCCTCTGATCCCGTG...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGACACGGGATCAGAGGCTaGATCAAAAACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGHGIRG*IKNISL
Trigger: AAGGGAGATGTTTTTGATTCAGCCTCTGATCCCGTG...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646499.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCAAAAAGATCCTGTCCTaGGGATGGCCGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQAKKILS*GWPATG
Trigger: TCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTT...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGKANSRRMLRATSTLFWQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAAACACCAGAGACACGCGTGTaGGCGGGTCCCACTCCACAC +
Preference number: 4 (lower is better)
Translates to: DLTTLQRVCEEHSTGIKTPETRV*AGPTPH
Trigger: GTGTGGAGTGGGACCCGCGCACACGCGTGTCTCTGG...TGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000646499.1
CDS-3UTR GCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGAGACCACCAGGGTTTCTaGCATTCATTGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGDHQGF*HSLSLP
Trigger: TGGCAAACTCAATGAATGGCAGAAACCCTGGTGGTC...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp TTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: LEAWQVVMARDQRLNQKHRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...ATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGCGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: RREGKFSEDAPGNFDIILRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTCACGGTCCTGCGATCTaGGGCAGCTTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSHGPAI*GSLLRG
Trigger: CCCCCTAAGCAAGCTGCCGCAGATCGCAGGACCGTG...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTACACGGTCCTGCGATCTaGGGCAGCTTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLHGPAI*GSLLRG
Trigger: CCCCCTAAGCAAGCTGCCGCAGATCGCAGGACCGTG...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATCACGGTCCTGCGATCTaGGGCAGCTTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHHGPAI*GSLLRG
Trigger: CCCCCTAAGCAAGCTGCCGCAGATCGCAGGACCGTG...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACATCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATSSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCATCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQASSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAATCCGACTCCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETIRLLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGGAGTCGGAT...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATATCCGACTCCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHIRLLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGGAGTCGGAT...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: WSRELGSHRHLENPFKFQVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...CTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR GCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTAACTTCTGGCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPNFWLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGCCAGAAGTT...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR CCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGACCGCTCGCTaGACACCCCACCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SILVSTVLAAIDLDVGILEETAR*TPHPCG
Trigger: GCCACAGGGGTGGGGTGTCCAGCGAGCGGTCTCCTC...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646825.1
CDS-3UTR CCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAGGCCTCCGAGACGTaGAAACGCAACAATTACCGT +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSQASET*KRNNYR
Trigger: ACGGTAATTGTTGCGTTTCCACGTCTCGGAGGCCTG...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394030.8
ENST00000645425.1
ENST00000646499.1
CDS-3UTR CCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATGAGTGGGTCAGGCTGTaGCTTTCTTCTCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHEWVRL*LSSLGK
Trigger: CTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTC...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRLRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGACAGTCTATTGTCTGGTaGGATTGGTGGAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGQSIVW*DWWRSF
Trigger: GAAAGACCTCCACCAATCCCACCAGACAATAGACTG...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR CCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCAGGATGGCCGGCTACTaGAGCCAGGAGGTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSRMAGY*SQEVLN
Trigger: ATTCAAAACCTCCTGGCTCCAGTAGCCGGCCATCCT...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTAAGTCCTGCGCGGTCGTaGTTTAGGGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLSPARS*FRGSGW
Trigger: CCAGCCAGACCCCCTAAACCACGACCGCGCAGGACT...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAATGGAACTGGACCTaGGCAAGGCATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPKWNWT*ARHGDG
Trigger: ACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTT...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCTCAACAAAGGGATCTTaGCAGTCAGAGACGGGGCAT +
Preference number: 4 (lower is better)
Translates to: WGYWRREGKFSEDAPGNFSTKGS*QSETGH
Trigger: ATGCCCCGTCTCTGACTGCCAAGATCCCTTTGTTGA...GAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643322.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAATTACCACTTTGTCCATaGGCTTCCAAGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DVGILEEGRQILGGCSGQLPLCP*ASKSSP
Trigger: TGGAGAAGACTTGGAAGCTCATGGACAAAGTGGTAA...TTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAAATCTGGTGGACCTCATaGAGGCACTGTCTGAATACT +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHEIWWTS*RHCLNT
Trigger: AGTATTCAGACAGTGCCTTCATGAGGTCCACCAGAT...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAAATAGAGCCCCAAGGCTaGAACAGCCTGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: DVGILEEGRQILGGCSGQIEPQG*NSLVKI
Trigger: TATTTTTACCAGGCTGTTTCAGCCTTGGGGCTCTAT...TTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACATGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGTGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WSRELGSHRHLENPFKFQCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...CTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQARRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACATTTGAACTCGCTGTGATTCCAGGTTTTGGAGAGCCCTCCCCTAGGAGTCGAAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: TFELAVIPGFGEPSPRSRRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...TCGACTCCTAGGGGAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCGACATCCCACAAGCTaGTTAGTCCCAAACACATCC +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSRHPTS*LVPNTS
Trigger: GGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCG...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCCATTTGAACTCGCTGTaGTTCCAGGTTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCHLNSL*FQVLES
Trigger: GCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATG...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
CDS-3UTR TCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQAGVMVS*TWESPA
Trigger: TGCCGGTGACTCCCAAGTTCACGAGACCATTACTCC...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
CDS-3UTR TCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGGGAGCCAGGAGGTTTTaGATGTTCAATGAGACTATG +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSGARRF*MFNETM
Trigger: CATAGTCTCATTGAACATTCAAAACCTCCTGGCTCC...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAAAAAAGATCCTGTCCTaGGGATGGCCGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETKKILS*GWPATG
Trigger: TCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTT...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTGGGGTTTTCTGTGGTaGATTTCTGGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFWGFLW*ISGAVL
Trigger: CAGGACTGCACCAGAAATTCACCACAGAAAACCCCA...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQASIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCCGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CCACATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGAGGTCCGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: PHDGCVYSVYCLVGLVEVRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...GACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp CTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCTCCTAGATCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LAGGNGTGSEAESKTSPRSSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...TCTAGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR GCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCTCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFSSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAATCCGACTCCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATIRLLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGGAGTCGGAT...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGG +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRVTGEF*LSVHFR
Trigger: CCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp CGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTGAGCCCACTCTACTGTaGCTTCCATTGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: RGDTGGGKANSRRMLRATEPTLL*LPLTFE
Trigger: TTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTC...AGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GAGGAGGAGAAAGCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: EEEKAGEEHHILHFQGDHVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...ATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR CCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPLRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCCAGTCTATTGTCTGGTaGGATTGGTGGAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCQSIVW*DWWRSF
Trigger: GAAAGACCTCCACCAATCCCACCAGACAATAGACTG...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: WSRELGSHRHLENPFKFQALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...CTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTAGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGTGCTTCAAGAGGCATTaGCGGGTCTCTGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: RREGKFSEDAPGNFDIILCFKRH*RVSGRH
Trigger: GTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCA...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTGCCTGTGAACCATCTGAACATGAAGGAAGCTGATCATAGTCCTGTGATGTTCCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: VPVNHLNMKEADHSPVMFPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...GAACATCACAGGACTATGATCAGCTTCCTTCATGTTCAGATGGTTCACAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAAGGATGGCCGGCTACTaGAGCCAGGAGGTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETRMAGY*SQEVLN
Trigger: ATTCAAAACCTCCTGGCTCCAGTAGCCGGCCATCCT...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCTCTGTGGTGAATTTCTaGTGCAGTCCTGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLSVVNF*CSPARS
Trigger: CGACCGCGCAGGACTGCACCAGAAATTCACCACAGA...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTAAATGGAACTGGACCTaGGCAAGGCATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSKWNWT*ARHGDG
Trigger: ACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTT...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
3UTR CAA 72 bp GATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATaGGTGGAGGTCTTTCAGGTGGCGGTGGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DGCVYSVYCLVG*VEVFQVAVEED
Trigger: ATCCTCCTCCACCGCCACCTGAAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAATTACCACTTTGTCCATaGGCTTCCAAGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHELPLCP*ASKSSP
Trigger: TGGAGAAGACTTGGAAGCTCATGGACAAAGTGGTAA...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AAIDLDVGILEEGRQILGCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: MWTARELVGNVTADLTTLRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCTCCTAGAAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LAGGNGTGSEAESKTSPRRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...TCTAGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR TCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETGTLST*WMCLLS
Trigger: ACTGAGTAGACACATCCATCATGTGGAAAGCGTGCC...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCGACATCCCACAAGCTaGTTAGTCCCAAACACATCC +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRRHPTS*LVPNTS
Trigger: GGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCG...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCCATTTGAACTCGCTGTaGTTCCAGGTTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPHLNSL*FQVLES
Trigger: GCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATG...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCCCTTCCATTGACATTTaGACTCGCTGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFPSIDI*TRCDSR
Trigger: CCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGG...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGTGGTCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: RPMGFSVVNFWCSPARSWSSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...CCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCCCATTCAGCATACAGTaGCCATTATCACAAGACCGA +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCPFSIQ*PLSQDR
Trigger: TCGGTCTTGTGATAATGGTCACTGTATGCTGAATGG...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGGGAGTAATGGTCTCGTaGACTTGGGAGTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLGVMVS*TWESPA
Trigger: TGCCGGTGACTCCCAAGTTCACGAGACCATTACTCC...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTAAAAAGATCCTGTCCTaGGGATGGCCGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPKKILS*GWPATG
Trigger: TCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTT...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACTGGGGTTTTCTGTGGTaGATTTCTGGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDWGFLW*ISGAVL
Trigger: CAGGACTGCACCAGAAATTCACCACAGAAAACCCCA...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: MWTARELVGNVTADLTTLSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCATTACCCAAGGCCTGTaGGTCCTCATCTCATACCAT +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQAITQGL*VLISYH
Trigger: ATGGTATGAGATGAGGACTCACAGGCCTTGGGTAAT...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACCAGAGACGGGGCATCTaGAGGAAGAAGAAAAAGATC +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHQRRGI*RKKKKI
Trigger: GATCTTTTTCTTCTTCCTTCAGATGCCCCGTCTCTG...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642241.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACGAGGTGCACATCAAATaGCCACAAGGCTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHEVHIK*PQGSIL
Trigger: CAAGATTGAGCCTTGTGGGCATTTGATGTGCACCTC...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCATCCGACTCCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIIRLLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGGAGTCGGAT...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAAAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: DVGILEEGRQILGGCSGQRGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...TTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPCGFLL*ARGEDP
Trigger: AGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACA...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGGAGTGGGTCAGGCTGTaGCTTTCTTCTCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLEWVRL*LSSLGK
Trigger: CTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTC...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RQILGGCSGQLRHYSGLSLRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...AGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCACTCAGTCTATTGTCTaGTGGGATTGGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQATQSIV*WDWWRS
Trigger: AGACCTCCACCAATCCCACCAGACAATAGACTGAGT...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CCACATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGAGGTCGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PHDGCVYSVYCLVGLVEVALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...GACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR CCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGTTCAGGGAAACAGGGTaGGATGAAGGAATCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSFRETG*DEGILY
Trigger: ATACAAGATTCCTTCATCCCACCCTGTTTCCCTGAA...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCTCTGTGGTGAATTTCTaGTGCAGTCCTGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILSVVNF*CSPARS
Trigger: CGACCGCGCAGGACTGCACCAGAAATTCACCACAGA...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCTCTGTGGTGAATTTCTaGTGCAGTCCTGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSSVVNF*CSPARS
Trigger: CGACCGCGCAGGACTGCACCAGAAATTCACCACAGA...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAGTTTCTGCCATTCATTaGGTTTGCCATCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: PELEAWQVVMARDQRLNQVSAIH*VCHLEF
Trigger: AAATTCCAGATGGCAAACTCAATGAATGGCAGAAAC...TTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTGGTCCAACTGCATCCTaGATAGCATCAATAATACCC +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPGPTAS*IASIIP
Trigger: GGGTATTATTGATGCTATTCAGGATGCAGTTGGACC...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCGGTCCAACTGCATCCTaGATAGCATCAATAATACCC +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSGPTAS*IASIIP
Trigger: GGGTATTATTGATGCTATTCAGGATGCAGTTGGACC...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCTTACCACTTTGTCCATaGGCTTCCAAGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSLPLCP*ASKSSP
Trigger: TGGAGAAGACTTGGAAGCTCATGGACAAAGTGGTAA...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNRILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRGTLST*WMCLLS
Trigger: ACTGAGTAGACACATCCATCATGTGGAAAGCGTGCC...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAATCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHESSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCTCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCSSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQAGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTCCATTCAGCATACAGTaGCCATTATCACAAGACCGA +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPPFSIQ*PLSQDR
Trigger: TCGGTCTTGTGATAATGGTCACTGTATGCTGAATGG...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGATCACCTCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: LAGGKGTWPLARSTKGSPQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...AGGTGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCGGAGCCAGGAGGTTTTaGATGTTCAATGAGACTATG +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSGARRF*MFNETM
Trigger: CATAGTCTCATTGAACATTCAAAACCTCCTGGCTCC...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCAAAAAGATCCTGTCCTaGGGATGGCCGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSKKILS*GWPATG
Trigger: TCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTT...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAAAGCAGTGTGGAGCAATaGATGAGAGAATCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHESSVEQ*MRESAN
Trigger: ATTTGCAGATTCTCTCATTCATTGCTCCACACTGCT...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR TCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACATATCATGGTGGGTGTaGAGTGAAAAGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHISWWV*SEKRRH
Trigger: GTGTCTCCTCTTTTCACTTCACACCCACCATGATAT...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp TCCCAAACACATCCCGAGGGCACCATGCTTCAAGAGGCATTGGCGGGTCTCTGGCTTTTTGGATCACAGTaGAACAAAGTCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: SQTHPEGTMLQEALAGLWLFGSQ*NKVWIT
Trigger: AGTGATCCAGACTTTGTTTCACTGTGATCCAAAAAG...CCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGATGTGTTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR TCA 90 bp GACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACCTTTTAAGTTGCAGTaGGGGTTCTATTATGAAGAC +
Preference number: 4 (lower is better)
Translates to: DVGILEEGRQILGGCSGQPFKLQ*GFYYED
Trigger: GTCTTCATAATAGAACCCTCACTGCAACTTAAAAGG...TTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR TCA 90 bp AGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGTGGTTTTACTCTCTTCCTTaGCAAGGTGAAGAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RPMGFSVVNFWCSPARSWFYSLP*QGEEAK
Trigger: CTTTGCTTCTTCACCTTGTCAAGGAAGAGAGTAAAA...CCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR GCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTGACCACCAGGGTTTCTaGCATTCATTGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSDHQGF*HSLSLP
Trigger: TGGCAAACTCAATGAATGGCAGAAACCCTGGTGGTC...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAGACCACCAGGGTTTCTaGCATTCATTGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETDHQGF*HSLSLP
Trigger: TGGCAAACTCAATGAATGGCAGAAACCCTGGTGGTC...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CTGGAGAACCCATTCAAATTTCAGGCAAATTCACAACCCAGTGAGTCTGTGTTACACGGTCCTGCGATCTaGGGCAGCTTGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LENPFKFQANSQPSESVLHGPAI*GSLLRG
Trigger: CCCCCTAAGCAAGCTGCCGCAGATCGCAGGACCGTG...TAACACAGACTCACTGGGTTGTGAATTTGCCTGAAATTTGAATGGGTTCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp GAGAAAGCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATTGGAAATCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: EKAGEEHHILHFQGDHWKSSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...TTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGACTGTCCCAATCGAGTaGAACTTAACCGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSTVPIE*NLTGKY
Trigger: ATATTTTCCGGTTAAGTTGCACTCGATTGGGACAGT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTGAGGTGCACATCAAATaGCCACAAGGCTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSEVHIK*PQGSIL
Trigger: CAAGATTGAGCCTTGTGGGCATTTGATGTGCACCTC...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACGCACTTTCGGACGTTTaGCAACCGATTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHALSDV*QPIHHQ
Trigger: TTGATGATGAATCGGTTGGCAAACGTCCGAAAGTGC...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGG +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSVTGEF*LSVHFR
Trigger: CCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGG +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFVTGEF*LSVHFR
Trigger: CCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACATGTTCAATGAGACTATaGCTTGCAGGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATCSMRL*LAGGGG
Trigger: TCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACA...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATGTTCAATGAGACTATaGCTTGCAGGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLCSMRL*LAGGGG
Trigger: TCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACA...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTATCGACATTTTCCAATaGCGCCTCAGGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSIDIFQ*RLRPMG
Trigger: CCCCATGGGCCTGAGGCGGCATTGGAAAATGTCGAT...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTAATCGACATTTTCCAATaGCGCCTCAGGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLIDIFQ*RLRPMG
Trigger: CCCCATGGGCCTGAGGCGGCATTGGAAAATGTCGAT...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGACAAATTCTCGGAGGATaGTCCGGGCAACTTCGACAT +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRQILGG*SGQLRH
Trigger: ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTACAAATTCTCGGAGGATaGTCCGGGCAACTTCGACAT +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLQILGG*SGQLRH
Trigger: ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTCAAATTCTCGGAGGATaGTCCGGGCAACTTCGACAT +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPQILGG*SGQLRH
Trigger: ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGGAGGAGACCGCTCGCTaGACACCCCACCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RKWNWCSCCKKSKFIFIKEETAR*TPHPCG
Trigger: GCCACAGGGGTGGGGTGTCCAGCGAGCGGTCTCCTC...CTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp TGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCTCATTCTCACTGAGTTaGGCAAGTTTCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WGYWRREGKFSEDAPGNFSFSLS*ASFWLS
Trigger: TGACAACCAGAAACTTGCCCAACTCAGTGAGAATGA...GAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNCGFLL*ARGEDP
Trigger: AGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACA...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTAGAGTGGGTCAGGCTGTaGCTTTCTTCTCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLEWVRL*LSSLGK
Trigger: CTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTC...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSLRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQAIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTAATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCAGTCTATTGTCTGGTaGGATTGGTGGAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSQSIVW*DWWRSF
Trigger: GAAAGACCTCCACCAATCCCACCAGACAATAGACTG...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: LSILVSTVLAAIDLDVGIPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...TATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCAGGATGGCCGGCTACTaGAGCCAGGAGGTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFRMAGY*SQEVLN
Trigger: ATTCAAAACCTCCTGGCTCCAGTAGCCGGCCATCCT...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATAAGTCCTGCGCGGTCGTaGTTTAGGGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSILVSTVLAAIDLDVGISPARS*FRGSGW
Trigger: CCAGCCAGACCCCCTAAACCACGACCGCGCAGGACT...TATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATTCTGTGGTGAATTTCTaGTGCAGTCCTGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHSVVNF*CSPARS
Trigger: CGACCGCGCAGGACTGCACCAGAAATTCACCACAGA...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WGYWRREGKFSEDAPGNFDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...GAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGCAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: GGKANSRRMLRATSTLFWQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGTCAACAAAGGGATCTTaGCAGTCAGAGACGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RREGKFSEDAPGNFDIILSTKGS*QSETGH
Trigger: ATGCCCCGTCTCTGACTGCCAAGATCCCTTTGTTGA...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643322.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACGGTCCAACTGCATCCTaGATAGCATCAATAATACCC +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDGPTAS*IASIIP
Trigger: GGGTATTATTGATGCTATTCAGGATGCAGTTGGACC...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGTTACCACTTTGTCCATaGGCTTCCAAGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRLPLCP*ASKSSP
Trigger: TGGAGAAGACTTGGAAGCTCATGGACAAAGTGGTAA...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp CCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAATCTTATTGCCCGTTTTaGCTTTTTCATAAGGCTATC +
Preference number: 4 (lower is better)
Translates to: PELEAWQVVMARDQRLNQSYCPF*LFHKAI
Trigger: GATAGCCTTATGAAAAAGTCAAAACGGGCAATAAGA...TTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp GTCCTGTTGAGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCACATGAAGGCACTGTCTaGATACTTTCCATGGTACGA +
Preference number: 4 (lower is better)
Translates to: VLLSEEPCFGLSRVGGLAHEGTV*ILSMVR
Trigger: TCGTACCATGGAAAGTATTCAGACAGTGCCTTCATG...TGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCATGAAGGCACTGTCTaGATACTTTCCATGGTACGA +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSHEGTV*ILSMVR
Trigger: TCGTACCATGGAAAGTATTCAGACAGTGCCTTCATG...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAATCTTACAGAGCTaGAAAGTGGAGCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSQILQS*KVEPIS
Trigger: TGAAATGGGCTCCACTTTTCAGCTCTGTAAGATTTG...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHRILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSRILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTAACTATGCCTTTCTaGATTAGATCCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSLTMPF*IRSRRG
Trigger: TCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAG...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLGTLST*WMCLLS
Trigger: ACTGAGTAGACACATCCATCATGTGGAAAGCGTGCC...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: RQILGGCSGQLRHYSGLSGTLST*WMCLLS
Trigger: ACTGAGTAGACACATCCATCATGTGGAAAGCGTGCC...AGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGATCTTGGCAGTCAGAGCGACATCCCACAAGCTaGTTAGTCCCAAACACATCC +
Preference number: 4 (lower is better)
Translates to: GKGTWPLARSTKGSWQSERHPTS*LVPNTS
Trigger: GGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCG...CTCTGACTGCCAAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643322.1
ENST00000646499.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQASSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAAGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: ELEAWQVVMARDQRLNQKGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...TTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCCATTCAGCATACAGTaGCCATTATCACAAGACCGA +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSPFSIQ*PLSQDR
Trigger: TCGGTCTTGTGATAATGGTCACTGTATGCTGAATGG...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATCCATTCAGCATACAGTaGCCATTATCACAAGACCGA +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHPFSIQ*PLSQDR
Trigger: TCGGTCTTGTGATAATGGTCACTGTATGCTGAATGG...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: AAIDLDVGILEEGRQILGGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTCAGAGGGCGTCCTGTTaGGTGAAGAACCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSQRASC*VKNHAL
Trigger: CAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTG...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGACACGGGATCAGAGGCTaGATCAAAAACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRHGIRG*IKNISL
Trigger: AAGGGAGATGTTTTTGATTCAGCCTCTGATCCCGTG...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAGGAGCCAGGAGGTTTTaGATGTTCAATGAGACTATG +
Preference number: 4 (lower is better)
Translates to: LRSCTPKPLLKLLHEEETGARRF*MFNETM
Trigger: CATAGTCTCATTGAACATTCAAAACCTCCTGGCTCC...TGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATGGGGTTTTCTGTGGTaGATTTCTGGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: AAIDLDVGILEEGRQILGWGFLW*ISGAVL
Trigger: CAGGACTGCACCAGAAATTCACCACAGAAAACCCCA...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GAGAAAGCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATTGGAAAAGCATCGGTCTCCTTTaGGAAGCTGCACTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: EKAGEEHHILHFQGDHWKSIGLL*EAALPS
Trigger: GCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCT...TTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQAKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGCACCTAATGGAGGGATaGGAAGATCATAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: GGKANSRRMLRATSTLFWHLMEG*EDHNQR
Trigger: CCTCTGATTATGATCTTCTCATCCCTCCATTAGGTG...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAATTACCCAAGGCCTGTaGGTCCTCATCTCATACCAT +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATITQGL*VLISYH
Trigger: ATGGTATGAGATGAGGACTCACAGGCCTTGGGTAAT...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp CACTTTGCAAAGGAATGTATTAACTCCTCTCCCAGGGTCAACTTAGTCTACGTGCAGAAAGGGCAGCCCTaGCCATCCGACTCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: HFAKECINSSPRVNLVYVQKGQP*PSDSLL
Trigger: TAGCAAGGAGTCGGATGGTCAGGGCTGCCCTTTCTG...CACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR GCA 90 bp AGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTACCAGAGACACGCGTGTaGGCGGGTCCCACTCCACAC +
Preference number: 4 (lower is better)
Translates to: SVSGTGAHAARKASSYLLPETRV*AGPTPH
Trigger: GTGTGGAGTGGGACCCGCGCACACGCGTGTCTCTGG...TAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGTCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SILVSTVLAAIDLDVGILSSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGTCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILESSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGAGAATTCAGCAGCATCTaGTTTTGTGATACGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PCFGLSRVGGLAGGNGTGEFSSI*FCDTKV
Trigger: AACTTTCGTATCACAAAAGCAGATGCTGCTGAATTC...TCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp ACATTTGAACTCGCTGTGATTCCAGGTTTTGGAGAGCCCTCCCCTAGGAGTCGAGAGGTGCACATCAAATaGCCACAAGGCTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: TFELAVIPGFGEPSPRSREVHIK*PQGSIL
Trigger: CAAGATTGAGCCTTGTGGGCATTTGATGTGCACCTC...TCGACTCCTAGGGGAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGG +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHVTGEF*LSVHFR
Trigger: CCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCCTTGTTTTCTCACCATaGAAGGAGAAGACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQALVFSP*KEKTLV
Trigger: CACCAAAGTCTTCTCCTTGCATGGTGAGAAAACAAG...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILEIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: SILVSTVLAAIDLDVGILIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAAGAGCCCACTCTACTGTaGCTTCCATTGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: ELEAWQVVMARDQRLNQKEPTLL*LPLTFE
Trigger: TTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTC...TTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp GTCCTGTTGAGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCATGGAACTGGTGCTCATaGTGCAAGAAAAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLLSEEPCFGLSRVGGLAWNWCS*CKKSKF
Trigger: GAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCA...TGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR GCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGTTCAATGAGACTATaGCTTGCAGGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLCSMRL*LAGGGG
Trigger: TCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACA...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CACTTTGCAAAGGAATGTATTAACTCCTCTCCCAGGGTCAACTTAGTCTACGTGGTGGTGAATTTCTGGTaGAGTCCTGCGCGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: HFAKECINSSPRVNLVYVVVNFW*SPARSW
Trigger: CCACGACCGCGCAGGACTGCACCAGAAATTCACCAC...CACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR GCA 90 bp AAAGGGATCTTGGCAGTCAGAGACGGGGCATCTGCTTATGGTTCTGTTTTGAATATCGACATTTTCCAATaGCGCCTCAGGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: KGILAVRDGASAYGSVLNIDIFQ*RLRPMG
Trigger: CCCCATGGGCCTGAGGCGGCATTGGAAAATGTCGAT...ATTCAAAACAGAACCATAAGCAGATGCCCCGTCTCTGACTGCCAAGATCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643322.1
CDS-3UTR GCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAATTCTCGGAGGATaGTCCGGGCAACTTCGACAT +
Preference number: 4 (lower is better)
Translates to: MWTARELVGNVTADLTTLQILGG*SGQLRH
Trigger: ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGTCTACAGTTCTGGCTaGTATAGATTTAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: GGKANSRRMLRATSTLFWVYSSG*YRFRRG
Trigger: CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGAC...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAAGCTTTAAAAACACAGTaGCTAACAGCACCAAGCATA +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHEALKTQ*LTAPSI
Trigger: TATGCTTGGTGCTGTTAGGCACTGTGTTTTTAAAGC...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR CCA 90 bp CTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGCGGTCGAGTTGGGCAAGTTTCTaGTTGTCATCATATTTACTC +
Preference number: 4 (lower is better)
Translates to: LRPMGFSVVNFWCSPARSSWASF*LSSYLL
Trigger: GAGTAAATATGATGACAACCAGAAACTTGCCCAACT...CGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTCATTCTCACTGAGTTaGGCAAGTTTCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQASFSLS*ASFWLS
Trigger: TGACAACCAGAAACTTGCCCAACTCAGTGAGAATGA...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQARGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSRGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPRGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGTGCACTTTCGGACGTTTGCCAACCGATTCATCATCAAGGACTCCTCACGATCGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: SALSDVCQPIHHQGLLTIGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...GATCGTGAGGAGTCCTTGATGATGAATCGGTTGGCAAACGTCCGAAAGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR CCA 90 bp GTCCTGTTGAGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAAGGTGGTGCTGGGAGTaGTTTATCTTGTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VLLSEEPCFGLSRVGGLARWCWE*FILFSH
Trigger: GTGAGAAAACAAGATAAACCACTCCCAGCACCACCT...TGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR CCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATAGGTGGTGCTGGGAGTaGTTTATCTTGTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHRWCWE*FILFSH
Trigger: GTGAGAAAACAAGATAAACCACTCCCAGCACCACCT...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAACTCAGTCTATTGTCTaGTGGGATTGGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRTQSIV*WDWWRS
Trigger: AGACCTCCACCAATCCCACCAGACAATAGACTGAGT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTGCCTGTGAACCATCTGAACATGAAGGAAGCTGATCATAGTCCTGTGATGTTCGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: VPVNHLNMKEADHSPVMFALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...GAACATCACAGGACTATGATCAGCTTCCTTCATGTTCAGATGGTTCACAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTGCCTGTGAACCATCTGAACATGAAGGAAGCTGATCATAGTCCTGTGATGTTCTGCTTCAAGAGGCATTaGCGGGTCTCTGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VPVNHLNMKEADHSPVMFCFKRH*RVSGRH
Trigger: GTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCA...GAACATCACAGGACTATGATCAGCTTCCTTCATGTTCAGATGGTTCACAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCTCTAAAGGCAAATCATaGCGTCTGTGTTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSSKGKS*RLCFRI
Trigger: TATGCGGAAACACAGACGCCATGATTTGCCTTTAGA...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTGGAGTCACCGGCACCTaGAGAACCCATTCAAATTTC +
Preference number: 4 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGGVTGT*RTHSNF
Trigger: GAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCC...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR CCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTAGGATGGCCGGCTACTaGAGCCAGGAGGTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSRMAGY*SQEVLN
Trigger: ATTCAAAACCTCCTGGCTCCAGTAGCCGGCCATCCT...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTAAGGATGGCCGGCTACTaGAGCCAGGAGGTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLRMAGY*SQEVLN
Trigger: ATTCAAAACCTCCTGGCTCCAGTAGCCGGCCATCCT...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACAGTCCTGCGCGGTCGTaGTTTAGGGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRLLSILVSTVLAAIDLDSPARS*FRGSGW
Trigger: CCAGCCAGACCCCCTAAACCACGACCGCGCAGGACT...GTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQADCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGCAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGAAATGGAACTGGACCTaGGCAAGGCATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: LVSTVLAAIDLDVGILEEKWNWT*ARHGDG
Trigger: ACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTT...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATCAACAAAGGGATCTTaGCAGTCAGAGACGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AAIDLDVGILEEGRQILGSTKGS*QSETGH
Trigger: ATGCCCCGTCTCTGACTGCCAAGATCCCTTTGTTGA...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643322.1
ENST00000646499.1
ENST00000646825.1
3UTR CAA 72 bp AGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATaGACATTTGAACTCGCTGTGATTCCAGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: STGSEPTLLCLP*TFELAVIPGFG
Trigger: TCCAAAACCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCGTTTCTGCCATTCATTaGGTTTGCCATCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPVSAIH*VCHLEF
Trigger: AAATTCCAGATGGCAAACTCAATGAATGGCAGAAAC...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGGTCCAACTGCATCCTaGATAGCATCAATAATACCC +
Preference number: 4 (lower is better)
Translates to: WSRELGSHRHLENPFKFQGPTAS*IASIIP
Trigger: GGGTATTATTGATGCTATTCAGGATGCAGTTGGACC...CTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp TGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGAGTACTCATTCTCACTaGGTTGGGCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WSRELGSHRHLENPFKFQSTHSH*VGQVSG
Trigger: ACCAGAAACTTGCCCAACTCAGTGAGAATGAGTACT...CTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAGTACTCATTCTCACTaGGTTGGGCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATSTHSH*VGQVSG
Trigger: ACCAGAAACTTGCCCAACTCAGTGAGAATGAGTACT...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTACATGAAGGCACTGTCTaGATACTTTCCATGGTACGA +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLHEGTV*ILSMVR
Trigger: TCGTACCATGGAAAGTATTCAGACAGTGCCTTCATG...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAATCTGGTGGACCTCATaGAGGCACTGTCTGAATACT +
Preference number: 4 (lower is better)
Translates to: MWTARELVGNVTADLTTLIWWTS*RHCLNT
Trigger: AGTATTCAGACAGTGCCTTCATGAGGTCCACCAGAT...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGATCTGGTGGACCTCATaGAGGCACTGTCTGAATACT +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLIWWTS*RHCLNT
Trigger: AGTATTCAGACAGTGCCTTCATGAGGTCCACCAGAT...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAATAGAGCCCCAAGGCTaGAACAGCCTGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRIEPQG*NSLVKI
Trigger: TATTTTTACCAGGCTGTTTCAGCCTTGGGGCTCTAT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGATAGAGCCCCAAGGCTaGAACAGCCTGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: RREGKFSEDAPGNFDIILIEPQG*NSLVKI
Trigger: TATTTTTACCAGGCTGTTTCAGCCTTGGGGCTCTAT...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATAGAGCCCCAAGGCTaGAACAGCCTGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRIEPQG*NSLVKI
Trigger: TATTTTTACCAGGCTGTTTCAGCCTTGGGGCTCTAT...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGTGCCAAAGGGGTCAATaGTGCTGCAACACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SILVSTVLAAIDLDVGILCQRGQ*CCNTWS
Trigger: GCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCA...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGCTAACTATGCCTTTCTaGATTAGATCCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRLTMPF*IRSRRG
Trigger: TCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAG...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSGTLST*WMCLLS
Trigger: ACTGAGTAGACACATCCATCATGTGGAAAGCGTGCC...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAGGCACGCTTTCCACATaGTGGATGTGTCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGGTLST*WMCLLS
Trigger: ACTGAGTAGACACATCCATCATGTGGAAAGCGTGCC...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643322.1
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp GAGCCTTCATCTCTTGGATCAAAGGGGTCCACGATTATGGGCTCAGTTCCTTTTCGACATCCCACAAGCTaGTTAGTCCCAAACACATCC +
Preference number: 4 (lower is better)
Translates to: EPSSLGSKGSTIMGSVPFRHPTS*LVPNTS
Trigger: GGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCG...AAAAGGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCCATTTGAACTCGCTGTaGTTCCAGGTTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSHLNSL*FQVLES
Trigger: GCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATG...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGCATTTGAACTCGCTGTaGTTCCAGGTTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLHLNSL*FQVLES
Trigger: GCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATG...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCCCTTCCATTGACATTTaGACTCGCTGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSPSIDI*TRCDSR
Trigger: CCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGG...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAATCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: ELEAWQVVMARDQRLNQKSSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...TTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGCCATTCAGCATACAGTaGCCATTATCACAAGACCGA +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRPFSIQ*PLSQDR
Trigger: TCGGTCTTGTGATAATGGTCACTGTATGCTGAATGG...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000646499.1
CDS-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTAACCTAATGGAGGGATaGGAAGATCATAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSNLMEG*EDHNQR
Trigger: CCTCTGATTATGATCTTCTCATCCCTCCATTAGGTT...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR TCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGCACGGGATCAGAGGCTaGATCAAAAACATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLHGIRG*IKNISL
Trigger: AAGGGAGATGTTTTTGATTCAGCCTCTGATCCCGTG...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCCTGATCATAGTCCTGTaGTGTTCTGTTAGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQALIIVL*CSVSFD
Trigger: GTCAAAACTAACAGAACATCACAGGACTATGATCAG...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCCATAACCCTCTCCCATaGGTTTTGCAATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQAHNPLP*VLQFLH
Trigger: ATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATG...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CGCGGTCGTGGTTTAGGGGGTCTGGCTGGTGCCTGTGAACCATCTGAACATGAATTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RGRGLGGLAGACEPSEHELSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...TTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGCTCCTCTATGTTATGTaGAAACCCCTTACAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GGKANSRRMLRATSTLFWLLYVM*KPLTKG
Trigger: GCCTTTTGTAAGGGGTTTTCACATAACATAGAGGAG...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR TCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGATTTTTACAGTTGTaGCACCCCTGGGATGACAGA +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRRFLQL*HPWDDR
Trigger: TCTGTCATCCCAGGGGTGTCACAACTGTAAAAATCT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGGTTTCCACTGCAATATaGACTGGTTCCCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLVSTAI*TGSHSS
Trigger: AGAGCTGTGGGAACCAGTTCATATTGCAGTGGAAAC...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAGCAGTGTGGAGCAATaGATGAGAGAATCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDSSVEQ*MRESAN
Trigger: ATTTGCAGATTCTCTCATTCATTGCTCCACACTGCT...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGGCAGGCTCACTCTCTaGTGCATCTTTTTATATCAT +
Preference number: 4 (lower is better)
Translates to: GGKANSRRMLRATSTLFWGRLTL*CIFLYH
Trigger: ATGATATAAAAAGATGCATCAGAGAGTGAGCCTGCC...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCACAATGTTATCACAATaGAGTGGCAACTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSTMLSQ*SGNFWP
Trigger: AGGCCAAAAGTTGCCACTTCATTGTGATAACATTGT...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCCAGAGACGGGGCATCTaGAGGAAGAAGAAAAAGATC +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILQRRGI*RKKKKI
Trigger: GATCTTTTTCTTCTTCCTTCAGATGCCCCGTCTCTG...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642241.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCCAGAGACGGGGCATCTaGAGGAAGAAGAAAAAGATC +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSQRRGI*RKKKKI
Trigger: GATCTTTTTCTTCTTCCTTCAGATGCCCCGTCTCTG...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642241.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTTCTGTTAGTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGACGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: VLLVLTFSPGNLLAGGKGRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...TCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAACTAACAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATATCTTCTCCACGGTCCTaGGATCTGCGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LSILVSTVLAAIDLDVGISSPRS*DLRQLA
Trigger: AGCAAGCTGCCGCAGATCGCAGGACCGTGGAGAAGA...TATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCGAATTCAGCAGCATCTaGTTTTGTGATACGAAAGTT +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCEFSSI*FCDTKV
Trigger: AACTTTCGTATCACAAAAGCAGATGCTGCTGAATTC...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGAGGTCTTTGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGG +
Preference number: 4 (lower is better)
Translates to: HDGCVYSVYCLVGLVEVFVTGEF*LSVHFR
Trigger: CCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC...AAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATCTTGTTTTCTCACCATaGAAGGAGAAGACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHLVFSP*KEKTLV
Trigger: CACCAAAGTCTTCTCCTTGCATGGTGAGAAAACAAG...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ACTTGGCCACTTGCTAGATCAACAAAGGGATCTTGGCAGTCAGAGACGGGGCATGAGCCCACTCTACTGTaGCTTCCATTGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: TWPLARSTKGSWQSETGHEPTLL*LPLTFE
Trigger: TTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTC...ATGCCCCGTCTCTGACTGCCAAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643322.1
ENST00000646499.1
CDS-3UTR GCA 90 bp CCCGAGTTGGAGGCCTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAACTCCCTTTAAATATATaGTTAAGTCAGGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: PELEAWQVVMARDQRLNQLPLNI*LSQGCL
Trigger: CAAACATCCCTGACTTAAGCATATATTTAAAGGGAG...TTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646499.1
CDS-3UTR GCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGTGTTCAATGAGACTATaGCTTGCAGGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LVSTVLAAIDLDVGILEECSMRL*LAGGGG
Trigger: TCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACA...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATATCGACATTTTCCAATaGCGCCTCAGGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: AFHFGVYSSGCYRFRRGDIDIFQ*RLRPMG
Trigger: CCCCATGGGCCTGAGGCGGCATTGGAAAATGTCGAT...ATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTGGGAGAGATGGAGGGAGGGCATCAAAAGCATCTTCACCTTAATCATCTACATAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: VGEMEGGHQKHLHLNHLHSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...ATGTAGATGATTAAGGTGAAGATGCTTTTGATGCCCTCCCTCCATCTCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR GCA 90 bp ACCATGTGTTCCATTCAGCATACAGTGACCATTATCACAAGACCGAACAGGAGGAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: TMCSIQHTVTIITRPNRRSLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...CCTCCTGTTCGGTCTTGTGATAATGGTCACTGTATGCTGAATGGAACACATGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp CGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: RGDTGGGKANSRRMLRATNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...AGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACGCTTTAAAAACACAGTaGCTAACAGCACCAAGCATA +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHALKTQ*LTAPSI
Trigger: TATGCTTGGTGCTGTTAGGCACTGTGTTTTTAAAGC...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR GCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCGGAGACACAGAAATATaGACAAACCCACAATTAGTC +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFGDTEI*TNPQLV
Trigger: GACTAATTGTGGGTTTGTGCATATTTCTGTGTCTCC...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR GCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACCTATTGAGTACAAGATaGAGAGATTTTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDLLSTR*RDFAGG
Trigger: GCCTCCAGCAAAATCTCTGCATCTTGTACTCAATAG...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGTCATTCTCACTGAGTTaGGCAAGTTTCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRSFSLS*ASFWLS
Trigger: TGACAACCAGAAACTTGCCCAACTCAGTGAGAATGA...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACTCATTCTCACTGAGTTaGGCAAGTTTCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDSFSLS*ASFWLS
Trigger: TGACAACCAGAAACTTGCCCAACTCAGTGAGAATGA...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTTATAGCTTCCGGGTTTaGTGCTATATTTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPYSFRV*CYISVV
Trigger: GACTACAGAAATATAGCACCAAACCCGGAAGCTATA...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: GLVNLGVTGTWRTHSNFRRGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...CCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILELRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SILVSTVLAAIDLDVGILLRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTAATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCCAGTCTATTGTCTGGTaGGATTGGTGGAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSQSIVW*DWWRSF
Trigger: GAAAGACCTCCACCAATCCCACCAGACAATAGACTG...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGATCTTGGCAGTCAGAGACTCAGTCTATTGTCTaGTGGGATTGGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GKGTWPLARSTKGSWQSETQSIV*WDWWRS
Trigger: AGACCTCCACCAATCCCACCAGACAATAGACTGAGT...CTCTGACTGCCAAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643322.1
ENST00000646499.1
CDS-3UTR CCA 90 bp CACTTTGCAAAGGAATGTATTAACTCCTCTCCCAGGGTCAACTTAGTCTACGTGTGCTTCAAGAGGCATTaGCGGGTCTCTGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: HFAKECINSSPRVNLVYVCFKRH*RVSGRH
Trigger: GTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCA...CACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp GCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATTGCTTCAAGAGGCATTaGCGGGTCTCTGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: AFHFGVYSSGCYRFRRGDCFKRH*RVSGRH
Trigger: GTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCA...ATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACTTCAGGGAAACAGGGTaGGATGAAGGAATCTTGTAT +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDFRETG*DEGILY
Trigger: ATACAAGATTCCTTCATCCCACCCTGTTTCCCTGAA...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGCCCGAGTTGGAGGCCTaGCAGGTGGTAATGGCACGG +
Preference number: 4 (lower is better)
Translates to: RKWNWCSCCKKSKFIFIKPELEA*QVVMAR
Trigger: CCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGG...CTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp CCTCAAAGTAATGCAGGCATAAGTATCAGGGGACCTTGTTATATAACTTCAGTAAGTCCTGCGCGGTCGTaGTTTAGGGGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PQSNAGISIRGPCYITSVSPARS*FRGSGW
Trigger: CCAGCCAGACCCCCTAAACCACGACCGCGCAGGACT...TACTGAAGTTATATAACAAGGTCCCCTGATACTTATGCCTGCATTACTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp ACATTTGAACTCGCTGTGATTCCAGGTTTTGGAGAGCCCTCCCCTAGGAGTCGACACTGCAATATGAACTaGTTCCCACAGCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: TFELAVIPGFGEPSPRSRHCNMN*FPQLLG
Trigger: TCCTAAGAGCTGTGGGAACCAGTTCATATTGCAGTG...TCGACTCCTAGGGGAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR CCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTATGCAGAGATTTTGCTaGAGGCTGGTAAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPMQRFC*RLVNFL
Trigger: GAGAAAATTTACCAGCCTCCAGCAAAATCTCTGCAT...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACATGCAGAGATTTTGCTaGAGGCTGGTAAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHMQRFC*RLVNFL
Trigger: GAGAAAATTTACCAGCCTCCAGCAAAATCTCTGCAT...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCAGACTATTTGCAATGTaGGCAAAAGGGAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFRLFAM*AKGKQR
Trigger: TCTCTGTTTCCCTTTTGCCCACATTGCAAATAGTCT...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp TTAATTAGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTGGGAGTGGGATCGCTaGGAACAGCTCGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: LISVSGTGAHAARKASSYWEWDR*EQLAPE
Trigger: TTCGGGAGCGAGCTGTTCTCAGCGATCCCACTCCCA...ATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCTAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCGGTCCAACTGCATCCTaGATAGCATCAATAATACCC +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIGPTAS*IASIIP
Trigger: GGGTATTATTGATGCTATTCAGGATGCAGTTGGACC...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAAGTACTCATTCTCACTaGGTTGGGCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: MWTARELVGNVTADLTTLSTHSH*VGQVSG
Trigger: ACCAGAAACTTGCCCAACTCAGTGAGAATGAGTACT...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTTCTTATTGCCCGTTTTaGCTTTTTCATAAGGCTATC +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPSYCPF*LFHKAI
Trigger: GATAGCCTTATGAAAAAGTCAAAACGGGCAATAAGA...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTCTTATTGCCCGTTTTaGCTTTTTCATAAGGCTATC +
Preference number: 4 (lower is better)
Translates to: CRHPEQASVSFEKLHSQASYCPF*LFHKAI
Trigger: GATAGCCTTATGAAAAAGTCAAAACGGGCAATAAGA...GGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATCATGAAGGCACTGTCTaGATACTTTCCATGGTACGA +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNHEGTV*ILSMVR
Trigger: TCGTACCATGGAAAGTATTCAGACAGTGCCTTCATG...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAATCTGGTGGACCTCATaGAGGCACTGTCTGAATACT +
Preference number: 4 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGIWWTS*RHCLNT
Trigger: AGTATTCAGACAGTGCCTTCATGAGGTCCACCAGAT...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643322.1
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATATAGAGCCCCAAGGCTaGAACAGCCTGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNIEPQG*NSLVKI
Trigger: TATTTTTACCAGGCTGTTTCAGCCTTGGGGCTCTAT...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCAATAAGGGCTTGTTATaGGGTATGGTCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSNKGLL*GMVCKI
Trigger: TATCTTACAGACCATACCTCATAACAAGCCCTTATT...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAATAAGGGCTTGTTATaGGGTATGGTCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: TAVDILSKHRSPLRSCTPNKGLL*GMVCKI
Trigger: TATCTTACAGACCATACCTCATAACAAGCCCTTATT...GGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACAATAAGGGCTTGTTATaGGGTATGGTCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: SHSCRHPEQASVSFEKLHNKGLL*GMVCKI
Trigger: TATCTTACAGACCATACCTCATAACAAGCCCTTATT...GTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTCAAATCTTACAGAGCTaGAAAGTGGAGCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPQILQS*KVEPIS
Trigger: TGAAATGGGCTCCACTTTTCAGCTCTGTAAGATTTG...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCACAAATCTTACAGAGCTaGAAAGTGGAGCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQAQILQS*KVEPIS
Trigger: TGAAATGGGCTCCACTTTTCAGCTCTGTAAGATTTG...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILERILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGCTAACTATGCCTTTCTaGATTAGATCCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLLTMPF*IRSRRG
Trigger: TCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAG...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGAGGAGAAGACTTTGGTaGACCCGTTGGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RLLSILVSTVLAAIDLDVRRRLW*TRWAAT
Trigger: TGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCT...CACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCTCCTAGAGGATCATTTGAACTCGCTGTaGTTCCAGGTTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QVVMARDQRLNQKHLLEDHLNSL*FQVLES
Trigger: GCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATG...ATCCTCTAGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR TCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTACATTTGAACTCGCTGTaGTTCCAGGTTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLHLNSL*FQVLES
Trigger: GCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATG...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGTCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRSSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
CDS-3UTR TCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCGTTTTGAATGTTCAATaGGACTATGCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLVLNVQ*DYALQE
Trigger: CTCCTGCAAGGCATAGTCTCATTGAACATTCAAAAC...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGTTTTGAATGTTCAATaGGACTATGCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RREGKFSEDAPGNFDIILVLNVQ*DYALQE
Trigger: CTCCTGCAAGGCATAGTCTCATTGAACATTCAAAAC...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTGGAGCCAGGAGGTTTTaGATGTTCAATGAGACTATG +
Preference number: 4 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGGARRF*MFNETM
Trigger: CATAGTCTCATTGAACATTCAAAACCTCCTGGCTCC...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGTGCACTTTCGGACGTTTGCCAACCGATTCATCATCAAGGACTCCTCACGATCGGAGCCAGGAGGTTTTaGATGTTCAATGAGACTATG +
Preference number: 4 (lower is better)
Translates to: SALSDVCQPIHHQGLLTIGARRF*MFNETM
Trigger: CATAGTCTCATTGAACATTCAAAACCTCCTGGCTCC...GATCGTGAGGAGTCCTTGATGATGAATCGGTTGGCAAACGTCCGAAAGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGCCAGGAGGTTTTaGATGTTCAATGAGACTATG +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILGARRF*MFNETM
Trigger: CATAGTCTCATTGAACATTCAAAACCTCCTGGCTCC...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGAAAAAGATCCTGTCCTaGGGATGGCCGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILEKKILS*GWPATG
Trigger: TCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTT...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAAACATGGGGTTTTCTGTGGTaGATTTCTGGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DLTTLQRVCEEHSTGIKTWGFLW*ISGAVL
Trigger: CAGGACTGCACCAGAAATTCACCACAGAAAACCCCA...TGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACCATAACCCTCTCCCATaGGTTTTGCAATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDHNPLP*VLQFLH
Trigger: ATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATG...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGCAGCTGTCGACATCCTaGGCAAGCATCGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLLSILVSTVLAAIDLDVQLSTS*ASIGLL
Trigger: AAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTG...CACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTAGTTTCCACTGCAATATaGACTGGTTCCCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLVSTAI*TGSHSS
Trigger: AGAGCTGTGGGAACCAGTTCATATTGCAGTGGAAAC...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR TCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATATCATGGTGGGTGTaGAGTGAAAAGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGISWWV*SEKRRH
Trigger: GTGTCTCCTCTTTTCACTTCACACCCACCATGATAT...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTACAGAGAGGGAAGAGCTaGAGGTTGTATTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLQRGKS*RLYLWK
Trigger: CTTCCACAAATACAACCTTCAGCTCTTCCCTCTCTG...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR GCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATGACCACCAGGGTTTCTaGCATTCATTGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHDHQGF*HSLSLP
Trigger: TGGCAAACTCAATGAATGGCAGAAACCCTGGTGGTC...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTCGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: SIAFHFGVYSSGCYRFRRRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...ACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGACTGTCCCAATCGAGTaGAACTTAACCGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: GGKANSRRMLRATSTLFWTVPIE*NLTGKY
Trigger: ATATTTTCCGGTTAAGTTGCACTCGATTGGGACAGT...CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCTCCTAGAGGATGAGGTGCACATCAAATaGCCACAAGGCTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: QVVMARDQRLNQKHLLEDEVHIK*PQGSIL
Trigger: CAAGATTGAGCCTTGTGGGCATTTGATGTGCACCTC...ATCCTCTAGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR GCA 90 bp GATGCCCAACTACTACACTACTACCTTAATCATCTACATGGAGTAATGGTCTCGATCCGACTCCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: DAQLLHYYLNHLHGVMVSIRLLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGGAGTCGGAT...CGAGACCATTACTCCATGTAGATGATTAAGGTAGTAGTGTAGTAGTTGGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp CTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGCACTTTCGGACGTTTaGCAACCGATTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: LAAIDLDVGILEEGRQILALSDV*QPIHHQ
Trigger: TTGATGATGAATCGGTTGGCAAACGTCCGAAAGTGC...GAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTGCACTTTCGGACGTTTaGCAACCGATTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: RQILGGCSGQLRHYSGLSALSDV*QPIHHQ
Trigger: TTGATGATGAATCGGTTGGCAAACGTCCGAAAGTGC...AGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGG +
Preference number: 4 (lower is better)
Translates to: SILVSTVLAAIDLDVGILVTGEF*LSVHFR
Trigger: CCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCGAGCCCACTCTACTGTaGCTTCCATTGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFEPTLL*LPLTFE
Trigger: TTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTC...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCATTGAGTGAAGAACCATaGTTTGGATTGTCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQALSEEP*FGLSRV
Trigger: AACTCGGGACAATCCAAAGCATGGTTCTTCACTCAA...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
CDS-3UTR GCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCTTGAGTGAAGAACCATaGTTTGGATTGTCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLLSEEP*FGLSRV
Trigger: AACTCGGGACAATCCAAAGCATGGTTCTTCACTCAA...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAAACATGTTCAATGAGACTATaGCTTGCAGGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: DLTTLQRVCEEHSTGIKTCSMRL*LAGGGG
Trigger: TCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACA...TGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGGTCTACAGTTCTGGCTaGTATAGATTTAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLVYSSG*YRFRRG
Trigger: CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGAC...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTTTTCAGGTCCAGGTTTaGTATATCATCACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSFQVQV*YIITSP
Trigger: AGGACTAGTGATGATATAGCAAACCTGGACCTGAAA...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTCATTCTCACTGAGTTaGGCAAGTTTCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPSFSLS*ASFWLS
Trigger: TGACAACCAGAAACTTGCCCAACTCAGTGAGAATGA...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTTCTGAATACTTTCCATaGTACGATAGTTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPSEYFP*YDSFVS
Trigger: GGAGACAAAACTATCGTACCATGGAAAGTATTCAGA...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTTATAGCTTCCGGGTTTaGTGCTATATTTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSYSFRV*CYISVV
Trigger: GACTACAGAAATATAGCACCAAACCCGGAAGCTATA...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: SEEPCFGLSRVGGLAGGNRGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...ATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR CCA 90 bp AACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: NKEATAVDILSKHRSPLRRGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...TCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTAAGGGGTCCACGATTATaGGCTCAGTTCCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLRGPRL*AQFLLF
Trigger: AAATAAAAGGAACTGAGCCCATAATCGTGGACCCCT...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCAGGAGCCTTCATCTCTTaGATCAAAGGGGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: VLTFSPGNLLAGGKGTWPGAFIS*IKGVHD
Trigger: ATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCC...TGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTTCTGTTAGTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAGAGTGGGTCAGGCTGTaGCTTTCTTCTCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLLVLTFSPGNLLAGGKGEWVRL*LSSLGK
Trigger: CTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTC...TCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAACTAACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGCTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLLSILVSTVLAAIDLDVLRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...CACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATAGGTGGTGCTGGGAGTaGTTTATCTTGTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNRWCWE*FILFSH
Trigger: GTGAGAAAACAAGATAAACCACTCCCAGCACCACCT...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCAGGTGGTGCTGGGAGTaGTTTATCTTGTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSRWCWE*FILFSH
Trigger: GTGAGAAAACAAGATAAACCACTCCCAGCACCACCT...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATCAGTCTATTGTCTGGTaGGATTGGTGGAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHQSIVW*DWWRSF
Trigger: GAAAGACCTCCACCAATCCCACCAGACAATAGACTG...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCTCCTAGAGGATACTCAGTCTATTGTCTaGTGGGATTGGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QVVMARDQRLNQKHLLEDTQSIV*WDWWRS
Trigger: AGACCTCCACCAATCCCACCAGACAATAGACTGAGT...ATCCTCTAGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR CCA 90 bp GATGCCCAACTACTACACTACTACCTTAATCATCTACATGGAGTAATGGTCTCGTGCTTCAAGAGGCATTaGCGGGTCTCTGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: DAQLLHYYLNHLHGVMVSCFKRH*RVSGRH
Trigger: GTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCA...CGAGACCATTACTCCATGTAGATGATTAAGGTAGTAGTGTAGTAGTTGGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGTCTAAAGGCAAATCATaGCGTCTGTGTTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRSKGKS*RLCFRI
Trigger: TATGCGGAAACACAGACGCCATGATTTGCCTTTAGA...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACATCTAAAGGCAAATCATaGCGTCTGTGTTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATSKGKS*RLCFRI
Trigger: TATGCGGAAACACAGACGCCATGATTTGCCTTTAGA...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTAGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ATGCCGCCTCAGGCCCATGGGGTTTTCTGTGGTGAATTTCTGGTGCAGTCCTGCTTAGAAAACTTTCTGTaGGTTCAAGCATTTACACAG +
Preference number: 4 (lower is better)
Translates to: MPPQAHGVFCGEFLVQSCLENFL*VQAFTQ
Trigger: CTGTGTAAATGCTTGAACCCACAGAAAGTTTTCTAA...GCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR CCA 90 bp GCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACAAAGGGATCACCTTaGCAGTCAGAGACGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AFHFGVYSSGCYRFRRGDTKGSP*QSETGH
Trigger: ATGCCCCGTCTCTGACTGCCAAGGTGATCCCTTTGT...ATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642241.1
ENST00000645425.1
CDS-3UTR TCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAGTTTCTGCCATTCATTaGGTTTGCCATCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATVSAIH*VCHLEF
Trigger: AAATTCCAGATGGCAAACTCAATGAATGGCAGAAAC...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATAGTACTCATTCTCACTaGGTTGGGCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHSTHSH*VGQVSG
Trigger: ACCAGAAACTTGCCCAACTCAGTGAGAATGAGTACT...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GAGCCTTCATCTCTTGGATCAAAGGGGTCCACGATTATGGGCTCAGTTCCTTTTAGTACTCATTCTCACTaGGTTGGGCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: EPSSLGSKGSTIMGSVPFSTHSH*VGQVSG
Trigger: ACCAGAAACTTGCCCAACTCAGTGAGAATGAGTACT...AAAAGGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAATTTCGTCTGTCCTGTaGCTGTTCTTCATACATTCT +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQAISSVL*LFFIHS
Trigger: AGAATGTATGAAGAACAGTCACAGGACAGACGAAAT...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR TCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGATTTCGTCTGTCCTGTaGCTGTTCTTCATACATTCT +
Preference number: 4 (lower is better)
Translates to: RREGKFSEDAPGNFDIILISSVL*LFFIHS
Trigger: AGAATGTATGAAGAACAGTCACAGGACAGACGAAAT...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACCAAGACAATGAGGAAAATGTCTCCAGGGCATGTCAGAGGTCTTCACGGCAGCATTTCGTCTGTCCTGTaGCTGTTCTTCATACATTCT +
Preference number: 4 (lower is better)
Translates to: TKTMRKMSPGHVRGLHGSISSVL*LFFIHS
Trigger: AGAATGTATGAAGAACAGTCACAGGACAGACGAAAT...GCTGCCGTGAAGACCTCTGACATGCCCTGGAGACATTTTCCTCATTGTCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643403.1
CDS-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTATTTCGTCTGTCCTGTaGCTGTTCTTCATACATTCT +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPISSVL*LFFIHS
Trigger: AGAATGTATGAAGAACAGTCACAGGACAGACGAAAT...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATTTCGTCTGTCCTGTaGCTGTTCTTCATACATTCT +
Preference number: 4 (lower is better)
Translates to: GCYRFRRGDTGGGKANSRISSVL*LFFIHS
Trigger: AGAATGTATGAAGAACAGTCACAGGACAGACGAAAT...CCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTCCTGTTGAGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAAATAAGGGCTTGTTATaGGGTATGGTCTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: VLLSEEPCFGLSRVGGLANKGLL*GMVCKI
Trigger: TATCTTACAGACCATACCTCATAACAAGCCCTTATT...TGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR TCA 90 bp CACTTTGCAAAGGAATGTATTAACTCCTCTCCCAGGGTCAACTTAGTCTACGTGCGACATCCCACAAGCTaGTTAGTCCCAAACACATCC +
Preference number: 4 (lower is better)
Translates to: HFAKECINSSPRVNLVYVRHPTS*LVPNTS
Trigger: GGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCG...CACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp TTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTCCTTCCATTGACATTTaGACTCGCTGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTFSPGNLLAGGKGTWPLPSIDI*TRCDSR
Trigger: CCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGG...AAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCTCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFSSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGATCTTCACTTCCAAGGTaGCCATTGGAAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: AAIDLDVGILEEGRQILGSSLPR*PLEKTL
Trigger: TAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGA...TCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: LVSTVLAAIDLDVGILEEGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATAAGCACTGGGTCAGAGCCCACTCTACTGTGCCTTCCATTGACATTTGAACTCGGAAACAGGGTGGGATaGAGGAATCTTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: ISTGSEPTLLCLPLTFELGNRVG*RNLVFI
Trigger: GATGAATACAAGATTCCTTCATCCCACCCTGTTTCC...GAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILEGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATGGGCGTCCTGTTGAGTaGAGAACCATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: AFHFGVYSSGCYRFRRGDGRPVE*RTMLWI
Trigger: AATCCAAAGCATGGTTCTTCACTCAACAGGACGCCC...ATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCGTTTTGAATGTTCAATaGGACTATGCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSVLNVQ*DYALQE
Trigger: CTCCTGCAAGGCATAGTCTCATTGAACATTCAAAAC...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCGTTTTGAATGTTCAATaGGACTATGCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIVLNVQ*DYALQE
Trigger: CTCCTGCAAGGCATAGTCTCATTGAACATTCAAAAC...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGAGGAGCCAGGAGGTTTTaGATGTTCAATGAGACTATG +
Preference number: 4 (lower is better)
Translates to: NLLAGGKGTWPLARSTKGGARRF*MFNETM
Trigger: CATAGTCTCATTGAACATTCAAAACCTCCTGGCTCC...TCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp AGATTTAGACGTGGGGATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCTGATCATAGTCCTGTaGTGTTCTGTTAGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: RFRRGDTGGGKANSRRMLLIIVL*CSVSFD
Trigger: GTCAAAACTAACAGAACATCACAGGACTATGATCAG...GAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CACTTTGCAAAGGAATGTATTAACTCCTCTCCCAGGGTCAACTTAGTCTACGTGTGGGGTTTTCTGTGGTaGATTTCTGGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: HFAKECINSSPRVNLVYVWGFLW*ISGAVL
Trigger: CAGGACTGCACCAGAAATTCACCACAGAAAACCCCA...CACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATACTGGAGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: ILEEGRQILGGCSGQLRHLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AFHFGVYSSGCYRFRRGDMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...ATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGCTCCTCTATGTTATGTaGAAACCCCTTACAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLLLYVM*KPLTKG
Trigger: GCCTTTTGTAAGGGGTTTTCACATAACATAGAGGAG...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp GACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAAACACAGAGAGGGAAGAGCTaGAGGTTGTATTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DLTTLQRVCEEHSTGIKTQRGKS*RLYLWK
Trigger: CTTCCACAAATACAACCTTCAGCTCTTCCCTCTCTG...TGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGTGGAAGCATTCAGGCTaGAGGAAGAAGAAAAAGATC +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLWKHSG*RKKKKI
Trigger: GATCTTTTTCTTCTTCCTTCAGCCTGAATGCTTCCA...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643322.1
CDS-3UTR GCA 90 bp AGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTACGATCTGCGGCAGCTTaGTTAGGGGGTCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: SVSGTGAHAARKASSYLLRSAAA*LGGPTA
Trigger: TGCAGTTGGACCCCCTAAGCAAGCTGCCGCAGATCG...TAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTGAATTCAGCAGCATCTaGTTTTGTGATACGAAAGTT +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSEFSSI*FCDTKV
Trigger: AACTTTCGTATCACAAAAGCAGATGCTGCTGAATTC...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTCCTGTTGAGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAATCATATGTGAGAAATaGCATGTAACCTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: VLLSEEPCFGLSRVGGLAIICEK*HVTWMC
Trigger: ACACATCCAGGTTACATGGCATTTCTCACATATGAT...TGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR GCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTATCATATGTGAGAAATaGCATGTAACCTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSIICEK*HVTWMC
Trigger: ACACATCCAGGTTACATGGCATTTCTCACATATGAT...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAACTGTCCCAATCGAGTaGAACTTAACCGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQATVPIE*NLTGKY
Trigger: ATATTTTCCGGTTAAGTTGCACTCGATTGGGACAGT...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp CATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACATCCGACTCCTGCCATaGCGTAAGGCAAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: HRLLSILVSTVLAAIDLDIRLLP*RKARGA
Trigger: TGCACCTCTTGCCTTACGGCATGGCAGGAGTCGGAT...GTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATAGTGACTGGTGAGTTCTaGCTGTCAGTGCACTTTCGG +
Preference number: 4 (lower is better)
Translates to: LSILVSTVLAAIDLDVGIVTGEF*LSVHFR
Trigger: CCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC...TATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTAAGATCCCGAGGGCACCATaGTTCAAGAGGCATTGGCGG +
Preference number: 4 (lower is better)
Translates to: RKWNWCSCCKKSKFIFIKIPRAP*FKRHWR
Trigger: CCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGAT...CTTAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTGAGCCCACTCTACTGTaGCTTCCATTGACATTTGAA +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSEPTLL*LPLTFE
Trigger: TTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTC...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTTTGAGTGAAGAACCATaGTTTGGATTGTCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: VTADLTTLQRVCEEHSTGLSEEP*FGLSRV
Trigger: AACTCGGGACAATCCAAAGCATGGTTCTTCACTCAA...ACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGAACTGGTGCTCATGCTaGAAGAAAAGCAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: WSRELGSHRHLENPFKFQNWCSC*KKSKFI
Trigger: TATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTT...CTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCTCCCTTTAAATATATaGTTAAGTCAGGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSLPLNI*LSQGCL
Trigger: CAAACATCCCTGACTTAAGCATATATTTAAAGGGAG...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp TCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGTGTTCAATGAGACTATaGCTTGCAGGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SILVSTVLAAIDLDVGILCSMRL*LAGGGG
Trigger: TCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACA...CAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CTTGGATCAAAGGGGTCCACGATTATGGGCTCAGTTCCTTTTATTTCACAACGACAAATTCTCGGAGGATaGTCCGGGCAACTTCGACAT +
Preference number: 4 (lower is better)
Translates to: LGSKGSTIMGSVPFISQRQILGG*SGQLRH
Trigger: ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG...TCGTTGTGAAATAAAAGGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp CTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATAAGCCTCTTCTCAAGCTaGTACACGAGGAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LSILVSTVLAAIDLDVGISLFSS*YTRRRH
Trigger: GTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT...TATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCCAAGCCTAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: VDILSKHRSPLRSCTPKPNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...AGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTAGTTGGGCAAGTTTCTaGTTGTCATCATATTTACTC +
Preference number: 4 (lower is better)
Translates to: KLHSQASSQAATRGGDTSSWASF*LSSYLL
Trigger: GAGTAAATATGATGACAACCAGAAACTTGCCCAACT...AGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAGTTGGGCAAGTTTCTaGTTGTCATCATATTTACTC +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDSWASF*LSSYLL
Trigger: GAGTAAATATGATGACAACCAGAAACTTGCCCAACT...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: IAFHFGVYSSGCYRFRRGCGFLL*ARGEDP
Trigger: AGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACA...CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGAGTGGGTCAGGCTGTaGCTTTCTTCTCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: HRLLSILVSTVLAAIDLDEWVRL*LSSLGK
Trigger: CTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTC...GTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILEIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AFHFGVYSSGCYRFRRGDIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...ATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp ACCATGTGTTCCATTCAGCATACAGTGACCATTATCACAAGACCGAACAGGAGGACTCAGTCTATTGTCTaGTGGGATTGGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TMCSIQHTVTIITRPNRRTQSIV*WDWWRS
Trigger: AGACCTCCACCAATCCCACCAGACAATAGACTGAGT...CCTCCTGTTCGGTCTTGTGATAATGGTCACTGTATGCTGAATGGAACACATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR CCA 90 bp CTTGTTTTCTCTGAAAGAGAATTTGCTAACGGACCAGTACACTTTATGCTAGGGGCATTGGCGGGTCTCTaGAAGGCACGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LVFSEREFANGPVHFMLGALAGL*KARFPH
Trigger: ATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGC...CCCTAGCATAAAGTGTACTGGTCCGTTAGCAAATTCTCTTTCAGAGAAAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR CCA 90 bp AGTAATGGTCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTCTAAAGGCAAATCATaGCGTCTGTGTTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: SNGLVNLGVTGTWRTHSNSKGKS*RLCFRI
Trigger: TATGCGGAAACACAGACGCCATGATTTGCCTTTAGA...ATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGACCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403724.5
ENST00000405772.5
ENST00000642241.1
CDS-3UTR CCA 90 bp AAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGTCTAAAGGCAAATCATaGCGTCTGTGTTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: KNKEATAVDILSKHRSPLSKGKS*RLCFRI
Trigger: TATGCGGAAACACAGACGCCATGATTTGCCTTTAGA...CAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CTGGCAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCTCCTAGATTCAGGGAAACAGGGTaGGATGAAGGAATCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LAGGNGTGSEAESKTSPRFRETG*DEGILY
Trigger: ATACAAGATTCCTTCATCCCACCCTGTTTCCCTGAA...TCTAGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR CCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCTTCAGGGAAACAGGGTaGGATGAAGGAATCTTGTAT +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIFRETG*DEGILY
Trigger: ATACAAGATTCCTTCATCCCACCCTGTTTCCCTGAA...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCGATTGCTTTCCATTTTaGTGTCTACAGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QASSQAATRGGDTSLLNSDCFPF*CLQFWL
Trigger: CAGCCAGAACTGTAGACACCAAAATGGAAAGCAATC...GGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTCAGCAAGAGAGTTGGTaGGAAATGTTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: LTFSPGNLLAGGKGTWPLQQESW*EMLQQT
Trigger: GGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTG...AAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCTATATTTCAGGGAGATaGTCCTCTCATTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFYISGR*SSHSAS
Trigger: GGATGCTGAATGAGAGGACCATCTCCCTGAAATATA...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTCACTGCAATATGAACTaGTTCCCACAGCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSHCNMN*FPQLLG
Trigger: TCCTAAGAGCTGTGGGAACCAGTTCATATTGCAGTG...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp CACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGAGAAGCTGCACTCCTTAGAAAACTTTCTGTaGGTTCAAGCATTTACACAG +
Preference number: 4 (lower is better)
Translates to: HSCRHPEQASVSFEKLHSLENFL*VQAFTQ
Trigger: CTGTGTAAATGCTTGAACCCACAGAAAGTTTTCTAA...GGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp GGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTAAGACTATTTGCAATGTaGGCAAAAGGGAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: GRQILGGCSGQLRHYSGLRLFAM*AKGKQR
Trigger: TCTCTGTTTCCCTTTTGCCCACATTGCAAATAGTCT...TAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR CCA 90 bp GAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCATTGAGTTTGCCATCTaGAATTTTAGTTCGTCAAGA +
Preference number: 4 (lower is better)
Translates to: EAALPSLFSSCYTRRRHFIEFAI*NFSSSR
Trigger: TCTTGACGAACTAAAATTCCAGATGGCAAACTCAAT...GAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTACAAAGGGATCACCTTaGCAGTCAGAGACGGGGCAT +
Preference number: 4 (lower is better)
Translates to: FHFGVYSSGCYRFRRGDTTKGSP*QSETGH
Trigger: ATGCCCCGTCTCTGACTGCCAAGGTGATCCCTTTGT...AGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642241.1
ENST00000645425.1
CDS-3UTR TCA 90 bp GAGGAGGAGAAAGCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATGTTTCTGCCATTCATTaGGTTTGCCATCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: EEEKAGEEHHILHFQGDHVSAIH*VCHLEF
Trigger: AAATTCCAGATGGCAAACTCAATGAATGGCAGAAAC...ATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTCCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR TCA 90 bp GTGCCTGTGAACCATCTGAACATGAAGGAAGCTGATCATAGTCCTGTGATGTTCGGTCCAACTGCATCCTaGATAGCATCAATAATACCC +
Preference number: 4 (lower is better)
Translates to: VPVNHLNMKEADHSPVMFGPTAS*IASIIP
Trigger: GGGTATTATTGATGCTATTCAGGATGCAGTTGGACC...GAACATCACAGGACTATGATCAGCTTCCTTCATGTTCAGATGGTTCACAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGGAGGGAAGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGTCTTATTGCCCGTTTTaGCTTTTTCATAAGGCTATC +
Preference number: 4 (lower is better)
Translates to: RREGKFSEDAPGNFDIILSYCPF*LFHKAI
Trigger: GATAGCCTTATGAAAAAGTCAAAACGGGCAATAAGA...CAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ATGTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTAATTTCGTCTGTCCTGTaGCTGTTCTTCATACATTCT +
Preference number: 4 (lower is better)
Translates to: MWTARELVGNVTADLTTLISSVL*LFFIHS
Trigger: AGAATGTATGAAGAACAGTCACAGGACAGACGAAAT...TAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AAAGGGATCTTGGCAGTCAGAGACGGGGCATCTGCTTATGGTTCTGTTTTGAATCATGAAGGCACTGTCTaGATACTTTCCATGGTACGA +
Preference number: 4 (lower is better)
Translates to: KGILAVRDGASAYGSVLNHEGTV*ILSMVR
Trigger: TCGTACCATGGAAAGTATTCAGACAGTGCCTTCATG...ATTCAAAACAGAACCATAAGCAGATGCCCCGTCTCTGACTGCCAAGATCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643322.1
CDS-3UTR TCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATCAAATCTTACAGAGCTaGAAAGTGGAGCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHQILQS*KVEPIS
Trigger: TGAAATGGGCTCCACTTTTCAGCTCTGTAAGATTTG...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTAGGATCCTGGTGATGTaGCTGGTGAGTTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SIAFHFGVYSSGCYRFRRRILVM*LVSSAC
Trigger: ACAGGCAGAACTCACCAGTCACATCACCAGGATCCT...ACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCAAAACACTAACTATGCCTTTCTaGATTAGATCCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: DLTTLQRVCEEHSTGIKTLTMPF*IRSRRG
Trigger: TCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAG...TGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTGCCTGTGAACCATCTGAACATGAAGGAAGCTGATCATAGTCCTGTGATGTTCCTAACTATGCCTTTCTaGATTAGATCCAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: VPVNHLNMKEADHSPVMFLTMPF*IRSRRG
Trigger: TCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAG...GAACATCACAGGACTATGATCAGCTTCCTTCATGTTCAGATGGTTCACAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CAGGTGGTAATGGCACGGGATCAGAGGCTGAATCAAAAACATCTCCTAGAGGATAACCTAATGGAGGGATaGGAAGATCATAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVVMARDQRLNQKHLLEDNLMEG*EDHNQR
Trigger: CCTCTGATTATGATCTTCTCATCCCTCCATTAGGTT...ATCCTCTAGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403724.5
CDS-3UTR TCA 90 bp CTAGCAGGAGGCAAAGGAACTTGGCCACTTGCTAGATCAACAAAGGGATCACCTAAATTCACAACCCAGTaGGTCTGTGTTATACTGAAC +
Preference number: 4 (lower is better)
Translates to: LAGGKGTWPLARSTKGSPKFTTQ*VCVILN
Trigger: GTTCAGTATAACACAGACTCACTGGGTTGTGAATTT...AGGTGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642241.1
CDS-3UTR TCA 90 bp TTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGTTTTGAATGTTCAATaGGACTATGCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LVSTVLAAIDLDVGILEEVLNVQ*DYALQE
Trigger: CTCCTGCAAGGCATAGTCTCATTGAACATTCAAAAC...CTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCCTGATCATAGTCCTGTaGTGTTCTGTTAGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGILIIVL*CSVSFD
Trigger: GTCAAAACTAACAGAACATCACAGGACTATGATCAG...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGTGGGGTTTTCTGTGGTaGATTTCTGGTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLLSILVSTVLAAIDLDVWGFLW*ISGAVL
Trigger: CAGGACTGCACCAGAAATTCACCACAGAAAACCCCA...CACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp ACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTACAGGTATCCATAACCCTCTCCCATaGGTTTTGCAATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TADLTTLQRVCEEHSTGIHNPLP*VLQFLH
Trigger: ATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATG...GATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGGCAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCATAACCCTCTCCCATaGGTTTTGCAATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: RQILGGCSGQLRHYSGLSHNPLP*VLQFLH
Trigger: ATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATG...AGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp AGCAAAAACAAGGAAGCCACAGCTGTCGACATCCTGAGCAAGCATCGGTCTCCTTTGTCAGTTCAACCCTaGTTTAAAAATATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SKNKEATAVDILSKHRSPLSVQP*FKNMAS
Trigger: GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAA...AGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp TTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTATGTTACAGCAGACCTaGCCACGCTACAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FHFGVYSSGCYRFRRGDTMLQQT*PRYKGS
Trigger: AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACAT...AGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTGAAGAACACAGTAAAGCATCTTGTGAATaGGAGAAATGGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: GNVTADLTTLQRVCEEHSKASCE*EKWNWT
Trigger: GGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTT...ACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTGCCTGTGAACCATCTGAACATGAAGGAAGCTGATCATAGTCCTGTGATGTTCCACCTAATGGAGGGATaGGAAGATCATAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: VPVNHLNMKEADHSPVMFHLMEG*EDHNQR
Trigger: CCTCTGATTATGATCTTCTCATCCCTCCATTAGGTG...GAACATCACAGGACTATGATCAGCTTCCTTCATGTTCAGATGGTTCACAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp GTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACACCTAATGGAGGGATaGGAAGATCATAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: VLTFSPGNLLAGGKGTWPHLMEG*EDHNQR
Trigger: CCTCTGATTATGATCTTCTCATCCCTCCATTAGGTG...TGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR TCA 90 bp CCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCTTTTTGGATCACAGTaGAACAAAGTCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: PSLFSSCYTRRRHFSLEFLFGSQ*NKVWIT
Trigger: AGTGATCCAGACTTTGTTTCACTGTGATCCAAAAAG...GAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR TCA 90 bp CATGATGGATGTGTCTACTCAGTCTATTGTCTGGTGGGATTGGTGGAGGTCTTTTTGGGTGAGAAGGGTTaGTATTGGCCACATATCAGT +
Preference number: 4 (lower is better)
Translates to: HDGCVYSVYCLVGLVEVFLGEKG*YWPHIS
Trigger: ACTGATATGTGGCCAATATCAACCCTTCTCACCCAA...AAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645759.1
CDS-3UTR GCA 90 bp CTTGGATCAAAGGGGTCCACGATTATGGGCTCAGTTCCTTTTATTTCACAACGAGACCACCAGGGTTTCTaGCATTCATTGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LGSKGSTIMGSVPFISQRDHQGF*HSLSLP
Trigger: TGGCAAACTCAATGAATGGCAGAAACCCTGGTGGTC...TCGTTGTGAAATAAAAGGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp TCTCGTGAACTTGGGAGTCACCGGCACCTGGAGAACCCATTCAAATTTCAGGCAGAATTCAGCAGCATCTaGTTTTGTGATACGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SRELGSHRHLENPFKFQAEFSSI*FCDTKV
Trigger: AACTTTCGTATCACAAAAGCAGATGCTGCTGAATTC...TGCCTGAAATTTGAATGGGTTCTCCAGGTGCCGGTGACTCCCAAGTTCACGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR GCA 90 bp GTGGACAGCAAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAGAATTCAGCAGCATCTaGTTTTGTGATACGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VDSKRVGGKCYSRPDHATEFSSI*FCDTKV
Trigger: AACTTTCGTATCACAAAAGCAGATGCTGCTGAATTC...TGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394030.8
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGGAGGTGCACATCAAATaGCCACAAGGCTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILEEVHIK*PQGSIL
Trigger: CAAGATTGAGCCTTGTGGGCATTTGATGTGCACCTC...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATGAGGTGCACATCAAATaGCCACAAGGCTCAATCTTG +
Preference number: 4 (lower is better)
Translates to: AFHFGVYSSGCYRFRRGDEVHIK*PQGSIL
Trigger: CAAGATTGAGCCTTGTGGGCATTTGATGTGCACCTC...ATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CAAATTCTCGGAGGATGCTCCGGGCAACTTCGACATTATTCTGGGCTATCTCTATTGAGTGAAGAACCATaGTTTGGATTGTCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: QILGGCSGQLRHYSGLSLLSEEP*FGLSRV
Trigger: AACTCGGGACAATCCAAAGCATGGTTCTTCACTCAA...TAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTTCTGTTAGTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGATGTTCAATGAGACTATaGCTTGCAGGAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VLLVLTFSPGNLLAGGKGCSMRL*LAGGGG
Trigger: TCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACA...TCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAACTAACAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp CGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGCAAATTCTCGGAGGATaGTCCGGGCAACTTCGACAT +
Preference number: 4 (lower is better)
Translates to: RLLSILVSTVLAAIDLDVQILGG*SGQLRH
Trigger: ATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTG...CACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTTTTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCAGTCTACAGTTCTGGCTaGTATAGATTTAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: VLTFSPGNLLAGGKGTWPVYSSG*YRFRRG
Trigger: CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGAC...TGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GAGAAAGCCGGGGAGGAACATCATATTCTTCACTTCCAAGGTGACCATTGGAAAGTCTACAGTTCTGGCTaGTATAGATTTAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: EKAGEEHHILHFQGDHWKVYSSG*YRFRRG
Trigger: CCCACGTCTAAATCTATAGCAGCCAGAACTGTAGAC...TTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645759.1
ENST00000646499.1
CDS-3UTR GCA 90 bp TTTGAGAAGCTGCACTCCCAAGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: FEKLHSQASSQAATRGGDNKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...GTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000394030.8
ENST00000642241.1
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR GCA 90 bp GTCCTGTTGAGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAAACAAACTGCAACTTTaGCAAACTGTAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: VLLSEEPCFGLSRVGGLANKLQL*QTVNKV
Trigger: TACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTT...TGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646499.1
CDS-3UTR GCA 90 bp AAGAGAGTTGGTGGGAAATGTTACAGCAGACCTGACCACGCTACAAAGGGTCTGTTTCAGGTCCAGGTTTaGTATATCATCACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: KRVGGKCYSRPDHATKGLFQVQV*YIITSP
Trigger: AGGACTAGTGATGATATAGCAAACCTGGACCTGAAA...CAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394030.8
ENST00000645759.1
CDS-3UTR CCA 90 bp AGTGAAGAACCATGCTTTGGATTGTCCCGAGTTGGAGGCCTGGCAGGTGGTAATTCTGAATACTTTCCATaGTACGATAGTTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SEEPCFGLSRVGGLAGGNSEYFP*YDSFVS
Trigger: GGAGACAAAACTATCGTACCATGGAAAGTATTCAGA...ATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000646499.1
CDS-3UTR CCA 90 bp CATCGATTGCTTTCCATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACTGTGGCTTTCTTCTCTaGGCAAGGGGAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: HRLLSILVSTVLAAIDLDCGFLL*ARGEDP
Trigger: AGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACA...GTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp TTAATTAGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATGAGTGGGTCAGGCTGTaGCTTTCTTCTCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LISVSGTGAHAARKASSYEWVRL*LSSLGK
Trigger: CTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTC...ATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCTAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp AGCGTAAGTGGAACTGGTGCTCATGCTGCAAGAAAAGCAAGTTCATATTTATTACTTAGATGTGGGATCTaGAGTGGGTCAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SVSGTGAHAARKASSYLLLRCGI*SGSGCG
Trigger: GCCACAGCCTGACCCACTCCAGATCCCACATCTAAG...TAATAAATATGAACTTGCTTTTCTTGCAGCATGAGCACCAGTTCCACTTACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp TTGACATTTTCACCTGGTAACCTTCTAGCAGGAGGCAAAGGAACTTGGCCACTTAGGTGGTGCTGGGAGTaGTTTATCTTGTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LTFSPGNLLAGGKGTWPLRWCWE*FILFSH
Trigger: GTGAGAAAACAAGATAAACCACTCCCAGCACCACCT...AAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp GATGCCCAACTACTACACTACTACCTTAATCATCTACATGGAGTAATGGTCTCGATTGTCTGGTGGGATTaGTGGAGGTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DAQLLHYYLNHLHGVMVSIVWWD*WRSFRW
Trigger: CCACCTGAAAGACCTCCACCAATCCCACCAGACAAT...CGAGACCATTACTCCATGTAGATGATTAAGGTAGTAGTGTAGTAGTTGGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403724.5
ENST00000405772.5
CDS-3UTR CCA 90 bp ATTTTGGTGTCTACAGTTCTGGCTGCTATAGATTTAGACGTGGGGATACTGGAGACTCAGTCTATTGTCTaGTGGGATTGGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ILVSTVLAAIDLDVGILETQSIV*WDWWRS
Trigger: AGACCTCCACCAATCCCACCAGACAATAGACTGAGT...CTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643322.1
ENST00000645425.1
ENST00000645759.1
ENST00000646499.1
ENST00000646825.1
CDS-3UTR CCA 90 bp AGCCTCTTCTCAAGCTGCTACACGAGGAGGAGACACTTCTCTCTTGAATTCCATTCTAAAGGCAAATCATaGCGTCTGTGTTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: SLFSSCYTRRRHFSLEFHSKGKS*RLCFRI
Trigger: TATGCGGAAACACAGACGCCATGATTTGCCTTTAGA...ATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAG