RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBFA2T2 (Homo sapiens)

Ensembl gene IDs: ENSG00000078699

Ensembl transcript IDs: ENST00000342704.11, ENST00000344201.7, ENST00000346541.7, ENST00000359606.3, ENST00000375279.6, ENST00000397800.5, ENST00000471007.1, ENST00000491618.1, ENST00000492345.5, ENST00000543126.1

Found 1925 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGAAGGGCCCTGCGGAGCCGCTGGCACAGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTGGA +
Preference number: 1 (lower is better)
Translates to: LEGPCGAAGTAPTAI*AGLLSTAGHLARAG
Trigger: TCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp CCTGCGGAGCCGCTGGCACAGCCCCCACCGCAATCTGGGCAGGGCTaGTCTCGACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATG +
Preference number: 1 (lower is better)
Translates to: PAEPLAQPPPQSGQG*SRQLAIWPVLEQSM
Trigger: CATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp CCCCCACCGCAATCTGGGCAGGGCTGCTCTCGACAGCTGGCCATCTaGCCCGTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGT +
Preference number: 1 (lower is better)
Translates to: PPPQSGQGCSRQLAI*PVLEQSMLRWLFFR
Trigger: ACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp AAGAACTACAGACACTCCAGAGTTGGAAGGGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAATCTGGGCAGGGCTGCTCTCGACAGC +
Preference number: 1 (lower is better)
Translates to: KNYRHSRVGRALRSR*HSPHRNLGRAALDS
Trigger: GCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTGTAGTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp TGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCCCGCCCCAATGGTGCTCCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: CQQRLGTTQGTWIRS*ASSCLPRPNGAPPP
Trigger: AGGAGGAGGAGCACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp AGCCATGGAGGAGGCAGCTCAGGCTGGCTGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: SHGGGSSGWLPMCRE*HTGSADSKCTERLW
Trigger: CCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCCTCCATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CGCAATCTGGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTC +
Preference number: 1 (lower is better)
Translates to: RNLGRAALDSWPSGP*WNSPCSAGYSSVWF
Trigger: GAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp TTTGGTTTCACAAGAACTACAGACACTCCAGAGTTGGAAGGGCCCTaGGGAGCCGCTGGCACAGCCCCCACCGCAATCTGGGCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: FGFTRTTDTPELEGP*GAAGTAPTAIWAGL
Trigger: CAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTGTAGTTCTTGTGAAACCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp AACCAGGAAAGCCATGGAGGAGGCAGCTCAGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAG +
Preference number: 1 (lower is better)
Translates to: NQESHGGGSSGWLPM*REWHTGSADSKCTE
Trigger: CTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCCTCCATGGCTTTCCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CTAGAAATAATCTACGCAATCGGTGACCCCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGAGCACCAGCCCTGGAGCTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: LEIIYAIGDPTVTQP*LSGSARAPALELQG
Trigger: GCCCTGCAGCTCCAGGGCTGGTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATTATTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp ACTCCTGGTGACCTTCTGGCCCAAATGGGCAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCCAAGGCCAGGTGTGGACTTGTGGTG +
Preference number: 1 (lower is better)
Translates to: TPGDLLAQMGKGNPR*RERAAAKARCGLVV
Trigger: CACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp GCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCACC +
Preference number: 1 (lower is better)
Translates to: AALDSWPSGPCWNSP*SAGYSSVWFRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp GAGGAACAAACCAGGAAAGCCATGGAGGAGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGT +
Preference number: 1 (lower is better)
Translates to: EEQTRKAMEEAAQAG*PCAENGTLAPQTAS
Trigger: ACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCCTCCATGGCTTTCCTGGTTTGTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CCAACCTGCACAGCACATCCAGCAGGACAACTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGCAGAAGATGCCCACAGCGTTCCAGA +
Preference number: 1 (lower is better)
Translates to: PTCTAHPAGQLWLSR*QMEPMGRRCPQRSR
Trigger: TCTGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGATGTGCTGTGCAGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp AATCTGGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTaGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGA +
Preference number: 1 (lower is better)
Translates to: NLGRAALDSWPSGPC*NSPCSAGYSSVWFR
Trigger: TCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp GTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGA +
Preference number: 1 (lower is better)
Translates to: VSPLSRLNFHSPPGS*GAVSRGWEPRKEPG
Trigger: TCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GCACAGCACATCCAGCAGGACAACTGTGGCTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGATGCCCACAGCGTTCCAGATGTGTGT +
Preference number: 1 (lower is better)
Translates to: AQHIQQDNCGSAGAK*SPWAEDAHSVPDVC
Trigger: ACACACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGATGTGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp CGACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTTCAGACACGCTACCACCCAGTTTTC +
Preference number: 1 (lower is better)
Translates to: RQLAIWPVLEQSMLR*LFFRLVQTRYHPVF
Trigger: GAAAACTGGGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp GCCTCTTGGCGCAGCAGCCCTTTCAATCATTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCCAAGGTAGGGATGGGGCTGTCCCCA +
Preference number: 1 (lower is better)
Translates to: ASWRSSPFNHSPNAY*CFSADSKVGMGLSP
Trigger: TGGGGACAGCCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCTGCGCCAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp ATCCAGCAGGACAACTGTGGCTCAGCAGGTGCCAAATGGAGCCCATaGGCAGAAGATGCCCACAGCGTTCCAGATGTGTGTGGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: IQQDNCGSAGAKWSP*AEDAHSVPDVCGLR
Trigger: TCTCAGACCACACACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp CCTCACTTGGCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACTGGTCTCACCCTAGACATGTCTGGC +
Preference number: 1 (lower is better)
Translates to: PHLADHNVPQLISVP*RVVLSTGLTLDMSG
Trigger: GCCAGACATGTCTAGGGTGAGACCAGTGCTCAGCACCACCCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp TTGAGAAGAGTCCTGAATGCCGCCTGTTGCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCTGCTGAGGATGGAGATGGGGCCGAA +
Preference number: 1 (lower is better)
Translates to: LRRVLNAACCLPKSP*GQSVSSAEDGDGAE
Trigger: TTCGGCCCCATCTCCATCCTCAGCAGATGACACTGATTGGCCTCACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CTTCCTGCCTCCAATTCATTTCTTGCTGATGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAGTCCCTCAGCCCAAGCACTCTGTGG +
Preference number: 1 (lower is better)
Translates to: LPASNSFLADDPAAT*TGSNSQSLSPSTLW
Trigger: CCACAGAGTGCTTGGGCTGAGGGACTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGGCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp AGGAAATCCACGCTGCAGAGAGCGGGCAGCAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATGTGTCCTGTTTCCAGACAGACATTT +
Preference number: 1 (lower is better)
Translates to: RKSTLQRAGSSQGQV*TCGGKMCPVSRQTF
Trigger: AAATGTCTGTCTGGAAACAGGACACATCTTGCCACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TTGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCTGCAGAGAGCGGGCAGCAGCCAAGG +
Preference number: 1 (lower is better)
Translates to: LTLSSDELLVTFWPK*AKEIHAAESGQQPR
Trigger: CCTTGGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TGGCTTTCTTTTGTGAGCGGAGCCTTTGTAGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: WLSFVSGAFVASSGS*KATLRGLKASWRSS
Trigger: GCTGCTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCTACAAAGGCTCCGCTCACAAAAGAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp GCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTaGGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGG +
Preference number: 1 (lower is better)
Translates to: AGAGPIKLTPTDFWV*EDARGSKMESRRGR
Trigger: CCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTaGACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTT +
Preference number: 1 (lower is better)
Translates to: LPMCREWHTGSADSK*TERLWGVIIQAWTL
Trigger: AAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp TCTTGGCGCAGCAGCCCTTTCAATCATTCGCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAGGTAGGGATGGGGCTGTCCCCAACA +
Preference number: 1 (lower is better)
Translates to: SWRSSPFNHSPNAYC*FSADSKVGMGLSPT
Trigger: TGTTGGGGACAGCCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCTGCGCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCTTGGACTCTTCCTGCCTCCAATTCA +
Preference number: 1 (lower is better)
Translates to: EWHTGSADSKCTERL*GVIIQAWTLPASNS
Trigger: TGAATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp CGTGAAACCCAGCCCTCAAGAAACTCTGGGGACATCTGGCATCTTTaGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTGGCCGACCAT +
Preference number: 1 (lower is better)
Translates to: RETQPSRNSGDIWHL*SSLVPAIIPHLADH
Trigger: ATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTGGGTTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GATGTCAAGTTGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAAATCCACGCTGCAGAGAGCGGGCAG +
Preference number: 1 (lower is better)
Translates to: DVKLTLSSDELLVTF*PKWAKEIHAAESGQ
Trigger: CTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAACTTGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TCCTTGGCGGGTGGTGCTGAGCACTGGTCTCACCCTAGACATGTCTaGCTGATGGCCAGTCACATGTTGCATCTCTTTTTAGTTTCTAGG +
Preference number: 1 (lower is better)
Translates to: SLAGGAEHWSHPRHV*LMASHMLHLFLVSR
Trigger: CCTAGAAACTAAAAAGAGATGCAACATGTGACTGGCCATCAGCCAGACATGTCTAGGGTGAGACCAGTGCTCAGCACCACCCGCCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TCTGGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTaGCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTGGCGGG +
Preference number: 1 (lower is better)
Translates to: SGIFGLLWSLQSFLT*PTIMSHNSSVFLGG
Trigger: CCCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp AGCCCTCAAGAAACTCTGGGGACATCTGGCATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTCACTTGGCCGACCATAATGTCCCAC +
Preference number: 1 (lower is better)
Translates to: SPQETLGTSGIFGLL*SLQSFLTWPTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GGCCCGTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACCCAGTTTTCTGCAAACAGCTTAAAA +
Preference number: 1 (lower is better)
Translates to: GPCWNSPCSAGYSSV*FRHATTQFSANSLK
Trigger: TTTTAAGCTGTTTGCAGAAAACTGGGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAATTCATTTCTTGCTGATGACCCGGCA +
Preference number: 1 (lower is better)
Translates to: DSKCTERLWGVIIQA*TLPASNSFLADDPA
Trigger: TGCCGGGTCATCAGCAAGAAATGAATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp AAGCAAAGACGTGAAACCCAGCCCTCAAGAAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTG +
Preference number: 1 (lower is better)
Translates to: KQRRETQPSRNSGDI*HLWSSLVPAIIPHL
Trigger: CAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTGGGTTTCACGTCTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp TTAGCTCACGATGGAAAAGGTCACCTGCACCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGGAAAGAGGCAGGTAGTCAACGTTTT +
Preference number: 1 (lower is better)
Translates to: LAHDGKGHLHHHLWK*ARRCPRKEAGSQRF
Trigger: AAAACGTTGACTACCTGCCTCTTTCCTCGGGCATCGACGTGCTCATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCATCGTGAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp TACCACCATGCCAGCTCCTCTTTGCCTTTTATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCC +
Preference number: 1 (lower is better)
Translates to: YHHASSSLPFMSLQI*TVEVSPLSRLNFHS
Trigger: GGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGTTCATATTTGCAGTGACATAAAAGGCAAAGAGGAGCTGGCATGGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp ACAGTTTCCAGGACAGATGGCCATCCGGTCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAA +
Preference number: 1 (lower is better)
Translates to: TVSRTDGHPVILFSF*RAHYRTIPAVLNLQ
Trigger: TTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAATGACCGGATGGCCATCTGTCCTGGAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp ATTTTAGACTCTGGTCAGTGCACAGAAGGTGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAGCAGGGCCAATTAAACTTACTCCAA +
Preference number: 1 (lower is better)
Translates to: ILDSGQCTEGGDLNL*FKGQLEQGQLNLLQ
Trigger: TTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR TCA 90 bp ATACTAGTTGGCCAACATGCTCAGAGAAAACAGACTATCCACAACTaGGCCTCATTCTCTCTCAGATCAATCCATGTGCTGGAAACTATT +
Preference number: 1 (lower is better)
Translates to: ILVGQHAQRKQTIHN*ASFSLRSIHVLETI
Trigger: AATAGTTTCCAGCACATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: CCLPPAASSLAEHIGQSADPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: AASSLAEHIGQSADSRRWDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACACCCTAGACATGTCTaGCTGATGGCCAGTCACATG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARHPRHV*LMASHM
Trigger: CATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSAREKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCACTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACGCCCAGCCAGGACTTaGAATTCTTACAGTAAGATG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARRPART*NSYSKM
Trigger: CATCTTACTGTAAGAATTTCAAGTCCTGGCTGGGCG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTGGTATAAGCATCACTaGGTGTACACTGGGCAGCCG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQWYKHH*VYTGQP
Trigger: CGGCTGCCCAGTGTACACTCAGTGATGCTTATACCA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp TTGGCTTTCTTTTGTGAGCGGAGCCTTTGTAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LAFFCERSLCSLVRK*ESHVKGTEGLLAQQ
Trigger: CTGCTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCTACAAAGGCTCCGCTCACAAAAGAAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQTHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CAGAAGGTTTGCAAACTGAGCTTCAGTGTGGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCAGCACGAGCAGGGTGGAAGAGCATT +
Preference number: 2 (lower is better)
Translates to: QKVCKLSFSVEYCPG*QISLWAARAGWKSI
Trigger: AATGCTCTTCCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: GCPCAENGTLAPQTASAQVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: AASSLAEHIGQSADSRRWVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQNSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAATTCCAGCTGTGCTaGACCTTCAAACGCACTTGT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQFQLC*TFKRTC
Trigger: ACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCTTCTGTACCACCATaGCAGCTCCTCTTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPSVPP*QLLFAF
Trigger: AAAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGACACCAGCGCACATaGCCTATTTGGTATAAGCAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRHQRT*PIWYKH
Trigger: ATGCTTATACCAAATAGGGCATGTGCGCTGGTGTCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp ATCTGGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTaGGCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: IWHLWSSLVPAIIPH*ADHNVPQLISVPWR
Trigger: CCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCACACAGCAGAAGGTTTaGAAACTGAGCTTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATTQQKV*KLSFSV
Trigger: CACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGCTGTTGTTTCACTaGTCACACCTTACTTTAGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLLLFH*SHLTLG
Trigger: GCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CACTGGTCTCACCCTAGACATGTCTGGCTGATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCTAGGTTTCTGAAGAGCCTGCGCTTG +
Preference number: 2 (lower is better)
Translates to: HWSHPRHVWLMASHM*HLFLVSRFLKSLRL
Trigger: CAAGCGCAGGCTCTTCAGAAACCTAGAAACTAAAAAGAGATGCAACATGTGACTGGCCATCAGCCAGACATGTCTAGGGTGAGACCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFITVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFITTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMICTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAINSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp GTGGGGCTTATGTGTTCCACAGCAAAGGAACATGATTCTCTGCTGTaGTTTCACTGGTCACACCTTACTTTAGGCAATGGAAATCTAGGC +
Preference number: 2 (lower is better)
Translates to: VGLMCSTAKEHDSLL*FHWSHLTLGNGNLG
Trigger: GCCTAGATTTCCATTGCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTGGAACACATAAGCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp ATGTTGCATCTCTTTTTAGTTTCTAGGTTTCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACCACCATGCCAGCTCCTCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: MLHLFLVSRFLKSLR*TDTFCTTMPAPLCL
Trigger: AAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAGAAACCTAGAAACTAAAAAGAGATGCAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CAAAGTAAAGCATGGGTTTTCTGTCTGGAAGCTGAAGATGTCAAGTaGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: QSKAWVFCLEAEDVK*TLSSDELLVTFWPK
Trigger: TTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAAACCCATGCTTTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp TACAGTTTCCAGGACAGATGGCCATCCGGTCATTCTGTTTTCATTTaGAAGAGCTCACTACCGTACAATTCCAGCTGTGCTGAACCTTCA +
Preference number: 2 (lower is better)
Translates to: YSFQDRWPSGHSVFI*KSSLPYNSSCAEPS
Trigger: TGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAATGACCGGATGGCCATCTGTCCTGGAAACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTAGACATGTCTGGCTaGTGGCCAGTCACATGTTGC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILDMSG*WPVTCC
Trigger: GCAACATGTGACTGGCCATCAGCCAGACATGTCTAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGG +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIHHLWK*ARRCPR
Trigger: CCTCGGGCATCGACGTGCTCATTTCCAAAGATGATG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFICWNSP*SAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTACCCAGAATGATGTCTATACCCTTT +
Preference number: 2 (lower is better)
Translates to: HYRTIPAVLNLQTHL*RYPLELPRMMSIPF
Trigger: AAAGGGTATAGACATCATTCTGGGTAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp TTTATTTTAGACTCTGGTCAGTGCACAGAAGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTGGAGCAGGGCCAATTAAACTTACTC +
Preference number: 2 (lower is better)
Translates to: FILDSGQCTEGGDLN*CFKGQLEQGQLNLL
Trigger: GAGTAAGTTTAATTGGCCCTGCTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTCTCTTAGCTCACGATaGAAAAGGTCACCTGCACCA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISLSSR*KRSPAP
Trigger: TGGTGCAGGTGACCTTTTCCATCGTGAGCTAAGAGA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp GGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATTaGACGATACTAGTTGGCCAACATGCTCAGAGAAAACAGACTATC +
Preference number: 2 (lower is better)
Translates to: GGRSSAFPRDDPLNN*TILVGQHAQRKQTI
Trigger: GATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGACACCAGCGCACATaGCCTATTTGGTATAAGCAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRHQRT*PIWYKH
Trigger: ATGCTTATACCAAATAGGGCATGTGCGCTGGTGTCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSITSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTTCTAACCCAGCACTaGCCTAGAAATAATCTACGC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIFLTQH*PRNNLR
Trigger: GCGTAGATTATTTCTAGGGCAGTGCTGGGTTAGAAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFITSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp CCCTGCGGAGCCGCTGGCACAGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCC +
Preference number: 3 (lower is better)
Translates to: PCGAAGTAPTAI*AGLLSTAGHLA
Trigger: GGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp ACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCACCAGCCCTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: TQSVTPRSPNRA*ADLLEHQPWSC
Trigger: GCAGCTCCAGGGCTGGTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ACGCAAGGAACCTGGATTCGCTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGTGCTCCTCCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: TQGTWIRSCASS*LPRPNGAPPPD
Trigger: GTCAGGAGGAGGAGCACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp AGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCCCGCCCCAATGGTGCT +
Preference number: 3 (lower is better)
Translates to: RLGTTQGTWIRS*ASSCLPRPNGA
Trigger: AGCACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp GGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCCGCTGGCTATTCTTCC +
Preference number: 3 (lower is better)
Translates to: GRAALDSWPSGP*WNSPCSAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCTAGCTGCCTACCCCGC +
Preference number: 3 (lower is better)
Translates to: CCQQRLGTTQGT*IRSCASSCLPR
Trigger: GCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ATCTACGCAATCGGTGACCCCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGAGCACCAGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: IYAIGDPTVTQP*LSGSARAPALE
Trigger: CTCCAGGGCTGGTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ACAAGAACTACAGACACTCCAGAGTTGGAAGGGCCCTaGGGAGCCGCTGGCACAGCCCCCACCGCAATCTGG +
Preference number: 3 (lower is better)
Translates to: TRTTDTPELEGP*GAAGTAPTAIW
Trigger: CCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTGTAGTTCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GGAGGCAGCTCAGGCTGGCTGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGACAGCAAGTGCACAGAG +
Preference number: 3 (lower is better)
Translates to: GGSSGWLPMCRE*HTGSADSKCTE
Trigger: CTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATACCGTGAGCCGAGATaGCGCGATTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARYREPR*RDCTPA
Trigger: GGCTGGAGTGCAATCGCGCAATCTCGGCTCACGGTA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp AGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTaGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTT +
Preference number: 3 (lower is better)
Translates to: RAALDSWPSGPC*NSPCSAGYSSV
Trigger: AACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp ACGCTGCAGAGAGCGGGCAGCAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATGTGTCCTGTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: TLQRAGSSQGQV*TCGGKMCPVSR
Trigger: TCTGGAAACAGGACACATCTTGCCACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTCTGCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGCCGAGATTGCGCGATaGCACTCCAGCCTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSAEIAR*HSSLGD
Trigger: GTCTCCCAGGCTGGAGTGCAATCGCGCAATCTCGGC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GAGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTACCAACCTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: EVQEGFSDETRP*QWGQVLPTCTA
Trigger: TGCTGTGCAGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR TCA 72 bp ACCCAGCACTGCCCTAGAAATAATCTACGCAATCGGTaGCCCCACGGTCACCCAACCGTGCCTGAGCGGATC +
Preference number: 3 (lower is better)
Translates to: TQHCPRNNLRNR*PHGHPTVPERI
Trigger: GATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATTATTTCTAGGGCAGTGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ACAGCACATCCAGCAGGACAACTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGCAGAAGATGCCCACAG +
Preference number: 3 (lower is better)
Translates to: TAHPAGQLWLSR*QMEPMGRRCPQ
Trigger: CTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGATGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 72 bp CCCCAGTGTGGAGTGCCCCCACCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAACAACTTCTTGAGTCAC +
Preference number: 3 (lower is better)
Translates to: PQCGVPPPPEVD*LGLGLNNFLSH
Trigger: GTGACTCAAGAAGTTGTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGGTGGGGGCACTCCACACTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp GACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCCGTTTGGTTCAGACAC +
Preference number: 3 (lower is better)
Translates to: DSWPSGPCWNSP*SAGYSSVWFRH
Trigger: GTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp ATCCAGCAGGACAACTGTGGCTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGATGCCCACAGCGTTCCA +
Preference number: 3 (lower is better)
Translates to: IQQDNCGSAGAK*SPWAEDAHSVP
Trigger: TGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp GCCATCTGGCCCGTGCTGGAACAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTTCAGACACGCTACCAC +
Preference number: 3 (lower is better)
Translates to: AIWPVLEQSMLR*LFFRLVQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGCTTAAACAACTTCTaGAGTCACCTTCCCCACTGG +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGLNNF*SHLPHW
Trigger: CCAGTGGGGAAGGTGACTCAAGAAGTTGTTTAAGCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp CACAGCAACCACAGCCCACAAGAGCAGGCCAGGCTCTaGACACCAAACCTAAGCCTTAGCCACAGAAATGGG +
Preference number: 3 (lower is better)
Translates to: HSNHSPQEQARL*TPNLSLSHRNG
Trigger: CCCATTTCTGTGGCTAAGGCTTAGGTTTGGTGTGCAGAGCCTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACTGGTCTCACCCTAGAC +
Preference number: 3 (lower is better)
Translates to: ADHNVPQLISVP*RVVLSTGLTLD
Trigger: GTCTAGGGTGAGACCAGTGCTCAGCACCACCCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GAGAGCGGGCAGCAGCCAAGGCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGTTTCCAGACAGACATT +
Preference number: 3 (lower is better)
Translates to: ESGQQPRPGVDL*WQDVSCFQTDI
Trigger: AATGTCTGTCTGGAAACAGGACACATCTTGCCACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp AGCAGTGATGAACTCCTGGTGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCTGCAGAGAGCGGGCAG +
Preference number: 3 (lower is better)
Translates to: SSDELLVTFWPK*AKEIHAAESGQ
Trigger: CTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 3 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGGCCAGGTGTGGACTaGTGGTGGCAAGATGTGTCC +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATRPGVD*WWQDVS
Trigger: GGACACATCTTGCCACCACAAGTCCACACCTGGCCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GTCCTGAATGCCGCCTGTTGCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCTGCTGAGGATGGAGAT +
Preference number: 3 (lower is better)
Translates to: VLNAACCLPKSP*GQSVSSAEDGD
Trigger: ATCTCCATCCTCAGCAGATGACACTGATTGGCCTCACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp ACTGGCTCCGCAGACAGCAAGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCTTGGACTCTTCCTGCC +
Preference number: 3 (lower is better)
Translates to: TGSADSKCTERL*GVIIQAWTLPA
Trigger: GGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: GCPCAENGTLAPQTASAQCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 3 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp TCCAATTCATTTCTTGCTGATGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAGTCCCTCAGCCCAAGC +
Preference number: 3 (lower is better)
Translates to: SNSFLADDPAAT*TGSNSQSLSPS
Trigger: GCTTGGGCTGAGGGACTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTCATCAGCAAGAAATGAATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 72 bp CGCAGCAGCCCTTTCAATCATTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCCAAGGTAGGGATGGGG +
Preference number: 3 (lower is better)
Translates to: RSSPFNHSPNAY*CFSADSKVGMG
Trigger: CCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TTTGTGAGCGGAGCCTTTGTAGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: FVSGAFVASSGS*KATLRGLKASW
Trigger: CCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCTACAAAGGCTCCGCTCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp CAGAAGGTTTGCAAACTGAGCTTCAGTGTGGAATACTaGCCAGGTTTGCAGATCAGCCTCTGGGCAGCACGA +
Preference number: 3 (lower is better)
Translates to: QKVCKLSFSVEY*PGLQISLWAAR
Trigger: TCGTGCTGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp AGCAGCCCTTTCAATCATTCGCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAGGTAGGGATGGGGCTG +
Preference number: 3 (lower is better)
Translates to: SSPFNHSPNAYC*FSADSKVGMGL
Trigger: CAGCCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GATGGAAAAGGTCACCTGCACCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGGAAAGAGGCAGGTAGT +
Preference number: 3 (lower is better)
Translates to: DGKGHLHHHLWK*ARRCPRKEAGS
Trigger: ACTACCTGCCTCTTTCCTCGGGCATCGACGTGCTCATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GGTGGTGCTGAGCACTGGTCTCACCCTAGACATGTCTaGCTGATGGCCAGTCACATGTTGCATCTCTTTTTA +
Preference number: 3 (lower is better)
Translates to: GGAEHWSHPRHV*LMASHMLHLFL
Trigger: TAAAAAGAGATGCAACATGTGACTGGCCATCAGCCAGACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GAAACTCTGGGGACATCTGGCATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTCACTTGGCCGACCATA +
Preference number: 3 (lower is better)
Translates to: ETLGTSGIFGLL*SLQSFLTWPTI
Trigger: TATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp CAGCCCTCAAGAAACTCTGGGGACATCTGGCATCTTTaGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTG +
Preference number: 3 (lower is better)
Translates to: QPSRNSGDIWHL*SSLVPAIIPHL
Trigger: CAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp CGTGAAACCCAGCCCTCAAGAAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATT +
Preference number: 3 (lower is better)
Translates to: RETQPSRNSGDI*HLWSSLVPAII
Trigger: AATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTGGGTTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TTGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAAATCCACGCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: LTLSSDELLVTF*PKWAKEIHAAE
Trigger: CTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACCCAGTTTTCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSV*FRHATTQFSAN
Trigger: GTTTGCAGAAAACTGGGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 3 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTaGGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: GPIKLTPTDFWV*EDARGSKMESR
Trigger: CCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp GGTTTGCAGATCAGCCTCTGGGCAGCACGAGCAGGGTaGAAGAGCATTACAAAGATTCAGAAAACGAAACTG +
Preference number: 3 (lower is better)
Translates to: GLQISLWAARAG*KSITKIQKTKL
Trigger: CAGTTTCGTTTTCTGAATCTTTGTAATGCTCTTCCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTA +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLQTHL*RYPLEL
Trigger: TAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGGACTGAAGGCCTCTaGGCGCAGCAGCCCTTTCAA +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGTEGL*AQQPFQ
Trigger: TTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCCC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp TCTGGTCAGTGCACAGAAGGTGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAGCAGGGCCAATTAAAC +
Preference number: 3 (lower is better)
Translates to: SGQCTEGGDLNL*FKGQLEQGQLN
Trigger: GTTTAATTGGCCCTGCTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp TTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTaGCCGACCATAATGTCCCACAACTCATCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: FGLLWSLQSFLT*PTIMSHNSSVF
Trigger: GAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp AGGACAGATGGCCATCCGGTCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACAATTCCAGCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: RTDGHPVILFSF*RAHYRTIPAVL
Trigger: CAGCACAGCTGGAATTGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAATGACCGGATGGCCATCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAATTCATTTCTTGCTGAT +
Preference number: 3 (lower is better)
Translates to: CTERLWGVIIQA*TLPASNSFLAD
Trigger: ATCAGCAAGAAATGAATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAINTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp AACTGTGGGGCTTATGTGTTCCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCACTGGTCACACCTTAC +
Preference number: 3 (lower is better)
Translates to: NCGAYVFHSKGT*FSAVVSLVTPY
Trigger: GTAAGGTGTGACCAGTGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTGGAACACATAAGCCCCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GCCAGCTCCTCTTTGCCTTTTATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAAT +
Preference number: 3 (lower is better)
Translates to: ASSSLPFMSLQI*TVEVSPLSRLN
Trigger: ATTCAGCCTGCTTAGAGGACTGACCTCTACAGTTCATATTTGCAGTGACATAAAAGGCAAAGAGGAGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ATGGTACTGACAACTTTTATTTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTAAACTTGTGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: MVLTTFILDSGQ*TEGGDLNLCFK
Trigger: TTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAAGTTGTCAGTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 72 bp TTAGGCAATGGAAATCTAGGCATTTTAAAGGTGTCGTaGACTAGATTTCTTTGTAAGACTGAAAATGCTTGG +
Preference number: 3 (lower is better)
Translates to: LGNGNLGILKVS*TRFLCKTENAW
Trigger: CCAAGCATTTTCAGTCTTACAAAGAAATCTAGTGCACGACACCTTTAAAATGCCTAGATTTCCATTGCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSACSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAGACACCACCACCGCTaGTGTCGCCGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARRHHHR*CRRRRR
Trigger: GCGGCGGCGACGGCGACAGCAGCGGTGGTGGTGTCT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342704.11
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCCGCCCGAGCGCAGTaGAGCAGTTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVAARAQ*SSSRCS
Trigger: GCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSADETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTACTGGGATGGGGTCTaGTTGGCCGCCCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVYWDGV*LAARAQ
Trigger: CTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAFRAPP*ATLTSQ
Trigger: CTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCTCCCAGGGCTGTGCTaGCTGGAGACCAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWLPGLC*LETNSV
Trigger: GACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSADSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGGAGTGAAGGACACTaGCCTCGGTCCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARSEGH*PRSSRI
Trigger: AATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGAATCTCTGTGGCGGTaGTGGGGCACCATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAESLWR*WGTIQG
Trigger: ACCCTGAATGGTGCCCCATCACCGCCACAGAGATTC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGTGCTCCAGCCTGAGTaGCAGGGTGAGACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQVLQPE*QGETLS
Trigger: GGAAAGGGTCTCACCCTGTCACTCAGGCTGGAGCAC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCGTCGCCGCGAGATCTaGAGCCGCCGAGCTAACCAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRRREI*SRRANQ
Trigger: CTGGTTAGCTCGGCGGCTGCAGATCTCGCGGCGACG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342704.11
ENST00000375279.6
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSCSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGCCGCCCGAGCGCAGTaGAGCAGTTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSAARAQ*SSSRCS
Trigger: GCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACAGCGCCGCAGAACTaGCATAGAGCGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATAPQN*HRAPCF
Trigger: AAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGTATCGCGCGATATTaGAGCCACTGCATGTCTCGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASIARY*SHCMSR
Trigger: GCGAGACATGCAGTGGCTGCAATATCGCGCGATACT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCGCTCCCAGTCCTTGTaGTGGCAGAAAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARSQSL*WQKEPQ
Trigger: CTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGTGGAGGGGTAGGATaGAATTGGCCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGGGVG*NWPPGF
Trigger: GAATCCCGGGGGCCAATTCCATCCTACCCCTCCACC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCACGGTGCAGGCAAGTaGGGACAAAAAGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAHGAGK*GQKGQA
Trigger: TGCTTGTCCTTTTTGTCCCCACTTGCCTGCACCGTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAASSGS*KATLRG
Trigger: TCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAAAACCCCACCTGCTaGAAGGCGGCCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQNPTC*KAAAPG
Trigger: CCCTGGAGCGGCCGCCTTCCAGCAGGTGGGGTTTTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375279.6
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGAATCTCTGTGGCGGTaGTGGGGCACCATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWESLWR*WGTIQG
Trigger: ACCCTGAATGGTGCCCCATCACCGCCACAGAGATTC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGGCAGGACCATTGCTaGATCTCTGTGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARQDHC*ISVAVM
Trigger: CATCACCGCCACAGAGATTCAGCAATGGTCCTGCCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGAAGGTGTTCGTGCTaGGCCAGGTACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRRCSC*ARYWDG
Trigger: CCCATCCCAGTACCTGGCTCAGCACGAACACCTTCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGAAGGTGTTCGTGCTaGGCCAGGTACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRRCSC*ARYWDG
Trigger: CCCATCCCAGTACCTGGCTCAGCACGAACACCTTCT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGAAGGTGTTCGTGCTaGGCCAGGTACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRRCSC*ARYWDG
Trigger: CCCATCCCAGTACCTGGCTCAGCACGAACACCTTCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVLHEQL*RVSRRC
Trigger: GCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGGCAGAGGCCCTCGTaGCTTCTGTGTGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGQRPS*LLCETD
Trigger: GTCAGTTTCACACAGAAGTCACGAGGGCCTCTGCCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAATCTACGCAATCGGTaGCCCCACGGTCACCCAACC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVNLRNR*PHGHPT
Trigger: GGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTACTGGGATGGGGTCTaGTTGGCCGCCCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPYWDGV*LAARAQ
Trigger: CTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCCTTCTGTACCACCATaGCAGCTCCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAPSVPP*QLLFAF
Trigger: AAAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGTCGAGCACCACAAGTaGCTGGCAATTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAVEHHK*LAIADL
Trigger: CAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGAC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGGGTAGGATGGAATTaGCCCCCGGGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGVGWN*PPGFMR
Trigger: CCTCATGAATCCCGGGGGCCAATTCCATCCTACCCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTTGGGCAGCCAACATaGGAAGATCGCTTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAFGQPT*EDRFSP
Trigger: TGGGCTAAAGCGATCTTCCCATGTTGGCTGCCCAAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTGGCATGGTGGGAGGTaGGGATCTGGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAWHGGR*GSGLYL
Trigger: AAGATACAGTCCAGATCCTCACCTCCCACCATGCCA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGTTCCCGATACAGGTaGGAAGTTGCAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGSRYR*EVAISS
Trigger: AGAGGATATTGCAACTTCTCACCTGTATCGGGAACC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGAGTTCTTCACGATCTaGTTCCTGACAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGEFFTI*FLTAPQ
Trigger: CTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTCTGAGAATCATTGCTaGGAGAATCTGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASENHC*ENLHSQ
Trigger: CTGGGAGTGCAGATTCTCTCAGCAATGATTCTCAGA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTACCTGGCCTGCTGTTaGACTCTCTCTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAYLACC*TLSENH
Trigger: ATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQTRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCATGGTCTCGATCTCTTaGCCTCGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSMVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAAGAGATCGAGACCAT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSCSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACAGCGCCGCAGAACTaGCATAGAGCGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATAPQN*HRAPCF
Trigger: AAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACTCCCAGGGCTGTGCTaGCTGGAGACCAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGLPGLC*LETNSV
Trigger: GACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVTSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATSAMV*SIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASVDSS*SLMTRK
Trigger: TTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWPPEVD*LGLGLN
Trigger: GTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPPEVD*LGLGLN
Trigger: GTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTATTGCTGCTTCTCTaGCGACTCCAAGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALLLLL*RLQGRD
Trigger: ATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTGGGAGGTGAGGATCTaGACTGTATCTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAWEVRI*TVSSLP
Trigger: TGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTCCAGGATTTATTGGTaGGAGGGGTGGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSRIYW*EGWHGG
Trigger: CCCACCATGCCACCCCTCCCACCAATAAATCCTGGA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTCCAGGATTTATTGGTaGGAGGGGTGGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSRIYW*EGWHGG
Trigger: CCCACCATGCCACCCCTCCCACCAATAAATCCTGGA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQLSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTCACTGAGTGTACACTaGGCAGCCGTAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSLSVH*AAVGST
Trigger: GGTCGAGCCTACGGCTGCCCAGTGTACACTCAGTGA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAASSGS*KATLRG
Trigger: TCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAGGCAAGTGAGAAGGTaGAGGTGCCTCTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSRQVRR*RCLWGI
Trigger: GATGCCCCAGAGGCACCTCCACCTTCTCACTTGCCT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTGGCATGGTGGGAGGTaGGGATCTGGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQWHGGR*GSGLYL
Trigger: AAGATACAGTCCAGATCCTCACCTCCCACCATGCCA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTGCGGCCTGCCGCTTaGCATCCGCTATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLRPAA*HPLWFA
Trigger: AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGHHLWK*ARRCPR
Trigger: CCTCGGGCATCGACGTGCTCATTTCCAAAGATGATG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWHHLWK*ARRCPR
Trigger: CCTCGGGCATCGACGTGCTCATTTCCAAAGATGATG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGGTCGAGGCTGCAGTaGGCTGTGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRSRLQ*AVITPL
Trigger: CAGTGGTGTGATCACAGCTCACTGCAGCCTCGACCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTACTGGGATGGGGTCTaGTTGGCCGCCCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSYWDGV*LAARAQ
Trigger: CTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCGAGTCAGCAGGCGATaGAATGCTTGTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRVSRR*NACVEQ
Trigger: CTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCGAGTCAGCAGGCGATaGAATGCTTGTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWRVSRR*NACVEQ
Trigger: CTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCGATATTGCAGCCACTaGATGTCTCGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRYCSH*MSRWLC
Trigger: GCAAAGCCAGCGAGACATGCAGTGGCTGCAATATCG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGTATCGCGCGATATTaGAGCCACTGCATGTCTCGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSIARY*SHCMSR
Trigger: GCGAGACATGCAGTGGCTGCAATATCGCGCGATACT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCGCTCCCAGTCCTTGTaGTGGCAGAAAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRSQSL*WQKEPQ
Trigger: CTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGGAACGCGATGTGGTTaGCGAGGTCTTGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPGTRCG*RGLVEG
Trigger: GCCCTCGACAAGACCTCGGCAACCACATCGCGTTCC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSTVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWCWNSP*SAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVCWNSP*SAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACCAGCTCTTCACCTTaGCAGAATCCCCAGATACAG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATSSSP*QNPQIQ
Trigger: CTGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTCCTCCAGGATTTATTaGTGGGAGGGGTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSSRIY*WEGWHG
Trigger: ACCATGCCACCCCTCCCACCAATAAATCCTGGAGGA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTCTTCTCTCCTCTCTaGACTGGGCCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLFSPL*TGPLPI
Trigger: AATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCACCCTAGACATGTCTaGCTGATGGCCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQHPRHV*LMASHM
Trigger: CATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCACGGTGCAGGCAAGTaGGGACAAAAAGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWHGAGK*GQKGQA
Trigger: TGCTTGTCCTTTTTGTCCCCACTTGCCTGCACCGTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLLVTF*PKWAKE
Trigger: TTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQASSGS*KATLRG
Trigger: TCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVASSGS*KATLRG
Trigger: TCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCAATTGCTGATTTGTaGGTGCAGATGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAAIADL*VQMMWR
Trigger: CCTCCACATCATCTGCACTCACAAATCAGCAATTGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAGCGTTTCAACTTGCTaGGTTGTCGAGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSVSTC*VVEHHK
Trigger: CTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGGGCAGGTTGGCCTTaGGAAATGGAATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGAGWP*EMESQK
Trigger: CTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCAGAAGGTGTTCGTGCTaGGCCAGGTACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRRRCSC*ARYWDG
Trigger: CCCATCCCAGTACCTGGCTCAGCACGAACACCTTCT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCATGCAATGCTTGTGTTaGGCAGAAGGTGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAMQCLC*AEGVRA
Trigger: AGCACGAACACCTTCTGCTCAACACAAGCATTGCAT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGTTCCCGATACAGGTaGGAAGTTGCAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGSRYR*EVAISS
Trigger: AGAGGATATTGCAACTTCTCACCTGTATCGGGAACC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTGCGGCCTGCCGCTTaGCATCCGCTATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLRPAA*HPLWFA
Trigger: AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGCGGCCTGCCGCTTaGCATCCGCTATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLRPAA*HPLWFA
Trigger: AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTGCGGCCTGCCGCTTaGCATCCGCTATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLRPAA*HPLWFA
Trigger: AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSLASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARTHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGTHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGGCAGAGGCCCTCGTaGCTTCTGTGTGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGQRPS*LLCETD
Trigger: GTCAGTTTCACACAGAAGTCACGAGGGCCTCTGCCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGGATTCTTGAAATGTaGATAGAAGGTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGILEM*IEGPGQ
Trigger: CTGCCCAGGACCTTCTATTCACATTTCAAGAATCCC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGACAAGCAAAGACGTaGAACCCAGCCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGQAKT*NPALKK
Trigger: TTTCTTGAGGGCTGGGTTTCACGTCTTTGCTTGTCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGACAAGCAAAGACGTaGAACCCAGCCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGQAKT*NPALKK
Trigger: TTTCTTGAGGGCTGGGTTTCACGTCTTTGCTTGTCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSHHLWK*ARRCPR
Trigger: CCTCGGGCATCGACGTGCTCATTTCCAAAGATGATG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTTTAGCCCAGGAGTTTaGGACCCACCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSFSPGV*DPPGQH
Trigger: ATGTTGCCCAGGTGGGTCTCAAACTCCTGGGCTAAA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCGTCGCCGCGAGATCTaGAGCCGCCGAGCTAACCAG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERRRREI*SRRANQ
Trigger: CTGGTTAGCTCGGCGGCTGCAGATCTCGCGGCGACG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342704.11
ENST00000375279.6
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERCSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGCCGCCCGAGCGCAGTaGAGCAGTTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIAARAQ*SSSRCS
Trigger: GCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTACTGGGATGGGGTCTaGTTGGCCGCCCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQYWDGV*LAARAQ
Trigger: CTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTCCCAGGGCTGTGCTaGCTGGAGACCAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLPGLC*LETNSV
Trigger: GACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCATTGCTGAGAGAATCTaGACTCCCAGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSIAERI*TPRAVL
Trigger: CAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAAT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASVDSS*SLMTRK
Trigger: TTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGGAACGCGATGTGGTTaGCGAGGTCTTGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLGTRCG*RGLVEG
Trigger: GCCCTCGACAAGACCTCGGCAACCACATCGCGTTCC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCTTCTGTACCACCATaGCAGCTCCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPSVPP*QLLFAF
Trigger: AAAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCATGAGTCAGGCACGGTaGAGGCAAGTGGGGACAAAA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSMSQAR*RQVGTK
Trigger: TTTTGTCCCCACTTGCCTGCACCGTGCCTGACTCAT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGTAATCTCTGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGVISAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATTAC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGGAGTGAAGGACACTaGCCTCGGTCCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRSEGH*PRSSRI
Trigger: AATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGTCGAGCACCACAAGTaGCTGGCAATTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVVEHHK*LAIADL
Trigger: CAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGAC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCTCTTCTCTCCTCTCTaGACTGGGCCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSLFSPL*TGPLPI
Trigger: AATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGTGGAGGGGTAGGATaGAATTGGCCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGGGVG*NWPPGF
Trigger: GAATCCCGGGGGCCAATTCCATCCTACCCCTCCACC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWALASC*VPDTGE
Trigger: CTCACCTGTATCGGGAACCCAACAAGATGCTAGAGC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCACCCTAGACATGTCTaGCTGATGGCCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSHPRHV*LMASHM
Trigger: CATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCANSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGTGTGGACTTGTGGTaGCAAGATGTGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGVDLW*QDVSCF
Trigger: GAAACAGGACACATCTTGCCACCACAAGTCCACACC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGTGTGGACTTGTGGTaGCAAGATGTGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGVDLW*QDVSCF
Trigger: GAAACAGGACACATCTTGCCACCACAAGTCCACACC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGTGTGGACTTGTGGTaGCAAGATGTGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGVDLW*QDVSCF
Trigger: GAAACAGGACACATCTTGCCACCACAAGTCCACACC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVTFWPK*AKEIHA
Trigger: AGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGTFWPK*AKEIHA
Trigger: AGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTFWPK*AKEIHA
Trigger: AGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWLRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCTCTTAGCTCACGATaGAAAAGGTCACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASLSSR*KRSPAP
Trigger: TGGTGCAGGTGACCTTTTCCATCGTGAGCTAAGAGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCACTGAGTGTACACTaGGCAGCCGTAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSLSVH*AAVGST
Trigger: GGTCGAGCCTACGGCTGCCCAGTGTACACTCAGTGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCCTCCTTTCATTAGCTaGACATGTGTCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAPPFIS*TCVSSL
Trigger: GAGAGAGCTGACACATGTCCAGCTAATGAAAGGAGG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGAATCTCTGTGGCGGTaGTGGGGCACCATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLESLWR*WGTIQG
Trigger: ACCCTGAATGGTGCCCCATCACCGCCACAGAGATTC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGAATCTCTGTGGCGGTaGTGGGGCACCATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATESLWR*WGTIQG
Trigger: ACCCTGAATGGTGCCCCATCACCGCCACAGAGATTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCAATTGCTGATTTGTaGGTGCAGATGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVAIADL*VQMMWR
Trigger: CCTCCACATCATCTGCACTCACAAATCAGCAATTGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGTGGCTGGCAATTGCTaGTTTGTGAGTGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVVAGNC*FVSADD
Trigger: ATCATCTGCACTCACAAATCAGCAATTGCCAGCCAC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGGGCAGGTTGGCCTTaGGAAATGGAATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGAGWP*EMESQK
Trigger: CTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATGCAATGCTTGTGTTaGGCAGAAGGTGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARMQCLC*AEGVRA
Trigger: AGCACGAACACCTTCTGCTCAACACAAGCATTGCAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGATGCAATGCTTGTGTTaGGCAGAAGGTGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVMQCLC*AEGVRA
Trigger: AGCACGAACACCTTCTGCTCAACACAAGCATTGCAT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLHEQL*RVSRRC
Trigger: GCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPFRAPP*ATLTSQ
Trigger: CTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGCCGAGGAGCAGGGCTaGTGGTACATACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLAEEQG*WYILSW
Trigger: CCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGCCGAGGAGCAGGGCTaGTGGTACATACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSAEEQG*WYILSW
Trigger: CCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTCTGAGAATCATTGCTaGGAGAATCTGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQSENHC*ENLHSQ
Trigger: CTGGGAGTGCAGATTCTCTCAGCAATGATTCTCAGA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTACCTGGCCTGCTGTTaGACTCTCTCTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWYLACC*TLSENH
Trigger: ATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCGCCCAGCCAGGACTTaGAATTCTTACAGTAAGATG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWRPART*NSYSKM
Trigger: CATCTTACTGTAAGAATTTCAAGTCCTGGCTGGGCG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCGCCCAGCCAGGACTTaGAATTCTTACAGTAAGATG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRPART*NSYSKM
Trigger: CATCTTACTGTAAGAATTTCAAGTCCTGGCTGGGCG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCGCCCAGCCAGGACTTaGAATTCTTACAGTAAGATG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRPART*NSYSKM
Trigger: CATCTTACTGTAAGAATTTCAAGTCCTGGCTGGGCG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACAATTCCAGCTGTGCTaGACCTTCAAACGCACTTGT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARQFQLC*TFKRTC
Trigger: ACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCGAGTCAGCAGGCGATaGAATGCTTGTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRVSRR*NACVEQ
Trigger: CTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATTGCTGAGAGAATCTaGACTCCCAGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQIAERI*TPRAVL
Trigger: CAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCAC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGLLHS*SLCCNH
Trigger: GTGATTGCAACAGAGAGAGCACGAATGGAGCAAACC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCAC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGLLHS*SLCCNH
Trigger: GTGATTGCAACAGAGAGAGCACGAATGGAGCAAACC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCGATATTGCAGCCACTaGATGTCTCGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRYCSH*MSRWLC
Trigger: GCAAAGCCAGCGAGACATGCAGTGGCTGCAATATCG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGTATCGCGCGATATTaGAGCCACTGCATGTCTCGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSIARY*SHCMSR
Trigger: GCGAGACATGCAGTGGCTGCAATATCGCGCGATACT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCGCTCCCAGTCCTTGTaGTGGCAGAAAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRSQSL*WQKEPQ
Trigger: CTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGPPEVD*LGLGLN
Trigger: GTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSTVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGACACCAGCGCACATaGCCTATTTGGTATAAGCAT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARHQRT*PIWYKH
Trigger: ATGCTTATACCAAATAGGGCATGTGCGCTGGTGTCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPNAYC*FSADSK
Trigger: CTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGPNAYC*FSADSK
Trigger: CTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACCAGCTCTTCACCTTaGCAGAATCCCCAGATACAG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTSSSP*QNPQIQ
Trigger: CTGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGGCATGAGCCACCGTaGCCAGTCGGCTTGACTTTA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGRHEPP*PVGLTL
Trigger: TAAAGTCAAGCCGACTGGGCACGGTGGCTCATGCCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRSRHR*HPFLRT
Trigger: GGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRSRHR*HPFLRT
Trigger: GGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCCAGGATTTATTGGTaGGAGGGGTGGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSRIYW*EGWHGG
Trigger: CCCACCATGCCACCCCTCCCACCAATAAATCCTGGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTCCTCCAGGATTTATTaGTGGGAGGGGTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSSRIY*WEGWHG
Trigger: ACCATGCCACCCCTCCCACCAATAAATCCTGGAGGA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGGAGTGAAGGACACTaGCCTCGGTCCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGRSEGH*PRSSRI
Trigger: AATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAGGAGTGAAGGACACTaGCCTCGGTCCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPRSEGH*PRSSRI
Trigger: AATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAGCACCACAAGTGGCTaGCAATTGCTGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSTTSG*QLLICE
Trigger: CTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTGGTACATACTCTCTTaGCAGGAGGCTCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSWYILS*QEAQEQ
Trigger: TTGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGGGTAGGATGGAATTaGCCCCCGGGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGVGWN*PPGFMR
Trigger: CCTCATGAATCCCGGGGGCCAATTCCATCCTACCCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGTAATGCTGAAGAGGTaGAGGGGTAGGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARVMLKR*RGRMEL
Trigger: CAATTCCATCCTACCCCTCCACCTCTTCAGCATTAC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLTTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLLVTF*PKWAKE
Trigger: TTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTCACTGAGTGTACACTaGGCAGCCGTAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSLSVH*AAVGST
Trigger: GGTCGAGCCTACGGCTGCCCAGTGTACACTCAGTGA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCCTCCTTTCATTAGCTaGACATGTGTCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWPPFIS*TCVSSL
Trigger: GAGAGAGCTGACACATGTCCAGCTAATGAAAGGAGG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGACTGCCAAAAGCCCTaGGTTTTTAAACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVDCQKP*VFKPCP
Trigger: TGGACAGGGTTTAAAAACCCAGGGCTTTTGGCAGTC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGGCAGGACCATTGCTaGATCTCTGTGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRQDHC*ISVAVM
Trigger: CATCACCGCCACAGAGATTCAGCAATGGTCCTGCCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGGCAGGACCATTGCTaGATCTCTGTGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRQDHC*ISVAVM
Trigger: CATCACCGCCACAGAGATTCAGCAATGGTCCTGCCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGTGGCTGGCAATTGCTaGTTTGTGAGTGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSVAGNC*FVSADD
Trigger: ATCATCTGCACTCACAAATCAGCAATTGCCAGCCAC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGCGTTTCAACTTGCTaGGTTGTCGAGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSVSTC*VVEHHK
Trigger: CTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLHEQL*RVSRRC
Trigger: GCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLFRAPP*ATLTSQ
Trigger: CTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGAGTTCTTCACGATCTaGTTCCTGACAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATEFFTI*FLTAPQ
Trigger: CTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGAGTTCTTCACGATCTaGTTCCTGACAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLEFFTI*FLTAPQ
Trigger: CTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGGCAGAGGCCCTCGTaGCTTCTGTGTGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGQRPS*LLCETD
Trigger: GTCAGTTTCACACAGAAGTCACGAGGGCCTCTGCCC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCAATCTACGCAATCGGTaGCCCCACGGTCACCCAACC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSNLRNR*PHGHPT
Trigger: GGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAATTCCAGCTGTGCTaGACCTTCAAACGCACTTGT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQFQLC*TFKRTC
Trigger: ACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACATCATCTTTGGAAATaGGCACGTCGATGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGHHLWK*ARRCPR
Trigger: CCTCGGGCATCGACGTGCTCATTTCCAAAGATGATG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERTRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMICSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGCCGCCCGAGCGCAGTaGAGCAGTTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMAARAQ*SSSRCS
Trigger: GCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGCCGCCCGAGCGCAGTaGAGCAGTTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIAARAQ*SSSRCS
Trigger: GCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCACGAACTTCTCGATaGTCTAGCATCTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSRTSR*SSILLG
Trigger: ACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAACAGCGCCGCAGAACTaGCATAGAGCGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGTAPQN*HRAPCF
Trigger: AAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSTSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCGTGCTCTCTCTGTTaGAATCACTTCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASCSLC*NHFKGF
Trigger: AAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACGATATTGCAGCCACTaGATGTCTCGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGRYCSH*MSRWLC
Trigger: GCAAAGCCAGCGAGACATGCAGTGGCTGCAATATCG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCAGTATCGCGCGATATTaGAGCCACTGCATGTCTCGC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRSIARY*SHCMSR
Trigger: GCGAGACATGCAGTGGCTGCAATATCGCGCGATACT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGAACGCGATGTGGTTaGCGAGGTCTTGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGTRCG*RGLVEG
Trigger: GCCCTCGACAAGACCTCGGCAACCACATCGCGTTCC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACACAGCAGAAGGTTTaGAAACTGAGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTQQKV*KLSFSV
Trigger: CACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACACAGCAGAAGGTTTaGAAACTGAGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTQQKV*KLSFSV
Trigger: CACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGACACAGCAGAAGGTTTaGAAACTGAGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGTQQKV*KLSFSV
Trigger: CACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCCTTCTGTACCACCATaGCAGCTCCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQPSVPP*QLLFAF
Trigger: AAAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCATGAGTCAGGCACGGTaGAGGCAAGTGGGGACAAAA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRMSQAR*RQVGTK
Trigger: TTTTGTCCCCACTTGCCTGCACCGTGCCTGACTCAT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLPPEVD*LGLGLN
Trigger: GTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSTVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPCWNSP*SAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGACACCAGCGCACATaGCCTATTTGGTATAAGCAT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRHQRT*PIWYKH
Trigger: ATGCTTATACCAAATAGGGCATGTGCGCTGGTGTCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSPNAY*CFSADS
Trigger: GGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCCTCCAGGATTTATTaGTGGGAGGGGTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSSRIY*WEGWHG
Trigger: ACCATGCCACCCCTCCCACCAATAAATCCTGGAGGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGGAGTGAAGGACACTaGCCTCGGTCCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATRSEGH*PRSSRI
Trigger: AATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGGGTAGGAGGAGAATaGTTGATGCCATTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARVGGE*LMPLLN
Trigger: ATTAAGCAATGGCATCAACCATTCTCCTCCTACCCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTCTTCTCTCCTCTCTaGACTGGGCCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLFSPL*TGPLPI
Trigger: AATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGTAATGCTGAAGAGGTaGAGGGGTAGGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSVMLKR*RGRMEL
Trigger: CAATTCCATCCTACCCCTCCACCTCTTCAGCATTAC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCTGCTGTTGTTTCACTaGTCACACCTTACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQLLLFH*SHLTLG
Trigger: GCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSTTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCACGGTGCAGGCAAGTaGGGACAAAAAGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRHGAGK*GQKGQA
Trigger: TGCTTGTCCTTTTTGTCCCCACTTGCCTGCACCGTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTGTGGACTTGTGGTaGCAAGATGTGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGVDLW*QDVSCF
Trigger: GAAACAGGACACATCTTGCCACCACAAGTCCACACC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLLVTF*PKWAKE
Trigger: TTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAATGCATTCTGTGGGTaGTGTCACATTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARNAFCG*CHIHHP
Trigger: GGGATGATGAATGTGACACCACCCACAGAATGCATT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACAGATGGATCCCAGATaGGAAGGTCCTGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGQMDPR*EGPAKQ
Trigger: CTGTTTGGCAGGACCTTCCCATCTGGGATCCATCTG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTGGCATGGTGGGAGGTaGGGATCTGGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLWHGGR*GSGLYL
Trigger: AAGATACAGTCCAGATCCTCACCTCCCACCATGCCA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCAGGCAGGACCATTGCTaGATCTCTGTGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSRQDHC*ISVAVM
Trigger: CATCACCGCCACAGAGATTCAGCAATGGTCCTGCCT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGTGGCTGGCAATTGCTaGTTTGTGAGTGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSVAGNC*FVSADD
Trigger: ATCATCTGCACTCACAAATCAGCAATTGCCAGCCAC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGGGCAGGTTGGCCTTaGGAAATGGAATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGAGWP*EMESQK
Trigger: CTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTCTGAGAATCATTGCTaGGAGAATCTGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSENHC*ENLHSQ
Trigger: CTGGGAGTGCAGATTCTCTCAGCAATGATTCTCAGA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCTGTTGAACTCTCTCTaGGAATCATTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQLLNSL*ESLLRE
Trigger: TTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTGTTGAACTCTCTCTaGGAATCATTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLLNSL*ESLLRE
Trigger: TTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTAGACATGTCTGGCTaGTGGCCAGTCACATGTTGC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLDMSG*WPVTCC
Trigger: GCAACATGTGACTGGCCATCAGCCAGACATGTCTAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTAGACATGTCTGGCTaGTGGCCAGTCACATGTTGC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLDMSG*WPVTCC
Trigger: GCAACATGTGACTGGCCATCAGCCAGACATGTCTAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGACAAGCAAAGACGTaGAACCCAGCCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGQAKT*NPALKK
Trigger: TTTCTTGAGGGCTGGGTTTCACGTCTTTGCTTGTCC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAITFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAATCTACGCAATCGGTaGCCCCACGGTCACCCAACC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQNLRNR*PHGHPT
Trigger: GGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTGGTATAAGCATCACTaGGTGTACACTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSWYKHH*VYTGQP
Trigger: CGGCTGCCCAGTGTACACTCAGTGATGCTTATACCA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTGGTATAAGCATCACTaGGTGTACACTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLWYKHH*VYTGQP
Trigger: CGGCTGCCCAGTGTACACTCAGTGATGCTTATACCA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTTTAGCCCAGGAGTTTaGGACCCACCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLFSPGV*DPPGQH
Trigger: ATGTTGCCCAGGTGGGTCTCAAACTCCTGGGCTAAA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTTAGCCCAGGAGTTTaGGACCCACCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSFSPGV*DPPGQH
Trigger: ATGTTGCCCAGGTGGGTCTCAAACTCCTGGGCTAAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTACTGGGATGGGGTCTaGTTGGCCGCCCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFYWDGV*LAARAQ
Trigger: CTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCGAGTCAGCAGGCGATaGAATGCTTGTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRVSRR*NACVEQ
Trigger: CTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGACAGCGCCGCAGAACTaGCATAGAGCGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLTAPQN*HRAPCF
Trigger: AAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCATTGCTGAGAGAATCTaGACTCCCAGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATIAERI*TPRAVL
Trigger: CAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAAT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTCGTGCTCTCTCTGTTaGAATCACTTCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSCSLC*NHFKGF
Trigger: AAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCGTGCTCTCTCTGTTaGAATCACTTCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSCSLC*NHFKGF
Trigger: AAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCAC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGLLHS*SLCCNH
Trigger: GTGATTGCAACAGAGAGAGCACGAATGGAGCAAACC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSTSAMV*SIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSVDSS*SLMTRK
Trigger: TTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCGATATTGCAGCCACTaGATGTCTCGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATRYCSH*MSRWLC
Trigger: GCAAAGCCAGCGAGACATGCAGTGGCTGCAATATCG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTTTCTAACCCAGCACTaGCCTAGAAATAATCTACGC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGFLTQH*PRNNLR
Trigger: GCGTAGATTATTTCTAGGGCAGTGCTGGGTTAGAAA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSPNAYC*FSADSK
Trigger: CTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSPNAY*CFSADS
Trigger: GGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGTACAGTCAGGATTGTaGTCCACAAAAACTACCATC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARVQSGL*STKTTI
Trigger: GATGGTAGTTTTTGTGGAGCACAATCCTGACTGTAC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTTCTCAGGACCAAGCTaGAAGGCGGCCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIFSGPS*KAAAPG
Trigger: CCCTGGAGCGGCCGCCTTCCAGCTTGGTCCTGAGAA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342704.11
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGGGAGGTGAGGATCTaGACTGTATCTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSWEVRI*TVSSLP
Trigger: TGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTGGGAGGTGAGGATCTaGACTGTATCTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQWEVRI*TVSSLP
Trigger: TGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTCCTCCAGGATTTATTaGTGGGAGGGGTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSSRIY*WEGWHG
Trigger: ACCATGCCACCCCTCCCACCAATAAATCCTGGAGGA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGTCGAGCACCACAAGTaGCTGGCAATTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRVEHHK*LAIADL
Trigger: CAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGAC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGTCGAGCACCACAAGTaGCTGGCAATTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPVEHHK*LAIADL
Trigger: CAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGAC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASWSLQ*NSSIVT
Trigger: AGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTTGGCCTTGAGAAATaGAATCACAAAAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVGLEK*NHKRTK
Trigger: CTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTCTTCTCTCCTCTCTaGACTGGGCCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLFSPL*TGPLPI
Trigger: AATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTGGTACATACTCTCTTaGCAGGAGGCTCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRWYILS*QEAQEQ
Trigger: TTGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTGGTACATACTCTCTTaGCAGGAGGCTCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPWYILS*QEAQEQ
Trigger: TTGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATGGTACATACTCTCTTaGCAGGAGGCTCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGWYILS*QEAQEQ
Trigger: TTGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGTAATGCTGAAGAGGTaGAGGGGTAGGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSVMLKR*RGRMEL
Trigger: CAATTCCATCCTACCCCTCCACCTCTTCAGCATTAC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGALASC*VPDTGE
Trigger: CTCACCTGTATCGGGAACCCAACAAGATGCTAGAGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRALASC*VPDTGE
Trigger: CTCACCTGTATCGGGAACCCAACAAGATGCTAGAGC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTTTAGACCAAGACTGTaGTGTCTATCACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAFRPRL*CLSRTS
Trigger: AGAAGTTCGTGATAGACACCACAGTCTTGGTCTAAA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCTGCTGTTGTTTCACTaGTCACACCTTACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSLLLFH*SHLTLG
Trigger: GCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERTTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCACCCTAGACATGTCTaGCTGATGGCCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHPRHV*LMASHM
Trigger: CATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSNSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCACGGTGCAGGCAAGTaGGGACAAAAAGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATHGAGK*GQKGQA
Trigger: TGCTTGTCCTTTTTGTCCCCACTTGCCTGCACCGTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLLVTF*PKWAKE
Trigger: TTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp AGCTCACGATGGAAAAGGTCACCTGCACCATCATCTTaGGAAATGAGCACGTCGATGCCCGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSRWKRSPAPSS*EMSTSMPEERG
Trigger: GCCTCTTTCCTCGGGCATCGACGTGCTCATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCATCGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp TTTTGTGAGCGGAGCCTTTGTAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FCERSLCSLVRK*ESHVKGTEGLL
Trigger: CAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCTACAAAGGCTCCGCTCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGGCAGGACCATTGCTaGATCTCTGTGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRQDHC*ISVAVM
Trigger: CATCACCGCCACAGAGATTCAGCAATGGTCCTGCCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGCAATTGCTGATTTGTaGGTGCAGATGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRAIADL*VQMMWR
Trigger: CCTCCACATCATCTGCACTCACAAATCAGCAATTGC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGTGGCTGGCAATTGCTaGTTTGTGAGTGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPVAGNC*FVSADD
Trigger: ATCATCTGCACTCACAAATCAGCAATTGCCAGCCAC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGGGGCAGGTTGGCCTTaGGAAATGGAATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLGAGWP*EMESQK
Trigger: CTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGTCTTTTCCAGTAGTTaGGTTCTTCACGATCTGATT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQVFSSS*VLHDLI
Trigger: AATCAGATCGTGAAGAACTCAACTACTGGAAAAGAC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTCTTTTCCAGTAGTTaGGTTCTTCACGATCTGATT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVFSSS*VLHDLI
Trigger: AATCAGATCGTGAAGAACTCAACTACTGGAAAAGAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCTGAGAATCATTGCTaGGAGAATCTGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSENHC*ENLHSQ
Trigger: CTGGGAGTGCAGATTCTCTCAGCAATGATTCTCAGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCTGCGGCCTGCCGCTTaGCATCCGCTATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILRPAA*HPLWFA
Trigger: AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTGCGGCCTGCCGCTTaGCATCCGCTATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILRPAA*HPLWFA
Trigger: AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLFPFP*TSMSNS
Trigger: AGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLFPFP*TSMSNS
Trigger: AGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLFPFP*TSMSNS
Trigger: AGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCACAGCGCCGCAGAACTaGCATAGAGCGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSTAPQN*HRAPCF
Trigger: AAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCATTGCTGAGAGAATCTaGACTCCCAGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSIAERI*TPRAVL
Trigger: CAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAAT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERTSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGTSAMV*SIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSVDSS*SLMTRK
Trigger: TTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTTATTGCTGCTTCTCTaGCGACTCCAAGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLLLLL*RLQGRD
Trigger: ATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTATTGCTGCTTCTCTaGCGACTCCAAGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLLLLL*RLQGRD
Trigger: ATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCAGATGGGAAGGTCCTaGCAAACAGACCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSQMGRS*QTDQLF
Trigger: GAAGAGCTGGTCTGTTTGGCAGGACCTTCCCATCTG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACAGGACCAACCCAAATaGCCAAATTATAAACAATCC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARQDQPK*PNYKQS
Trigger: GGATTGTTTATAATTTGGGCATTTGGGTTGGTCCTG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397800.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGTTCCAAAAGATGAATaGAACATCACAGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQVPKDE*NITGTV
Trigger: GACTGTACCTGTGATGTTGCATTCATCTTTTGGAAC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGACCAACTTTCCATTaGCTTGCCAGGACCTGTATT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGPTFH*LARTCI
Trigger: AATACAGGTCCTGGCAAGGCAATGGAAAGTTGGTCC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTGGGAGGTGAGGATCTaGACTGTATCTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPWEVRI*TVSSLP
Trigger: TGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTGGGAGGTGAGGATCTaGACTGTATCTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRWEVRI*TVSSLP
Trigger: TGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTCCAGGATTTATTGGTaGGAGGGGTGGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQSRIYW*EGWHGG
Trigger: CCCACCATGCCACCCCTCCCACCAATAAATCCTGGA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGAGGAGTGAAGGACACTaGCCTCGGTCCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERRSEGH*PRSSRI
Trigger: AATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAGCACCACAAGTGGCTaGCAATTGCTGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSTTSG*QLLICE
Trigger: CTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGCACCACAAGTGGCTaGCAATTGCTGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSTTSG*QLLICE
Trigger: CTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQSWSLQ*NSSIVT
Trigger: AGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSWSLQ*NSSIVT
Trigger: AGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGGTGGAGGGGTAGGATaGAATTGGCCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIGGGVG*NWPPGF
Trigger: GAATCCCGGGGGCCAATTCCATCCTACCCCTCCACC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGTAATGCTGAAGAGGTaGAGGGGTAGGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGVMLKR*RGRMEL
Trigger: CAATTCCATCCTACCCCTCCACCTCTTCAGCATTAC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATTTAGACCAAGACTGTaGTGTCTATCACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARFRPRL*CLSRTS
Trigger: AGAAGTTCGTGATAGACACCACAGTCTTGGTCTAAA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATTFWPK*AKEIHA
Trigger: AGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLTFWPK*AKEIHA
Trigger: AGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLLVTF*PKWAKE
Trigger: TTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCTCCTTTCATTAGCTaGACATGTGTCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPPFIS*TCVSSL
Trigger: GAGAGAGCTGACACATGTCCAGCTAATGAAAGGAGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTTTGGGCAGCCAACATaGGAAGATCGCTTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATFGQPT*EDRFSP
Trigger: TGGGCTAAAGCGATCTTCCCATGTTGGCTGCCCAAA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCAATTGCTGATTTGTaGGTGCAGATGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATAIADL*VQMMWR
Trigger: CCTCCACATCATCTGCACTCACAAATCAGCAATTGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGCAATTGCTGATTTGTaGGTGCAGATGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLAIADL*VQMMWR
Trigger: CCTCCACATCATCTGCACTCACAAATCAGCAATTGC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILHEQL*RVSRRC
Trigger: GCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILHEQL*RVSRRC
Trigger: GCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGGTTCCCGATACAGGTaGGAAGTTGCAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLGSRYR*EVAISS
Trigger: AGAGGATATTGCAACTTCTCACCTGTATCGGGAACC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMISRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTCTGAGAATCATTGCTaGGAGAATCTGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSSENHC*ENLHSQ
Trigger: CTGGGAGTGCAGATTCTCTCAGCAATGATTCTCAGA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTACCTGGCCTGCTGTTaGACTCTCTCTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLYLACC*TLSENH
Trigger: ATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGGGATTCTTGAAATGTaGATAGAAGGTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLGILEM*IEGPGQ
Trigger: CTGCCCAGGACCTTCTATTCACATTTCAAGAATCCC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGGATTCTTGAAATGTaGATAGAAGGTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGILEM*IEGPGQ
Trigger: CTGCCCAGGACCTTCTATTCACATTTCAAGAATCCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGACAAGCAAAGACGTaGAACCCAGCCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGQAKT*NPALKK
Trigger: TTTCTTGAGGGCTGGGTTTCACGTCTTTGCTTGTCC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAATTCCAGCTGTGCTaGACCTTCAAACGCACTTGT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQFQLC*TFKRTC
Trigger: ACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFTRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTGGTATAAGCATCACTaGGTGTACACTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERWYKHH*VYTGQP
Trigger: CGGCTGCCCAGTGTACACTCAGTGATGCTTATACCA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTCACGAACTTCTCGATaGTCTAGCATCTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRSRTSR*SSILLG
Trigger: ACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCGTGCTCTCTCTGTTaGAATCACTTCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSCSLC*NHFKGF
Trigger: AAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCAC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLGLLHS*SLCCNH
Trigger: GTGATTGCAACAGAGAGAGCACGAATGGAGCAAACC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCAC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGLLHS*SLCCNH
Trigger: GTGATTGCAACAGAGAGAGCACGAATGGAGCAAACC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATTSAMV*SIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAACACAGCAGAAGGTTTaGAAACTGAGCTTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGTQQKV*KLSFSV
Trigger: CACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTTTCTAACCCAGCACTaGCCTAGAAATAATCTACGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSFLTQH*PRNNLR
Trigger: GCGTAGATTATTTCTAGGGCAGTGCTGGGTTAGAAA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTATTGCTGCTTCTCTaGCGACTCCAAGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLLLLL*RLQGRD
Trigger: ATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPNAYC*FSADSK
Trigger: CTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAGCTCTCTCACATCTaGGATTTCTCACTGACTAGA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQLSHI*DFSLTR
Trigger: TCTAGTCAGTGAGAAATCGCAGATGTGAGAGAGCTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTGGGAGGTGAGGATCTaGACTGTATCTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLWEVRI*TVSSLP
Trigger: TGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGGGTAGGATGGAATTaGCCCCCGGGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGVGWN*PPGFMR
Trigger: CCTCATGAATCCCGGGGGCCAATTCCATCCTACCCC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTACGTATCCTGTACCTaGCCTGCTGTTGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATYVSCT*PAVELS
Trigger: AGAGAGTTCAACAGCAGGCCAGGTACAGGATACGTA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERLRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCTGCTGTTGTTTCACTaGTCACACCTTACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLLLFH*SHLTLG
Trigger: GCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMITTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCACCCTAGACATGTCTaGCTGATGGCCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERHPRHV*LMASHM
Trigger: CATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLNSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSNSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATCACTGAGTGTACACTaGGCAGCCGTAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISLSVH*AAVGST
Trigger: GGTCGAGCCTACGGCTGCCCAGTGTACACTCAGTGA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAGATGGATCCCAGATaGGAAGGTCCTGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQMDPR*EGPAKQ
Trigger: CTGTTTGGCAGGACCTTCCCATCTGGGATCCATCTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp CCAGCCCTCAAGAAACTCTGGGGACATCTGGCATCTTaGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: PALKKLWGHLAS*VFSGPCNHSSL
Trigger: AAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGAATCTCTGTGGCGGTaGTGGGGCACCATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFESLWR*WGTIQG
Trigger: ACCCTGAATGGTGCCCCATCACCGCCACAGAGATTC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCAGGCAGGACCATTGCTaGATCTCTGTGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRQDHC*ISVAVM
Trigger: CATCACCGCCACAGAGATTCAGCAATGGTCCTGCCT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGAGCGTTTCAACTTGCTaGGTTGTCGAGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSVSTC*VVEHHK
Trigger: CTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGGGCAGGTTGGCCTTaGGAAATGGAATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGAGWP*EMESQK
Trigger: CTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGCCGAGGAGCAGGGCTaGTGGTACATACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFAEEQG*WYILSW
Trigger: CCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTACCTGGCCTGCTGTTaGACTCTCTCTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSYLACC*TLSENH
Trigger: ATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERTHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGGGCAGAGGCCCTCGTaGCTTCTGTGTGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFGQRPS*LLCETD
Trigger: GTCAGTTTCACACAGAAGTCACGAGGGCCTCTGCCC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGCTAAAGCTAGGCAATaGAATGGACAGTCCACACAA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLAKARQ*NGQSTQ
Trigger: TTGTGTGGACTGTCCATTTCATTGCCTAGCTTTAGC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLFPFP*TSMSNS
Trigger: AGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTCACGAACTTCTCGATaGTCTAGCATCTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSSRTSR*SSILLG
Trigger: ACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMITSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCGTGCTCTCTCTGTTaGAATCACTTCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSCSLC*NHFKGF
Trigger: AAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSSVDSS*SLMTRK
Trigger: TTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGAACGCGATGTGGTTaGCGAGGTCTTGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGTRCG*RGLVEG
Trigger: GCCCTCGACAAGACCTCGGCAACCACATCGCGTTCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCTTCTGTACCACCATaGCAGCTCCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPSVPP*QLLFAF
Trigger: AAAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIPPEVD*LGLGLN
Trigger: GTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTTCTAACCCAGCACTaGCCTAGAAATAATCTACGC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRFLTQH*PRNNLR
Trigger: GCGTAGATTATTTCTAGGGCAGTGCTGGGTTAGAAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGACACCAGCGCACATaGCCTATTTGGTATAAGCAT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRHQRT*PIWYKH
Trigger: ATGCTTATACCAAATAGGGCATGTGCGCTGGTGTCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSPNAY*CFSADS
Trigger: GGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQSPNAY*CFSADS
Trigger: GGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAGCTCTCTCACATCTaGGATTTCTCACTGACTAGA +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQLSHI*DFSLTR
Trigger: TCTAGTCAGTGAGAAATCGCAGATGTGAGAGAGCTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGTTCCAAAAGATGAATaGAACATCACAGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQVPKDE*NITGTV
Trigger: GACTGTACCTGTGATGTTGCATTCATCTTTTGGAAC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGACCAACTTTCCATTaGCTTGCCAGGACCTGTATT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGPTFH*LARTCI
Trigger: AATACAGGTCCTGGCAAGGCAATGGAAAGTTGGTCC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCAGGGTAGGAGGAGAATaGTTGATGCCATTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRRVGGE*LMPLLN
Trigger: ATTAAGCAATGGCATCAACCATTCTCCTCCTACCCT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGTTGGCCTTGAGAAATaGAATCACAAAAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPVGLEK*NHKRTK
Trigger: CTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAAC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGTTGGCCTTGAGAAATaGAATCACAAAAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRVGLEK*NHKRTK
Trigger: CTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAAC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGTGGAGGGGTAGGATaGAATTGGCCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGGGVG*NWPPGF
Trigger: GAATCCCGGGGGCCAATTCCATCCTACCCCTCCACC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGTAATGCTGAAGAGGTaGAGGGGTAGGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSVMLKR*RGRMEL
Trigger: CAATTCCATCCTACCCCTCCACCTCTTCAGCATTAC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQALASC*VPDTGE
Trigger: CTCACCTGTATCGGGAACCCAACAAGATGCTAGAGC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGTGTGGACTTGTGGTaGCAAGATGTGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGVDLW*QDVSCF
Trigger: GAAACAGGACACATCTTGCCACCACAAGTCCACACC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTCTCTTAGCTCACGATaGAAAAGGTCACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSSLSSR*KRSPAP
Trigger: TGGTGCAGGTGACCTTTTCCATCGTGAGCTAAGAGA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTTTAAAAACCACGCGTaGAGGCTTCGTTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSFKNHA*RLRFLF
Trigger: AAATAGAAAACGAAGCCTCCACGCGTGGTTTTTAAA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGAGGCAGAAAAAGGTTaGGAGCACCGAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFEAEKG*EHRRAW
Trigger: CCAGGCCCTTCGGTGCTCCCAACCTTTTTCTGCCTC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543126.1
3UTR CAA 72 bp GACTCTGGTCAGTGCACAGAAGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTGGAGCAGGGCCAATTA +
Preference number: 4 (lower is better)
Translates to: DSGQCTEGGDLN*CFKGQLEQGQL
Trigger: TAATTGGCCCTGCTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGCAATTGCTGATTTGTaGGTGCAGATGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERAIADL*VQMMWR
Trigger: CCTCCACATCATCTGCACTCACAAATCAGCAATTGC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGCCGAGGAGCAGGGCTaGTGGTACATACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMAEEQG*WYILSW
Trigger: CCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGTTCCCGATACAGGTaGGAAGTTGCAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGSRYR*EVAISS
Trigger: AGAGGATATTGCAACTTCTCACCTGTATCGGGAACC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGAGTTCTTCACGATCTaGTTCCTGACAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFEFFTI*FLTAPQ
Trigger: CTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGTCTTTTCCAGTAGTTaGGTTCTTCACGATCTGATT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGVFSSS*VLHDLI
Trigger: AATCAGATCGTGAAGAACTCAACTACTGGAAAAGAC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGTTGAACTCTCTCTaGGAATCATTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLLNSL*ESLLRE
Trigger: TTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTGTTGAACTCTCTCTaGGAATCATTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLLNSL*ESLLRE
Trigger: TTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCTAGACATGTCTGGCTaGTGGCCAGTCACATGTTGC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILDMSG*WPVTCC
Trigger: GCAACATGTGACTGGCCATCAGCCAGACATGTCTAG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATCTGCGATTTCTCACTaGCTAGAGCTGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISAISH*LELPVP
Trigger: TGGGACAGGCAGCTCTAGTCAGTGAGAAATCGCAGA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTTATGTTCCAAAAGATaGATGCAACATCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLCSKR*MQHHRY
Trigger: GTACCTGTGATGTTGCATTCATCTTTTGGAACATAA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGCACTGAGGAAGGGATaGGGCAGAAAAAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIALRKG*GRKRLG
Trigger: TCCCAACCTTTTTCTGCCTCATCCCTTCCTCAGTGC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTCATTGCCAAACTGTTaGAGAGTGGTAAGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSLPNC*RVVRKR
Trigger: ACGCTTTCTTACCACTCTGCAACAGTTTGGCAATGA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCGAGTCAGCAGGCGATaGAATGCTTGTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRVSRR*NACVEQ
Trigger: CTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTCACGAACTTCTCGATaGTCTAGCATCTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSSRTSR*SSILLG
Trigger: ACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCTCCCAGGGCTGTGCTaGCTGGAGACCAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLPGLC*LETNSV
Trigger: GACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAATTGCTGAGAGAATCTaGACTCCCAGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIIAERI*TPRAVL
Trigger: CAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAAT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCAC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGLLHS*SLCCNH
Trigger: GTGATTGCAACAGAGAGAGCACGAATGGAGCAAACC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERTSAMV*SIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGTATCGCGCGATATTaGAGCCACTGCATGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISIARY*SHCMSR
Trigger: GCGAGACATGCAGTGGCTGCAATATCGCGCGATACT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCGCTCCCAGTCCTTGTaGTGGCAGAAAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRSQSL*WQKEPQ
Trigger: CTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGAACGCGATGTGGTTaGCGAGGTCTTGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGTRCG*RGLVEG
Trigger: GCCCTCGACAAGACCTCGGCAACCACATCGCGTTCC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAATGAGTCAGGCACGGTaGAGGCAAGTGGGGACAAAA +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIMSQAR*RQVGTK
Trigger: TTTTGTCCCCACTTGCCTGCACCGTGCCTGACTCAT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSITVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTTTCTAACCCAGCACTaGCCTAGAAATAATCTACGC +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLFLTQH*PRNNLR
Trigger: GCGTAGATTATTTCTAGGGCAGTGCTGGGTTAGAAA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACAGATGGGAAGGTCCTaGCAAACAGACCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIQMGRS*QTDQLF
Trigger: GAAGAGCTGGTCTGTTTGGCAGGACCTTCCCATCTG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCAGCTCTCTCACATCTaGGATTTCTCACTGACTAGA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSQLSHI*DFSLTR
Trigger: TCTAGTCAGTGAGAAATCGCAGATGTGAGAGAGCTG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGTTCCAAAAGATGAATaGAACATCACAGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGVPKDE*NITGTV
Trigger: GACTGTACCTGTGATGTTGCATTCATCTTTTGGAAC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCCCTTTCCATTGCCTTaGCAGGACCTGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSPFPLP*QDLYFF
Trigger: AAAGAAATACAGGTCCTGGCAAGGCAATGGAAAGGG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGTTGGCCTTGAGAAATaGAATCACAAAAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATVGLEK*NHKRTK
Trigger: CTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAAC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGGGTAGGATGGAATTaGCCCCCGGGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGVGWN*PPGFMR
Trigger: CCTCATGAATCCCGGGGGCCAATTCCATCCTACCCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGGGTAGGATGGAATTaGCCCCCGGGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGVGWN*PPGFMR
Trigger: CCTCATGAATCCCGGGGGCCAATTCCATCCTACCCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTGGAGGGGTAGGATaGAATTGGCCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGGGVG*NWPPGF
Trigger: GAATCCCGGGGGCCAATTCCATCCTACCCCTCCACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCATGCAATTCAGCGCATaGTCAAGATGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRMQFSA*SRCFHS
Trigger: TGAATGGAAACATCTTGACCATGCGCTGAATTGCAT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAATGCAATTCAGCGCATaGTCAAGATGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGMQFSA*SRCFHS
Trigger: TGAATGGAAACATCTTGACCATGCGCTGAATTGCAT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTCTGTACTTCTGACATaGCCTGAATTTTCACCTTAT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSVLLT*PEFSPY
Trigger: ATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTGCTGTTGTTTCACTaGTCACACCTTACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLLLFH*SHLTLG
Trigger: GCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMTTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTCTCTTAGCTCACGATaGAAAAGGTCACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQSLSSR*KRSPAP
Trigger: TGGTGCAGGTGACCTTTTCCATCGTGAGCTAAGAGA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATCACTGAGTGTACACTaGGCAGCCGTAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSISLSVH*AAVGST
Trigger: GGTCGAGCCTACGGCTGCCCAGTGTACACTCAGTGA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTTTAAAAACCACGCGTaGAGGCTTCGTTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSFKNHA*RLRFLF
Trigger: AAATAGAAAACGAAGCCTCCACGCGTGGTTTTTAAA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp CTTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTaGGCCGACCATAATGTCCCACAACTCATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LWSSLVPAIIPH*ADHNVPQLISV
Trigger: AACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGGCATGGTGGGAGGTaGGGATCTGGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFWHGGR*GSGLYL
Trigger: AAGATACAGTCCAGATCCTCACCTCCCACCATGCCA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGCGTTTCAACTTGCTaGGTTGTCGAGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISVSTC*VVEHHK
Trigger: CTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGGGCAGGTTGGCCTTaGGAAATGGAATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGAGWP*EMESQK
Trigger: CTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILHEQL*RVSRRC
Trigger: GCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIFRAPP*ATLTSQ
Trigger: CTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMFRAPP*ATLTSQ
Trigger: CTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCCGAGGAGCAGGGCTaGTGGTACATACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIAEEQG*WYILSW
Trigger: CCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGAGTTCTTCACGATCTaGTTCCTGACAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMEFFTI*FLTAPQ
Trigger: CTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTGTTGAACTCTCTCTaGGAATCATTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLLNSL*ESLLRE
Trigger: TTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMITHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCTAGACATGTCTGGCTaGTGGCCAGTCACATGTTGC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFLDMSG*WPVTCC
Trigger: GCAACATGTGACTGGCCATCAGCCAGACATGTCTAG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGGTATAAGCATCACTaGGTGTACACTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFWYKHH*VYTGQP
Trigger: CGGCTGCCCAGTGTACACTCAGTGATGCTTATACCA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTCTGCGATTTCTCACTaGCTAGAGCTGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFSAISH*LELPVP
Trigger: TGGGACAGGCAGCTCTAGTCAGTGAGAAATCGCAGA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCGAGTCAGCAGGCGATaGAATGCTTGTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRVSRR*NACVEQ
Trigger: CTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSITSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCGATATTGCAGCCACTaGATGTCTCGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRYCSH*MSRWLC
Trigger: GCAAAGCCAGCGAGACATGCAGTGGCTGCAATATCG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGTATCGCGCGATATTaGAGCCACTGCATGTCTCGC +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFSIARY*SHCMSR
Trigger: GCGAGACATGCAGTGGCTGCAATATCGCGCGATACT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCGCTCCCAGTCCTTGTaGTGGCAGAAAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRSQSL*WQKEPQ
Trigger: CTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCATGAGTCAGGCACGGTaGAGGCAAGTGGGGACAAAA +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFMSQAR*RQVGTK
Trigger: TTTTGTCCCCACTTGCCTGCACCGTGCCTGACTCAT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAACCAGCTCTTCACCTTaGCAGAATCCCCAGATACAG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAITSSSP*QNPQIQ
Trigger: CTGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGTACAGTCAGGATTGTaGTCCACAAAAACTACCATC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSVQSGL*STKTTI
Trigger: GATGGTAGTTTTTGTGGAGCACAATCCTGACTGTAC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAACTTTCCATTGCCTTaGCAGGACCTGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSNFPLP*QDLYFF
Trigger: AAAGAAATACAGGTCCTGGCAAGGCAATGGAAAGTT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRSRHR*HPFLRT
Trigger: GGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSWSLQ*NSSIVT
Trigger: AGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLSWSLQ*NSSIVT
Trigger: AGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGGGTAGGATGGAATTaGCCCCCGGGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGVGWN*PPGFMR
Trigger: CCTCATGAATCCCGGGGGCCAATTCCATCCTACCCC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGGTGGAGGGGTAGGATaGAATTGGCCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHGGGVG*NWPPGF
Trigger: GAATCCCGGGGGCCAATTCCATCCTACCCCTCCACC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTTTAGACCAAGACTGTaGTGTCTATCACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATFRPRL*CLSRTS
Trigger: AGAAGTTCGTGATAGACACCACAGTCTTGGTCTAAA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGATGCAATTCAGCGCATaGTCAAGATGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLMQFSA*SRCFHS
Trigger: TGAATGGAAACATCTTGACCATGCGCTGAATTGCAT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCTGTACTTCTGACATaGCCTGAATTTTCACCTTAT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSVLLT*PEFSPY
Trigger: ATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTTAAAAACCACGCGTaGAGGCTTCGTTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRFKNHA*RLRFLF
Trigger: AAATAGAAAACGAAGCCTCCACGCGTGGTTTTTAAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATGGCATGGTGGGAGGTaGGGATCTGGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIWHGGR*GSGLYL
Trigger: AAGATACAGTCCAGATCCTCACCTCCCACCATGCCA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGTGGCTGGCAATTGCTaGTTTGTGAGTGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIVAGNC*FVSADD
Trigger: ATCATCTGCACTCACAAATCAGCAATTGCCAGCCAC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGCGTTTCAACTTGCTaGGTTGTCGAGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFSVSTC*VVEHHK
Trigger: CTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCATGCAATGCTTGTGTTaGGCAGAAGGTGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIMQCLC*AEGVRA
Trigger: AGCACGAACACCTTCTGCTCAACACAAGCATTGCAT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIFRAPP*ATLTSQ
Trigger: CTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGGTTCCCGATACAGGTaGGAAGTTGCAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIGSRYR*EVAISS
Trigger: AGAGGATATTGCAACTTCTCACCTGTATCGGGAACC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGTTGAACTCTCTCTaGGAATCATTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLLNSL*ESLLRE
Trigger: TTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTACCTGGCCTGCTGTTaGACTCTCTCTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIYLACC*TLSENH
Trigger: ATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTAGACATGTCTGGCTaGTGGCCAGTCACATGTTGC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILDMSG*WPVTCC
Trigger: GCAACATGTGACTGGCCATCAGCCAGACATGTCTAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMHHLWK*ARRCPR
Trigger: CCTCGGGCATCGACGTGCTCATTTCCAAAGATGATG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATGGTATAAGCATCACTaGGTGTACACTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIWYKHH*VYTGQP
Trigger: CGGCTGCCCAGTGTACACTCAGTGATGCTTATACCA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATCTGCGATTTCTCACTaGCTAGAGCTGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSISAISH*LELPVP
Trigger: TGGGACAGGCAGCTCTAGTCAGTGAGAAATCGCAGA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGGCTGCAGTGAGCTGTaGTCACACCACTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHGCSEL*SHHCAP
Trigger: TGGAGCACAGTGGTGTGATCACAGCTCACTGCAGCC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFLFPFP*TSMSNS
Trigger: AGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATGAGTCAGGCACGGTaGAGGCAAGTGGGGACAAAA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIMSQAR*RQVGTK
Trigger: TTTTGTCCCCACTTGCCTGCACCGTGCCTGACTCAT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTTCTAACCCAGCACTaGCCTAGAAATAATCTACGC +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQFLTQH*PRNNLR
Trigger: GCGTAGATTATTTCTAGGGCAGTGCTGGGTTAGAAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMCWNSP*SAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACAGATGGGAAGGTCCTaGCAAACAGACCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIQMGRS*QTDQLF
Trigger: GAAGAGCTGGTCTGTTTGGCAGGACCTTCCCATCTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGTACAGTCAGGATTGTaGTCCACAAAAACTACCATC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERVQSGL*STKTTI
Trigger: GATGGTAGTTTTTGTGGAGCACAATCCTGACTGTAC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCAACTTTCCATTGCCTTaGCAGGACCTGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSNFPLP*QDLYFF
Trigger: AAAGAAATACAGGTCCTGGCAAGGCAATGGAAAGTT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHRSRHR*HPFLRT
Trigger: GGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTCCTCCAGGATTTATTaGTGGGAGGGGTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMSSRIY*WEGWHG
Trigger: ACCATGCCACCCCTCCCACCAATAAATCCTGGAGGA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGAGGGTAGGAGGAGAATaGTTGATGCCATTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERRVGGE*LMPLLN
Trigger: ATTAAGCAATGGCATCAACCATTCTCCTCCTACCCT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGTTGGCCTTGAGAAATaGAATCACAAAAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQVGLEK*NHKRTK
Trigger: CTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAAC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTCTTCTCTCCTCTCTaGACTGGGCCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILFSPL*TGPLPI
Trigger: AATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGGTACATACTCTCTTaGCAGGAGGCTCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFWYILS*QEAQEQ
Trigger: TTGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFALASC*VPDTGE
Trigger: CTCACCTGTATCGGGAACCCAACAAGATGCTAGAGC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATACGTATCCTGTACCTaGCCTGCTGTTGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIYVSCT*PAVELS
Trigger: AGAGAGTTCAACAGCAGGCCAGGTACAGGATACGTA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTACGTATCCTGTACCTaGCCTGCTGTTGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIYVSCT*PAVELS
Trigger: AGAGAGTTCAACAGCAGGCCAGGTACAGGATACGTA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTCTGTACTTCTGACATaGCCTGAATTTTCACCTTAT +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLSVLLT*PEFSPY
Trigger: ATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACACCCTAGACATGTCTaGCTGATGGCCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIHPRHV*LMASHM
Trigger: CATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACACGGTGCAGGCAAGTaGGGACAAAAAGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIHGAGK*GQKGQA
Trigger: TGCTTGTCCTTTTTGTCCCCACTTGCCTGCACCGTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILLVTF*PKWAKE
Trigger: TTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTCACTGAGTGTACACTaGGCAGCCGTAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHSLSVH*AAVGST
Trigger: GGTCGAGCCTACGGCTGCCCAGTGTACACTCAGTGA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTTAAAAACCACGCGTaGAGGCTTCGTTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSFKNHA*RLRFLF
Trigger: AAATAGAAAACGAAGCCTCCACGCGTGGTTTTTAAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp CTCTTTTTAGTTTCTAGGTTTCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACCACCATGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFLVSRFLKSLR*TDTFCTTMPAP
Trigger: AGGAGCTGGCATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAGAAACCTAGAAACTAAAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp CAGGACAGATGGCCATCCGGTCATTCTGTTTTCATTTaGAAGAGCTCACTACCGTACAATTCCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QDRWPSGHSVFI*KSSLPYNSSCA
Trigger: AGCACAGCTGGAATTGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAATGACCGGATGGCCATCTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCATGCAATGCTTGTGTTaGGCAGAAGGTGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFMQCLC*AEGVRA
Trigger: AGCACGAACACCTTCTGCTCAACACAAGCATTGCAT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCGCCCAGCCAGGACTTaGAATTCTTACAGTAAGATG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRPART*NSYSKM
Trigger: CATCTTACTGTAAGAATTTCAAGTCCTGGCTGGGCG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSITHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTCACGAACTTCTCGATaGTCTAGCATCTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMISRTSR*SSILLG
Trigger: ACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCGATATTGCAGCCACTaGATGTCTCGCTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRYCSH*MSRWLC
Trigger: GCAAAGCCAGCGAGACATGCAGTGGCTGCAATATCG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFPNAYC*FSADSK
Trigger: CTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTCCAGGATTTATTGGTaGGAGGGGTGGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHSRIYW*EGWHGG
Trigger: CCCACCATGCCACCCCTCCCACCAATAAATCCTGGA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGTCGAGCACCACAAGTaGCTGGCAATTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIVEHHK*LAIADL
Trigger: CAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGAC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSWSLQ*NSSIVT
Trigger: AGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGTAATGCTGAAGAGGTaGAGGGGTAGGATGGAATTG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFVMLKR*RGRMEL
Trigger: CAATTCCATCCTACCCCTCCACCTCTTCAGCATTAC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGATGCAATTCAGCGCATaGTCAAGATGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQMQFSA*SRCFHS
Trigger: TGAATGGAAACATCTTGACCATGCGCTGAATTGCAT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTCTGTACTTCTGACATaGCCTGAATTTTCACCTTAT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSSVLLT*PEFSPY
Trigger: ATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFNSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGTGTGGACTTGTGGTaGCAAGATGTGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGVDLW*QDVSCF
Trigger: GAAACAGGACACATCTTGCCACCACAAGTCCACACC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMTFWPK*AKEIHA
Trigger: AGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMLRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIASSGS*KATLRG
Trigger: TCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTTTAAAAACCACGCGTaGAGGCTTCGTTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSFKNHA*RLRFLF
Trigger: AAATAGAAAACGAAGCCTCCACGCGTGGTTTTTAAA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCAGATGGATCCCAGATaGGAAGGTCCTGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIQMDPR*EGPAKQ
Trigger: CTGTTTGGCAGGACCTTCCCATCTGGGATCCATCTG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTTTGGGCAGCCAACATaGGAAGATCGCTTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMFGQPT*EDRFSP
Trigger: TGGGCTAAAGCGATCTTCCCATGTTGGCTGCCCAAA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
3UTR CAA 72 bp CACCCTAGACATGTCTGGCTGATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCTAGGTTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HPRHVWLMASHM*HLFLVSRFLKS
Trigger: GCTCTTCAGAAACCTAGAAACTAAAAAGAGATGCAACATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGCGTTTCAACTTGCTaGGTTGTCGAGCACCACAAG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISVSTC*VVEHHK
Trigger: CTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCGCCCAGCCAGGACTTaGAATTCTTACAGTAAGATG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRPART*NSYSKM
Trigger: CATCTTACTGTAAGAATTTCAAGTCCTGGCTGGGCG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGGATTCTTGAAATGTaGATAGAAGGTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGILEM*IEGPGQ
Trigger: CTGCCCAGGACCTTCTATTCACATTTCAAGAATCCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGGATTCTTGAAATGTaGATAGAAGGTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGILEM*IEGPGQ
Trigger: CTGCCCAGGACCTTCTATTCACATTTCAAGAATCCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCGTGCCCAGTCGGCTTaGCTTTATTTTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRAQSA*LYFQRK
Trigger: TTTCCTTTGAAAATAAAGTCAAGCCGACTGGGCACG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILFPFP*TSMSNS
Trigger: AGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMSVDSS*SLMTRK
Trigger: TTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMILDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATATGAGTCAGGCACGGTaGAGGCAAGTGGGGACAAAA +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHMSQAR*RQVGTK
Trigger: TTTTGTCCCCACTTGCCTGCACCGTGCCTGACTCAT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISPNAY*CFSADS
Trigger: GGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCACCCCACCTCCCAAATaGCCAAATTATAAACAATCC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMITPPPK*PNYKQS
Trigger: GGATTGTTTATAATTTGGGCATTTGGGAGGTGGGGT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTCCTCCAGGATTTATTaGTGGGAGGGGTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHSSRIY*WEGWHG
Trigger: ACCATGCCACCCCTCCCACCAATAAATCCTGGAGGA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAGCACCACAAGTGGCTaGCAATTGCTGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMSTTSG*QLLICE
Trigger: CTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGTCGAGCACCACAAGTaGCTGGCAATTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIVEHHK*LAIADL
Trigger: CAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGAC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIALASC*VPDTGE
Trigger: CTCACCTGTATCGGGAACCCAACAAGATGCTAGAGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATACGTATCCTGTACCTaGCCTGCTGTTGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIYVSCT*PAVELS
Trigger: AGAGAGTTCAACAGCAGGCCAGGTACAGGATACGTA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTACGTATCCTGTACCTaGCCTGCTGTTGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMYVSCT*PAVELS
Trigger: AGAGAGTTCAACAGCAGGCCAGGTACAGGATACGTA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTCTCTTAGCTCACGATaGAAAAGGTCACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMSLSSR*KRSPAP
Trigger: TGGTGCAGGTGACCTTTTCCATCGTGAGCTAAGAGA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTTCCCGATACAGGTaGGAAGTTGCAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGSRYR*EVAISS
Trigger: AGAGGATATTGCAACTTCTCACCTGTATCGGGAACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTACCTGGCCTGCTGTTaGACTCTCTCTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIYLACC*TLSENH
Trigger: ATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCAATTCCAGCTGTGCTaGACCTTCAAACGCACTTGT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIQFQLC*TFKRTC
Trigger: ACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATCACGAACTTCTCGATaGTCTAGCATCTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSISRTSR*SSILLG
Trigger: ACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTATTGCTGCTTCTCTaGCGACTCCAAGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILLLLL*RLQGRD
Trigger: ATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGCACCACAAGTGGCTaGCAATTGCTGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISTTSG*QLLICE
Trigger: CTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTTTAGACCAAGACTGTaGTGTCTATCACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIFRPRL*CLSRTS
Trigger: AGAAGTTCGTGATAGACACCACAGTCTTGGTCTAAA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCATGCAATTCAGCGCATaGTCAAGATGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIMQFSA*SRCFHS
Trigger: TGAATGGAAACATCTTGACCATGCGCTGAATTGCAT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAATGCATTCTGTGGGTaGTGTCACATTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSINAFCG*CHIHHP
Trigger: GGGATGATGAATGTGACACCACCCACAGAATGCATT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp ATGTGTTCCACAGCAAAGGAACATGATTCTCTGCTGTaGTTTCACTGGTCACACCTTACTTTAGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: MCSTAKEHDSLL*FHWSHLTLGNG
Trigger: TCCATTGCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTGGAACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGTCTTTTCCAGTAGTTaGGTTCTTCACGATCTGATT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFVFSSS*VLHDLI
Trigger: AATCAGATCGTGAAGAACTCAACTACTGGAAAAGAC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATCATTGCCAAACTGTTaGAGAGTGGTAAGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSISLPNC*RVVRKR
Trigger: ACGCTTTCTTACCACTCTGCAACAGTTTGGCAATGA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHTSAMV*SIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHPNAYC*FSADSK
Trigger: CTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAGCACCACAAGTGGCTaGCAATTGCTGATTTGTGAG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHSTTSG*QLLICE
Trigger: CTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTCTGTACTTCTGACATaGCCTGAATTTTCACCTTAT +
Preference number: 4 (lower is better)
Translates to: DCANSQVVAEVLHFQEMISVLLT*PEFSPY
Trigger: ATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHNSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAATGCATTCTGTGGGTaGTGTCACATTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFINAFCG*CHIHHP
Trigger: GGGATGATGAATGTGACACCACCCACAGAATGCATT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGTCTTTTCCAGTAGTTaGGTTCTTCACGATCTGATT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIVFSSS*VLHDLI
Trigger: AATCAGATCGTGAAGAACTCAACTACTGGAAAAGAC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSISERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGGGTAGGAGGAGAATaGTTGATGCCATTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRVGGE*LMPLLN
Trigger: ATTAAGCAATGGCATCAACCATTCTCCTCCTACCCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATGCAATTCAGCGCATaGTCAAGATGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIMQFSA*SRCFHS
Trigger: TGAATGGAAACATCTTGACCATGCGCTGAATTGCAT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCTGCTGTTGTTTCACTaGTCACACCTTACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLLLFH*SHLTLG
Trigger: GCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAATGCATTCTGTGGGTaGTGTCACATTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHNAFCG*CHIHHP
Trigger: GGGATGATGAATGTGACACCACCCACAGAATGCATT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGTCTTTTCCAGTAGTTaGGTTCTTCACGATCTGATT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIVFSSS*VLHDLI
Trigger: AATCAGATCGTGAAGAACTCAACTACTGGAAAAGAC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 4 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATACCCCACCTCCCAAATaGCCAAATTATAAACAATCC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHTPPPK*PNYKQS
Trigger: GGATTGTTTATAATTTGGGCATTTGGGAGGTGGGGT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTATGTTCCAAAAGATaGATGCAACATCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILCSKR*MQHHRY
Trigger: GTACCTGTGATGTTGCATTCATCTTTTGGAACATAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 4 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTCTGTACTTCTGACATaGCCTGAATTTTCACCTTAT +
Preference number: 4 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISVLLT*PEFSPY
Trigger: ATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMLFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 72 bp AGTTCTGCATTTCCAAGAGATGATCCACTCAATAATTaGACGATACTAGTTGGCCAACATGCTCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSAFPRDDPLNN*TILVGQHAQRK
Trigger: TTTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTTATGTTCCAAAAGATaGATGCAACATCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLCSKR*MQHHRY
Trigger: GTACCTGTGATGTTGCATTCATCTTTTGGAACATAA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS GCA 90 bp CTGGGCTGGGCACGCTGCAGTCGGCGGACCTGGCAGAGGAGCCCCTaGCTACAGGAAGCAGCGGCCGGCCCTGGCCGTGGGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: LGWARCSRRTWQRSP*LQEAAAGPGRGGSG
Trigger: GCCAGAGCCCCCACGGCCAGGGCCGGCCGCTGCTTCCTGTAGGCAGGGGCTCCTCTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 90 bp CCTCGACCCGCGGCCCGGGTCCCTCGCAGGCGTCGCCGCGAGATCTaGAGCCGCCGAGCTAACCAGACACCACCACCGCTGCTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: PRPAARVPRRRRREI*SRRANQTPPPLLSP
Trigger: CGGCGACAGCAGCGGTGGTGGTGTCTGGTTAGCTCGGCGGCTGCAGATCTCGCGGCGACGCCTGCGAGGGACCCGGGCCGCGGGTCGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342704.11
ENST00000471007.1
CDS-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTGGGATGGGGTCTGCTaGGCCGCCCGAGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGWDGVC*AARAQC
Trigger: GCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGGGATGGGGTCTGCTaGGCCGCCCGAGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWWDGVC*AARAQC
Trigger: GCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARNAMW*PRSCRG
Trigger: CCCTCGACAAGACCTCGGCAACCACATCGCGTTCCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTGGGATGGGGTCTGCTaGGCCGCCCGAGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQWDGVC*AARAQC
Trigger: GCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGGGATGGGGTCTGCTaGGCCGCCCGAGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSWDGVC*AARAQC
Trigger: GCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGGGCTCAGAGTCCGTaGGTGTCGATAGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGAQSP*VSIAVT
Trigger: TGTGACAGCTATCGACACCAACGGACTCTGAGCCCC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCCGAGATTGCGCGATaGCACTCCAGCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAAEIAR*HSSLGD
Trigger: GTCTCCCAGGCTGGAGTGCAATCGCGCAATCTCGGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATGGGATGGGGTCTGCTaGGCCGCCCGAGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGWDGVC*AARAQC
Trigger: GCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGCCGAGATTGCGCGATaGCACTCCAGCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQAEIAR*HSSLGD
Trigger: GTCTCCCAGGCTGGAGTGCAATCGCGCAATCTCGGC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTACCGTGAGCCGAGATaGCGCGATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAYREPR*RDCTPA
Trigger: GGCTGGAGTGCAATCGCGCAATCTCGGCTCACGGTA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGGGGTAGGATGGAATaGGCCCCCGGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARGRME*APGIHE
Trigger: CTCATGAATCCCGGGGGCCAATTCCATCCTACCCCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSAACR*TSAMVC
Trigger: GCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTGCCGCTCCCAGTCCTaGTGCTGGCAGAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGCRSQS*CWQKEP
Trigger: TGGCTCTTTCTGCCAGCACAAGGACTGGGAGCGGCA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRNAMW*PRSCRG
Trigger: CCCTCGACAAGACCTCGGCAACCACATCGCGTTCCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGGACTGAAGGCCTCTaGGCGCAGCAGCCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGTEGL*AQQPFQ
Trigger: TTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCCC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTGTAATCCCAGCACTTaGGGCAGCCAACATGGGAAG +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSACNPST*GSQHGK
Trigger: CTTCCCATGTTGGCTGCCCAAAGTGCTGGGATTACA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS TCA 90 bp ACGGGTTCCAACAGTCAGTCCCTCAGCCCAAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGCAGAGTCCGGGGCTCAGAGTCCGTT +
Preference number: 5 (lower is better)
Translates to: TGSNSQSLSPSTLWC*AAIRVSRVRGSESV
Trigger: AACGGACTCTGAGCCCCGGACTCTGCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCTTGGGCTGAGGGACTGACTGTTGGAACCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 90 bp AATTGGCCCCCGGGATTCATGAGGGGCACAGTGAGAGCAGGACTGTaGCGAGGAGCAGGGCTGATGGTACATACTCTCTTGGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: NWPPGFMRGTVRAGL*RGAGLMVHTLLAGG
Trigger: GCCTCCTGCCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGCACAGTCCTGCTCTCACTGTGCCCCTCATGAATCCCGGGGGCCAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS CCA 90 bp GGATCTGGACTGTATCTTCACTTCCACAGGCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACCAAGCTGGAAGGCGGCCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GSGLYLHFHRRSRHR*HPFLRTKLEGGRSR
Trigger: CCTGGAGCGGCCGCCTTCCAGCTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATACAGTCCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342704.11
ENST00000471007.1
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGAGGAGGCAGGACCATaGCTGAATCTCTGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVEEAGP*LNLCGG
Trigger: ACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGGGGTAGGATGGAATaGGCCCCCGGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRGRME*APGIHE
Trigger: CTCATGAATCCCGGGGGCCAATTCCATCCTACCCCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSAACR*TSAMVC
Trigger: GCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGGGCTCAGAGTCCGTaGGTGTCGATAGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGAQSP*VSIAVT
Trigger: TGTGACAGCTATCGACACCAACGGACTCTGAGCCCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGGGCTCAGAGTCCGTaGGTGTCGATAGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGAQSP*VSIAVT
Trigger: TGTGACAGCTATCGACACCAACGGACTCTGAGCCCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGGGCTCAGAGTCCGTaGGTGTCGATAGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGAQSP*VSIAVT
Trigger: TGTGACAGCTATCGACACCAACGGACTCTGAGCCCC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGGCCAGGTGTGGACTaGTGGTGGCAAGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWRPGVD*WWQDVS
Trigger: GGACACATCTTGCCACCACAAGTCCACACCTGGCCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS TCA 90 bp GGCTCAGAGTCCGTTGGTGTCGATAGCTGTCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGCCGAGGTCTTGTCGAGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GSESVGVDSCHRSRC*GTRCGCRGLVEGWA
Trigger: AGCCCAGCCCTCGACAAGACCTCGGCAACCACATCGCGTTCCTCAACACCTGCTTCTGTGACAGCTATCGACACCAACGGACTCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGAGGAGGCAGGACCATaGCTGAATCTCTGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSEEAGP*LNLCGG
Trigger: ACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGAAAGCGTTTCAACTaGCTGAGTTGTCGAGCACCA +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARKRFN*LSCRAP
Trigger: TGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGACATCCGCTATGGTTaGCTCCATTCGTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCADIRYG*LHSCSL
Trigger: GAGAGAGCACGAATGGAGCAAACCATAGCGGATGTC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCAGTATCGCGCGATATaGCAGCCACTGCATGTCTCG +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQQYRAI*QPLHVS
Trigger: CGAGACATGCAGTGGCTGCAATATCGCGCGATACTG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGCCGCTCCCAGTCCTaGTGCTGGCAGAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSCRSQS*CWQKEP
Trigger: TGGCTCTTTCTGCCAGCACAAGGACTGGGAGCGGCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRNAMW*PRSCRG
Trigger: CCCTCGACAAGACCTCGGCAACCACATCGCGTTCCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGCCGAGATTGCGCGATaGCACTCCAGCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRAEIAR*HSSLGD
Trigger: GTCTCCCAGGCTGGAGTGCAATCGCGCAATCTCGGC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGCCGAGATTGCGCGATaGCACTCCAGCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPAEIAR*HSSLGD
Trigger: GTCTCCCAGGCTGGAGTGCAATCGCGCAATCTCGGC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQEYCPG*QISLWA
Trigger: TGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGACATCTGGCATCTTaGGTCTTCTCTGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGHLAS*VFSGPC
Trigger: GCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGACATCTGGCATCTTaGGTCTTCTCTGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGHLAS*VFSGPC
Trigger: GCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSLVRK*ESHVKG
Trigger: CCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSLVRK*ESHVKG
Trigger: CCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGAGGAGGCAGGACCATaGCTGAATCTCTGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQEEAGP*LNLCGG
Trigger: ACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGATGGTACATACTCTCTaGGCAGGAGGCTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWMVHTL*AGGSGA
Trigger: TGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCAT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTCGTGCTCTCTCTGTaGCAATCACTTCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAFVLSL*QSLQRL
Trigger: AAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSAACR*TSAMVC
Trigger: GCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTGCCGCTCCCAGTCCTaGTGCTGGCAGAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPCRSQS*CWQKEP
Trigger: TGGCTCTTTCTGCCAGCACAAGGACTGGGAGCGGCA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGACCAGCTCTTCACCTaGCCAGAATCCCCAGATACA +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWDQLFT*PESPDT
Trigger: TGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGTC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATGTAATCCCAGCACTTaGGGCAGCCAACATGGGAAG +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARCNPST*GSQHGK
Trigger: CTTCCCATGTTGGCTGCCCAAAGTGCTGGGATTACA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTTTCAACTTGCTGAGTaGTCGAGCACCACAAGTGGC +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVFQLAE*SSTTSG
Trigger: GCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTGGGATGGGGTCTGCTaGGCCGCCCGAGCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIWDGVC*AARAQC
Trigger: GCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSSAACR*TSAMVC
Trigger: GCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGACTCCTCTTGCTCATaGATGACGAGGAAAGCATCC +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVDSSCS*MTRKAS
Trigger: GGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTGCCGCTCCCAGTCCTaGTGCTGGCAGAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSCRSQS*CWQKEP
Trigger: TGGCTCTTTCTGCCAGCACAAGGACTGGGAGCGGCA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRNAMW*PRSCRG
Trigger: CCCTCGACAAGACCTCGGCAACCACATCGCGTTCCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRNAMW*PRSCRG
Trigger: CCCTCGACAAGACCTCGGCAACCACATCGCGTTCCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTACCGTGAGCCGAGATaGCGCGATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATYREPR*RDCTPA
Trigger: GGCTGGAGTGCAATCGCGCAATCTCGGCTCACGGTA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSEYCPG*QISLWA
Trigger: TGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGACATCTGGCATCTTaGGTCTTCTCTGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGHLAS*VFSGPC
Trigger: GCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGCTTAAACAACTTCTaGAGTCACCTTCCCCACTGG +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGLNNF*SHLPHW
Trigger: CCAGTGGGGAAGGTGACTCAAGAAGTTGTTTAAGCC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGGCCAGGTGTGGACTaGTGGTGGCAAGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGRPGVD*WWQDVS
Trigger: GGACACATCTTGCCACCACAAGTCCACACCTGGCCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAACCTTCAAACGCACTaGTTGCGATATCCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSANLQTH*LRYPLE
Trigger: TTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAGGTAGTCAACGTTTaGGTTTCACAAGAACTACAG +
Preference number: 5 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQVVNV*VSQELQ
Trigger: CTGTAGTTCTTGTGAAACCAAAACGTTGACTACCTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGGACTGAAGGCCTCTaGGCGCAGCAGCCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGTEGL*AQQPFQ
Trigger: TTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGGACTGAAGGCCTCTaGGCGCAGCAGCCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGTEGL*AQQPFQ
Trigger: TTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSLVRK*ESHVKG
Trigger: CCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCAGGTACAGTCAGGATaGTGCTCCACAAAAACTACC +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAQVQSG*CSTKTT
Trigger: GGTAGTTTTTGTGGAGCACAATCCTGACTGTACCTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS TCA 90 bp TGGACTGGGCCTCTTCCCATTTCCGTGCACCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGCAATGCTTGTGTTGAGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: WTGPLPISVHLHEQL*RVSRRCNACVEQKV
Trigger: CACCTTCTGCTCAACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGAGGAGGCAGGACCATaGCTGAATCTCTGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATEEAGP*LNLCGG
Trigger: ACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACAAGTGGCTGGCAATaGCTGATTTGTGAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTSGWQ*LICECR
Trigger: TCTGCACTCACAAATCAGCAATTGCCAGCCACTTGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTTTCAACTTGCTGAGTaGTCGAGCACCACAAGTGGC +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSFQLAE*SSTTSG
Trigger: GCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAGGGGCAGGTTGGCCTaGAGAAATGGAATCACAAAA +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARRGRLA*RNGITK
Trigger: TTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGATGCAATGCTTGTGTaGAGCAGAAGGTGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSDAMLV*SRRCSC
Trigger: GCACGAACACCTTCTGCTCAACACAAGCATTGCATC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATGGTACATACTCTCTaGGCAGGAGGCTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQMVHTL*AGGSGA
Trigger: TGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGGGGTAGGATGGAATaGGCCCCCGGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRGRME*APGIHE
Trigger: CTCATGAATCCCGGGGGCCAATTCCATCCTACCCCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCGATGCTCTAGCATCTaGTTGGGTTCCCGATACAGG +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRCSSI*LGSRYR
Trigger: CCTGTATCGGGAACCCAACAAGATGCTAGAGCATCG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGACATCCGCTATGGTTaGCTCCATTCGTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSDIRYG*LHSCSL
Trigger: GAGAGAGCACGAATGGAGCAAACCATAGCGGATGTC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCAGTATCGCGCGATATaGCAGCCACTGCATGTCTCG +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPQYRAI*QPLHVS
Trigger: CGAGACATGCAGTGGCTGCAATATCGCGCGATACTG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCACAGAAGCAGGTGTaGAGGAACGCGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSQKQV*RNAMWL
Trigger: CAACCACATCGCGTTCCTCAACACCTGCTTCTGTGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPEYCPG*QISLWA
Trigger: TGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGEYCPG*QISLWA
Trigger: TGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTREYCPG*QISLWA
Trigger: TGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGGACATCTGGCATCTTaGGTCTTCTCTGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPGHLAS*VFSGPC
Trigger: GCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSLVRK*ESHVKG
Trigger: CCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGACCAGCTCTTCACCTaGCCAGAATCCCCAGATACA +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQDQLFT*PESPDT
Trigger: TGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGTC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCCGTGCCCAGTCGGCTaGACTTTATTTTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWPCPVG*TLFSKE
Trigger: TTCCTTTGAAAATAAAGTCAAGCCGACTGGGCACGG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS GCA 90 bp CTATTCTCTTCTCTCCTCTCTGGACTGGGCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCTGACGAGTCAGCAGGCGATGCAATG +
Preference number: 5 (lower is better)
Translates to: LFSSLLSGLGLFPFP*TSMSNSDESAGDAM
Trigger: CATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS GCA 90 bp CTCTGCGGCCTGCCGCTTGACATCCGCTATGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCACTTCAAAGGCTTTCTGCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LCGLPLDIRYGLLHS*SLCCNHFKGFLLCL
Trigger: GAGGCAGAGCAGAAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 90 bp GACTCCTCTTGCTCATTGATGACGAGGAAAGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATGGTTTGCTCCATTCGTGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: DSSCSLMTRKASSAA*RLTSAMVCSIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS CCA 90 bp GGATCTGGACTGTATCTTCACTTCCACAGGCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACCAACTGTAATCCCAGCACGTTGGGA +
Preference number: 5 (lower is better)
Translates to: GSGLYLHFHRRSRHR*HPFLRTNCNPSTLG
Trigger: TCCCAACGTGCTGGGATTACAGTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATACAGTCCAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359606.3
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGAATGGTTGATGCCATaGCTTAATGCAGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSAREWLMP*LNAVGV
Trigger: CACTCCTACTGCATTAAGCAATGGCATCAACCATTC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGAATGGTTGATGCCATaGCTTAATGCAGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWEWLMP*LNAVGV
Trigger: CACTCCTACTGCATTAAGCAATGGCATCAACCATTC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCATGGTACATACTCTCTaGGCAGGAGGCTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRMVHTL*AGGSGA
Trigger: TGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCAT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGATACAGGTGAGAAGTaGCAATATCCTCTAAGGTGT +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCADTGEK*QYPLRC
Trigger: ACACCTTAGAGGATATTGCAACTTCTCACCTGTATC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQSAACR*TSAMVC
Trigger: GCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRNAMW*PRSCRG
Trigger: CCCTCGACAAGACCTCGGCAACCACATCGCGTTCCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCACAGAAGCAGGTGTaGAGGAACGCGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSQKQV*RNAMWL
Trigger: CAACCACATCGCGTTCCTCAACACCTGCTTCTGTGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTCACAGAAGCAGGTGTaGAGGAACGCGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRSQKQV*RNAMWL
Trigger: CAACCACATCGCGTTCCTCAACACCTGCTTCTGTGA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATEYCPG*QISLWA
Trigger: TGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGLKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTTAAACAACTTCTaGAGTCACCTTCCCCACTGG +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGLNNF*SHLPHW
Trigger: CCAGTGGGGAAGGTGACTCAAGAAGTTGTTTAAGCC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGGACTGAAGGCCTCTaGGCGCAGCAGCCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGTEGL*AQQPFQ
Trigger: TTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCCC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLSLVRK*ESHVKG
Trigger: CCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATSLVRK*ESHVKG
Trigger: CCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATGTAATCCCAGCACTTaGGGCAGCCAACATGGGAAG +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGCNPST*GSQHGK
Trigger: CTTCCCATGTTGGCTGCCCAAAGTGCTGGGATTACA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAGGTACAGTCAGGATaGTGCTCCACAAAAACTACC +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQVQSG*CSTKTT
Trigger: GGTAGTTTTTGTGGAGCACAATCCTGACTGTACCTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACCCTTTCCATTGCCTaGCCAGGACCTGTATTTCTT +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTLSIA*PGPVFL
Trigger: AAGAAATACAGGTCCTGGCAAGGCAATGGAAAGGGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492345.5
CDS GCA 90 bp CCGCTTGACATCCGCTATGGTTTGCTCCATTCGTGCTCTCTCTGTTaGAATCACTTCAAAGGCTTTCTGCTCTGCCTCAGCGACGGCCTT +
Preference number: 5 (lower is better)
Translates to: PLDIRYGLLHSCSLC*NHFKGFLLCLSDGL
Trigger: AAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 90 bp GTCCCATTCCAGGGAAACACAGATGGATCCCAGATGGGAAGGTCCTaGCAAACAGACCAGCTCTTCACCTTGCCAGAATCCCCAGATACA +
Preference number: 5 (lower is better)
Translates to: VPFQGNTDGSQMGRS*QTDQLFTLPESPDT
Trigger: TGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGTCTGTTTGGCAGGACCTTCCCATCTGGGATCCATCTGTGTTTCCCTGGAATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS GCA 90 bp AGATGTATTATGCAGCTCTCTGGACTGGGCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCTGACGAGTCAGCAGGCGATGCAATG +
Preference number: 5 (lower is better)
Translates to: RCIMQLSGLGLFPFP*TSMSNSDESAGDAM
Trigger: CATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCAGAGAGCTGCATAATACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344201.7
ENST00000491618.1
CDS CCA 90 bp TTCTCACTGACTAGAGCTGCCTGTCCCATTCCAGGGAAACACAGATaGATCCCAGATGGGAAGGTCCTGCCAAACAGACCAGCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FSLTRAACPIPGKHR*IPDGKVLPNRPALH
Trigger: GTGAAGAGCTGGTCTGTTTGGCAGGACCTTCCCATCTGGGATCCATCTGTGTTTCCCTGGAATGGGACAGGCAGCTCTAGTCAGTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTTCAACTTGCTGAGTaGTCGAGCACCACAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRFQLAE*SSTTSG
Trigger: GCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGAAAGCGTTTCAACTaGCTGAGTTGTCGAGCACCA +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRKRFN*LSCRAP
Trigger: TGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCCTCAATTGTCACTGTaGAGTTCACCAGTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSPQLSL*SSPVQE
Trigger: TTCTTGCACTGGTGAACTCAACAGTGACAATTGAGG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGGGGCAGGTTGGCCTaGAGAAATGGAATCACAAAA +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRGRLA*RNGITK
Trigger: TTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGATGGTACATACTCTCTaGGCAGGAGGCTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLMVHTL*AGGSGA
Trigger: TGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCAT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGATACAGGTGAGAAGTaGCAATATCCTCTAAGGTGT +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWDTGEK*QYPLRC
Trigger: ACACCTTAGAGGATATTGCAACTTCTCACCTGTATC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGACATCCGCTATGGTTaGCTCCATTCGTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDIRYG*LHSCSL
Trigger: GAGAGAGCACGAATGGAGCAAACCATAGCGGATGTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGACTCCTCTTGCTCATaGATGACGAGGAAAGCATCC +
Preference number: 5 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRDSSCS*MTRKAS
Trigger: GGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCAGTATCGCGCGATATaGCAGCCACTGCATGTCTCG +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSQYRAI*QPLHVS
Trigger: CGAGACATGCAGTGGCTGCAATATCGCGCGATACTG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGGCCAGGTGTGGACTaGTGGTGGCAAGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRPGVD*WWQDVS
Trigger: GGACACATCTTGCCACCACAAGTCCACACCTGGCCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAACCTTCAAACGCACTaGTTGCGATATCCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARNLQTH*LRYPLE
Trigger: TTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCAGGTAGTCAACGTTTaGGTTTCACAAGAACTACAG +
Preference number: 5 (lower is better)
Translates to: GCPCAENGTLAPQTASAQQVVNV*VSQELQ
Trigger: CTGTAGTTCTTGTGAAACCAAAACGTTGACTACCTG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGGACCAACTTTCCATaGCCTTGCCAGGACCTGTAT +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGRTNFP*PCQDLY
Trigger: ATACAGGTCCTGGCAAGGCAATGGAAAGTTGGTCCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS GCA 90 bp AGGAAAGCATCCTCTGCGGCCTGCCGCTTGACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCTGTTGCAATCACTTCAAAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: RKASSAACRLTSAMV*SIRALSVAITSKAF
Trigger: GAAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAGAAAGCGTTTCAACTaGCTGAGTTGTCGAGCACCA +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPRKRFN*LSCRAP
Trigger: TGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGGGGCAGGTTGGCCTaGAGAAATGGAATCACAAAA +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGRGRLA*RNGITK
Trigger: TTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGATACAGGTGAGAAGTaGCAATATCCTCTAAGGTGT +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSDTGEK*QYPLRC
Trigger: ACACCTTAGAGGATATTGCAACTTCTCACCTGTATC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCGATGCTCTAGCATCTaGTTGGGTTCCCGATACAGG +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSRCSSI*LGSRYR
Trigger: CCTGTATCGGGAACCCAACAAGATGCTAGAGCATCG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTTCGTGCTCTCTCTGTaGCAATCACTTCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSFVLSL*QSLQRL
Trigger: AAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMISAACR*TSAMVC
Trigger: GCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGACTCCTCTTGCTCATaGATGACGAGGAAAGCATCC +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDSSCS*MTRKAS
Trigger: GGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAGTATCGCGCGATATaGCAGCCACTGCATGTCTCG +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQYRAI*QPLHVS
Trigger: CGAGACATGCAGTGGCTGCAATATCGCGCGATACTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAGTATCGCGCGATATaGCAGCCACTGCATGTCTCG +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQYRAI*QPLHVS
Trigger: CGAGACATGCAGTGGCTGCAATATCGCGCGATACTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: AASSLAEHIGQSADSRRWDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATACCGTGAGCCGAGATaGCGCGATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIYREPR*RDCTPA
Trigger: GGCTGGAGTGCAATCGCGCAATCTCGGCTCACGGTA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 5 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGACATCTGGCATCTTaGGTCTTCTCTGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGHLAS*VFSGPC
Trigger: GCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTA +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSLQTHL*RYPLEL
Trigger: TAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAGGTAGTCAACGTTTaGGTTTCACAAGAACTACAG +
Preference number: 5 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQVVNV*VSQELQ
Trigger: CTGTAGTTCTTGTGAAACCAAAACGTTGACTACCTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAACTTTCCATTGCCTaGCCAGGACCTGTATTTCTT +
Preference number: 5 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQLSIA*PGPVFL
Trigger: AAGAAATACAGGTCCTGGCAAGGCAATGGAAAGTTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGAATGGTTGATGCCATaGCTTAATGCAGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGEWLMP*LNAVGV
Trigger: CACTCCTACTGCATTAAGCAATGGCATCAACCATTC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGAGGAGGCAGGACCATaGCTGAATCTCTGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIEEAGP*LNLCGG
Trigger: ACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCACAAGTGGCTGGCAATaGCTGATTTGTGAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSTSGWQ*LICECR
Trigger: TCTGCACTCACAAATCAGCAATTGCCAGCCACTTGT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGGGGCAGGTTGGCCTaGAGAAATGGAATCACAAAA +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLRGRLA*RNGITK
Trigger: TTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGATGCAATGCTTGTGTaGAGCAGAAGGTGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSDAMLV*SRRCSC
Trigger: GCACGAACACCTTCTGCTCAACACAAGCATTGCATC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGATGGTACATACTCTCTaGGCAGGAGGCTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQMVHTL*AGGSGA
Trigger: TGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCAT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGGGGTAGGATGGAATaGGCCCCCGGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRGRME*APGIHE
Trigger: CTCATGAATCCCGGGGGCCAATTCCATCCTACCCCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCGATGCTCTAGCATCTaGTTGGGTTCCCGATACAGG +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRCSSI*LGSRYR
Trigger: CCTGTATCGGGAACCCAACAAGATGCTAGAGCATCG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTTCGTGCTCTCTCTGTaGCAATCACTTCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPFVLSL*QSLQRL
Trigger: AAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGACATCCGCTATGGTTaGCTCCATTCGTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERDIRYG*LHSCSL
Trigger: GAGAGAGCACGAATGGAGCAAACCATAGCGGATGTC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTCACAGAAGCAGGTGTaGAGGAACGCGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSQKQV*RNAMWL
Trigger: CAACCACATCGCGTTCCTCAACACCTGCTTCTGTGA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGGGGCTCAGAGTCCGTaGGTGTCGATAGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIGAQSP*VSIAVT
Trigger: TGTGACAGCTATCGACACCAACGGACTCTGAGCCCC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTACCGTGAGCCGAGATaGCGCGATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFYREPR*RDCTPA
Trigger: GGCTGGAGTGCAATCGCGCAATCTCGGCTCACGGTA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTA +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLQTHL*RYPLEL
Trigger: TAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCAGGTACAGTCAGGATaGTGCTCCACAAAAACTACC +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLQVQSG*CSTKTT
Trigger: GGTAGTTTTTGTGGAGCACAATCCTGACTGTACCTG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS TCA 90 bp ATTAGCTGGACATGTGTCAGCTCTCTCACATCTGCGATTTCTCACTaGCTAGAGCTGCCTGTCCCATTCCAGGGAAACACAGATGGATCC +
Preference number: 5 (lower is better)
Translates to: ISWTCVSSLTSAISH*LELPVPFQGNTDGS
Trigger: GGATCCATCTGTGTTTCCCTGGAATGGGACAGGCAGCTCTAGTCAGTGAGAAATCGCAGATGTGAGAGAGCTGACACATGTCCAGCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS TCA 90 bp GAGGCAGAAAAAGGTTGGGAGCACCGAAGGGCCTGGAAGTGGAGGTaGAAGAGAAGAATGCTAAAGCTAGGCAATGAAATGGACAGTCCA +
Preference number: 5 (lower is better)
Translates to: EAEKGWEHRRAWKWR*KRRMLKLGNEMDSP
Trigger: TGGACTGTCCATTTCATTGCCTAGCTTTAGCATTCTTCTCTTTCACCTCCACTTCCAGGCCCTTCGGTGCTCCCAACCTTTTTCTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS CCA 90 bp GGATCTGGACTGTATCTTCACTTCCACAGGCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACCAACCCAAATGCCCAAATTATAAAC +
Preference number: 5 (lower is better)
Translates to: GSGLYLHFHRRSRHR*HPFLRTNPNAQIIN
Trigger: GTTTATAATTTGGGCATTTGGGTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATACAGTCCAGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344201.7
ENST00000397800.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGTAGGAGGAGAATGGTaGATGCCATTGCTTAATGCA +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSVGGEW*MPLLNA
Trigger: TGCATTAAGCAATGGCATCAACCATTCTCCTCCTAC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGAGGCTCAGGAGCAATaGTGTCTCTATCAAAACTAT +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGEAQEQ*CLYQNY
Trigger: ATAGTTTTGATAGAGACACAATTGCTCCTGAGCCTC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGAGGCTCAGGAGCAATaGTGTCTCTATCAAAACTAT +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPEAQEQ*CLYQNY
Trigger: ATAGTTTTGATAGAGACACAATTGCTCCTGAGCCTC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTTCGTGCTCTCTCTGTaGCAATCACTTCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATFVLSL*QSLQRL
Trigger: AAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTGCCGCTCCCAGTCCTaGTGCTGGCAGAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMCRSQS*CWQKEP
Trigger: TGGCTCTTTCTGCCAGCACAAGGACTGGGAGCGGCA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGG +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIRNAMW*PRSCRG
Trigger: CCCTCGACAAGACCTCGGCAACCACATCGCGTTCCT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGCTTAAACAACTTCTaGAGTCACCTTCCCCACTGG +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGLNNF*SHLPHW
Trigger: CCAGTGGGGAAGGTGACTCAAGAAGTTGTTTAAGCC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAACTTTCCATTGCCTaGCCAGGACCTGTATTTCTT +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQLSIA*PGPVFL
Trigger: AAGAAATACAGGTCCTGGCAAGGCAATGGAAAGTTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGAGGAGGCAGGACCATaGCTGAATCTCTGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMEEAGP*LNLCGG
Trigger: ACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGAGAAAGCGTTTCAACTaGCTGAGTTGTCGAGCACCA +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERRKRFN*LSCRAP
Trigger: TGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGAAAGCGTTTCAACTaGCTGAGTTGTCGAGCACCA +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRKRFN*LSCRAP
Trigger: TGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCCTCAATTGTCACTGTaGAGTTCACCAGTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSPQLSL*SSPVQE
Trigger: TTCTTGCACTGGTGAACTCAACAGTGACAATTGAGG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGAGGCTCAGGAGCAATaGTGTCTCTATCAAAACTAT +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSEAQEQ*CLYQNY
Trigger: ATAGTTTTGATAGAGACACAATTGCTCCTGAGCCTC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGAGGCTCAGGAGCAATaGTGTCTCTATCAAAACTAT +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLEAQEQ*CLYQNY
Trigger: ATAGTTTTGATAGAGACACAATTGCTCCTGAGCCTC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCTTCGTGCTCTCTCTGTaGCAATCACTTCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSFVLSL*QSLQRL
Trigger: AAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAA...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGACATCCGCTATGGTTaGCTCCATTCGTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIDIRYG*LHSCSL
Trigger: GAGAGAGCACGAATGGAGCAAACCATAGCGGATGTC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGCCGCTCCCAGTCCTaGTGCTGGCAGAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFICRSQS*CWQKEP
Trigger: TGGCTCTTTCTGCCAGCACAAGGACTGGGAGCGGCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGCCGAGATTGCGCGATaGCACTCCAGCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHAEIAR*HSSLGD
Trigger: GTCTCCCAGGCTGGAGTGCAATCGCGCAATCTCGGC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LVVYTEKGPAKSASVERGMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTA +
Preference number: 5 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLQTHL*RYPLEL
Trigger: TAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAACCTTCAAACGCACTaGTTGCGATATCCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLNLQTH*LRYPLE
Trigger: TTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAACCTTCAAACGCACTaGTTGCGATATCCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATNLQTH*LRYPLE
Trigger: TTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCAGGTAGTCAACGTTTaGGTTTCACAAGAACTACAG +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLQVVNV*VSQELQ
Trigger: CTGTAGTTCTTGTGAAACCAAAACGTTGACTACCTG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCTCAATTGTCACTGTaGAGTTCACCAGTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPQLSL*SSPVQE
Trigger: TTCTTGCACTGGTGAACTCAACAGTGACAATTGAGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGATGCAATGCTTGTGTaGAGCAGAAGGTGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIDAMLV*SRRCSC
Trigger: GCACGAACACCTTCTGCTCAACACAAGCATTGCATC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGATGCAATGCTTGTGTaGAGCAGAAGGTGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIDAMLV*SRRCSC
Trigger: GCACGAACACCTTCTGCTCAACACAAGCATTGCATC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGGGGTAGGATGGAATaGGCCCCCGGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRGRME*APGIHE
Trigger: CTCATGAATCCCGGGGGCCAATTCCATCCTACCCCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGACATCCGCTATGGTTaGCTCCATTCGTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFDIRYG*LHSCSL
Trigger: GAGAGAGCACGAATGGAGCAAACCATAGCGGATGTC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACAGTATCGCGCGATATaGCAGCCACTGCATGTCTCG +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIQYRAI*QPLHVS
Trigger: CGAGACATGCAGTGGCTGCAATATCGCGCGATACTG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTACCGTGAGCCGAGATaGCGCGATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHYREPR*RDCTPA
Trigger: GGCTGGAGTGCAATCGCGCAATCTCGGCTCACGGTA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 5 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGACATCTGGCATCTTaGGTCTTCTCTGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGHLAS*VFSGPC
Trigger: GCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCAACCTTCAAACGCACTaGTTGCGATATCCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSNLQTH*LRYPLE
Trigger: TTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGACCAGCTCTTCACCTaGCCAGAATCCCCAGATACA +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFDQLFT*PESPDT
Trigger: TGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGTC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS CCA 90 bp GACTGTGGTGTCTATCACGAACTTCTCGATGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAGAAGTTGCAATATCCTCTAAGGTGT +
Preference number: 5 (lower is better)
Translates to: DCGVYHELLDALASC*VPDTGEKLQYPLRC
Trigger: ACACCTTAGAGGATATTGCAACTTCTCACCTGTATCGGGAACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGATAGACACCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAACAAGTGGCTGGCAATaGCTGATTTGTGAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAITSGWQ*LICECR
Trigger: TCTGCACTCACAAATCAGCAATTGCCAGCCACTTGT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGATGCAATGCTTGTGTaGAGCAGAAGGTGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFDAMLV*SRRCSC
Trigger: GCACGAACACCTTCTGCTCAACACAAGCATTGCATC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGAGGCTCAGGAGCAATaGTGTCTCTATCAAAACTAT +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQEAQEQ*CLYQNY
Trigger: ATAGTTTTGATAGAGACACAATTGCTCCTGAGCCTC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAGGGGTAGGATGGAATaGGCCCCCGGGATTCATGAG +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHRGRME*APGIHE
Trigger: CTCATGAATCCCGGGGGCCAATTCCATCCTACCCCT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACGATGCTCTAGCATCTaGTTGGGTTCCCGATACAGG +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIRCSSI*LGSRYR
Trigger: CCTGTATCGGGAACCCAACAAGATGCTAGAGCATCG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGACATCCGCTATGGTTaGCTCCATTCGTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIDIRYG*LHSCSL
Trigger: GAGAGAGCACGAATGGAGCAAACCATAGCGGATGTC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATCACAGAAGCAGGTGTaGAGGAACGCGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSISQKQV*RNAMWL
Trigger: CAACCACATCGCGTTCCTCAACACCTGCTTCTGTGA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGGGGCTCAGAGTCCGTaGGTGTCGATAGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHGAQSP*VSIAVT
Trigger: TGTGACAGCTATCGACACCAACGGACTCTGAGCCCC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 5 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMLKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS GCA 90 bp GGAGCAATTGTGTCTCTATCAAAACTATTCTCTTCTCTCCGGGTGTaGAGGCATCTGAAGAGTTCCCGAAAAATACTCATGTCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: GAIVSLSKLFSSLRV*RHLKSSRKILMSGS
Trigger: GCTTCCAGACATGAGTATTTTTCGGGAACTCTTCAGATGCCTGCACACCCGGAGAGAAGAGAATAGTTTTGATAGAGACACAATTGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491618.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATTTCAACTTGCTGAGTaGTCGAGCACCACAAGTGGC +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIFQLAE*SSTTSG
Trigger: GCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGGGGCAGGTTGGCCTaGAGAAATGGAATCACAAAA +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRGRLA*RNGITK
Trigger: TTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCGATGCTCTAGCATCTaGTTGGGTTCCCGATACAGG +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRCSSI*LGSRYR
Trigger: CCTGTATCGGGAACCCAACAAGATGCTAGAGCATCG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATTCGTGCTCTCTCTGTaGCAATCACTTCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIFVLSL*QSLQRL
Trigger: AAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGACTCCTCTTGCTCATaGATGACGAGGAAAGCATCC +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMDSSCS*MTRKAS
Trigger: GGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTCACAGAAGCAGGTGTaGAGGAACGCGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISQKQV*RNAMWL
Trigger: CAACCACATCGCGTTCCTCAACACCTGCTTCTGTGA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMICYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGCTTAAACAACTTCTaGAGTCACCTTCCCCACTGG +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGLNNF*SHLPHW
Trigger: CCAGTGGGGAAGGTGACTCAAGAAGTTGTTTAAGCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGCTTAAACAACTTCTaGAGTCACCTTCCCCACTGG +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGLNNF*SHLPHW
Trigger: CCAGTGGGGAAGGTGACTCAAGAAGTTGTTTAAGCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAGGACCAACTTTCCATaGCCTTGCCAGGACCTGTAT +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRTNFP*PCQDLY
Trigger: ATACAGGTCCTGGCAAGGCAATGGAAAGTTGGTCCT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346541.7
ENST00000375279.6
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCACACATTCCATATGTTaGAGCCTCAGCCCAATGAGA +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMITHSIC*SLSPMR
Trigger: TCTCATTGGGCTGAGGCTCAAACATATGGAATGTGT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS TCA 90 bp TGTCTCTATCAAAACTATTCTCTTCTCTCCGGGTGTGCAGGCATCTaGAGAGTTCCCGAAAAATACTCATGTCTGGAAGCTACTCCCATA +
Preference number: 5 (lower is better)
Translates to: CLYQNYSLLSGCAGI*RVPEKYSCLEATPI
Trigger: TATGGGAGTAGCTTCCAGACATGAGTATTTTTCGGGAACTCTTCAGATGCCTGCACACCCGGAGAGAAGAGAATAGTTTTGATAGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491618.1
CDS CCA 90 bp ACAAAAGGACGAAGGGGAAAGTTTGTGGCTTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACTGTTGAGTTCACCAGTGCAAGAACA +
Preference number: 5 (lower is better)
Translates to: TKGRRGKFVASWSLQ*NSSIVTVEFTSART
Trigger: TGTTCTTGCACTGGTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCCTCAATTGTCACTGTaGAGTTCACCAGTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFPQLSL*SSPVQE
Trigger: TTCTTGCACTGGTGAACTCAACAGTGACAATTGAGG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAGGGGCAGGTTGGCCTaGAGAAATGGAATCACAAAA +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMRGRLA*RNGITK
Trigger: TTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGACTCCTCTTGCTCATaGATGACGAGGAAAGCATCC +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIDSSCS*MTRKAS
Trigger: GGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 5 (lower is better)
Translates to: QLEQGQLNLLQLISGCERIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTTCAAACGCACTTGTaGCGATATCCTCTAGAACTA +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILQTHL*RYPLEL
Trigger: TAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS TCA 90 bp CATAAATTCTCTAGAGTAGAGTTTCTTACCGGGTGTGCAGGCATCTaGAGAGTTCCCGAAAAATACTCATGTCTGGAAGCTACTCCCATA +
Preference number: 5 (lower is better)
Translates to: HKFSRVEFLTGCAGI*RVPEKYSCLEATPI
Trigger: TATGGGAGTAGCTTCCAGACATGAGTATTTTTCGGGAACTCTTCAGATGCCTGCACACCCGGTAAGAAACTCTACTCTAGAGAATTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344201.7
CDS CCA 90 bp AGAAATGGAATCACAAAAGGACGAAGGGGAAAGTTTGTGGCTTCTTaGAGCTTACAGTGGAATTCCTCAATTGTCACTGTTGAGTTCACC +
Preference number: 5 (lower is better)
Translates to: RNGITKGRRGKFVAS*SLQWNSSIVTVEFT
Trigger: GGTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTTTGTGATTCCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCACAAGTGGCTGGCAATaGCTGATTTGTGAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFITSGWQ*LICECR
Trigger: TCTGCACTCACAAATCAGCAATTGCCAGCCACTTGT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATTTTCAACTTGCTGAGTaGTCGAGCACCACAAGTGGC +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHFQLAE*SSTTSG
Trigger: GCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAA...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACCTCAATTGTCACTGTaGAGTTCACCAGTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIPQLSL*SSPVQE
Trigger: TTCTTGCACTGGTGAACTCAACAGTGACAATTGAGG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSICYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSINTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCAGGTAGTCAACGTTTaGGTTTCACAAGAACTACAG +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFQVVNV*VSQELQ
Trigger: CTGTAGTTCTTGTGAAACCAAAACGTTGACTACCTG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATACAAGTGGCTGGCAATaGCTGATTTGTGAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHTSGWQ*LICECR
Trigger: TCTGCACTCACAAATCAGCAATTGCCAGCCACTTGT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGATACAGGTGAGAAGTaGCAATATCCTCTAAGGTGT +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIDTGEK*QYPLRC
Trigger: ACACCTTAGAGGATATTGCAACTTCTCACCTGTATC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 5 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGAACCTTCAAACGCACTaGTTGCGATATCCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMNLQTH*LRYPLE
Trigger: TTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTT...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS TCA 90 bp GATTCTTTAGCCATTCACCTGGTGATCTGCTTATGTTCCAAAAGATaGATGCAACATCACAGGTACAGTCAGGATTGTGCTCCACAAAAA +
Preference number: 5 (lower is better)
Translates to: DSLAIHLVICLCSKR*MQHHRYSQDCAPQK
Trigger: TTTTTGTGGAGCACAATCCTGACTGTACCTGTGATGTTGCATTCATCTTTTGGAACATAAGCAGATCACCAGGTGAATGGCTAAAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGAATGGTTGATGCCATaGCTTAATGCAGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHEWLMP*LNAVGV
Trigger: CACTCCTACTGCATTAAGCAATGGCATCAACCATTC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGATACAGGTGAGAAGTaGCAATATCCTCTAAGGTGT +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIDTGEK*QYPLRC
Trigger: ACACCTTAGAGGATATTGCAACTTCTCACCTGTATC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTA +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILQTHL*RYPLEL
Trigger: TAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGAGGCTCAGGAGCAATaGTGTCTCTATCAAAACTAT +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHEAQEQ*CLYQNY
Trigger: ATAGTTTTGATAGAGACACAATTGCTCCTGAGCCTC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGATACAGGTGAGAAGTaGCAATATCCTCTAAGGTGT +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHDTGEK*QYPLRC
Trigger: ACACCTTAGAGGATATTGCAACTTCTCACCTGTATC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCAGGTAGTCAACGTTTaGGTTTCACAAGAACTACAG +
Preference number: 5 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHQVVNV*VSQELQ
Trigger: CTGTAGTTCTTGTGAAACCAAAACGTTGACTACCTG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 5 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS CCA 72 bp GGAACGCGATGTGGTTGCCGAGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTCGGCGGACCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: GTRCGCRGLVEG*AGHAAVGGPGR
Trigger: TCTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACCTCGGCAACCACATCGCGTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 72 bp TGCTTGGCCGCCCGAGCGCAGTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCCTTGAGAAATGGAATC +
Preference number: 6 (lower is better)
Translates to: CLAARAQCSSSR*SRGRLALRNGI
Trigger: GATTCCATTTCTCAAGGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGCCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS CAA 72 bp CTGTCACAGAAGCAGGTGTTGAGGAACGCGATGTGGTaGCCGAGGTCTTGTCGAGGGCTGGGCTGGGCACGC +
Preference number: 6 (lower is better)
Translates to: LSQKQVLRNAMW*PRSCRGLGWAR
Trigger: GCGTGCCCAGCCCAGCCCTCGACAAGACCTCGGCAACCACATCGCGTTCCTCAACACCTGCTTCTGTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS TCA 72 bp AACAGTCAGTCCCTCAGCCCAAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGCAGAGTCCGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: NSQSLSPSTLWC*AAIRVSRVRGS
Trigger: TGAGCCCCGGACTCTGCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCTTGGGCTGAGGGACTGACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS TCA 72 bp CTGGACTGGGCCTCTTCCCATTTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAGCAGGCGATGCAATGC +
Preference number: 6 (lower is better)
Translates to: LDWASSHFRAPP*ATLTSQQAMQC
Trigger: GCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS GCA 72 bp TCTCTCCTCTCTGGACTGGGCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCTGACGAGTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: SLLSGLGLFPFP*TSMSNSDESAG
Trigger: GCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS GCA 72 bp TCATTGCTGAGAGAATCTGCACTCCCAGGGCTGTGCTaGCTGGAGACCAACTCGGTCCCCGTTTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SLLRESALPGLC*LETNSVPVFLS
Trigger: GCTGAGGAAAACGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS GCA 72 bp CGGCCACAGTTCCAGCAGTTCTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAAGCATCCTCTGCGGCC +
Preference number: 6 (lower is better)
Translates to: RPQFQQFSVDSS*SLMTRKASSAA
Trigger: GGCCGCAGAGGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGAGAACTGCTGGAACTGTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 72 bp ATGCAGCTCTCTGGACTGGGCCTCTTCCCATTTCCGTaGACCTCCATGAGCAACTCTGACGAGTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: MQLSGLGLFPFP*TSMSNSDESAG
Trigger: GCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCAGAGAGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344201.7
ENST00000491618.1
CDS CCA 72 bp CTGTATCTTCACTTCCACAGGCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACCAAGCTGGAAGGCGGC +
Preference number: 6 (lower is better)
Translates to: LYLHFHRRSRHR*HPFLRTKLEGG
Trigger: GCCGCCTTCCAGCTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342704.11
ENST00000471007.1
CDS CAA 72 bp CAGTTCCAGCAGTTCTCCGTGGACTCCTCTTGCTCATaGATGACGAGGAAAGCATCCTCTGCGGCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: QFQQFSVDSSCS*MTRKASSAACR
Trigger: GCGGCAGGCCGCAGAGGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGAGAACTGCTGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS CAA 72 bp GCGGCCACAGTTCCAGCAGTTCTCCGTGGACTCCTCTaGCTCATTGATGACGAGGAAAGCATCCTCTGCGGC +
Preference number: 6 (lower is better)
Translates to: AATVPAVLRGLL*LIDDEESILCG
Trigger: GCCGCAGAGGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGAGAACTGCTGGAACTGTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS TCA 72 bp ACTCTGACGAGTCAGCAGGCGATGCAATGCTTGTGTTaGGCAGAAGGTGTTCGTGCTGAGCCAGGTACTGGG +
Preference number: 6 (lower is better)
Translates to: TLTSQQAMQCLC*AEGVRAEPGTG
Trigger: CCCAGTACCTGGCTCAGCACGAACACCTTCTGCTCAACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS TCA 72 bp TCCGTTGGTGTCGATAGCTGTCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGCCGAGGTCTTGTCGAG +
Preference number: 6 (lower is better)
Translates to: SVGVDSCHRSRC*GTRCGCRGLVE
Trigger: CTCGACAAGACCTCGGCAACCACATCGCGTTCCTCAACACCTGCTTCTGTGACAGCTATCGACACCAACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS CAA 72 bp TTGATGACGAGGAAAGCATCCTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGCTCCATTCGTGCTCTC +
Preference number: 6 (lower is better)
Translates to: LMTRKASSAACR*TSAMVCSIRAL
Trigger: GAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGCTTTCCTCGTCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS TCA 72 bp CCTCTTCCCATTTCCGTGCACCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGCAATGCTTGTGTTGAG +
Preference number: 6 (lower is better)
Translates to: PLPISVHLHEQL*RVSRRCNACVE
Trigger: CTCAACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS GCA 72 bp TCCTCTGCGGCCTGCCGCTTGACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCTGTTGCAATCACTTCA +
Preference number: 6 (lower is better)
Translates to: SSAACRLTSAMV*SIRALSVAITS
Trigger: TGAAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 72 bp TGCTCATTGATGACGAGGAAAGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATGGTTTGCTCCATTCGT +
Preference number: 6 (lower is better)
Translates to: CSLMTRKASSAA*RLTSAMVCSIR
Trigger: ACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGCTTTCCTCGTCATCAATGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 72 bp CAGGGAAACACAGATGGATCCCAGATGGGAAGGTCCTaGCAAACAGACCAGCTCTTCACCTTGCCAGAATCC +
Preference number: 6 (lower is better)
Translates to: QGNTDGSQMGRS*QTDQLFTLPES
Trigger: GGATTCTGGCAAGGTGAAGAGCTGGTCTGTTTGGCAGGACCTTCCCATCTGGGATCCATCTGTGTTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS CCA 72 bp CTGTCCCATTCCAGGGAAACACAGATGGATCCCAGATaGGAAGGTCCTGCCAAACAGACCAGCTCTTCACCT +
Preference number: 6 (lower is better)
Translates to: LSHSRETQMDPR*EGPAKQTSSSP
Trigger: AGGTGAAGAGCTGGTCTGTTTGGCAGGACCTTCCCATCTGGGATCCATCTGTGTTTCCCTGGAATGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS CCA 72 bp CTGTATCTTCACTTCCACAGGCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACCAACCCAAATGCCCAA +
Preference number: 6 (lower is better)
Translates to: LYLHFHRRSRHR*HPFLRTNPNAQ
Trigger: TTGGGCATTTGGGTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344201.7
ENST00000397800.5
CDS CCA 72 bp CTGTATCTTCACTTCCACAGGCGATCCAGGCATCGCTaGCACCCTTTTCTCAGGACCAACTGTAATCCCAGC +
Preference number: 6 (lower is better)
Translates to: LYLHFHRRSRHR*HPFLRTNCNPS
Trigger: GCTGGGATTACAGTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359606.3
CDS CAA 72 bp CTGTGCCGAGGAGCAGGGCTGATGGTACATACTCTCTaGGCAGGAGGCTCAGGAGCAATTGTGTCTCTATCA +
Preference number: 6 (lower is better)
Translates to: LCRGAGLMVHTL*AGGSGAIVSLS
Trigger: TGATAGAGACACAATTGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS CAA 90 bp TCTTGCTCATTGATGACGAGGAAAGCATCCTCTGCGGCCTGCCGCTaGACATCCGCTATGGTTTGCTCCATTCGTGCTCTCTCTGTTGCA +
Preference number: 6 (lower is better)
Translates to: SCSLMTRKASSAACR*TSAMVCSIRALSVA
Trigger: TGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGCTTTCCTCGTCATCAATGAGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS TCA 72 bp CTGAGTTGTCGAGCACCACAAGTGGCTGGCAATTGCTaGTTTGTGAGTGCAGATGATGTGGAGGAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LSCRAPQVAGNC*FVSADDVEEAG
Trigger: TCCTGCCTCCTCCACATCATCTGCACTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGACAACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000471007.1
ENST00000492345.5
CDS CCA 72 bp GGCGGTGATGGGGCACCATTCAGGGTAGGAGGAGAATaGTTGATGCCATTGCTTAATGCAGTAGGAGTGAAG +
Preference number: 6 (lower is better)
Translates to: GGDGAPFRVGGE*LMPLLNAVGVK
Trigger: CTTCACTCCTACTGCATTAAGCAATGGCATCAACCATTCTCCTCCTACCCTGAATGGTGCCCCATCACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000471007.1
ENST00000492345.5
CDS CAA 90 bp AGAGCAGGACTGTGCCGAGGAGCAGGGCTGATGGTACATACTCTCTaGGCAGGAGGCTCAGGAGCAATTGTGTCTCTATCAAAACTATTC +
Preference number: 6 (lower is better)
Translates to: RAGLCRGAGLMVHTL*AGGSGAIVSLSKLF
Trigger: GAATAGTTTTGATAGAGACACAATTGCTCCTGAGCCTCCTGCCAAGAGAGTATGTACCATCAGCCCTGCTCCTCGGCACAGTCCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS TCA 72 bp GTACCGTCTTTTCCAGTAGTTGAGTTCTTCACGATCTaGTTCCTGACAGCGCCGCAGAACTGCCATAGAGCG +
Preference number: 6 (lower is better)
Translates to: VPSFPVVEFFTI*FLTAPQNCHRA
Trigger: CGCTCTATGGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTCAACTACTGGAAAAGACGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS GCA 72 bp TGGGAAGGTCCTGCCAAACAGACCAGCTCTTCACCTTaGCAGAATCCCCAGATACAGTCAGTCTCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: WEGPAKQTSSSP*QNPQIQSVSLF
Trigger: AAAGAGAGAGACTGACTGTATCTGGGGATTCTGGCAAGGTGAAGAGCTGGTCTGTTTGGCAGGACCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
CDS TCA 72 bp ACAAGTGGCTGGCAATTGCTGATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACCATTGCTGAATCTCTG +
Preference number: 6 (lower is better)
Translates to: TSGWQLLICECR*CGGGRTIAESL
Trigger: CAGAGATTCAGCAATGGTCCTGCCTCCTCCACATCATCTGCACTCACAAATCAGCAATTGCCAGCCACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000471007.1
ENST00000492345.5
CDS TCA 72 bp ACATGTGTCAGCTCTCTCACATCTGCGATTTCTCACTaGCTAGAGCTGCCTGTCCCATTCCAGGGAAACACA +
Preference number: 6 (lower is better)
Translates to: TCVSSLTSAISH*LELPVPFQGNT
Trigger: TGTGTTTCCCTGGAATGGGACAGGCAGCTCTAGTCAGTGAGAAATCGCAGATGTGAGAGAGCTGACACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS GCA 72 bp ATCCGCTATGGTTTGCTCCATTCGTGCTCTCTCTGTTaGAATCACTTCAAAGGCTTTCTGCTCTGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: IRYGLLHSCSLC*NHFKGFLLCLS
Trigger: GCTGAGGCAGAGCAGAAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS GCA 72 bp CTGCCGCTTGACATCCGCTATGGTTTGCTCCATTCGTaGTCTCTCTGTTGCAATCACTTCAAAGGCTTTCTG +
Preference number: 6 (lower is better)
Translates to: LPLDIRYGLLHS*SLCCNHFKGFL
Trigger: CAGAAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS CCA 72 bp CAATCGGAGACCAGCCTTCCTCCTCCTTTCATTAGCTaGACATGTGTCAGCTCTCTCACATCTGCGATTTCT +
Preference number: 6 (lower is better)
Translates to: QSETSLPPPFIS*TCVSSLTSAIS
Trigger: AGAAATCGCAGATGTGAGAGAGCTGACACATGTCCAGCTAATGAAAGGAGGAGGAAGGCTGGTCTCCGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344201.7
ENST00000346541.7
ENST00000397800.5
ENST00000492345.5
CDS CAA 90 bp GCCAAACTGTTGCAGAGTGGTAAGAAAGCGTTTCAACTTGCTGAGTaGTCGAGCACCACAAGTGGCTGGCAATTGCTGATTTGTGAGTGC +
Preference number: 6 (lower is better)
Translates to: AKLLQSGKKAFQLAE*SSTTSGWQLLICEC
Trigger: GCACTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAACAGTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000471007.1
ENST00000492345.5
CDS GCA 72 bp AGCCTGAGTGACAGGGTGAGACCCTTTCCATTGCCTTaGCAGGACCTGTATTTCTTTCAAGCTTATTCCAGA +
Preference number: 6 (lower is better)
Translates to: SLSDRVRPFPLP*QDLYFFQAYSR
Trigger: TCTGGAATAAGCTTGAAAGAAATACAGGTCCTGGCAAGGCAATGGAAAGGGTCTCACCCTGTCACTCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492345.5
CDS CAA 72 bp CCAAACTGTTGCAGAGTGGTAAGAAAGCGTTTCAACTaGCTGAGTTGTCGAGCACCACAAGTGGCTGGCAAT +
Preference number: 6 (lower is better)
Translates to: PNCCRVVRKRFN*LSCRAPQVAGN
Trigger: ATTGCCAGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAACAGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000471007.1
ENST00000492345.5
CDS TCA 72 bp GCTCTGTGTTTTCATTGTACCGTCTTTTCCAGTAGTTaGGTTCTTCACGATCTGATTCCTGACAGCGCCGCA +
Preference number: 6 (lower is better)
Translates to: ALCFHCTVFSSS*VLHDLIPDSAA
Trigger: TGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTCAACTACTGGAAAAGACGGTACAATGAAAACACAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS CAA 72 bp TTGCAGAGTGGTAAGAAAGCGTTTCAACTTGCTGAGTaGTCGAGCACCACAAGTGGCTGGCAATTGCTGATT +
Preference number: 6 (lower is better)
Translates to: LQSGKKAFQLAE*SSTTSGWQLLI
Trigger: AATCAGCAATTGCCAGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000471007.1
ENST00000492345.5
CDS TCA 72 bp CAAAACTATTCTCTTCTCTCCGGGTGTGCAGGCATCTaGAGAGTTCCCGAAAAATACTCATGTCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: QNYSLLSGCAGI*RVPEKYSCLEA
Trigger: AGCTTCCAGACATGAGTATTTTTCGGGAACTCTTCAGATGCCTGCACACCCGGAGAGAAGAGAATAGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491618.1
CDS CCA 72 bp CGAAGGGGAAAGTTTGTGGCTTCTTGGAGCTTACAGTaGAATTCCTCAATTGTCACTGTTGAGTTCACCAGT +
Preference number: 6 (lower is better)
Translates to: RRGKFVASWSLQ*NSSIVTVEFTS
Trigger: ACTGGTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS CCA 72 bp GTCTATCACGAACTTCTCGATGCTCTAGCATCTTGTTaGGTTCCCGATACAGGTGAGAAGTTGCAATATCCT +
Preference number: 6 (lower is better)
Translates to: VYHELLDALASC*VPDTGEKLQYP
Trigger: AGGATATTGCAACTTCTCACCTGTATCGGGAACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGATAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000491618.1
ENST00000492345.5
CDS TCA 72 bp ACAAACAGCATCAAGGAAAAGGCAGAACTGTACTCCTaGGGCTTCTGGAACAGTCGACCCATAAATTCTCTA +
Preference number: 6 (lower is better)
Translates to: TNSIKEKAELYS*GFWNSRPINSL
Trigger: TAGAGAATTTATGGGTCGACTGTTCCAGAAGCCTCAGGAGTACAGTTCTGCCTTTTCCTTGATGCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344201.7
CDS TCA 72 bp GCCATTCACCTGGTGATCTGCTTATGTTCCAAAAGATaGATGCAACATCACAGGTACAGTCAGGATTGTGCT +
Preference number: 6 (lower is better)
Translates to: AIHLVICLCSKR*MQHHRYSQDCA
Trigger: AGCACAATCCTGACTGTACCTGTGATGTTGCATTCATCTTTTGGAACATAAGCAGATCACCAGGTGAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS CAA 72 bp TTGTGGCTTCTTGGAGCTTACAGTGGAATTCCTCAATaGTCACTGTTGAGTTCACCAGTGCAAGAACAAGAG +
Preference number: 6 (lower is better)
Translates to: LWLLGAYSGIPQ*SLLSSPVQEQE
Trigger: CTCTTGTTCTTGCACTGGTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGAAGCCACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS CCA 72 bp ATCACAAAAGGACGAAGGGGAAAGTTTGTGGCTTCTTaGAGCTTACAGTGGAATTCCTCAATTGTCACTGTT +
Preference number: 6 (lower is better)
Translates to: ITKGRRGKFVAS*SLQWNSSIVTV
Trigger: AACAGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTTTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000344201.7
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS GCA 72 bp AAGATGAATGCAACATCACAGGTACAGTCAGGATTGTaGTCCACAAAAACTACCATCCTCAATCTTCATCAT +
Preference number: 6 (lower is better)
Translates to: KMNATSQVQSGL*STKTTILNLHH
Trigger: ATGATGAAGATTGAGGATGGTAGTTTTTGTGGAGCACAATCCTGACTGTACCTGTGATGTTGCATTCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS CAA 72 bp CAAAAGATGAATGCAACATCACAGGTACAGTCAGGATaGTGCTCCACAAAAACTACCATCCTCAATCTTCAT +
Preference number: 6 (lower is better)
Translates to: QKMNATSQVQSG*CSTKTTILNLH
Trigger: ATGAAGATTGAGGATGGTAGTTTTTGTGGAGCACAATCCTGACTGTACCTGTGATGTTGCATTCATCTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS CAA 90 bp CTTATGTTCCAAAAGATGAATGCAACATCACAGGTACAGTCAGGATaGTGCTCCACAAAAACTACCATCCTCAATCTTCATCATAATATC +
Preference number: 6 (lower is better)
Translates to: LMFQKMNATSQVQSG*CSTKTTILNLHHNI
Trigger: GATATTATGATGAAGATTGAGGATGGTAGTTTTTGTGGAGCACAATCCTGACTGTACCTGTGATGTTGCATTCATCTTTTGGAACATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5