RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBFA2T3 (Homo sapiens)

Ensembl gene IDs: ENSG00000129993

Ensembl transcript IDs: ENST00000268679.9, ENST00000327483.9, ENST00000562719.5, ENST00000563640.1, ENST00000563856.1, ENST00000563920.1, ENST00000564416.1, ENST00000566868.1, ENST00000569443.5, ENST00000569464.5, ENST00000570046.1

Found 464 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCAGGCATCGGAGGCCAGGCACAGCATCCGGTGGGCCTGGAGCTaGGTGGGGTTGGCACGGTGCTGTGTCCGGCAGGCCAGGGGCCAG +
Preference number: 1 (lower is better)
Translates to: GQASEARHSIRWAWS*VGLARCCVRQARGQ
Trigger: CTGGCCCCTGGCCTGCCGGACACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCTGTGCCTGGCCTCCGATGCCTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 90 bp CTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCGGTGGGCCTaGAGCTGGGTGGGGTTGGCACGGTGCTGTGTCCGGCAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LAGQASEARHSIRWA*SWVGLARCCVRQAR
Trigger: CCTGGCCTGCCGGACACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 90 bp CCACGCACACAGATGCCAGGCCACGGGCCACGCCACGCGCACAGATaGCAGGCCACGGGCCACGCCACACACACAGATGCCAGGCCACGG +
Preference number: 1 (lower is better)
Translates to: PRTQMPGHGPRHAHR*QATGHATHTDARPR
Trigger: CCGTGGCCTGGCATCTGTGTGTGTGGCGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGCGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 90 bp GTGACTAATTGGTCGGCTCCCCCAGGTCAGGCGGGGCGCAGTGTCTaGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCGGTGGGCCT +
Preference number: 1 (lower is better)
Translates to: VTNWSAPPGQAGRSV*QARHRRPGTASGGP
Trigger: AGGCCCACCGGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTGACCTGGGGGAGCCGACCAATTAGTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR TCA 90 bp CGGCCTCTTCAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTTGGACTCGGC +
Preference number: 1 (lower is better)
Translates to: RPLQPSSRCPQARSR*GSSAGTREARLGLG
Trigger: GCCGAGTCCAAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTGAAGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566868.1
3UTR GCA 90 bp ACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCCAGGCTaGGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATG +
Preference number: 1 (lower is better)
Translates to: TDAKPRATPHAQMPG*GPCLLSVLVLGASM
Trigger: CATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGGCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 90 bp ACTCGCGAGGCACGTCTTGGACTCGGCTGGGAGCCGTGTGTGTCCTaGGCCTCTCCTGTGTCAGCATTCGTCGCTGAGGCGGAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: TREARLGLGWEPCVS*ASPVSAFVAEAEKQ
Trigger: CTGCTTCTCCGCCTCAGCGACGAATGCTGACACAGGAGAGGCCCAGGACACACACGGCTCCCAGCCGAGTCCAAGACGTGCCTCGCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
3UTR CCA 90 bp GAGGCAGTTGAGAGGAGTGGAGGGAGGGTGGGCAGGGCTGGAGGATaGGAGGGAGCACGTCTGATAGAAAACGTCACCGAGACACACCCC +
Preference number: 1 (lower is better)
Translates to: EAVERSGGRVGRAGG*EGARLIENVTETHP
Trigger: GGGGTGTGTCTCGGTGACGTTTTCTATCAGACGTGCTCCCTCCCATCCTCCAGCCCTGCCCACCCTCCCTCCACTCCTCTCAACTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 90 bp GTAGAGGAGGACGGGCTGGCCGAGAAGCAGTGTTTCAGGGAGGCCTaGTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAA +
Preference number: 1 (lower is better)
Translates to: VEEDGLAEKQCFREA*WLRMLEKQSRINPK
Trigger: TTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGGCCAGCCCGTCCTCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 90 bp GGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATTaGACTGAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCC +
Preference number: 1 (lower is better)
Translates to: GGLFVAGSVAGSLPY*TEFLELLIATHTDA
Trigger: GGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTCAGTGCAATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 90 bp GAGGAGGACGGGCTGGCCGAGAAGCAGTGTTTCAGGGAGGCCTGCTaGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGAT +
Preference number: 1 (lower is better)
Translates to: EEDGLAEKQCFREAC*LRMLEKQSRINPKD
Trigger: ATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGGCCAGCCCGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR TCA 90 bp GCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATTGCACTaGGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: AVRGWFSSWVTPVLH*VPRTPDSHAHRCQA
Trigger: GGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTCAGTGCAATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 90 bp GGCTGGCCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATaGTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTCACAGTT +
Preference number: 1 (lower is better)
Translates to: GWPRSSVSGRPAGSA*SKSSRESTQKIVTV
Trigger: AACTGTGACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR TCA 90 bp GAAGAGACGTTGTCAGGAGGTCTCCGCGCGGAATCATTAGGTAGCTaGGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCT +
Preference number: 1 (lower is better)
Translates to: EETLSGGLRAESLGS*GRCTECGFVGSVSS
Trigger: AGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGCTACCTAATGATTCCGCGCGGAGACCTCCTGACAACGTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 90 bp TTTTTGGATTTCCTTTGGAGCAGAGGTGTGTCCGGTATCCTTGGCTaGCTAGCTAGCAAGGTAGTTCACAAGTATGCTTCCTTTGCTTTT +
Preference number: 1 (lower is better)
Translates to: FLDFLWSRGVSGILG*LASKVVHKYASFAF
Trigger: AAAAGCAAAGGAAGCATACTTGTGAACTACCTTGCTAGCTAGCCAGCCAAGGATACCGGACACACCTCTGCTCCAAAGGAAATCCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGCGGTGGGCCTGGAGCTaGGTGGGGTTGGCACGGTGC +
Preference number: 2 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATRWAWS*VGLARC
Trigger: GCACCGTGCCAACCCCACCCAGCTCCAGGCCCACCG...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGCGGGGCGCAGTGTCTaGCAGGCCAGGCATCGGAGG +
Preference number: 2 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATAGRSV*QARHRR
Trigger: CCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGC...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGAGAGGAAAAGAGAGGTaGGCAGAGCCGCCGCGCCTG +
Preference number: 2 (lower is better)
Translates to: RCQATGHATRTDARPRATRGKER*AEPPRL
Trigger: CAGGCGCGGCGGCTCTGCCCACCTCTCTTTTCCTCT...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGGCCTGGAGCTGGGTaGGGTTGGCACGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATGPGAG*GWHGAV
Trigger: CACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCC...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCAAGCATCCGGTGGGCCTaGAGCTGGGTGGGGTTGGCA +
Preference number: 2 (lower is better)
Translates to: GATAHGPRTRGGRTNAYASIRWA*SWVGLA
Trigger: TGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCT...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGTCCTCCCGTCTTCGCTaGTCAGCCTCACGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATSSRLR*SASRPW
Trigger: CCAGGGGCGTGAGGCTGATCAGCGAAGACGGGAGGA...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp CCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGTGGGGTTGGCACGGTaGTGTGTCCGGCAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PDSHAHRCQATGHATRTDVGLAR*CVRQAR
Trigger: CCTGGCCTGCCGGACACAGCACCGTGCCAACCCCAC...ATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp GGTGAGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTTGGACTCGGCTGGGAGCGTCAGCATTCGTCGCTaGGGCGGAGAAGCAGAGACC +
Preference number: 2 (lower is better)
Translates to: GEGPRQELARHVLDSAGSVSIRR*GGEAET
Trigger: GGTCTCTGCTTCTCCGCCTCAGCGACGAATGCTGAC...GCTCCCAGCCGAGTCCAAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
3UTR-3UTR GCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGTGGGCACAAACCCTCTaGACCCAAATATCCCGACAC +
Preference number: 2 (lower is better)
Translates to: RCQATGHATRTDARPRATWAQTL*TQISRH
Trigger: GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCA...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCAGAGGAAAAGAGAGGTaGGCAGAGCCGCCGCGCCTG +
Preference number: 2 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCRGKER*AEPPRL
Trigger: CAGGCGCGGCGGCTCTGCCCACCTCTCTTTTCCTCT...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCCACGCGCACAGATAACGCATCTGAGGGGTaGCTGGGCAGGAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: PDSHAHRCQATGHATRTDNASEG*LGRSTR
Trigger: CCTGGTGCTCCTGCCCAGCCACCCCTCAGATGCGTT...ATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCGTGGGGTTGGCACGGTaGTGTGTCCGGCAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFVGLAR*CVRQAR
Trigger: CCTGGCCTGCCGGACACAGCACCGTGCCAACCCCAC...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCATGGGCACAAACCCTCTaGACCCAAATATCCCGACAC +
Preference number: 2 (lower is better)
Translates to: CQATGHATHTDARPRATPWAQTL*TQISRH
Trigger: GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCA...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATGGAGCTGGGTGGGGTTaGCACGGTGCTGTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNGAGWG*HGAVSG
Trigger: GCCGGACACAGCACCGTGCCAACCCCACCCAGCTCC...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTGAATCATTAGGTAGCTaGGGCAGGTGCACTGAATGC +
Preference number: 2 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPESLGS*GRCTEC
Trigger: GCATTCAGTGCACCTGCCTCAGCTACCTAATGATTC...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGCAGAGCCGCCGCGCCTaGGGCATCTGCTCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETQSRRA*GICSAV
Trigger: GACAGCAGAGCAGATGCCGCAGGCGCGGCGGCTCTG...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGAGCATCCGGTGGGCCTaGAGCTGGGTGGGGTTGGCA +
Preference number: 2 (lower is better)
Translates to: EFLELLIATHTDARPRATSIRWA*SWVGLA
Trigger: TGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCT...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCGGGGAGGGGCACAGCTaGGTTCAGATCTCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCGEGHS*VQISSY
Trigger: ATAGCTGGAGATCTGAACCCAGCTGTGCCCCTCCCC...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATAAGTCACAGGGGGCGTaGGGACAGACGGCGTGTCCT +
Preference number: 2 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNKSQGA*GQTACP
Trigger: AGGACACGCCGTCTGTCCTCACGCCCCCTGTGACTT...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATCCGAGAGGTTGGAGTTaGGGCGATGGGGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNPRGWS*GDGAER
Trigger: TCTCTCAGCCCCATCGCCCCAACTCCAACCTCTCGG...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGTGGAAAACGGAAATATaGAAAGTCACAGGGGGCGTG +
Preference number: 2 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATWKTEI*KVTGGV
Trigger: CACGCCCCCTGTGACTTTTCATATTTCCGTTTTCCA...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCAAAGTCGCTTCTAACTaGGCACAAACCCTCTGCACC +
Preference number: 2 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCKVASN*AQTLCT
Trigger: GGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTT...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATTTCAGGGAGGCCTGCTaGCTCCGCATGCTCGAAAAG +
Preference number: 2 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNFREAC*LRMLEK
Trigger: CTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAA...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCATTCTTTGTCCATTTCTaGGTAGCTCTTTTGCCAACA +
Preference number: 2 (lower is better)
Translates to: CQATGHATHTDARPRATPFFVHF*VALLPT
Trigger: TGTTGGCAAAAGAGCTACTCAGAAATGGACAAAGAA...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCCTGCTGGCTCCGCATaGTCGAAAAGCAGTCGAGAA +
Preference number: 2 (lower is better)
Translates to: EFLELLIATHTDARPRATPAGSA*SKSSRE
Trigger: TTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGG...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGGGGCCTGGAGCTGGGTaGGGTTGGCACGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSGPGAG*GWHGAV
Trigger: CACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCC...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACGCGGGGCGCAGTGTCTaGCAGGCCAGGCATCGGAGG +
Preference number: 2 (lower is better)
Translates to: TKVASNWAQTLCTQISRHAGRSV*QARHRR
Trigger: CCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGC...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGGCAGCAGTGACTAATTaGTCGGCTCCCCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETAAVTN*SAPPGQ
Trigger: CTGACCTGGGGGAGCCGACCAATTAGTCACTGCTGC...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCCTGCGGCATCTGCTCTaGTGTCTAAAGCTCAGTCGA +
Preference number: 2 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFLRHLL*CLKLSR
Trigger: TCGACTGAGCTTTAGACAGCAGAGCAGATGCCGCAG...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATGAATCATTAGGTAGCTaGGGCAGGTGCACTGAATGC +
Preference number: 2 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNESLGS*GRCTEC
Trigger: GCATTCAGTGCACCTGCCTCAGCTACCTAATGATTC...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTGCTTCTGAGGATGCTTaGAGAGACGTTGTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSASEDA*RDVVRR
Trigger: CCTCCTGACAACGTCTCTTCAAGCATCCTCAGAAGC...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGGCTTCTGAGGATGCTTaGAGAGACGTTGTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETASEDA*RDVVRR
Trigger: CCTCCTGACAACGTCTCTTCAAGCATCCTCAGAAGC...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTGCAGCAGTGACTAATTaGTCGGCTCCCCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCAAVTN*SAPPGQ
Trigger: CTGACCTGGGGGAGCCGACCAATTAGTCACTGCTGC...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGTTTTTGGATTTCCTTTaGAGCAGAGGTGTGTCCGGT +
Preference number: 2 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETFLDFL*SRGVSG
Trigger: ACCGGACACACCTCTGCTCCAAAGGAAATCCAAAAA...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTTCTTTGTCCATTTCTaGGTAGCTCTTTTGCCAACA +
Preference number: 2 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFFFVHF*VALLPT
Trigger: TGTTGGCAAAAGAGCTACTCAGAAATGGACAAAGAA...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATTACTCGGTGCAAGCATaGATTTCTTTATCCCTTTAT +
Preference number: 2 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYYSVQA*ISLSLY
Trigger: ATAAAGGGATAAAGAAATTCATGCTTGCACCGAGTA...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGTGTCCTTGTACTCGGTaGAAGCATGAATTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: EFLELLIATHTDARPRATCPCTR*KHEFLY
Trigger: ATAAAGAAATTCATGCTTGCACCGAGTACAAGGACA...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAGGAGCTGGGTGGGGTTaGCACGGTGCTGTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGGAGWG*HGAVSG
Trigger: GCCGGACACAGCACCGTGCCAACCCCACCCAGCTCC...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTTCCGGTATCCTTGGCTaGCTAGCTAGCAAGGTAGTT +
Preference number: 2 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCSGILG*LASKVV
Trigger: AACTACCTTGCTAGCTAGCCAGCCAAGGATACCGGA...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR TCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCCTCAGTCGAGGCTTCTaGGGATGCTTGAAGAGACGT +
Preference number: 2 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPLSRGF*GCLKRR
Trigger: ACGTCTCTTCAAGCATCCTCAGAAGCCTCGACTGAG...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR GCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCCTGCGGCATCTGCTCTaGTGTCTAAAGCTCAGTCGA +
Preference number: 2 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPLRHLL*CLKLSR
Trigger: TCGACTGAGCTTTAGACAGCAGAGCAGATGCCGCAG...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCTCCGGTATCCTTGGCTaGCTAGCTAGCAAGGTAGTT +
Preference number: 2 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPSGILG*LASKVV
Trigger: AACTACCTTGCTAGCTAGCCAGCCAAGGATACCGGA...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGGAGGGGCACAGCTaGGTTCAGATCTCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: RESTQKIVTVLFRNYALSGEGHS*VQISSY
Trigger: ATAGCTGGAGATCTGAACCCAGCTGTGCCCCTCCCC...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCTTTTTGGATTTCCTTTaGAGCAGAGGTGTGTCCGGT +
Preference number: 2 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPFLDFL*SRGVSG
Trigger: ACCGGACACACCTCTGCTCCAAAGGAAATCCAAAAA...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 72 bp TGGTCGGCTCCCCCAGGTCAGGCGGGGCGCAGTGTCTaGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCC +
Preference number: 3 (lower is better)
Translates to: WSAPPGQAGRSV*QARHRRPGTAS
Trigger: GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTGACCTGGGGGAGCCGACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 72 bp CAGGCATCGGAGGCCAGGCACAGCATCCGGTGGGCCTaGAGCTGGGTGGGGTTGGCACGGTGCTGTGTCCGG +
Preference number: 3 (lower is better)
Translates to: QASEARHSIRWA*SWVGLARCCVR
Trigger: CCGGACACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCTGTGCCTGGCCTCCGATGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 72 bp CAGATGCCAAGCCACGGGCCACGCCACACGCACAGATaGCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTG +
Preference number: 3 (lower is better)
Translates to: QMPSHGPRHTHR*QAAGRACCLSL
Trigger: CAAGGACAGACAGCAGGCACGGCCCGCAGCCTGGCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR TCA 72 bp CAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTT +
Preference number: 3 (lower is better)
Translates to: QPSSRCPQARSR*GSSAGTREARL
Trigger: AAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566868.1
3UTR-3UTR CAA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCCTGAATGCGGTTTTGTaGGTTCTGTGTCTTCTTTCG +
Preference number: 3 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTLNAVL*VLCLLS
Trigger: CGAAAGAAGACACAGAACCAACAAAACCGCATTCAG...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATATGCTTGAAGAGACGTaGTCAGGAGGTCTCCGCGCG +
Preference number: 3 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYMLEET*SGGLRA
Trigger: CGCGCGGAGACCTCCTGACAACGTCTCTTCAAGCAT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATAAATCGCTGAGGCAGTaGAGAGGAGTGGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYKSLRQ*RGVEGG
Trigger: CCCTCCCTCCACTCCTCTCAACTGCCTCAGCGATTT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 72 bp GACGGGCTGGCCGAGAAGCAGTGTTTCAGGGAGGCCTaGTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATC +
Preference number: 3 (lower is better)
Translates to: DGLAEKQCFREA*WLRMLEKQSRI
Trigger: GATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGGCCAGCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 72 bp GGGCTGGCCGAGAAGCAGTGTTTCAGGGAGGCCTGCTaGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAAC +
Preference number: 3 (lower is better)
Translates to: GLAEKQCFREAC*LRMLEKQSRIN
Trigger: GTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGTGGAGCTGGGTGGGGTaGGCACGGTGCTGTGTCCGG +
Preference number: 3 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSWSWVG*ARCCVR
Trigger: CCGGACACAGCACCGTGCCAACCCCACCCAGCTCCA...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACTTGTGTTTGCTTTTTaGGATTTCCTTTGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLLVFAF*DFLWSR
Trigger: TCTGCTCCAAAGGAAATCCAAAAAAGCAAACACAAG...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACTGGAGCTGGGTGGGGTaGGCACGGTGCTGTGTCCGG +
Preference number: 3 (lower is better)
Translates to: TKVASNWAQTLCTQISRHWSWVG*ARCCVR
Trigger: CCGGACACAGCACCGTGCCAACCCCACCCAGCTCCA...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR TCA 72 bp GGCTGGTTCAGTAGCTGGGTCACTCCCGTATTGCACTaGGTTCCTAGAACTCCTGATAGCCACGCACACAGA +
Preference number: 3 (lower is better)
Translates to: GWFSSWVTPVLH*VPRTPDSHAHR
Trigger: TCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTCAGTGCAATACGGGAGTGACCCAGCTACTGAACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 72 bp TTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATTaGACTGAGTTCCTAGAACTCCTGATAGCCACGCAC +
Preference number: 3 (lower is better)
Translates to: FVAGSVAGSLPY*TEFLELLIATH
Trigger: GTGCGTGGCTATCAGGAGTTCTAGGAACTCAGTGCAATACGGGAGTGACCCAGCTACTGAACCAGCCACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGGCACTGAATGCGGTTTaGTTGGTTCTGTGTCTTCTT +
Preference number: 3 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETALNAV*LVLCLL
Trigger: AAGAAGACACAGAACCAACAAAACCGCATTCAGTGC...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR TCA 72 bp TTGTCAGGAGGTCTCCGCGCGGAATCATTAGGTAGCTaGGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCT +
Preference number: 3 (lower is better)
Translates to: LSGGLRAESLGS*GRCTECGFVGS
Trigger: AGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGCTACCTAATGATTCCGCGCGGAGACCTCCTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR TCA 72 bp CATCTGCTCTGCTGTCTAAAGCTCAGTCGAGGCTTCTaGGGATGCTTGAAGAGACGTTGTCAGGAGGTCTCC +
Preference number: 3 (lower is better)
Translates to: HLLCCLKLSRGF*GCLKRRCQEVS
Trigger: GGAGACCTCCTGACAACGTCTCTTCAAGCATCCTCAGAAGCCTCGACTGAGCTTTAGACAGCAGAGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATCTTGTGTTTGCTTTTTaGGATTTCCTTTGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNLVFAF*DFLWSR
Trigger: TCTGCTCCAAAGGAAATCCAAAAAAGCAAACACAAG...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR-3UTR CAA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATAATCAACCCAAAAGATaGTCACAGTTTTGTTTCGGA +
Preference number: 3 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYNQPKR*SQFCFG
Trigger: TCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 72 bp TTCCTTTGGAGCAGAGGTGTGTCCGGTATCCTTGGCTaGCTAGCTAGCAAGGTAGTTCACAAGTATGCTTCC +
Preference number: 3 (lower is better)
Translates to: FLWSRGVSGILG*LASKVVHKYAS
Trigger: GGAAGCATACTTGTGAACTACCTTGCTAGCTAGCCAGCCAAGGATACCGGACACACCTCTGCTCCAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CCA 72 bp ACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTaGGCACAAACCCTCTGCACCCAAATATCCCGACAC +
Preference number: 3 (lower is better)
Translates to: TPTQKRTKVASN*AQTLCTQISRH
Trigger: GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR GCA 72 bp AGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTaGACCCAAATATCCCGACACCCACAAACAAAATCA +
Preference number: 3 (lower is better)
Translates to: RTKVASNWAQTL*TQISRHPQTKS
Trigger: TGATTTTGTTTGTGGGTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGAGTGCGGCGGCGGTGTaGGCTGCGGTGGCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATSAAAV*AAVARC
Trigger: GCAACGGGCCACCGCAGCCCACACCGCCGCCGCACT...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGGTGGGCCAGGTGGGCTaGGGGAGCCGGGGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATVGQVG*GSRGEK
Trigger: CTTCTCGCCCCGGCTCCCCCAGCCCACCTGGCCCAC...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTCCGGGCCCCGCAGGCTaGGGGCAGGTGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPPGPAG*GQVLCG
Trigger: TCCACACAGCACCTGCCCCCAGCCTGCGGGGCCCGG...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCACAGGCCAGGGGCCAGTaGGGTCAGCGGGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPQARGQ*GQRGTV
Trigger: CACCGTGCCCCGCTGACCCCACTGGCCCCTGGCCTG...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCACCTGCGCAGCACCGTaGGCGAGCGCCGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTTCAAP*ASAASS
Trigger: AGAAGACGCGGCGCTCGCTCACGGTGCTGCGCAGGT...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTCGAGGCACGTCTAGCTaGGGCCCTTCGGGACCGGCG +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPRGTSS*GPSGPA
Trigger: CGCCGGTCCCGAAGGGCCTCAGCTAGACGTGCCTCG...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCACCGGAGGCCTGCAGCTaGGCCCGCCACTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPPEACS*ARHFPD
Trigger: GTCAGGGAAGTGGCGGGCGCAGCTGCAGGCCTCCGG...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCAGCTGCGGTGGCCCGTTaGTGGGGCTGTAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPAAVAR*WGCSAG
Trigger: CCCAGCGCTACAGCCCCAGCAACGGGCCACCGCAGC...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGCAGAGCCGCCGCGCCTaGGGCATCTGCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATQSRRA*GICSAV
Trigger: GACAGCAGAGCAGATGCCGCAGGCGCGGCGGCTCTG...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCAGGGGGTGGGAGCCCTaGGGCTCATGTGACGCGGGG +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASRGWEP*GSCDAG
Trigger: CCCCGCGTCACATGAGCCCCAGGGCTCCCACCCCCT...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCCCTGTCCACTGGGGCTaGGCCGCCCTTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASPVHWG*AALPGT
Trigger: GGTCCCAGGAAGGGCGGCCCAGCCCCAGTGGACAGG...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGGGGCGGGCGTCTGCTTaGCCAGGCGTGCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATGRASA*PGVHSA
Trigger: TGCACTGTGCACGCCTGGCCAAGCAGACGCCCGCCC...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCACGGCTTCGCTGGGGCTaGCAGCACCCACAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPRLRWG*QHPQAG
Trigger: CCCTGCCTGTGGGTGCTGCCAGCCCCAGCGAAGCCG...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGTCCTCCCGTCTTCGCTaGTCAGCCTCACGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATSSRLR*SASRPW
Trigger: CCAGGGGCGTGAGGCTGATCAGCGAAGACGGGAGGA...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGAGAGGCGAACGCATCTaGGGGGTGGCTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATRGERI*GVAGQE
Trigger: CTCCTGCCCAGCCACCCCTCAGATGCGTTCGCCTCT...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTAGGTGTGGACCGGGGCTaGGTCTTCACCTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLGVDRG*VFTSAG
Trigger: CCCAGCGGAGGTGAAGACGCAGCCCCGGTCCACACC...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCACGCCACGCACACAGATaGCAGGCCACGGGCCACACC +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPRHAHR*QATGHT
Trigger: GGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCG...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCCGGTCCGGGAGTCGCTaGTCCTTCCAGCTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTRSGSR*SFQLGP
Trigger: GGGACCAAGCTGGAAGGAGCAGCGACTCCCGGACCG...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327483.9
CDS-3UTR CCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACTGACAGGAACCATCTaGGGCCCTGCCCTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLLTGTI*GPALRG
Trigger: GCCGCGCAGGGCAGGGCCCCAGATGGTTCCTGTCAG...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTGGAAAGAGGAGGGGCTaGGCCAGCTGGGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPGKRRG*ASWGVL
Trigger: CAGGACGCCCCAGCTGGCCCAGCCCCTCCTCTTTCC...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTCGGTGTGGGCTGCGGTaGCCCGTTGCTGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPRCGLR*PVAGAV
Trigger: TACAGCCCCAGCAACGGGCCACCGCAGCCCACACCG...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGCAGGCCAGGGGCCAGTaGGGTCAGCGGGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATQARGQ*GQRGTV
Trigger: CACCGTGCCCCGCTGACCCCACTGGCCCCTGGCCTG...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCAGGGCCTGGAGCTGGGTaGGGTTGGCACGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPGPGAG*GWHGAV
Trigger: CACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCC...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCAGGTGGATCCCGAGGCTaGACTGGCTGCCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPGGSRG*TGCPVP
Trigger: AGGGACAGGGCAGCCAGTTCAGCCTCGGGATCCACC...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR TCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTATGGCCGGGCCATTGCTaGAGCCGTTGGGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLWPGHC*SRWVCT
Trigger: CGTGCACACCCAACGGCTTCAGCAATGGCCCGGCCA...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTATGCATGGCCGTTTGCTaGGGTGCTCGGGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLCMAVC*GARGAA
Trigger: CGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCA...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLQARSR*GSSAGT
Trigger: AGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTG...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASQARSR*GSSAGT
Trigger: AGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTG...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGTGCAGGAGCTCCCGCTaGAGCAAGGGCAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATCRSSR*SKGRFA
Trigger: GGCAAACCTGCCCTTGCTGCAGCGGGAGCTCCTGCA...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCGCTGCGGGCCGTGCCTaGTGTCTGTCCTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTAAGRA*CLSLYS
Trigger: CGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGC...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACACCACGCACACAGATaGCAAGCCACGGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLHHAHR*QATGHA
Trigger: GGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTG...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCCGCCACGCGCACAGATaGCAGGCCACGGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCRHAHR*QATGHA
Trigger: GGCGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCG...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGCGACTCAGGGGCGGCTaGGCGCTGTCTTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATRLRGG*ALSSGA
Trigger: GGCGCCAGAAGACAGCGCGCAGCCGCCCCTGAGTCG...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327483.9
CDS-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGGTGTCCTCTGCCCTaGGGAGGGGGTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATGCPLP*GGGGSP
Trigger: AGGGCTCCCACCCCCTCCCCAGGGCAGAGGACACCC...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGGCACGGTGTCCAGTaGGCCAGGTGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATGHGVQ*ARWAGG
Trigger: TCCCCCAGCCCACCTGGCCCACTGGACACCGTGCCC...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCAGGAGCTGGGTGGGGTTaGCACGGTGCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYAGAGWG*HGAVSG
Trigger: GCCGGACACAGCACCGTGCCAACCCCACCCAGCTCC...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCTCAGCTTCAGGCCTCTaGCGGGCTGTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTSASGL*RAVRGW
Trigger: CCAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGA...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCCCTGTCCCTCAGTCTTaGAGCCGGCATGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASPVPQS*SRHEEG
Trigger: GCCCTCCTCATGCCGGCTTCAAGACTGAGGGACAGG...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR TCA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGGCCGCGCCCAGTGGTTaGGCTCCTCGCGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRAAPSG*APRGRP
Trigger: AGGCCGACCGCGAGGAGCTCAACCACTGGGCGCGGC...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCAAAGTCACAGGGGGCGTaGGGACAGACGGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPKSQGA*GQTACP
Trigger: AGGACACGCCGTCTGTCCTCACGCCCCCTGTGACTT...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCAGGCCCAGCACCAGTGTaGGCACGCGCTCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYAGPAPV*ARAPQS
Trigger: AGATTGGGGAGCGCGTGCGCACACTGGTGCTGGGCC...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGAGCAGGAGCTGCTCATaGTGGGCCAAGTACTGGGCG +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATSRSCS*WAKYWA
Trigger: CGCCCAGTACTTGGCCCAGCATGAGCAGCTCCTGCT...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGCTGAGGTGCTCGGGGTaGAGCGGGTCGCGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATLRCSG*SGSRSD
Trigger: GTCAGACCGCGACCCGCTGCACCCCGAGCACCTCAG...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCCACGCGCACAGATTCGCGGTCGGCCTCCTaGCACCTGCGCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: PDSHAHRCQATGHATRTDSRSAS*HLRSTV
Trigger: CACGGTGCTGCGCAGGTGCCAGGAGGCCGACCGCGA...ATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGAGCTGGGTGGGGTTaGCACGGTGCTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATGAGWG*HGAVSG
Trigger: GCCGGACACAGCACCGTGCCAACCCCACCCAGCTCC...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCGCGGGGCGCAGTGTCTaGCAGGCCAGGCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCAGRSV*QARHRR
Trigger: CCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGC...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCAAGAGGAAAAGAGAGGTaGGCAGAGCCGCCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPRGKER*AEPPRL
Trigger: CAGGCGCGGCGGCTCTGCCCACCTCTCTTTTCCTCT...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCAAACGCATCTGAGGGGTaGCTGGGCAGGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPNASEG*LGRSTR
Trigger: CCTGGTGCTCCTGCCCAGCCACCCCTCAGATGCGTT...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTCTGCTCCTTCCAGCTTaGTCCCCGCCTCCACGACTC +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPLLLPA*SPPPRL
Trigger: GAGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAG...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327483.9
CDS-3UTR TCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTGGAGTCCGGCATCGCTaGGGCCTTAGCTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPGVRHR*GLSFPV
Trigger: GACAGGAAAGCTAAGGCCTCAGCGATGCCGGACTCC...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGTGCACGGTGCACCATTaGTGGCTGTTGGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATCTVHH*WLLVSG
Trigger: GCCACTCACCAACAGCCATCAATGGTGCACCGTGCA...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCACAGCGGGTCGCGGTCTaGCCCGTTCTCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYAQRVAV*PVLFGP
Trigger: AGGACCAAAGAGAACGGGTCAGACCGCGACCCGCTG...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GGTGAGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTTGGACTCGGCTGGGAGCCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GEGPRQELARHVLDSAGSQARSR*GSSAGT
Trigger: AGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTG...GCTCCCAGCCGAGTCCAAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS-3UTR GCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATCCTGGGACCCCGGGGTaGGGAGCAGCCGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYPGTPG*GAAGRC
Trigger: GCATCTGCCGGCTGCTCCGCACCCCGGGGTCCCAGG...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR GCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCATGCAGGAGCTCCCGCTaGAGCAAGGGCAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYACRSSR*SKGRFA
Trigger: GGCAAACCTGCCCTTGCTGCAGCGGGAGCTCCTGCA...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTTCCGACACGGCTTTCTaGAGCTCCGACATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPSDTAF*SSDMAC
Trigger: GCAGGCCATGTCGGAGCTGCAGAAAGCCGTGTCGGA...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTATTCTCCCAGTCCCGATaGTGGCAGAAGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLFSQSR*WQKDPQ
Trigger: CTGCGGGTCCTTCTGCCAGCATCGGGACTGGGAGAA...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTATCCCGAGGCTGAACTaGCTGCCCTGTCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPIPRLN*LPCPSV
Trigger: GACTGAGGGACAGGGCAGCCAGTTCAGCCTCGGGAT...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTAAGCACAGGGTGCGTCTaGGACATGGAGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLSTGCV*DMEPQV
Trigger: CACCTGTGGCTCCATGTCCCAGACGCACCCTGTGCT...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTAGCCGCAGAGGGAAGTTaGTGGCCTCCTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLAAEGS*WPPEAW
Trigger: CCAAGCTTCAGGAGGCCACCAACTTCCCTCTGCGGC...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCGGGCGGGCGTCTGCTTaGCCAGGCGTGCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCGRASA*PGVHSA
Trigger: TGCACTGTGCACGCCTGGCCAAGCAGACGCCCGCCC...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGTCGCGGTCGGCCTCCTaGCACCTGCGCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRSRSAS*HLRSTV
Trigger: CACGGTGCTGCGCAGGTGCCAGGAGGCCGACCGCGA...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGGGGGAGGGGCACAGCTaGGTTCAGATCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATGEGHS*VQISSY
Trigger: ATAGCTGGAGATCTGAACCCAGCTGTGCCCCTCCCC...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCATCAGCTTCAGGCCTCTaGCGGGCTGTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYASASGL*RAVRGW
Trigger: CCAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGA...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GTCCTCAGGCACGTAGCCGGTGAGGGTCCTCGGCAGGAACTCGCGAGGCACGTCCCAGCTCCGAGCCTCTaGCCCACCAGACGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VLRHVAGEGPRQELARHVPAPSL*PTRRSE
Trigger: CTCAGAGCGTCTGGTGGGCCAGAGGCTCGGAGCTGG...GACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS-3UTR TCA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGCCCGCCACTTCCCTaGCAGGAACCATCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRRPPLP*QEPSGA
Trigger: GGCCCCAGATGGTTCCTGTCAGGGAAGTGGCGGGCG...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR TCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATCCTGCAGCCTGCGGGTaGGGCAGCCAGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYPAACG*GSQLCP
Trigger: GGGACACAGCTGGCTGCCTCACCCGCAGGCTGCAGG...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR TCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCACCTTCAGGAAGGGAATaGCAAACGGCCGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPPSGRE*QTAAEG
Trigger: TCCCTCTGCGGCCGTTTGTCATTCCCTTCCTGAAGG...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCAGCGTCCAGCAGGAGCTaGTCATGCTGGGCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYAASSRS*SCWAKY
Trigger: GTACTTGGCCCAGCATGAGCAGCTCCTGCTGGACGC...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCGTGCTTCCACTCTTCTaGCCACTCACGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTVLPLF*PLTLCE
Trigger: CTCACAGAGCGTGAGTGGGCAGAAGAGTGGAAGCAC...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGTGGTGATGAGCTCGTaGGCTTTGCGCTCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATVVMSS*ALRSAS
Trigger: GGACGCGGAGCGCAAAGCGCACGAGCTCATCACCAC...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCAGGGTTCAGGGTGCATaGCCGTTTGCTGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASRVQGA*PFAEVL
Trigger: GAGCACCTCAGCAAACGGCCATGCACCCTGAACCCT...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCACCACAAGCGGCCGATaGCGCTCTCGTAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCTTSGR*RSRSSR
Trigger: CCGGGAGCTACGAGAGCGCCATCGGCCGCTTGTGGT...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATCGGTGGGCCTGGAGCTaGGTGGGGTTGGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYRWAWS*VGLARC
Trigger: GCACCGTGCCAACCCCACCCAGCTCCAGGCCCACCG...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTGCAGCAGTGACTAATTaGTCGGCTCCCCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPAAVTN*SAPPGQ
Trigger: CTGACCTGGGGGAGCCGACCAATTAGTCACTGCTGC...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTAGCAGCAGTGACTAATTaGTCGGCTCCCCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLAAVTN*SAPPGQ
Trigger: CTGACCTGGGGGAGCCGACCAATTAGTCACTGCTGC...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGAGAGGAAAAGAGAGGTaGGCAGAGCCGCCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATRGKER*AEPPRL
Trigger: CAGGCGCGGCGGCTCTGCCCACCTCTCTTTTCCTCT...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGGGCTGGTTCAGTAGCTaGGTCACTCCCGTATTGCAC +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATGWFSS*VTPVLH
Trigger: GTGCAATACGGGAGTGACCCAGCTACTGAACCAGCC...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCACGGGCTGTTCGTGGCTaGTTCAGTAGCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPRAVRG*FSSWVT
Trigger: AGTGACCCAGCTACTGAACCAGCCACGAACAGCCCG...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGGGCTGTTCGTGGCTaGTTCAGTAGCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLRAVRG*FSSWVT
Trigger: AGTGACCCAGCTACTGAACCAGCCACGAACAGCCCG...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCTCTTGCCGTTCTCGTTaGCTTCCAGTAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTSCRSR*LPVAAL
Trigger: CAGAGCTGCTACTGGAAGTCAACGAGAACGGCAAGA...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGTCTTGCCGTTCTCGTTaGCTTCCAGTAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATSCRSR*LPVAAL
Trigger: CAGAGCTGCTACTGGAAGTCAACGAGAACGGCAAGA...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCCAGCGGGTCGCGGTCTaGCCCGTTCTCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCQRVAV*PVLFGP
Trigger: AGGACCAAAGAGAACGGGTCAGACCGCGACCCGCTG...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTTGGACTCGGCTGGGAGCCGTGGTCAGCATTCGTCGCTaGGGCGGAGAAGCAGAGACC +
Preference number: 4 (lower is better)
Translates to: RVLGRNSRGTSWTRLGAVVSIRR*GGEAET
Trigger: GGTCTCTGCTTCTCCGCCTCAGCGACGAATGCTGAC...CACGGCTCCCAGCCGAGTCCAAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS-3UTR GCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCGTTGGGTGTGCACGGTaGACCATTGATGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASVGCAR*TIDGCW
Trigger: CCAACAGCCATCAATGGTGCACCGTGCACACCCAAC...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCATGTCGCTGCCAAACTaGTGCAGTGTGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTMSLPN*CSVVRK
Trigger: CTTCCTCACCACACTGCAGCAGTTTGGCAGCGACAT...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGCAGCAAGGGCAGGTTTaGCTTCAGGAAGGGAATGAC +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATQQGQV*LQEGND
Trigger: GTCATTCCCTTCCTGAAGGCAAACCTGCCCTTGCTG...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTAGTGCTTCCACTCTTCTaGCCACTCACGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLVLPLF*PLTLCE
Trigger: CTCACAGAGCGTGAGTGGGCAGAAGAGTGGAAGCAC...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATGGACCCGCAGTAGCGTaGCGCGTTGCAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYGPAVA*RVAAAA
Trigger: TGCAGCGGCTGCAACGCGGCACGCTACTGCGGGTCC...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCCGGGCCCCGCAGGCTaGGGGCAGGTGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSPGPAG*GQVLCG
Trigger: TCCACACAGCACCTGCCCCCAGCCTGCGGGGCCCGG...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGGCAGAGGGAAGTTGGTaGCCTCCTGAAGCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATAEGSW*PPEAWN
Trigger: ATTCCAAGCTTCAGGAGGCCACCAACTTCCCTCTGC...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGCTGGAGTCCTCCTGCTaGTTGATGACCGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATLESSC*LMTVRA
Trigger: CGCCCTGACGGTCATCAACCAGCAGGAGGACTCCAG...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGGCCACCACGGCTGTaGGGCCCTGCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSRPPRL*GPAGSG
Trigger: GCCAGAGCCTGCAGGGCCCCACAGCCGTGGTGGCCG...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGGGGCACGGTGTCCAGTaGGCCAGGTGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: EFLELLIATHTDARPRATGHGVQ*ARWAGG
Trigger: TCCCCCAGCCCACCTGGCCCACTGGACACCGTGCCC...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCCGGTGGGCCTGGAGCTaGGTGGGGTTGGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFRWAWS*VGLARC
Trigger: GCACCGTGCCAACCCCACCCAGCTCCAGGCCCACCG...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCATTCAGGGAGGCCTGCTaGCTCCGCATGCTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYAFREAC*LRMLEK
Trigger: CTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAA...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGAACTCGCGAGGCACGTCTTGGACTCGGCTGGGAGCCGTGTGTGTCCTGGGCGTCTTGGACTCGGCTaGGAGCCGTGTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QELARHVLDSAGSRVCPGRLGLG*EPCVSW
Trigger: CCAGGACACACACGGCTCCCAGCCGAGTCCAAGACG...CCCAGGACACACACGGCTCCCAGCCGAGTCCAAGACGTGCCTCGCGAGTTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS-3UTR TCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCATTGATGGCTGTTGGTaGGTGGCTGCTGCCGTTCAT +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASIDGCW*VAAAVH
Trigger: ATGAACGGCAGCAGCCACTCACCAACAGCCATCAAT...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGTCTCCACCATGTCCATaGTGCAGTTCAGGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATSPPCP*CSSGGC
Trigger: ACAACCTCCTGAACTGCATCATGGACATGGTGGAGA...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGACCTGCGCAGCACCGTaGGCGAGCGCCGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EFLELLIATHTDARPRATTCAAP*ASAASS
Trigger: AGAAGACGCGGCGCTCGCTCACGGTGCTGCGCAGGT...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCGAATCATTAGGTAGCTaGGGCAGGTGCACTGAATGC +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTESLGS*GRCTEC
Trigger: GCATTCAGTGCACCTGCCTCAGCTACCTAATGATTC...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCGCTTCTGAGGATGCTTaGAGAGACGTTGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASASEDA*RDVVRR
Trigger: CCTCCTGACAACGTCTCTTCAAGCATCCTCAGAAGC...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTCTCAGTCGAGGCTTCTaGGGATGCTTGAAGAGACGT +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPLSRGF*GCLKRR
Trigger: ACGTCTCTTCAAGCATCCTCAGAAGCCTCGACTGAG...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATAGAGGCGAACGCATCTaGGGGGTGGCTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYRGERI*GVAGQE
Trigger: CTCCTGCCCAGCCACCCCTCAGATGCGTTCGCCTCT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATGGCCCAGCACCAGTGTaGGCACGCGCTCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYGPAPV*ARAPQS
Trigger: AGATTGGGGAGCGCGTGCGCACACTGGTGCTGGGCC...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGGCCAGGCGTGCACAGTaGAGGAGCTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EFLELLIATHTDARPRATARRAQ*RSSRCS
Trigger: GCTGCAGCGGGAGCTCCTGCACTGTGCACGCCTGGC...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATGCCAGGCGTGCACAGTaGAGGAGCTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNARRAQ*RSSRCS
Trigger: GCTGCAGCGGGAGCTCCTGCACTGTGCACGCCTGGC...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCGGACCCGCAGTAGCGTaGCGCGTTGCAGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFGPAVA*RVAAAA
Trigger: TGCAGCGGCTGCAACGCGGCACGCTACTGCGGGTCC...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATGTGGGGTTGGCACGGTaGTGTGTCCGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNVGLAR*CVRQAR
Trigger: CCTGGCCTGCCGGACACAGCACCGTGCCAACCCCAC...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCCTGCGGCATCTGCTCTaGTGTCTAAAGCTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASLRHLL*CLKLSR
Trigger: TCGACTGAGCTTTAGACAGCAGAGCAGATGCCGCAG...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGAGGGGCTGGGCCAGCTaGGGCGTCCTGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETRGWAS*GVLELG
Trigger: GCCCAACTCCAGGACGCCCCAGCTGGCCCAGCCCCT...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGGGGGCAGGTGCTGTGTaGACAAGGAGGCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRGAGAV*TRRLWT
Trigger: CGTCCACAGCCTCCTTGTCCACACAGCACCTGCCCC...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTGGGGGAGGAGGCGCTaGCGTCCAGCAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFWGRRR*RPAGAA
Trigger: AGCAGCTCCTGCTGGACGCCAGCGCCTCCTCCCCCA...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCCCGAGAGGTTGGAGTTaGGGCGATGGGGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCPRGWS*GDGAER
Trigger: TCTCTCAGCCCCATCGCCCCAACTCCAACCTCTCGG...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCTGCACGGTGCACCATTaGTGGCTGTTGGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCCTVHH*WLLVSG
Trigger: GCCACTCACCAACAGCCATCAATGGTGCACCGTGCA...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCATCTCCACCATGTCCATaGTGCAGTTCAGGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CQATGHATHTDARPRATPSPPCP*CSSGGC
Trigger: ACAACCTCCTGAACTGCATCATGGACATGGTGGAGA...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATCCGCGTTGCAGCCGCTaGACGTCTCACTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYPRCSR*TSHWLS
Trigger: GGAAAGCCAGTGAGACGTGCAGCGGCTGCAACGCGG...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATAGTAGCGTGCCGCGTTaGAGCCGCTGCACGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYSSVPR*SRCTSH
Trigger: GTGAGACGTGCAGCGGCTGCAACGCGGCACGCTACT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTGGCAGGTGCACTGAATaGGGTTTTGTTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPGRCTE*GFVGSV
Trigger: CACAGAACCAACAAAACCGCATTCAGTGCACCTGCC...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCACTGTTGGTGAGTGGCTaGTGCCGTTCATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYALLVSG*CRSSVC
Trigger: ACACACTGATGAACGGCAGCAGCCACTCACCAACAG...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327483.9
CDS-3UTR CCA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGGCCGCAGAGGGAAGTTaGTGGCCTCCTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRAAEGS*WPPEAW
Trigger: CCAAGCTTCAGGAGGCCACCAACTTCCCTCTGCGGC...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATAGGAGCTGCTCATGCTaGGCCAAGTACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYRSCSC*AKYWAG
Trigger: GCCCGCCCAGTACTTGGCCCAGCATGAGCAGCTCCT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATAGCATCCGGTGGGCCTaGAGCTGGGTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNSIRWA*SWVGLA
Trigger: TGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCT...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCCGAGAGGTTGGAGTTaGGGCGATGGGGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRPRGWS*GDGAER
Trigger: TCTCTCAGCCCCATCGCCCCAACTCCAACCTCTCGG...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCTCCAGATGTCCTCAGGCACGTAGCCGGTGAGGGTCCTCGGCAGGAACTCGCGGAGCTCCAGGCTTCCTaGCAGACCAGCCCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: PPDVLRHVAGEGPRQELAELQAS*QTSPCF
Trigger: AAAACACGGGCTGGTCTGCCAGGAAGCCTGGAGCTC...CGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS-3UTR TCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTTGGCCGGGCCATTGCTaGAGCCGTTGGGTGTGCACG +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSWPGHC*SRWVCT
Trigger: CGTGCACACCCAACGGCTTCAGCAATGGCCCGGCCA...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCCCCACTCACGCTCTGTaGGCTTGTGGTCGATCACTT +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCPTHAL*ACGRSL
Trigger: AAGTGATCGACCACAAGCTCACAGAGCGTGAGTGGG...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCGTTGGGTGTGCACGGTaGACCATTGATGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCVGCAR*TIDGCW
Trigger: CCAACAGCCATCAATGGTGCACCGTGCACACCCAAC...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CACACACAGATGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGAGGAGGTTGTTGAGGTaGTTCCACTCTTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: HTQMPGHGPRHAHRCQATRRLLR*FHSSAH
Trigger: GTGGGCAGAAGAGTGGAAGCACCTCAACAACCTCCT...CGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGCAGAGCCGCCGCGCCTaGGGCATCTGCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLQSRRA*GICSAV
Trigger: GACAGCAGAGCAGATGCCGCAGGCGCGGCGGCTCTG...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATGCTGCGGGCCGTGCCTaGTGTCTGTCCTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNAAGRA*CLSLYS
Trigger: CGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGC...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTGGACAAGGAGGCTGTaGACGAGGTGGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFWTRRL*TRWPGH
Trigger: ATGGCCCGGCCACCTCGTCCACAGCCTCCTTGTCCA...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATTGGACAAGGAGGCTGTaGACGAGGTGGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNWTRRL*TRWPGH
Trigger: ATGGCCCGGCCACCTCGTCCACAGCCTCCTTGTCCA...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCATGGCCTCCTGAAGCTTaGAATGAAACTCCTCGATCG +
Preference number: 4 (lower is better)
Translates to: GATAHGPRTRGGRTNAYAWPPEA*NETPRS
Trigger: CGATCGAGGAGTTTCATTCCAAGCTTCAGGAGGCCA...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATGGAAGTGGTGGGCCATaGCTATGTCCTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYGSGGP*LCPPGG
Trigger: ACCGCCTGGAGGACATAGCCATGGCCCACCACTTCC...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTAGCATCCGGTGGGCCTaGAGCTGGGTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSSIRWA*SWVGLA
Trigger: TGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCT...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CACGGCCTCTTCAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTGAGGGTGAGCCGTGTGTGTCCTaGGCCTCTCCTGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HGLFSLPPDVLRHVAGEGEPCVS*ASPVSA
Trigger: TGCTGACACAGGAGAGGCCCAGGACACACACGGCTC...ACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTGAAGAGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS-3UTR CCA 90 bp ATTCACGGCCTCTTCAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTGAGTCGCGAGGCACGTCTTaGACTCGGCTGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: IHGLFSLPPDVLRHVAGESRGTS*TRLGAV
Trigger: CACGGCTCCCAGCCGAGTCCAAGACGTGCCTCGCGA...CTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTGAAGAGGCCGTGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS-3UTR TCA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCCTCAGTCGAGGCTTCTaGGGATGCTTGAAGAGACGT +
Preference number: 4 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCLSRGF*GCLKRR
Trigger: ACGTCTCTTCAAGCATCCTCAGAAGCCTCGACTGAG...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGGCGTCCTCGGAGGCCTaGCGCTTCGCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSASSEA*RFASAR
Trigger: CCTGGCCGAGGCGAAGCGGCAGGCCTCCGAGGACGC...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATTCGCTGGAGTCCTCCTaGTGGTTGATGACCGTCAGG +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYSLESS*WLMTVR
Trigger: CCTGACGGTCATCAACCAGCAGGAGGACTCCAGCGA...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGAGTAGCGTGCCGCGTTaGAGCCGCTGCACGTCTCAC +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETSSVPR*SRCTSH
Trigger: GTGAGACGTGCAGCGGCTGCAACGCGGCACGCTACT...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATTTCTCCCAGTCCCGATaGTGGCAGAAGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNFSQSR*WQKDPQ
Trigger: CTGCGGGTCCTTCTGCCAGCATCGGGACTGGGAGAA...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTGGTGCGTCTGGGACATaGAGCCACAGGTGGATCCCG +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSGASGT*SHRWIP
Trigger: CGGGATCCACCTGTGGCTCCATGTCCCAGACGCACC...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCCTGACCCGTTCTCTTTaGTCCTGTCGGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFLTRSL*SCRASS
Trigger: GGAGGACGCCCGACAGGACCAAAGAGAACGGGTCAG...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCTGAGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCTTTCGGAGAGTGCGGCGGCGGTGTaGGCTGCGGTGGCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: AEAGALNAVLLVLCLLSESAAAV*AAVARC
Trigger: GCAACGGGCCACCGCAGCCCACACCGCCGCCGCACT...CTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATGGAAGTGGTGGGCCATaGCTATGTCCTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNGSGGP*LCPPGG
Trigger: ACCGCCTGGAGGACATAGCCATGGCCCACCACTTCC...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCCTGGAGTCCTCCTGCTaGTTGATGACCGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFLESSC*LMTVRA
Trigger: CGCCCTGACGGTCATCAACCAGCAGGAGGACTCCAG...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGCGCTGCACGTCTCACTaGCTTTCCGCCCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETRCTSH*LSARSS
Trigger: GGAACTGCGGGCGGAAAGCCAGTGAGACGTGCAGCG...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTGAGGGGCCCAGGCTGTaGGCGGCTTCGGGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCEGPRL*AASGGP
Trigger: TGGACCGCCCGAAGCCGCCCACAGCCTGGGCCCCTC...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTGTGGGCCAGGTGGGCTaGGGGAGCCGGGGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCVGQVG*GSRGEK
Trigger: CTTCTCGCCCCGGCTCCCCCAGCCCACCTGGCCCAC...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCATCTGAGGGGTGGCTaGGCAGGAGCACCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSHLRGG*AGAPGL
Trigger: TAGCCCTGGTGCTCCTGCCCAGCCACCCCTCAGATG...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATCATTTTAAGCAGCCATaGAAACGGCCGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYHFKQP*KRPWGS
Trigger: GCTGCCCCACGGCCGTTTTCATGGCTGCTTAAAATG...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR TCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACGCCGCGCCCAGTGGTTaGGCTCCTCGCGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHAAPSG*APRGRP
Trigger: AGGCCGACCGCGAGGAGCTCAACCACTGGGCGCGGC...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTGCTGCGGTGGCCCGTTaGTGGGGCTGTAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCAAVAR*WGCSAG
Trigger: CCCAGCGCTACAGCCCCAGCAACGGGCCACCGCAGC...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGTCCGACACGGCTTTCTaGAGCTCCGACATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETSDTAF*SSDMAC
Trigger: GCAGGCCATGTCGGAGCTGCAGAAAGCCGTGTCGGA...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACGCGTCCTCGGAGGCCTaGCGCTTCGCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHASSEA*RFASAR
Trigger: CCTGGCCGAGGCGAAGCGGCAGGCCTCCGAGGACGC...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGGGGGCGTCCTGGAGTTaGGCCTCTGTCCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLGASWS*ASVPGK
Trigger: CTTTCCAGGGACAGAGGCCCAACTCCAGGACGCCCC...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGAGCTTTCCTGTCCACTaGGGCTGGGCCGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLSFPVH*GWAALP
Trigger: AGGAAGGGCGGCCCAGCCCCAGTGGACAGGAAAGCT...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGGGGGCAGGTGCTGTGTaGACAAGGAGGCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLGAGAV*TRRLWT
Trigger: CGTCCACAGCCTCCTTGTCCACACAGCACCTGCCCC...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGCGCTGCACGTCTCACTaGCTTTCCGCCCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLRCTSH*LSARSS
Trigger: GGAACTGCGGGCGGAAAGCCAGTGAGACGTGCAGCG...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGGCGGGGCGCAGTGTCTaGCAGGCCAGGCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSAGRSV*QARHRR
Trigger: CCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGC...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCCACGCGCACAGATAAAGTCGCTTCTAACTaGGCACAAACCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: PDSHAHRCQATGHATRTDKVASN*AQTLCT
Trigger: GGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTT...ATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTCGAGGCACGTCTAGCTaGGGCCCTTCGGGACCGGCG +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSRGTSS*GPSGPA
Trigger: CGCCGGTCCCGAAGGGCCTCAGCTAGACGTGCCTCG...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTGGAGCAGCCGGCAGATaGCAGGAGGCCGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCGAAGR*QEAALQ
Trigger: CTGGAGAGCGGCCTCCTGGCATCTGCCGGCTGCTCC...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR GCA 90 bp GCTGAGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCTTTCGGAGGGCCGTTTGCTGAGGTaGTCGGGGTGCAGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: AEAGALNAVLLVLCLLSEGRLLR*SGCSGS
Trigger: CGACCCGCTGCACCCCGAGCACCTCAGCAAACGGCC...CTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGTTTGTTTCGGAATTATaGTCTCTCTGGGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: RCQATGHATRTDARPRATFVSEL*SLWEEN
Trigger: GTTTTCTTCCCAGAGAGAGCATAATTCCGAAACAAA...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCTGTCCTTGTACTCGGTaGAAGCATGAATTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTCPCTR*KHEFLY
Trigger: ATAAAGAAATTCATGCTTGCACCGAGTACAAGGACA...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGCGCCACGCACACAGATaGCAGGCCACGGGCCACACC +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSRHAHR*QATGHT
Trigger: GGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCG...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCCGCCACGCGCACAGATaGCAGGCCACGGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPRHAHR*QATGHA
Trigger: GGCGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCG...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGGGGTCACTCCCGTATTaGACTGAGTTCCTAGAACTC +
Preference number: 4 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRGSLPY*TEFLEL
Trigger: GAGTTCTAGGAACTCAGTGCAATACGGGAGTGACCC...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGAGGGTTCAGGGTGCATaGCCGTTTGCTGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETRVQGA*PFAEVL
Trigger: GAGCACCTCAGCAAACGGCCATGCACCCTGAACCCT...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGGCATCTCGGAAGTGGTaGGCCATGGCTATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETASRKW*AMAMSS
Trigger: GGAGGACATAGCCATGGCCCACCACTTCCGAGATGC...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCCGGCCACCACGGCTGTaGGGCCCTGCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPRPPRL*GPAGSG
Trigger: GCCAGAGCCTGCAGGGCCCCACAGCCGTGGTGGCCG...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGAGGGGCCCAGGCTGTaGGCGGCTTCGGGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPEGPRL*AASGGP
Trigger: TGGACCGCCCGAAGCCGCCCACAGCCTGGGCCCCTC...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCGGCTGGTTCAGTAGCTaGGTCACTCCCGTATTGCAC +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFGWFSS*VTPVLH
Trigger: GTGCAATACGGGAGTGACCCAGCTACTGAACCAGCC...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGTGCATGGCCGTTTGCTaGGGTGCTCGGGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSCMAVC*GARGAA
Trigger: CGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCA...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCCCACTCACGCTCTGTaGGCTTGTGGTCGATCACTT +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSPTHAL*ACGRSL
Trigger: AAGTGATCGACCACAAGCTCACAGAGCGTGAGTGGG...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGGCTTCTGAGGATGCTTaGAGAGACGTTGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EFLELLIATHTDARPRATASEDA*RDVVRR
Trigger: CCTCCTGACAACGTCTCTTCAAGCATCCTCAGAAGC...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGTTTATTACCATCATaGATATCATTTGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLRLLPS*ISFGPL
Trigger: CAGAGGTCCAAATGATATTCATGATGGTAATAAACG...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GCTGAGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCTTTCGGAGCAACTGGGTGTCCTCTaGCCTGGGGAGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AEAGALNAVLLVLCLLSEQLGVL*PGEGVG
Trigger: TCCCACCCCCTCCCCAGGGCAGAGGACACCCAGTTG...CTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR GCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACTTGAGCTTGCTGAGCTaGCGGGCCCCGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHLSLLS*RAPQAG
Trigger: CCCAGCCTGCGGGGCCCGGCAGCTCAGCAAGCTCAA...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGTCGATCACTTCTTCCTaGCGGGACCCAGGCACCACA +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLSITSS*RDPGTT
Trigger: TGTGGTGCCTGGGTCCCGGCAGGAAGAAGTGATCGA...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCAGGAGGTTGTTGAGGTaGTTCCACTCTTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFRRLLR*FHSSAH
Trigger: GTGGGCAGAAGAGTGGAAGCACCTCAACAACCTCCT...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATGGGTCACTCCCGTATTaGACTGAGTTCCTAGAACTC +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYGSLPY*TEFLEL
Trigger: GAGTTCTAGGAACTCAGTGCAATACGGGAGTGACCC...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTCTCCCGGCCACCAACTaGGTGTCCTCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSLPATN*VSSALG
Trigger: CCCCAGGGCAGAGGACACCCAGTTGGTGGCCGGGAG...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTCGGTGTGGGCTGCGGTaGCCCGTTGCTGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSRCGLR*PVAGAV
Trigger: TACAGCCCCAGCAACGGGCCACCGCAGCCCACACCG...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGGGGGAGGGGCACAGCTaGGTTCAGATCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLGEGHS*VQISSY
Trigger: ATAGCTGGAGATCTGAACCCAGCTGTGCCCCTCCCC...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGCGGGGCGCAGTGTCTGGCAGGCCAGGCATCGGAGGCCAGGCACAGCATCCGAATTATGCTCTCTCTaGGAAGAAAACTTTAGCACT +
Preference number: 4 (lower is better)
Translates to: QAGRSVWQARHRRPGTASELCSL*EENFST
Trigger: AGTGCTAAAGTTTTCTTCCCAGAGAGAGCATAATTC...GGATGCTGTGCCTGGCCTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTAAGTCACAGGGGGCGTaGGGACAGACGGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCKSQGA*GQTACP
Trigger: AGGACACGCCGTCTGTCCTCACGCCCCCTGTGACTT...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATACTCCCGTATTGCACTaGGTTCCTAGAACTCCTGAT +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYTPVLH*VPRTPD
Trigger: ATCAGGAGTTCTAGGAACTCAGTGCAATACGGGAGT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCTGTTGGTGAGTGGCTaGTGCCGTTCATCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSLLVSG*CRSSRD
Trigger: GTCTCTTGATGAACGGCAGCAGCCACTCACCAACAG...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR GCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCTTGAGCTTGCTGAGCTaGCGGGCCCCGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPLSLLS*RAPQAG
Trigger: CCCAGCCTGCGGGGCCCGGCAGCTCAGCAAGCTCAA...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGGCAGAGGGAAGTTGGTaGCCTCCTGAAGCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETAEGSW*PPEAWN
Trigger: ATTCCAAGCTTCAGGAGGCCACCAACTTCCCTCTGC...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTACCACAAGCGGCCGATaGCGCTCTCGTAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSTTSGR*RSRSSR
Trigger: CCGGGAGCTACGAGAGCGCCATCGGCCGCTTGTGGT...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTAGTTCAGGAGGTTGTTaGGGTGCTTCCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSSSGGC*GASTLL
Trigger: CAGAAGAGTGGAAGCACCTCAACAACCTCCTGAACT...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTCCGCGTTGCAGCCGCTaGACGTCTCACTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSPRCSR*TSHWLS
Trigger: GGAAAGCCAGTGAGACGTGCAGCGGCTGCAACGCGG...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCCACCACGCACACAGATaGCAAGCCACGGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPHHAHR*QATGHA
Trigger: GGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTG...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATTTTTTGGATTTCCTTTaGAGCAGAGGTGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYFLDFL*SRGVSG
Trigger: ACCGGACACACCTCTGCTCCAAAGGAAATCCAAAAA...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACCATCTGAGGGGTGGCTaGGCAGGAGCACCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHHLRGG*AGAPGL
Trigger: TAGCCCTGGTGCTCCTGCCCAGCCACCCCTCAGATG...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACAACGCATCTGAGGGGTaGCTGGGCAGGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHNASEG*LGRSTR
Trigger: CCTGGTGCTCCTGCCCAGCCACCCCTCAGATGCGTT...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CAA 72 bp GCTCAGTCGAGGCTTCTGAGGATGCTTGAAGAGACGTaGTCAGGAGGTCTCCGCGCGGAATCATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AQSRLLRMLEET*SGGLRAESLGS
Trigger: GCTACCTAATGATTCCGCGCGGAGACCTCCTGACAACGTCTCTTCAAGCATCCTCAGAAGCCTCGACTGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACGGAGTCCGGCATCGCTaGGGCCTTAGCTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHGVRHR*GLSFPV
Trigger: GACAGGAAAGCTAAGGCCTCAGCGATGCCGGACTCC...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGGAATCATTAGGTAGCTaGGGCAGGTGCACTGAATGC +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLESLGS*GRCTEC
Trigger: GCATTCAGTGCACCTGCCTCAGCTACCTAATGATTC...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTTGGAAAACGGAAATATaGAAAGTCACAGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSWKTEI*KVTGGV
Trigger: CACGCCCCCTGTGACTTTTCATATTTCCGTTTTCCA...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACAGCAGGAGCTGCTCATaGTGGGCCAAGTACTGGGCG +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHSRSCS*WAKYWA
Trigger: CGCCCAGTACTTGGCCCAGCATGAGCAGCTCCTGCT...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTTGTTTCAGGGAGGCCTaGTGGCTCCGCATGCTCGAA +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCCFREA*WLRMLE
Trigger: TTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACA...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTACATGGAGCCACAGGTaGATCCCGAGGCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCTWSHR*IPRLNW
Trigger: CCAGTTCAGCCTCGGGATCCACCTGTGGCTCCATGT...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGTGGCCTCCTGAAGCTTaGAATGAAACTCCTCGATCG +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLWPPEA*NETPRS
Trigger: CGATCGAGGAGTTTCATTCCAAGCTTCAGGAGGCCA...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATTTTTTGGATTTCCTTTaGAGCAGAGGTGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNFLDFL*SRGVSG
Trigger: ACCGGACACACCTCTGCTCCAAAGGAAATCCAAAAA...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTTCGCTGCCAAACTGCTaGAGTGTGGTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSSLPNC*SVVRKR
Trigger: GCGCTTCCTCACCACACTGCAGCAGTTTGGCAGCGA...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTTCGATCACTTCTTCCTaGCGGGACCCAGGCACCACA +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSSITSS*RDPGTT
Trigger: TGTGGTGCCTGGGTCCCGGCAGGAAGAAGTGATCGA...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACTCGCTGGAGTCCTCCTaGTGGTTGATGACCGTCAGG +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHSLESS*WLMTVR
Trigger: CCTGACGGTCATCAACCAGCAGGAGGACTCCAGCGA...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGCCTGCTGGCTCCGCATaGTCGAAAAGCAGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSPAGSA*SKSSRE
Trigger: TTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGG...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCTCGCTGCCAAACTGCTaGAGTGTGGTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPSLPNC*SVVRKR
Trigger: GCGCTTCCTCACCACACTGCAGCAGTTTGGCAGCGA...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTATGTCGCTGCCAAACTaGTGCAGTGTGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCMSLPN*CSVVRK
Trigger: CTTCCTCACCACACTGCAGCAGTTTGGCAGCGACAT...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGTGGGCACAAACCCTCTaGACCCAAATATCCCGACAC +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSWAQTL*TQISRH
Trigger: GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCA...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGATGGCTGTTGGTGAGTaGCTGCTGCCGTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSMAVGE*LLPFIK
Trigger: CTTGATGAACGGCAGCAGCCACTCACCAACAGCCAT...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CCA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGCATCTCGGAAGTGGTaGGCCATGGCTATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPASRKW*AMAMSS
Trigger: GGAGGACATAGCCATGGCCCACCACTTCCGAGATGC...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGACGGCTTCGCTGGGGCTaGCAGCACCCACAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGRLRWG*QHPQAG
Trigger: CCCTGCCTGTGGGTGCTGCCAGCCCCAGCGAAGCCG...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGACTGCGCGCTGTCTTCTaGCGCCGCACCGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGLRAVF*RRTGLR
Trigger: CCTGAGCCCGGTGCGGCGCCAGAAGACAGCGCGCAG...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327483.9
CDS-3UTR TCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTAGTTCAGGAGGTTGTTaGGGTGCTTCCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCSSGGC*GASTLL
Trigger: CAGAAGAGTGGAAGCACCTCAACAACCTCCTGAACT...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAAACCATCTGGGGCCCTaGCCTGCGCGGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGNHLGP*PARPSL
Trigger: GAGGGAAGGCCGCGCAGGGCAGGGCCCCAGATGGTT...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR GCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAGTGGGGTTGGCACGGTaGTGTGTCCGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGVGLAR*CVRQAR
Trigger: CCTGGCCTGCCGGACACAGCACCGTGCCAACCCCAC...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTCTGCGGCATCTGCTCTaGTGTCTAAAGCTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSLRHLL*CLKLSR
Trigger: TCGACTGAGCTTTAGACAGCAGAGCAGATGCCGCAG...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGATGGGGGAGGAGGCGCTaGCGTCCAGCAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGWGRRR*RPAGAA
Trigger: AGCAGCTCCTGCTGGACGCCAGCGCCTCCTCCCCCA...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAGGGCCTGGAGCTGGGTaGGGTTGGCACGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGGPGAG*GWHGAV
Trigger: CACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCC...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACCCTTTCCTACACATATaGAGACGCAGGCCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHPFLHI*RRRPEQ
Trigger: TTGCTCCGGCCTGCGTCTCCATATGTGTAGGAAAGG...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACATGGCTGTTGGTGAGTaGCTGCTGCCGTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: TKVASNWAQTLCTQISRHMAVGE*LLPFIS
Trigger: ACTGATGAACGGCAGCAGCCACTCACCAACAGCCAT...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327483.9
CDS-3UTR TCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAGTCTTGAAGCCGGCATaGGGAGGGCCACCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGVLKPA*GGPPSG
Trigger: CCCTGAGGGTGGCCCTCCTCATGCCGGCTTCAAGAC...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR TCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGATCCTCCCGTCTTCGCTaGTCAGCCTCACGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGSSRLR*SASRPW
Trigger: CCAGGGGCGTGAGGCTGATCAGCGAAGACGGGAGGA...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGAGAATCAACCCAAAAGATTGTTGGAAAACGGAAATATaGAAAGTCACAGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: ACWLRMLEKQSRINPKDCWKTEI*KVTGGV
Trigger: CACGCCCCCTGTGACTTTTCATATTTCCGTTTTCCA...ACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp TGGTTCTGTGTCTTCTTTCGGAGAGGGGCAGTAGCAGCAGTGACTAATTGGTCGACTCCCGTATTGCACTaGGTTCCTAGAACTCCTGAT +
Preference number: 4 (lower is better)
Translates to: WFCVFFRRGAVAAVTNWSTPVLH*VPRTPD
Trigger: ATCAGGAGTTCTAGGAACTCAGTGCAATACGGGAGT...CGACCAATTAGTCACTGCTGCTACTGCCCCTCTCCGAAAGAAGACACAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCGTTTATTACCATCATaGATATCATTTGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSRLLPS*ISFGPL
Trigger: CAGAGGTCCAAATGATATTCATGATGGTAATAAACG...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTTTTGTTTCGGAATTATaGTCTCTCTGGGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSFVSEL*SLWEEN
Trigger: GTTTTCTTCCCAGAGAGAGCATAATTCCGAAACAAA...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTTGTCCTTGTACTCGGTaGAAGCATGAATTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSCPCTR*KHEFLY
Trigger: ATAAAGAAATTCATGCTTGCACCGAGTACAAGGACA...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp GTCACAGGGGGCGTGAGGACAGACGGCGTGTCCTTTCCTACACATATGGAGACGGAATTATGCTCTCTCTaGGAAGAAAACTTTAGCACT +
Preference number: 4 (lower is better)
Translates to: VTGGVRTDGVSFPTHMETELCSL*EENFST
Trigger: AGTGCTAAAGTTTTCTTCCCAGAGAGAGCATAATTC...CGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGCCCCCTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGTACTCGGTGCAAGCATaGATTTCTTTATCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLYSVQA*ISLSLY
Trigger: ATAAAGGGATAAAGAAATTCATGCTTGCACCGAGTA...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAAGGAGCTGCTCATGCTaGGCCAAGTACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGRSCSC*AKYWAG
Trigger: GCCCGCCCAGTACTTGGCCCAGCATGAGCAGCTCCT...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGCCTCTACCAGGACTaGCTTTCCCGACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RESTQKIVTVLFRNYALSGLYQD*LSRPPA
Trigger: TGCAGGAGGTCGGGAAAGGCAGTCCTGGTAGAGGCC...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR GCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGCGTCCAGCAGGAGCTaGTCATGCTGGGCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: RESTQKIVTVLFRNYALSASSRS*SCWAKY
Trigger: GTACTTGGCCCAGCATGAGCAGCTCCTGCTGGACGC...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTCTGACCCGTTCTCTTTaGTCCTGTCGGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RESTQKIVTVLFRNYALSLTRSL*SCRASS
Trigger: GGAGGACGCCCGACAGGACCAAAGAGAACGGGTCAG...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGACCTTCAGGAAGGGAATaGCAAACGGCCGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGPSGRE*QTAAEG
Trigger: TCCCTCTGCGGCCGTTTGTCATTCCCTTCCTGAAGG...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp GCTGAGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCTTTCGGAGTTCTTTGTCCATTTCTaGGTAGCTCTTTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: AEAGALNAVLLVLCLLSEFFVHF*VALLPT
Trigger: TGTTGGCAAAAGAGCTACTCAGAAATGGACAAAGAA...CTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGATGTTTCAGGGAGGCCTaGTGGCTCCGCATGCTCGAA +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGCFREA*WLRMLE
Trigger: TTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACA...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGATTCAGGGAGGCCTGCTaGCTCCGCATGCTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGFREAC*LRMLEK
Trigger: CTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAA...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTCCTGCTGGCTCCGCATaGTCGAAAAGCAGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: RESTQKIVTVLFRNYALSPAGSA*SKSSRE
Trigger: TTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGG...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR TCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAATTGATGGCTGTTGGTaGGTGGCTGCTGCCGTTCAT +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGIDGCW*VAAAVH
Trigger: ATGAACGGCAGCAGCCACTCACCAACAGCCATCAAT...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGACAGCAAGGGCAGGTTTaGCTTCAGGAAGGGAATGAC +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGQQGQV*LQEGND
Trigger: GTCATTCCCTTCCTGAAGGCAAACCTGCCCTTGCTG...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGATTGGTGAGTGGCTGCTaGCGTTCATCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGLVSGC*RSSVCV
Trigger: CACACACACTGATGAACGGCAGCAGCCACTCACCAA...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327483.9
CDS-3UTR CCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTCCTTTCCTACACATATaGAGACGCAGGCCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RESTQKIVTVLFRNYALSPFLHI*RRRPEQ
Trigger: TTGCTCCGGCCTGCGTCTCCATATGTGTAGGAAAGG...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR GCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGAGGCAGGTGCACTGAATaGGGTTTTGTTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGGRCTE*GFVGSV
Trigger: CACAGAACCAACAAAACCGCATTCAGTGCACCTGCC...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTTCCGGTATCCTTGGCTaGCTAGCTAGCAAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: RESTQKIVTVLFRNYALSSGILG*LASKVV
Trigger: AACTACCTTGCTAGCTAGCCAGCCAAGGATACCGGA...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGATCCGGTATCCTTGGCTaGCTAGCTAGCAAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGSGILG*LASKVV
Trigger: AACTACCTTGCTAGCTAGCCAGCCAAGGATACCGGA...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CCA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTAAAGTCGCTTCTAACTaGGCACAAACCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: RESTQKIVTVLFRNYALSKVASN*AQTLCT
Trigger: GGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTT...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
3UTR CAA 72 bp AGCAGTCGAGAATCAACCCAAAAGATTGTCACAGTTTaGTTTCGGAATTATGCTCTCTCTGGGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: SSRESTQKIVTV*FRNYALSGKKT
Trigger: AGTTTTCTTCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCGACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS GCA 90 bp CTGCTCCTTCCAGCTTGGTCCCCGCCTCCACGACTCAGGGGCGGCTaGGCGCTGTCTTCTGGCGCCGCACCGGGCTCAGGCGCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LLLPAWSPPPRLRGG*ALSSGAAPGSGARR
Trigger: CCGCCGCGCGCCTGAGCCCGGTGCGGCGCCAGAAGACAGCGCGCAGCCGCCCCTGAGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327483.9
ENST00000564416.1
CDS GCA 90 bp GCGGGCGGCGGACGGCGCACACTCGCGACTCGGTCCGGGAGTCGCTaGTCCTTCCAGCTTGGTCCCCGCCTCCACGACTCAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: AGGGRRTLATRSGSR*SFQLGPRLHDSGAA
Trigger: AGCCGCCCCTGAGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAGCGACTCCCGGACCGAGTCGCGAGTGTGCGCCGTCCGCCGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327483.9
ENST00000564416.1
CDS-3UTR CAA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTCGCCGCGCCCAGTGGTaGAGCTCCTCGCGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPRRAQW*SSSRSA
Trigger: GGCCGACCGCGAGGAGCTCAACCACTGGGCGCGGCG...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS CCA 90 bp GGGCGGCTTCGGGCGGTCCAGGCACCGGGTCGGCCACCACGGCTGTaGGGCCCTGCAGGCTCTGGCCACACACGTGGTGATGCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GRLRAVQAPGRPPRL*GPAGSGHTRGDASP
Trigger: GGGAGAAGCATCACCACGTGTGTGGCCAGAGCCTGCAGGGCCCCACAGCCGTGGTGGCCGACCCGGTGCCTGGACCGCCCGAAGCCGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000563856.1
ENST00000563920.1
CDS GCA 90 bp TGGGCCGCCCTTCCTGGGACCCCGGGGTGCGGAGCAGCCGGCAGATaGCAGGAGGCCGCTCTCCAGCACAGGGTGCGTCTGGGACATGGA +
Preference number: 5 (lower is better)
Translates to: WAALPGTPGCGAAGR*QEAALQHRVRLGHG
Trigger: TCCATGTCCCAGACGCACCCTGTGCTGGAGAGCGGCCTCCTGGCATCTGCCGGCTGCTCCGCACCCCGGGGTCCCAGGAAGGGCGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS GCA 90 bp CCTCCAGGCGGTAGTGCGGCGGCGGTGTGGGCTGCGGTGGCCCGTTaGTGGGGCTGTAGCGCTGGGCAGGGTTCAGGGTGCATGGCCGTT +
Preference number: 5 (lower is better)
Translates to: PPGGSAAAVWAAVAR*WGCSAGQGSGCMAV
Trigger: AACGGCCATGCACCCTGAACCCTGCCCAGCGCTACAGCCCCAGCAACGGGCCACCGCAGCCCACACCGCCGCCGCACTACCGCCTGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS CCA 90 bp GGTGGGCCATGGCTATGTCCTCCAGGCGGTAGTGCGGCGGCGGTGTaGGCTGCGGTGGCCCGTTGCTGGGGCTGTAGCGCTGGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GGPWLCPPGGSAAAV*AAVARCWGCSAGQG
Trigger: ACCCTGCCCAGCGCTACAGCCCCAGCAACGGGCCACCGCAGCCCACACCGCCGCCGCACTACCGCCTGGAGGACATAGCCATGGCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS CCA 90 bp CCCGGGGGTCTGGGTGGCGGTAGGCATCTCGGAAGTGGTGGGCCATaGCTATGTCCTCCAGGCGGTAGTGCGGCGGCGGTGTGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: PGGLGGGRHLGSGGP*LCPPGGSAAAVWAA
Trigger: CGCAGCCCACACCGCCGCCGCACTACCGCCTGGAGGACATAGCCATGGCCCACCACTTCCGAGATGCCTACCGCCACCCAGACCCCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS-3UTR CAA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCGAGGTGGCCGGGCCATaGCTGAAGCCGTTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTEVAGP*LKPLGV
Trigger: CACACCCAACGGCTTCAGCAATGGCCCGGCCACCTC...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAGGGTGCATGGCCGTTaGCTGAGGTGCTCGGGGTGC +
Preference number: 5 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTRVHGR*LRCSGC
Trigger: GCACCCCGAGCACCTCAGCAAACGGCCATGCACCCT...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGAGGGCCCGCTCCATCTaGGCACGCTCCGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: RCQATGHATRTDARPRATRARSI*ARSVVM
Trigger: CATCACCACGGAGCGTGCCAAGATGGAGCGGGCCCT...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCATGGAGCTGGGTGGGGTaGGCACGGTGCTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: CQATGHATHTDARPRATPWSWVG*ARCCVR
Trigger: CCGGACACAGCACCGTGCCAACCCCACCCAGCTCCA...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS TCA 90 bp CACGTAGCCGGTGAGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTaGAACAGGGGCCGGCGTCACACAGGATGGGCCACGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: HVAGEGPRQELARHV*NRGRRHTGWATRLP
Trigger: GGGCAGCCGCGTGGCCCATCCTGTGTGACGCCGGCCCCTGTTTCAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563856.1
CDS CCA 90 bp GCGCACACTCGCGACTCGGTCCGGGAGTCGCTGCTCCTTCCAGCTTaGTCCCCGCCTCCACGACTCAGGGGCGGCTGCGCGCTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: AHTRDSVRESLLLPA*SPPPRLRGGCALSS
Trigger: AGAAGACAGCGCGCAGCCGCCCCTGAGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAGCGACTCCCGGACCGAGTCGCGAGTGTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327483.9
ENST00000564416.1
CDS-3UTR CAA 90 bp AGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTGAGCGGGGCCCTTCTTaGTGTCCTCGGCGTCGCTGT +
Preference number: 5 (lower is better)
Translates to: RPEQRHTDHAHAADAPTPERGPS*CPRRRC
Trigger: ACAGCGACGCCGAGGACACAAAGAAGGGCCCCGCTC...AGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp TGCCAGGCCACGGGCCACGCCACGCACACAGATGCCAGGCCACGGGCCACACCAATGAGCTCGTGCGCTTaGCGCTCCGCGTCCGACACG +
Preference number: 5 (lower is better)
Translates to: CQATGHATHTDARPRATPMSSCA*RSASDT
Trigger: CGTGTCGGACGCGGAGCGCAAAGCGCACGAGCTCAT...TGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCGTGGCCTGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGGAGTCCTCCTGCTGGTaGATGACCGTCAGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RCQATGHATRTDARPRATESSCW*MTVRAS
Trigger: GGACGCCCTGACGGTCATCAACCAGCAGGAGGACTC...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTACGCAAGGGTGCATGGCCGTTaGCTGAGGTGCTCGGGGTGC +
Preference number: 5 (lower is better)
Translates to: GATAHGPRTRGGRTNAYARVHGR*LRCSGC
Trigger: GCACCCCGAGCACCTCAGCAAACGGCCATGCACCCT...TGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS GCA 90 bp GCGGAGCAGCCGGCAGATGCCAGGAGGCCGCTCTCCAGCACAGGGTaGGTCTGGGACATGGAGCCACAGGTGGATCCCGAGGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: AEQPADARRPLSSTG*VWDMEPQVDPEAEL
Trigger: CAGTTCAGCCTCGGGATCCACCTGTGGCTCCATGTCCCAGACGCACCCTGTGCTGGAGAGCGGCCTCCTGGCATCTGCCGGCTGCTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS CCA 90 bp AGGCGGAGAAGCAGAGACCCTCAGGGCCTCCCAGCTCCGAGCCTCTaGCCCACCAGACGCTCTGAGCTCCAGGCTTCCTGGCAGACCAGC +
Preference number: 5 (lower is better)
Translates to: RRRSRDPQGLPAPSL*PTRRSELQASWQTS
Trigger: GCTGGTCTGCCAGGAAGCCTGGAGCTCAGAGCGTCTGGTGGGCCAGAGGCTCGGAGCTGGGAGGCCCTGAGGGTCTCTGCTTCTCCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563856.1
ENST00000566868.1
CDS-3UTR CAA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGGTGCACGGTGCACCATaGATGGCTGTTGGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: RCQATGHATRTDARPRATVHGAP*MAVGEW
Trigger: CCACTCACCAACAGCCATCAATGGTGCACCGTGCAC...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCTGGAGCTGGGTGGGGTaGGCACGGTGCTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCWSWVG*ARCCVR
Trigger: CCGGACACAGCACCGTGCCAACCCCACCCAGCTCCA...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GGCACGTCTTGGACTCGGCTGGGAGCCGTGTGTGTCCTGGGCCTCTCCTGTGTCCTCGCGAGGCACGTCTaGGACTCGGCTGGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: GTSWTRLGAVCVLGLSCVLARHV*DSAGSR
Trigger: ACGGCTCCCAGCCGAGTCCAAGACGTGCCTCGCGAG...GACACAGGAGAGGCCCAGGACACACACGGCTCCCAGCCGAGTCCAAGACGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566868.1
CDS TCA 90 bp TGGGGCTGTAGCGCTGGGCAGGGTTCAGGGTGCATGGCCGTTTGCTaGGGTGCTCGGGGTGCAGCGGGTCGCGGTCTGACCCGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: WGCSAGQGSGCMAVC*GARGAAGRGLTRSL
Trigger: AAGAGAACGGGTCAGACCGCGACCCGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCACCCTGAACCCTGCCCAGCGCTACAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS TCA 90 bp GGAGCCGTGTGTGTCCTGGGCCTCTCCTGTGTCAGCATTCGTCGCTaGGGCGGAGAAGCAGAGACCCTCAGGGCCTCCCAGCTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: GAVCVLGLSCVSIRR*GGEAETLRASQLRA
Trigger: GGCTCGGAGCTGGGAGGCCCTGAGGGTCTCTGCTTCTCCGCCTCAGCGACGAATGCTGACACAGGAGAGGCCCAGGACACACACGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563856.1
ENST00000566868.1
CDS GCA 90 bp TGGGCAGGGTTCAGGGTGCATGGCCGTTTGCTGAGGTGCTCGGGGTaGAGCGGGTCGCGGTCTGACCCGTTCTCTTTGGTCCTGTCGGGC +
Preference number: 5 (lower is better)
Translates to: WAGFRVHGRLLRCSG*SGSRSDPFSLVLSG
Trigger: GCCCGACAGGACCAAAGAGAACGGGTCAGACCGCGACCCGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCACCCTGAACCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS CCA 90 bp CAGATGCCAGGAGGCCGCTCTCCAGCACAGGGTGCGTCTGGGACATaGAGCCACAGGTGGATCCCGAGGCTGAACTGGCTGCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QMPGGRSPAQGASGT*SHRWIPRLNWLPCP
Trigger: GGGACAGGGCAGCCAGTTCAGCCTCGGGATCCACCTGTGGCTCCATGTCCCAGACGCACCCTGTGCTGGAGAGCGGCCTCCTGGCATCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS-3UTR CAA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATTGGGCGGGCGTCTGCTaGGCCAGGCGTGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYWAGVC*ARRAQC
Trigger: GCACTGTGCACGCCTGGCCAAGCAGACGCCCGCCCA...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS TCA 90 bp CGGCCTCTTCAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTAGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RPLQPSSRCPQARSR*GSSAGTREARLAEA
Trigger: GGCCTCAGCTAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTGAAGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CAGGCCTCTGGCGGGCTGTTCGTGGCTGGTTCAGTAGCTGGGTCACTCCCGTATAGGAAGCGCTTGAGCTaGCTGAGCTGCCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: QASGGLFVAGSVAGSLPYRKRLS*LSCRAP
Trigger: CGGGGCCCGGCAGCTCAGCAAGCTCAAGCGCTTCCT...ATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCCAGAGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGTGGTGAGGAAGCGCTaGAGCTTGCTGAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: PDSHAHRCQATGHATRTDVVRKR*SLLSCR
Trigger: CCGGCAGCTCAGCAAGCTCAAGCGCTTCCTCACCAC...ATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTGGGCGGGCGTCTGCTaGGCCAGGCGTGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFWAGVC*ARRAQC
Trigger: GCACTGTGCACGCCTGGCCAAGCAGACGCCCGCCCA...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGAGGGCCCGCTCCATCTaGGCACGCTCCGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRRARSI*ARSVVM
Trigger: CATCACCACGGAGCGTGCCAAGATGGAGCGGGCCCT...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS TCA 90 bp CGGCCTCTTCAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTGAAACAGGGG +
Preference number: 5 (lower is better)
Translates to: RPLQPSSRCPQARSR*GSSAGTREARLKQG
Trigger: CCCCTGTTTCAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTGAAGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563856.1
CDS CCA 90 bp GGCCGCTCTCCAGCACAGGGTGCGTCTGGGACATGGAGCCACAGGTaGATCCCGAGGCTGAACTGGCTGCCCTGTCCCTCAGTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GRSPAQGASGTWSHR*IPRLNWLPCPSVLK
Trigger: CTTCAAGACTGAGGGACAGGGCAGCCAGTTCAGCCTCGGGATCCACCTGTGGCTCCATGTCCCAGACGCACCCTGTGCTGGAGAGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS CCA 90 bp GCAAAGGACATGGGCAGGGCTGGCGGTCACATGGGCCATCCCAGATaGGTCTCTGGACTTCCTACGCGTGGCCACAACCTGGGGACAGGG +
Preference number: 5 (lower is better)
Translates to: AKDMGRAGGHMGHPR*VSGLPTRGHNLGTG
Trigger: CCCTGTCCCCAGGTTGTGGCCACGCGTAGGAAGTCCAGAGACCCATCTGGGATGGCCCATGTGACCGCCAGCCCTGCCCATGTCCTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS-3UTR CAA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGTGGGGCGTCCTGGAGTaGGGCCTCTGTCCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRWGVLE*GLCPWK
Trigger: TTTCCAGGGACAGAGGCCCAACTCCAGGACGCCCCA...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS-3UTR CAA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCTCGGGCGTCCTCCTCTaGCCGTTCTCGTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCSGVLL*PFSLTS
Trigger: GGAAGTCAACGAGAACGGCAAGAGGAGGACGCCCGA...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGCAGTTCAGGAGGTTGTaGAGGTGCTTCCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: RCQATGHATRTDARPRATQFRRL*RCFHSS
Trigger: AGAAGAGTGGAAGCACCTCAACAACCTCCTGAACTG...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCGAGGTGGCCGGGCCATaGCTGAAGCCGTTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFEVAGP*LKPLGV
Trigger: CACACCCAACGGCTTCAGCAATGGCCCGGCCACCTC...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCCACGCGCACAGATAAATCGCTGAGGCAGTaGAGAGGAGTGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PDSHAHRCQATGHATRTDKSLRQ*RGVEGG
Trigger: CCCTCCCTCCACTCCTCTCAACTGCCTCAGCGATTT...ATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS TCA 90 bp CTGGGGCTGCAGCTGAACAAGATTCCCTCGTGGTCTGAGGCTCCCTaGAGTCTGAGAAGCTCCACCCAGGGCCAGCTGTGTCCGGAGACG +
Preference number: 5 (lower is better)
Translates to: LGLQLNKIPSWSEAP*SLRSSTQGQLCPET
Trigger: CGTCTCCGGACACAGCTGGCCCTGGGTGGAGCTTCTCAGACTTCAGGGAGCCTCAGACCACGAGGGAATCTTGTTCAGCTGCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562719.5
CDS CCA 90 bp ATTGGAGCTGTGGACCTTGGACTCGGCTGGGAGCCGTGTGTGTCCTaGGCCTCTCCTGTGTCAGCATTCGTCGCTGAGGCGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: IGAVDLGLGWEPCVS*ASPVSAFVAEAEKQ
Trigger: CTGCTTCTCCGCCTCAGCGACGAATGCTGACACAGGAGAGGCCCAGGACACACACGGCTCCCAGCCGAGTCCAAGGTCCACAGCTCCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563856.1
CDS CCA 90 bp CGGTCACATGGGCCATCCCAGATGGGTCTCTGGACTTCCTACGCGTaGCCACAACCTGGGGACAGGGGCTGTGTGCAGCTGAACACACGT +
Preference number: 5 (lower is better)
Translates to: RSHGPSQMGLWTSYA*PQPGDRGCVQLNTR
Trigger: ACGTGTGTTCAGCTGCACACAGCCCCTGTCCCCAGGTTGTGGCCACGCGTAGGAAGTCCAGAGACCCATCTGGGATGGCCCATGTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS CCA 90 bp TCACGGCCTCTTCTGCAAAGGACATGGGCAGGGCTGGCGGTCACATaGGCCATCCCAGATGGGTCTCTGGACTTCCTACGCGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: SRPLLQRTWAGLAVT*AIPDGSLDFLRVAT
Trigger: TGTGGCCACGCGTAGGAAGTCCAGAGACCCATCTGGGATGGCCCATGTGACCGCCAGCCCTGCCCATGTCCTTTGCAGAAGAGGCCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS-3UTR CAA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGAGGAAGCGCTTGAGCTaGCTGAGCTGCCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLRKRLS*LSCRAP
Trigger: CGGGGCCCGGCAGCTCAGCAAGCTCAAGCGCTTCCT...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTGAGCGGGGCCCTTCTTaGTGTCCTCGGCGTCGCTGT +
Preference number: 5 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSERGPS*CPRRRC
Trigger: ACAGCGACGCCGAGGACACAAAGAAGGGCCCCGCTC...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTATGAGCTCGTGCGCTTaGCGCTCCGCGTCCGACACG +
Preference number: 5 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSMSSCA*RSASDT
Trigger: CGTGTCGGACGCGGAGCGCAAAGCGCACGAGCTCAT...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCCCCTTTATTTCCTTCTaGAAATCGCTGAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: ETQAGATAHGPRTRGGRTPFISF*KSLRQL
Trigger: CAACTGCCTCAGCGATTTCAAGAAGGAAATAAAGGG...GGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GCCACACCACGCACACAGATGCCAAGCCACGGGCCACGCCACACGCACAGATGCTCACGCTCTGTGAGCTaGTGGTCGATCACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: ATPRTQMPSHGPRHTHRCSRSVS*WSITSS
Trigger: GGAAGAAGTGATCGACCACAAGCTCACAGAGCGTGA...GCATCTGTGCGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS TCA 90 bp GCTGAAGCCGTTGGGTGTGCACGGTGCACCATTGATGGCTGTTGGTaGGTGGCTGCTGCCGTTCATCAGTGTGTGTGGCGTGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: AEAVGCARCTIDGCW*VAAAVHQCVWREGG
Trigger: CCCTCCTTCACGCCACACACACTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGTGCACCGTGCACACCCAACGGCTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327483.9
ENST00000563640.1
ENST00000569443.5
CDS-3UTR CAA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCGTGCACGGTGCACCATaGATGGCTGTTGGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFVHGAP*MAVGEW
Trigger: CCACTCACCAACAGCCATCAATGGTGCACCGTGCAC...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTTCTGACCCGTTCTCTTaGGTCCTGTCGGGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSSDPFS*VLSGVL
Trigger: GAGGACGCCCGACAGGACCAAAGAGAACGGGTCAGA...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCCGCCGCGCCCAGTGGTaGAGCTCCTCGCGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPRRAQW*SSSRSA
Trigger: GGCCGACCGCGAGGAGCTCAACCACTGGGCGCGGCG...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGGAGTCCTCCTGCTGGTaGATGACCGTCAGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLESSCW*MTVRAS
Trigger: GGACGCCCTGACGGTCATCAACCAGCAGGAGGACTC...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGAAATCGCTGAGGCAGTaGAGAGGAGTGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EFLELLIATHTDARPRATKSLRQ*RGVEGG
Trigger: CCCTCCCTCCACTCCTCTCAACTGCCTCAGCGATTT...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp AGATGCCAGGCCACGGGCCACGCCACGCGCACAGATGCCAGGCCACGGGCCACGAATCAACCCAAAAGATaGTCACAGTTTTGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: RCQATGHATRTDARPRATNQPKR*SQFCFG
Trigger: TCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT...CGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CGCACACGCGGCGGACGCACCAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTCACGCTCTGTGAGCTaGTGGTCGATCACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RTRGGRTNAYAEENKSRFSRSVS*WSITSS
Trigger: GGAAGAAGTGATCGACCACAAGCTCACAGAGCGTGA...GAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCCGCGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTAAAGATTGTCACAGTTTaGTTTCGGAATTATGCTCTC +
Preference number: 5 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLKIVTV*FRNYAL
Trigger: GAGAGCATAATTCCGAAACAAAACTGTGACAATCTT...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GGCCGGAGCAACGGCACACGGACCACGCACACGCGGCGGACGCACCAACGCCTAAATCAACCCAAAAGATaGTCACAGTTTTGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: GRSNGTRTTHTRRTHQRLNQPKR*SQFCFG
Trigger: TCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT...TAGGCGTTGGTGCGTCCGCCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS TCA 90 bp CTGCCGTTCATCAAGAGACAGACCATAGACCATTTTAAGCAGCCATaGAAACGGCCGTGGGGCAGCGTCGCAGGCCCGTCCTCTCGATGT +
Preference number: 5 (lower is better)
Translates to: LPFIKRQTIDHFKQP*KRPWGSVAGPSSRC
Trigger: ACATCGAGAGGACGGGCCTGCGACGCTGCCCCACGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTCTGTCTCTTGATGAACGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000562719.5
ENST00000569464.5
CDS-3UTR CAA 90 bp CCGAGAAGCAGTGTTTCAGGGAGGCCTGCTGGCTCCGCATGCTCGAAAAGCAGTCTCTTGCCGTTCTCGTaGACTTCCAGTAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PRSSVSGRPAGSACSKSSLLPFS*TSSSSS
Trigger: AGAGCTGCTACTGGAAGTCAACGAGAACGGCAAGAG...ACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAACACTGCTTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGATGCAGTTCAGGAGGTaGTTGAGGTGCTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: EFLELLIATHTDARPRATMQFRR*LRCFHS
Trigger: AGAGTGGAAGCACCTCAACAACCTCCTGAACTGCAT...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp TACACATATGGAGACGCAGGCCGGAGCAACGGCACACGGACCACGCACACGCGGCCCTTTATTTCCTTCTaGAAATCGCTGAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: YTYGDAGRSNGTRTTHTRPFISF*KSLRQL
Trigger: CAACTGCCTCAGCGATTTCAAGAAGGAAATAAAGGG...CCGCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS CCA 90 bp ATAAACACAGGCATCCCAGGCATGTGTGTGCAAAGCTGGGTCACGTaGTGTCACAAGTCAAAGCTTGCACTCTACCGCAGCGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: INTGIPGMCVQSWVT*CHKSKLALYRSGSP
Trigger: TGGGGAGCCGCTGCGGTAGAGTGCAAGCTTTGACTTGTGACACCACGTGACCCAGCTTTGCACACACATGCCTGGGATGCCTGTGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS-3UTR CAA 90 bp GCTGAGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCTTTCGGAGCCATTGCTGAAGCCGTaGGGTGTGCACGGTGCACCA +
Preference number: 5 (lower is better)
Translates to: AEAGALNAVLLVLCLLSEPLLKP*GVHGAP
Trigger: TGGTGCACCGTGCACACCCAACGGCTTCAGCAATGG...CTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GCTGAGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCTTTCGGAGTCGGGCGTCCTCCTCTaGCCGTTCTCGTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: AEAGALNAVLLVLCLLSESGVLL*PFSLTS
Trigger: GGAAGTCAACGAGAACGGCAAGAGGAGGACGCCCGA...CTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS TCA 90 bp GCTGAAGCCGTTGGGTGTGCACGGTGCACCATTGATGGCTGTTGGTaGGTGGCTGCTGCCGTTCATCAAGAGACAGACCATAGACCATTT +
Preference number: 5 (lower is better)
Translates to: AEAVGCARCTIDGCW*VAAAVHQETDHRPF
Trigger: AAATGGTCTATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGTGCACCGTGCACACCCAACGGCTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000562719.5
ENST00000569464.5
CDS-3UTR CAA 90 bp CAACGCCTACGCAGAAGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTCCATTGCTGAAGCCGTaGGGTGTGCACGGTGCACCA +
Preference number: 5 (lower is better)
Translates to: QRLRRREQKSLLTGHKPSPLLKP*GVHGAP
Trigger: TGGTGCACCGTGCACACCCAACGGCTTCAGCAATGG...AGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGATGCAGTTCAGGAGGTaGTTGAGGTGCTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLMQFRR*LRCFHS
Trigger: AGAGTGGAAGCACCTCAACAACCTCCTGAACTGCAT...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCTGAATGCGGTTTTGTaGGTTCTGTGTCTTCTTTCG +
Preference number: 5 (lower is better)
Translates to: EFLELLIATHTDARPRATLNAVL*VLCLLS
Trigger: CGAAAGAAGACACAGAACCAACAAAACCGCATTCAG...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CCAGGCTGCGGGCCGTGCCTGCTGTCTGTCCTTGTACTCGGTGCAAGCATGAATGCACTGAATGCGGTTTaGTTGGTTCTGTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PGCGPCLLSVLVLGASMNALNAV*LVLCLL
Trigger: AAGAAGACACAGAACCAACAAAACCGCATTCAGTGC...ATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp ACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGACACATGCTTGAAGAGACGTaGTCAGGAGGTCTCCGCGCG +
Preference number: 5 (lower is better)
Translates to: TKVASNWAQTLCTQISRHMLEET*SGGLRA
Trigger: CGCGCGGAGACCTCCTGACAACGTCTCTTCAAGCAT...GTGTCGGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS GCA 90 bp CACACACAGACACACGTTGATGGCCCTCATGCCTGTGCAGACAAGTaGATGCAAATAAACACAGGCATCCCAGGCATGTGTGTGCAAAGC +
Preference number: 5 (lower is better)
Translates to: HTQTHVDGPHACADK*MQINTGIPGMCVQS
Trigger: GCTTTGCACACACATGCCTGGGATGCCTGTGTTTATTTGCATGCACTTGTCTGCACAGGCATGAGGGCCATCAACGTGTGTCTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS CCA 90 bp TGCATGCAAATAAACACAGGCATCCCAGGCATGTGTGTGCAAAGCTaGGTCACGTGGTGTCACAAGTCAAAGCTTGCACTCTACCGCAGC +
Preference number: 5 (lower is better)
Translates to: CMQINTGIPGMCVQS*VTWCHKSKLALYRS
Trigger: GCTGCGGTAGAGTGCAAGCTTTGACTTGTGACACCACGTGACCCAGCTTTGCACACACATGCCTGGGATGCCTGTGTTTATTTGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS-3UTR CAA 90 bp GAGTTCCTAGAACTCCTGATAGCCACGCACACAGATGCCAGGCCACGGGCCACGCTTGTGTTTGCTTTTTaGGATTTCCTTTGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: EFLELLIATHTDARPRATLVFAF*DFLWSR
Trigger: TCTGCTCCAAAGGAAATCCAAAAAAGCAAACACAAG...CGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCTATCAGGAGTTCTAGGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp TTCACATTAACGTACACGCTCAGCTTCAGGCCTCTGGCGGGCTGTTCGTGGCTGCTTGTGTTTGCTTTTTaGGATTTCCTTTGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: FTLTYTLSFRPLAGCSWLLVFAF*DFLWSR
Trigger: TCTGCTCCAAAGGAAATCCAAAAAAGCAAACACAAG...CAGCCACGAACAGCCCGCCAGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGTGGTGAGGAAGCGCTaGAGCTTGCTGAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RESTQKIVTVLFRNYALSVVRKR*SLLSCR
Trigger: CCGGCAGCTCAGCAAGCTCAAGCGCTTCCTCACCAC...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTTCTGACCCGTTCTCTTaGGTCCTGTCGGGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: RESTQKIVTVLFRNYALSSDPFS*VLSGVL
Trigger: GAGGACGCCCGACAGGACCAAAGAGAACGGGTCAGA...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS GCA 90 bp TTCTCCATAGACTGTCAGCCGAGCACAGATAAACTCAAAAGCAGATaGAGTGCACACTTATTCAGACATAAGAAGGAAGGCAGGTCCGAC +
Preference number: 5 (lower is better)
Translates to: FSIDCQPSTDKLKSR*SAHLFRHKKEGRSD
Trigger: GTCGGACCTGCCTTCCTTCTTATGTCTGAATAAGTGTGCACTGCATCTGCTTTTGAGTTTATCTGTGCTCGGCTGACAGTCTATGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570046.1
CDS-3UTR CAA 90 bp AGAGAACAAAAGTCGCTTCTAACTGGGCACAAACCCTCTGCACCCAAATATCCCGCACTGAATGCGGTTTaGTTGGTTCTGTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: REQKSLLTGHKPSAPKYPALNAV*LVLCLL
Trigger: AAGAAGACACAGAACCAACAAAACCGCATTCAGTGC...GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTATGCTTGAAGAGACGTaGTCAGGAGGTCTCCGCGCG +
Preference number: 5 (lower is better)
Translates to: RESTQKIVTVLFRNYALSMLEET*SGGLRA
Trigger: CGCGCGGAGACCTCCTGACAACGTCTCTTCAAGCAT...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp GCTGAGGCAGGTGCACTGAATGCGGTTTTGTTGGTTCTGTGTCTTCTTTCGGAGAAGATTGTCACAGTTTaGTTTCGGAATTATGCTCTC +
Preference number: 5 (lower is better)
Translates to: AEAGALNAVLLVLCLLSEKIVTV*FRNYAL
Trigger: GAGAGCATAATTCCGAAACAAAACTGTGACAATCTT...CTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp AATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTGGGACTCTTGCCGTTCTCGTaGACTTCCAGTAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: NQPKRLSQFCFGIMLSLGLLPFS*TSSSSS
Trigger: AGAGCTGCTACTGGAAGTCAACGAGAACGGCAAGAG...TCCCAGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS-3UTR CAA 90 bp CGAGAATCAACCCAAAAGATTGTCACAGTTTTGTTTCGGAATTATGCTCTCTCTCTGAATGCGGTTTTGTaGGTTCTGTGTCTTCTTTCG +
Preference number: 5 (lower is better)
Translates to: RESTQKIVTVLFRNYALSLNAVL*VLCLLS
Trigger: CGAAAGAAGACACAGAACCAACAAAACCGCATTCAG...AGAGAGAGCATAATTCCGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS GCA 72 bp CCAGCTTGGTCCCCGCCTCCACGACTCAGGGGCGGCTaGGCGCTGTCTTCTGGCGCCGCACCGGGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PAWSPPPRLRGG*ALSSGAAPGSG
Trigger: GCCTGAGCCCGGTGCGGCGCCAGAAGACAGCGCGCAGCCGCCCCTGAGTCGTGGAGGCGGGGACCAAGCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327483.9
ENST00000564416.1
CDS CCA 72 bp CGCGCCCAGTGGTTGAGCTCCTCGCGGTCGGCCTCCTaGCACCTGCGCAGCACCGTGAGCGAGCGCCGCGTC +
Preference number: 6 (lower is better)
Translates to: RAQWLSSSRSAS*HLRSTVSERRV
Trigger: GACGCGGCGCTCGCTCACGGTGCTGCGCAGGTGCCAGGAGGCCGACCGCGAGGAGCTCAACCACTGGGCGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS CCA 72 bp CGCGACTCGGTCCGGGAGTCGCTGCTCCTTCCAGCTTaGTCCCCGCCTCCACGACTCAGGGGCGGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: RDSVRESLLLPA*SPPPRLRGGCA
Trigger: CGCGCAGCCGCCCCTGAGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAGCGACTCCCGGACCGAGTCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327483.9
ENST00000564416.1
CDS GCA 72 bp CTTCCTGGGACCCCGGGGTGCGGAGCAGCCGGCAGATaGCAGGAGGCCGCTCTCCAGCACAGGGTGCGTCTG +
Preference number: 6 (lower is better)
Translates to: LPGTPGCGAAGR*QEAALQHRVRL
Trigger: CAGACGCACCCTGTGCTGGAGAGCGGCCTCCTGGCATCTGCCGGCTGCTCCGCACCCCGGGGTCCCAGGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS CAA 90 bp TCCTCGGAGGCCTGCCGCTTCGCCTCGGCCAGGGCCCGCTCCATCTaGGCACGCTCCGTGGTGATGAGCTCGTGCGCTTTGCGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: SSEACRFASARARSI*ARSVVMSSCALRSA
Trigger: CGCGGAGCGCAAAGCGCACGAGCTCATCACCACGGAGCGTGCCAAGATGGAGCGGGCCCTGGCCGAGGCGAAGCGGCAGGCCTCCGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000563856.1
ENST00000563920.1
CDS CAA 90 bp GGCGCACACTCGCGACTCGGTCCGGGAGTCGCTGCTCCTTCCAGCTaGGTCCCCGCCTCCACGACTCAGGGGCGGCTGCGCGCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: GAHSRLGPGVAAPSS*VPASTTQGRLRAVF
Trigger: GAAGACAGCGCGCAGCCGCCCCTGAGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAGCGACTCCCGGACCGAGTCGCGAGTGTGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327483.9
ENST00000564416.1
CDS GCA 72 bp GCCCGCCACTTCCCTGACAGGAACCATCTGGGGCCCTaGCCTGCGCGGCCTTCCCTCGGGCCATTCCGGTTT +
Preference number: 6 (lower is better)
Translates to: ARHFPDRNHLGP*PARPSLGPFRF
Trigger: AAACCGGAATGGCCCGAGGGAAGGCCGCGCAGGGCAGGGCCCCAGATGGTTCCTGTCAGGGAAGTGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS GCA 72 bp GGACGGCGCACACTCGCGACTCGGTCCGGGAGTCGCTaGTCCTTCCAGCTTGGTCCCCGCCTCCACGACTCA +
Preference number: 6 (lower is better)
Translates to: GRRTLATRSGSR*SFQLGPRLHDS
Trigger: TGAGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAGCGACTCCCGGACCGAGTCGCGAGTGTGCGCCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327483.9
ENST00000564416.1
CDS CAA 72 bp GCCTGCCGCTTCGCCTCGGCCAGGGCCCGCTCCATCTaGGCACGCTCCGTGGTGATGAGCTCGTGCGCTTTG +
Preference number: 6 (lower is better)
Translates to: ACRFASARARSI*ARSVVMSSCAL
Trigger: CAAAGCGCACGAGCTCATCACCACGGAGCGTGCCAAGATGGAGCGGGCCCTGGCCGAGGCGAAGCGGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000563856.1
ENST00000563920.1
CDS TCA 72 bp GGTGAGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTaGAACAGGGGCCGGCGTCACACAGGATGGGCCACG +
Preference number: 6 (lower is better)
Translates to: GEGPRQELARHV*NRGRRHTGWAT
Trigger: CGTGGCCCATCCTGTGTGACGCCGGCCCCTGTTTCAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563856.1
CDS GCA 72 bp TGGGCAGGGTTCAGGGTGCATGGCCGTTTGCTGAGGTaGTCGGGGTGCAGCGGGTCGCGGTCTGACCCGTTC +
Preference number: 6 (lower is better)
Translates to: WAGFRVHGRLLR*SGCSGSRSDPF
Trigger: GAACGGGTCAGACCGCGACCCGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCACCCTGAACCCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS CCA 72 bp CTGGGTGGCGGTAGGCATCTCGGAAGTGGTGGGCCATaGCTATGTCCTCCAGGCGGTAGTGCGGCGGCGGTG +
Preference number: 6 (lower is better)
Translates to: LGGGRHLGSGGP*LCPPGGSAAAV
Trigger: CACCGCCGCCGCACTACCGCCTGGAGGACATAGCCATGGCCCACCACTTCCGAGATGCCTACCGCCACCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS TCA 72 bp AACTGGCTGCCCTGTCCCTCAGTCTTGAAGCCGGCATaGGGAGGGCCACCCTCAGGGGCCAACCTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: NWLPCPSVLKPA*GGPPSGANLEP
Trigger: GGGCTCCAGGTTGGCCCCTGAGGGTGGCCCTCCTCATGCCGGCTTCAAGACTGAGGGACAGGGCAGCCAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS TCA 72 bp CTGCGTCTTCACCTCCGCTGGGGAGTCCGGCATCGCTaGGGCCTTAGCTTTCCTGTCCACTGGGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LRLHLRWGVRHR*GLSFPVHWGWA
Trigger: GGCCCAGCCCCAGTGGACAGGAAAGCTAAGGCCTCAGCGATGCCGGACTCCCCAGCGGAGGTGAAGACGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS GCA 72 bp AGCTGTGTCCCCGTGATAATGCCGGGGCCGGAGGCCTaGAGCTGCGCCCGCCACTTCCCTGACAGGAACCAT +
Preference number: 6 (lower is better)
Translates to: SCVPVIMPGPEA*SCARHFPDRNH
Trigger: ATGGTTCCTGTCAGGGAAGTGGCGGGCGCAGCTGCAGGCCTCCGGCCCCGGCATTATCACGGGGACACAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268679.9
CDS GCA 72 bp AGAAGGACCCGCAGTAGCGTGCCGCGTTGCAGCCGCTaGACGTCTCACTGGCTTTCCGCCCGCAGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: RRTRSSVPRCSR*TSHWLSARSSS
Trigger: GCTGGAACTGCGGGCGGAAAGCCAGTGAGACGTGCAGCGGCTGCAACGCGGCACGCTACTGCGGGTCCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000563856.1
ENST00000563920.1
CDS CCA 72 bp GGAGGCCGCTCTCCAGCACAGGGTGCGTCTGGGACATaGAGCCACAGGTGGATCCCGAGGCTGAACTGGCTG +
Preference number: 6 (lower is better)
Translates to: GGRSPAQGASGT*SHRWIPRLNWL
Trigger: CAGCCAGTTCAGCCTCGGGATCCACCTGTGGCTCCATGTCCCAGACGCACCCTGTGCTGGAGAGCGGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS TCA 72 bp TTTGCTGAGGTGCTCGGGGTGCAGCGGGTCGCGGTCTaGCCCGTTCTCTTTGGTCCTGTCGGGCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: FAEVLGVQRVAV*PVLFGPVGRPP
Trigger: AGGAGGACGCCCGACAGGACCAAAGAGAACGGGTCAGACCGCGACCCGCTGCACCCCGAGCACCTCAGCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS TCA 72 bp CAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTG +
Preference number: 6 (lower is better)
Translates to: QPSSRCPQARSR*GSSAGTREARL
Trigger: CAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563856.1
CDS TCA 72 bp CTGCGTCTTCACCTCCGCTGGGGAGTCCGGCATCGCTaGGGCCTTAGCTTTCCTGTCCACTGGGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LRLHLRWGVRHR*GLSFPVHWGCS
Trigger: GCTGCAGCCCCAGTGGACAGGAAAGCTAAGGCCTCAGCGATGCCGGACTCCCCAGCGGAGGTGAAGACGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562719.5
CDS TCA 72 bp CTGCGTCTTCACCTCCGCTGGGGAGTCCGGCATCGCTaGGGCCTTAGCTTTCCTGTCCACTGGGGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: LRLHLRWGVRHR*GLSFPVHWGSQ
Trigger: CTGCGAGCCCCAGTGGACAGGAAAGCTAAGGCCTCAGCGATGCCGGACTCCCCAGCGGAGGTGAAGACGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569443.5
ENST00000569464.5
CDS GCA 72 bp GACAGGCCTCTACCAGGACTGCCTTTCCCGACCTCCTaGAGCCTTGAGGGAAAGAGGAGGGGCTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: DRPLPGLPFPTS*SLEGKRRGWAS
Trigger: GCTGGCCCAGCCCCTCCTCTTTCCCTCAAGGCTGCAGGAGGTCGGGAAAGGCAGTCCTGGTAGAGGCCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS CCA 72 bp CCAGCACAGGGTGCGTCTGGGACATGGAGCCACAGGTaGATCCCGAGGCTGAACTGGCTGCCCTGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: PAQGASGTWSHR*IPRLNWLPCPS
Trigger: TGAGGGACAGGGCAGCCAGTTCAGCCTCGGGATCCACCTGTGGCTCCATGTCCCAGACGCACCCTGTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS CCA 72 bp GATGCCAGGAGGCCGCTCTCCAGCACAGGGTGCGTCTaGGACATGGAGCCACAGGTGGATCCCGAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: DARRPLSSTGCV*DMEPQVDPEAE
Trigger: TTCAGCCTCGGGATCCACCTGTGGCTCCATGTCCCAGACGCACCCTGTGCTGGAGAGCGGCCTCCTGGCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000563640.1
CDS CCA 72 bp AGCACTTGGATAACTCTGCCGTTCCGCCTTCACCTCTaGCCCCACCCAGACGCAGCCCAGGAAGCCCCCTCG +
Preference number: 6 (lower is better)
Translates to: STWITLPFRLHL*PHPDAAQEAPS
Trigger: CGAGGGGGCTTCCTGGGCTGCGTCTGGGTGGGGCCAGAGGTGAAGGCGGAACGGCAGAGTTATCCAAGTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS TCA 72 bp CAGCCTTCCTCCAGATGTCCTCAGGCACGTAGCCGGTaGGGGTCCTCGGCAGGAACTCGCGAGGCACGTCTA +
Preference number: 6 (lower is better)
Translates to: QPSSRCPQARSR*GSSAGTREARL
Trigger: TAGACGTGCCTCGCGAGTTCCTGCCGAGGACCCTCACCGGCTACGTGCCTGAGGACATCTGGAGGAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268679.9
ENST00000327483.9
CDS GCA 72 bp TTCAGGGTGCATGGCCGTTTGCTGAGGTGCTCGGGGTaGAGCGGGTCGCGGTCTGACCCGTTCTCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: FRVHGRLLRCSG*SGSRSDPFSLV
Trigger: GACCAAAGAGAACGGGTCAGACCGCGACCCGCTGCACCCCGAGCACCTCAGCAAACGGCCATGCACCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS GCA 72 bp TCACGCTCTGTGAGCTTGTGGTCGATCACTTCTTCCTaGCGGGACCCAGGCACCACAAGCGGCCGATGGCGC +
Preference number: 6 (lower is better)
Translates to: SRSVSLWSITSS*RDPGTTSGRWR
Trigger: GCGCCATCGGCCGCTTGTGGTGCCTGGGTCCCGGCAGGAAGAAGTGATCGACCACAAGCTCACAGAGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS CCA 72 bp ATGGGCAGGGCTGGCGGTCACATGGGCCATCCCAGATaGGTCTCTGGACTTCCTACGCGTGGCCACAACCTG +
Preference number: 6 (lower is better)
Translates to: MGRAGGHMGHPR*VSGLPTRGHNL
Trigger: CAGGTTGTGGCCACGCGTAGGAAGTCCAGAGACCCATCTGGGATGGCCCATGTGACCGCCAGCCCTGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS CAA 90 bp AGGTGCTGTGTGGACAAGGAGGCTGTGGACGAGGTGGCCGGGCCATaGCTGAAGCCGTTGGGTGTGCACGGTGCACCATTGATGGCTGTT +
Preference number: 6 (lower is better)
Translates to: RCCVDKEAVDEVAGP*LKPLGVHGAPLMAV
Trigger: AACAGCCATCAATGGTGCACCGTGCACACCCAACGGCTTCAGCAATGGCCCGGCCACCTCGTCCACAGCCTCCTTGTCCACACAGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000562719.5
ENST00000569443.5
ENST00000569464.5
CDS GCA 72 bp GCAAAGCTGGGTCACGTGGTGTCACAAGTCAAAGCTTaGACTCTACCGCAGCGGCTCCCCAGGCACTGCACC +
Preference number: 6 (lower is better)
Translates to: AKLGHVVSQVKA*TLPQRLPRHCT
Trigger: GGTGCAGTGCCTGGGGAGCCGCTGCGGTAGAGTGCAAGCTTTGACTTGTGACACCACGTGACCCAGCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS CCA 72 bp CTTCTGCAAAGGACATGGGCAGGGCTGGCGGTCACATaGGCCATCCCAGATGGGTCTCTGGACTTCCTACGC +
Preference number: 6 (lower is better)
Translates to: LLQRTWAGLAVT*AIPDGSLDFLR
Trigger: GCGTAGGAAGTCCAGAGACCCATCTGGGATGGCCCATGTGACCGCCAGCCCTGCCCATGTCCTTTGCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS TCA 72 bp ACTGGGGCTGCAGCTGAACAAGATTCCCTCGTGGTCTaGGGCTCCCTGAAGTCTGAGAAGCTCCACCCAGGG +
Preference number: 6 (lower is better)
Translates to: TGAAAEQDSLVV*GSLKSEKLHPG
Trigger: CCCTGGGTGGAGCTTCTCAGACTTCAGGGAGCCTCAGACCACGAGGGAATCTTGTTCAGCTGCAGCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562719.5
CDS CAA 72 bp TGCAAAGCTGGGTCACGTGGTGTCACAAGTCAAAGCTaGCACTCTACCGCAGCGGCTCCCCAGGCACTGCAC +
Preference number: 6 (lower is better)
Translates to: CKAGSRGVTSQS*HSTAAAPQALH
Trigger: GTGCAGTGCCTGGGGAGCCGCTGCGGTAGAGTGCAAGCTTTGACTTGTGACACCACGTGACCCAGCTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS TCA 72 bp GTTGGGTGTGCACGGTGCACCATTGATGGCTGTTGGTaGGTGGCTGCTGCCGTTCATCAGTGTGTGTGGCGT +
Preference number: 6 (lower is better)
Translates to: VGCARCTIDGCW*VAAAVHQCVWR
Trigger: ACGCCACACACACTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGTGCACCGTGCACACCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327483.9
ENST00000563640.1
ENST00000569443.5
CDS CCA 72 bp GGTGTGCACGGTGCACCATTGATGGCTGTTGGTGAGTaGCTGCTGCCGTTCATCAGTGTGTGTGGCGTGAAG +
Preference number: 6 (lower is better)
Translates to: GVHGAPLMAVGE*LLPFISVCGVK
Trigger: CTTCACGCCACACACACTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGTGCACCGTGCACACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327483.9
ENST00000563640.1
ENST00000569443.5
CDS TCA 72 bp ATCAAGAGACAGACCATAGACCATTTTAAGCAGCCATaGAAACGGCCGTGGGGCAGCGTCGCAGGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: IKRQTIDHFKQP*KRPWGSVAGPS
Trigger: GGACGGGCCTGCGACGCTGCCCCACGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTCTGTCTCTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000562719.5
ENST00000569464.5
CDS TCA 72 bp GTTGGGTGTGCACGGTGCACCATTGATGGCTGTTGGTaGGTGGCTGCTGCCGTTCATCAAGAGACAGACCAT +
Preference number: 6 (lower is better)
Translates to: VGCARCTIDGCW*VAAAVHQETDH
Trigger: ATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGTGCACCGTGCACACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000562719.5
ENST00000569464.5
CDS CCA 72 bp GGTGTGCACGGTGCACCATTGATGGCTGTTGGTGAGTaGCTGCTGCCGTTCATCAAGAGACAGACCATAGAC +
Preference number: 6 (lower is better)
Translates to: GVHGAPLMAVGE*LLPFIKRQTID
Trigger: GTCTATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCAACAGCCATCAATGGTGCACCGTGCACACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000562719.5
ENST00000569464.5
CDS CCA 72 bp ACGGCCGCAGAGGGAAGTTGGTGGCCTCCTGAAGCTTaGAATGAAACTCCTCGATCGTCAATGTCGAGTTCA +
Preference number: 6 (lower is better)
Translates to: TAAEGSWWPPEA*NETPRSSMSSS
Trigger: TGAACTCGACATTGACGATCGAGGAGTTTCATTCCAAGCTTCAGGAGGCCACCAACTTCCCTCTGCGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268679.9
ENST00000327483.9
ENST00000569464.5
CDS CCA 72 bp ATAAACACAGGCATCCCAGGCATGTGTGTGCAAAGCTaGGTCACGTGGTGTCACAAGTCAAAGCTTGCACTC +
Preference number: 6 (lower is better)
Translates to: INTGIPGMCVQS*VTWCHKSKLAL
Trigger: GAGTGCAAGCTTTGACTTGTGACACCACGTGACCCAGCTTTGCACACACATGCCTGGGATGCCTGTGTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563920.1
CDS GCA 72 bp GACTGTCAGCCGAGCACAGATAAACTCAAAAGCAGATaGAGTGCACACTTATTCAGACATAAGAAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: DCQPSTDKLKSR*SAHLFRHKKEG
Trigger: GCCTTCCTTCTTATGTCTGAATAAGTGTGCACTGCATCTGCTTTTGAGTTTATCTGTGCTCGGCTGACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570046.1