RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBFA2T2 (Homo sapiens)

Ensembl gene IDs: ENSG00000078699

Ensembl transcript IDs: ENST00000342704.11, ENST00000344201.7, ENST00000346541.7, ENST00000359606.3, ENST00000375279.6, ENST00000397800.5, ENST00000471007.1, ENST00000491618.1, ENST00000492345.5, ENST00000543126.1

Found 1925 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGAAGGGCCCTGCGGAGCCGCTGGCACAGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTGGA +
Preference number: 1 (lower is better)
Translates to: LEGPCGAAGTAPTAI*AGLLSTAGHLARAG
Trigger: TCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp CCTGCGGAGCCGCTGGCACAGCCCCCACCGCAATCTGGGCAGGGCTaGTCTCGACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATG +
Preference number: 1 (lower is better)
Translates to: PAEPLAQPPPQSGQG*SRQLAIWPVLEQSM
Trigger: CATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp CCCCCACCGCAATCTGGGCAGGGCTGCTCTCGACAGCTGGCCATCTaGCCCGTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGT +
Preference number: 1 (lower is better)
Translates to: PPPQSGQGCSRQLAI*PVLEQSMLRWLFFR
Trigger: ACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp AAGAACTACAGACACTCCAGAGTTGGAAGGGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAATCTGGGCAGGGCTGCTCTCGACAGC +
Preference number: 1 (lower is better)
Translates to: KNYRHSRVGRALRSR*HSPHRNLGRAALDS
Trigger: GCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTGTAGTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp TGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCCCGCCCCAATGGTGCTCCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: CQQRLGTTQGTWIRS*ASSCLPRPNGAPPP
Trigger: AGGAGGAGGAGCACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp AGCCATGGAGGAGGCAGCTCAGGCTGGCTGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: SHGGGSSGWLPMCRE*HTGSADSKCTERLW
Trigger: CCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCCTCCATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CGCAATCTGGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTC +
Preference number: 1 (lower is better)
Translates to: RNLGRAALDSWPSGP*WNSPCSAGYSSVWF
Trigger: GAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp TTTGGTTTCACAAGAACTACAGACACTCCAGAGTTGGAAGGGCCCTaGGGAGCCGCTGGCACAGCCCCCACCGCAATCTGGGCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: FGFTRTTDTPELEGP*GAAGTAPTAIWAGL
Trigger: CAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTGTAGTTCTTGTGAAACCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp AACCAGGAAAGCCATGGAGGAGGCAGCTCAGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAG +
Preference number: 1 (lower is better)
Translates to: NQESHGGGSSGWLPM*REWHTGSADSKCTE
Trigger: CTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCCTCCATGGCTTTCCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CTAGAAATAATCTACGCAATCGGTGACCCCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGAGCACCAGCCCTGGAGCTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: LEIIYAIGDPTVTQP*LSGSARAPALELQG
Trigger: GCCCTGCAGCTCCAGGGCTGGTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATTATTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp ACTCCTGGTGACCTTCTGGCCCAAATGGGCAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCCAAGGCCAGGTGTGGACTTGTGGTG +
Preference number: 1 (lower is better)
Translates to: TPGDLLAQMGKGNPR*RERAAAKARCGLVV
Trigger: CACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp GCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCACC +
Preference number: 1 (lower is better)
Translates to: AALDSWPSGPCWNSP*SAGYSSVWFRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp GAGGAACAAACCAGGAAAGCCATGGAGGAGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGT +
Preference number: 1 (lower is better)
Translates to: EEQTRKAMEEAAQAG*PCAENGTLAPQTAS
Trigger: ACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCCTCCATGGCTTTCCTGGTTTGTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CCAACCTGCACAGCACATCCAGCAGGACAACTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGCAGAAGATGCCCACAGCGTTCCAGA +
Preference number: 1 (lower is better)
Translates to: PTCTAHPAGQLWLSR*QMEPMGRRCPQRSR
Trigger: TCTGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGATGTGCTGTGCAGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp AATCTGGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTaGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGA +
Preference number: 1 (lower is better)
Translates to: NLGRAALDSWPSGPC*NSPCSAGYSSVWFR
Trigger: TCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp GTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGA +
Preference number: 1 (lower is better)
Translates to: VSPLSRLNFHSPPGS*GAVSRGWEPRKEPG
Trigger: TCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GCACAGCACATCCAGCAGGACAACTGTGGCTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGATGCCCACAGCGTTCCAGATGTGTGT +
Preference number: 1 (lower is better)
Translates to: AQHIQQDNCGSAGAK*SPWAEDAHSVPDVC
Trigger: ACACACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGATGTGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp CGACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTTCAGACACGCTACCACCCAGTTTTC +
Preference number: 1 (lower is better)
Translates to: RQLAIWPVLEQSMLR*LFFRLVQTRYHPVF
Trigger: GAAAACTGGGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp GCCTCTTGGCGCAGCAGCCCTTTCAATCATTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCCAAGGTAGGGATGGGGCTGTCCCCA +
Preference number: 1 (lower is better)
Translates to: ASWRSSPFNHSPNAY*CFSADSKVGMGLSP
Trigger: TGGGGACAGCCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCTGCGCCAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp ATCCAGCAGGACAACTGTGGCTCAGCAGGTGCCAAATGGAGCCCATaGGCAGAAGATGCCCACAGCGTTCCAGATGTGTGTGGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: IQQDNCGSAGAKWSP*AEDAHSVPDVCGLR
Trigger: TCTCAGACCACACACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp CCTCACTTGGCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACTGGTCTCACCCTAGACATGTCTGGC +
Preference number: 1 (lower is better)
Translates to: PHLADHNVPQLISVP*RVVLSTGLTLDMSG
Trigger: GCCAGACATGTCTAGGGTGAGACCAGTGCTCAGCACCACCCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp TTGAGAAGAGTCCTGAATGCCGCCTGTTGCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCTGCTGAGGATGGAGATGGGGCCGAA +
Preference number: 1 (lower is better)
Translates to: LRRVLNAACCLPKSP*GQSVSSAEDGDGAE
Trigger: TTCGGCCCCATCTCCATCCTCAGCAGATGACACTGATTGGCCTCACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CTTCCTGCCTCCAATTCATTTCTTGCTGATGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAGTCCCTCAGCCCAAGCACTCTGTGG +
Preference number: 1 (lower is better)
Translates to: LPASNSFLADDPAAT*TGSNSQSLSPSTLW
Trigger: CCACAGAGTGCTTGGGCTGAGGGACTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGGCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp AGGAAATCCACGCTGCAGAGAGCGGGCAGCAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATGTGTCCTGTTTCCAGACAGACATTT +
Preference number: 1 (lower is better)
Translates to: RKSTLQRAGSSQGQV*TCGGKMCPVSRQTF
Trigger: AAATGTCTGTCTGGAAACAGGACACATCTTGCCACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TTGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCTGCAGAGAGCGGGCAGCAGCCAAGG +
Preference number: 1 (lower is better)
Translates to: LTLSSDELLVTFWPK*AKEIHAAESGQQPR
Trigger: CCTTGGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TGGCTTTCTTTTGTGAGCGGAGCCTTTGTAGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: WLSFVSGAFVASSGS*KATLRGLKASWRSS
Trigger: GCTGCTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCTACAAAGGCTCCGCTCACAAAAGAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp GCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTaGGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGG +
Preference number: 1 (lower is better)
Translates to: AGAGPIKLTPTDFWV*EDARGSKMESRRGR
Trigger: CCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp CTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTaGACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTT +
Preference number: 1 (lower is better)
Translates to: LPMCREWHTGSADSK*TERLWGVIIQAWTL
Trigger: AAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 90 bp TCTTGGCGCAGCAGCCCTTTCAATCATTCGCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAGGTAGGGATGGGGCTGTCCCCAACA +
Preference number: 1 (lower is better)
Translates to: SWRSSPFNHSPNAYC*FSADSKVGMGLSPT
Trigger: TGTTGGGGACAGCCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCTGCGCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCTTGGACTCTTCCTGCCTCCAATTCA +
Preference number: 1 (lower is better)
Translates to: EWHTGSADSKCTERL*GVIIQAWTLPASNS
Trigger: TGAATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp CGTGAAACCCAGCCCTCAAGAAACTCTGGGGACATCTGGCATCTTTaGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTGGCCGACCAT +
Preference number: 1 (lower is better)
Translates to: RETQPSRNSGDIWHL*SSLVPAIIPHLADH
Trigger: ATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTGGGTTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GATGTCAAGTTGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAAATCCACGCTGCAGAGAGCGGGCAG +
Preference number: 1 (lower is better)
Translates to: DVKLTLSSDELLVTF*PKWAKEIHAAESGQ
Trigger: CTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAACTTGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TCCTTGGCGGGTGGTGCTGAGCACTGGTCTCACCCTAGACATGTCTaGCTGATGGCCAGTCACATGTTGCATCTCTTTTTAGTTTCTAGG +
Preference number: 1 (lower is better)
Translates to: SLAGGAEHWSHPRHV*LMASHMLHLFLVSR
Trigger: CCTAGAAACTAAAAAGAGATGCAACATGTGACTGGCCATCAGCCAGACATGTCTAGGGTGAGACCAGTGCTCAGCACCACCCGCCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp TCTGGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTaGCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTGGCGGG +
Preference number: 1 (lower is better)
Translates to: SGIFGLLWSLQSFLT*PTIMSHNSSVFLGG
Trigger: CCCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp AGCCCTCAAGAAACTCTGGGGACATCTGGCATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTCACTTGGCCGACCATAATGTCCCAC +
Preference number: 1 (lower is better)
Translates to: SPQETLGTSGIFGLL*SLQSFLTWPTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GGCCCGTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACCCAGTTTTCTGCAAACAGCTTAAAA +
Preference number: 1 (lower is better)
Translates to: GPCWNSPCSAGYSSV*FRHATTQFSANSLK
Trigger: TTTTAAGCTGTTTGCAGAAAACTGGGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 90 bp GACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAATTCATTTCTTGCTGATGACCCGGCA +
Preference number: 1 (lower is better)
Translates to: DSKCTERLWGVIIQA*TLPASNSFLADDPA
Trigger: TGCCGGGTCATCAGCAAGAAATGAATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 90 bp AAGCAAAGACGTGAAACCCAGCCCTCAAGAAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTG +
Preference number: 1 (lower is better)
Translates to: KQRRETQPSRNSGDI*HLWSSLVPAIIPHL
Trigger: CAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTGGGTTTCACGTCTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp TTAGCTCACGATGGAAAAGGTCACCTGCACCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGGAAAGAGGCAGGTAGTCAACGTTTT +
Preference number: 1 (lower is better)
Translates to: LAHDGKGHLHHHLWK*ARRCPRKEAGSQRF
Trigger: AAAACGTTGACTACCTGCCTCTTTCCTCGGGCATCGACGTGCTCATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCATCGTGAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp TACCACCATGCCAGCTCCTCTTTGCCTTTTATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCC +
Preference number: 1 (lower is better)
Translates to: YHHASSSLPFMSLQI*TVEVSPLSRLNFHS
Trigger: GGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGTTCATATTTGCAGTGACATAAAAGGCAAAGAGGAGCTGGCATGGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 90 bp ACAGTTTCCAGGACAGATGGCCATCCGGTCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAA +
Preference number: 1 (lower is better)
Translates to: TVSRTDGHPVILFSF*RAHYRTIPAVLNLQ
Trigger: TTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAATGACCGGATGGCCATCTGTCCTGGAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 90 bp ATTTTAGACTCTGGTCAGTGCACAGAAGGTGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAGCAGGGCCAATTAAACTTACTCCAA +
Preference number: 1 (lower is better)
Translates to: ILDSGQCTEGGDLNL*FKGQLEQGQLNLLQ
Trigger: TTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR TCA 90 bp ATACTAGTTGGCCAACATGCTCAGAGAAAACAGACTATCCACAACTaGGCCTCATTCTCTCTCAGATCAATCCATGTGCTGGAAACTATT +
Preference number: 1 (lower is better)
Translates to: ILVGQHAQRKQTIHN*ASFSLRSIHVLETI
Trigger: AATAGTTTCCAGCACATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: CCLPPAASSLAEHIGQSADPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: AASSLAEHIGQSADSRRWDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACACCCTAGACATGTCTaGCTGATGGCCAGTCACATG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARHPRHV*LMASHM
Trigger: CATGTGACTGGCCATCAGCCAGACATGTCTAGGGTG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSAREKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCACTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACGCCCAGCCAGGACTTaGAATTCTTACAGTAAGATG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARRPART*NSYSKM
Trigger: CATCTTACTGTAAGAATTTCAAGTCCTGGCTGGGCG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTGGTATAAGCATCACTaGGTGTACACTGGGCAGCCG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQWYKHH*VYTGQP
Trigger: CGGCTGCCCAGTGTACACTCAGTGATGCTTATACCA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAGGCTGGAGTGCAGTaGTGGAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQAGVQ*WNLGSL
Trigger: CAGTGAGCCGAGATTCCACCACTGCACTCCAGCCTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp TTGGCTTTCTTTTGTGAGCGGAGCCTTTGTAGCCTCGTCAGGAAGTaGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LAFFCERSLCSLVRK*ESHVKGTEGLLAQQ
Trigger: CTGCTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCTACAAAGGCTCCGCTCACAAAAGAAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGACCCATGTATTAGGCTaGCTGGAAAACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQTHVLG*LENCGA
Trigger: AGCCCCACAGTTTTCCAGTCAGCCTAATACATGGGT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTC +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARIFGLL*SLQSFL
Trigger: GAGGAATGATTGCAGGGACCAGAGAAGACCAAAGAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CAGAAGGTTTGCAAACTGAGCTTCAGTGTGGAATACTGCCCAGGTTaGCAGATCAGCCTCTGGGCAGCACGAGCAGGGTGGAAGAGCATT +
Preference number: 2 (lower is better)
Translates to: QKVCKLSFSVEYCPG*QISLWAARAGWKSI
Trigger: AATGCTCTTCCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQDPAAT*TGSNSQ
Trigger: CTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAISCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: GCPCAENGTLAPQTASAQVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: AASSLAEHIGQSADSRRWVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQNSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCTAAGGAAGTTGGTTTaGTCTACTGACCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLRKLV*STDLGA
Trigger: GGCTCCCAGGTCAGTAGACCAAACCAACTTCCTTAG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAACCAGTAAAAGCATaGGCTACCCTGGCTAGTTTT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQPVKA*ATLASF
Trigger: AAAACTAGCCAGGGTAGCTCATGCTTTTACTGGTTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAATTCCAGCTGTGCTaGACCTTCAAACGCACTTGT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQFQLC*TFKRTC
Trigger: ACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCCATGGGCAGAAGATaGCCACAGCGTTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPMGRR*PQRSRC
Trigger: ACATCTGGAACGCTGTGGGCATCTTCTGCCCATGGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCCTTCTGTACCACCATaGCAGCTCCTCTTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATPSVPP*QLLFAF
Trigger: AAAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGTCTTCTCTGGTCCCTaGAATCATTCCTCACTTGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATVFSGP*NHSSLG
Trigger: GCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGAC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGACACCAGCGCACATaGCCTATTTGGTATAAGCAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRHQRT*PIWYKH
Trigger: ATGCTTATACCAAATAGGGCATGTGCGCTGGTGTCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMIGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAATCATTCCTCACTTaGCCGACCATAATGTCCCAC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQSFLT*PTIMSH
Trigger: GTGGGACATTATGGTCGGCCAAGTGAGGAATGATTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp ATCTGGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTaGGCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: IWHLWSSLVPAIIPH*ADHNVPQLISVPWR
Trigger: CCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQSAGAK*SPWAED
Trigger: ATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSLTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTTTCTGTCTGGAAGCTaGAGATGTCAAGTTGACACT +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRFLSGS*RCQVDT
Trigger: AGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 2 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCACACAGCAGAAGGTTTaGAAACTGAGCTTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATTQQKV*KLSFSV
Trigger: CACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: LVVYTEKGPAKSASVERGVIIQA*TLPASN
Trigger: ATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAAC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGTGCAAATAGCCAAGTaGTGGCAGAAGTTCTGCATT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSVQIAK*WQKFCI
Trigger: AATGCAGAACTTCTGCCACCACTTGGCTATTTGCAC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGCTGTTGTTTCACTaGTCACACCTTACTTTAGGC +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLLLFH*SHLTLG
Trigger: GCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CACTGGTCTCACCCTAGACATGTCTGGCTGATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCTAGGTTTCTGAAGAGCCTGCGCTTG +
Preference number: 2 (lower is better)
Translates to: HWSHPRHVWLMASHM*HLFLVSRFLKSLRL
Trigger: CAAGCGCAGGCTCTTCAGAAACCTAGAAACTAAAAAGAGATGCAACATGTGACTGGCCATCAGCCAGACATGTCTAGGGTGAGACCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCA +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHSKGT*FSAVVS
Trigger: TGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGAAGGTTTGCAAACTaGGCTTCAGTGTGGAATACT +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRRFAN*ASVWNT
Trigger: AGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTCAGAAAGGGATTCTTaGAATGTGAATAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRSERDS*NVNRRS
Trigger: GGACCTTCTATTCACATTTCAAGAATCCCTTTCTGA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPTSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 2 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFITVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGAGACAGGGAAGAATGTaGGAGGCAGTTCCTAACATT +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERRQGRM*EAVPNI
Trigger: AATGTTAGGAACTGCCTCCCACATTCTTCCCTGTCT...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTTTTATTTTAGACTCTaGTCAGTGCACAGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSFYFRL*SVHRRW
Trigger: CCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGTTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 2 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQLFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFITTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGCCCTCAAGAAACTCTaGGGACATCTGGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIALKKL*GHLASL
Trigger: CAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCTTTTATTGCAACAGTaGCTTCTTTCCTGTGGACTC +
Preference number: 2 (lower is better)
Translates to: QLEQGQLNLLQLISGCERLLLQQ*LLSCGL
Trigger: GAGTCCACAGGAAAGAAGTCACTGTTGCAATAAAAG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACA +
Preference number: 2 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATILFSF*RAHYRT
Trigger: TGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAAT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp GACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: DCANSQVVAEVLHFQEMICTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...GATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATTTGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAAGCATGAGCTACCCTaGCTAGTTTTATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIKHELP*LVLWPL
Trigger: CAGTGGCCATAAAACTAGCCAGGGTAGCTCATGCTT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAINSGDI*HLWSSL
Trigger: CAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp GTGGGGCTTATGTGTTCCACAGCAAAGGAACATGATTCTCTGCTGTaGTTTCACTGGTCACACCTTACTTTAGGCAATGGAAATCTAGGC +
Preference number: 2 (lower is better)
Translates to: VGLMCSTAKEHDSLL*FHWSHLTLGNGNLG
Trigger: GCCTAGATTTCCATTGCCTAAAGTAAGGTGTGACCAGTGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTGGAACACATAAGCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp ATGTTGCATCTCTTTTTAGTTTCTAGGTTTCTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACCACCATGCCAGCTCCTCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: MLHLFLVSRFLKSLR*TDTFCTTMPAPLCL
Trigger: AAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAGAAACCTAGAAACTAAAAAGAGATGCAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CAAAGTAAAGCATGGGTTTTCTGTCTGGAAGCTGAAGATGTCAAGTaGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: QSKAWVFCLEAEDVK*TLSSDELLVTFWPK
Trigger: TTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAACTTGACATCTTCAGCTTCCAGACAGAAAACCCATGCTTTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp TACAGTTTCCAGGACAGATGGCCATCCGGTCATTCTGTTTTCATTTaGAAGAGCTCACTACCGTACAATTCCAGCTGTGCTGAACCTTCA +
Preference number: 2 (lower is better)
Translates to: YSFQDRWPSGHSVFI*KSSLPYNSSCAEPS
Trigger: TGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAATGACCGGATGGCCATCTGTCCTGGAAACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTAGACATGTCTGGCTaGTGGCCAGTCACATGTTGC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILDMSG*WPVTCC
Trigger: GCAACATGTGACTGGCCATCAGCCAGACATGTCTAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGG +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIHHLWK*ARRCPR
Trigger: CCTCGGGCATCGACGTGCTCATTTCCAAAGATGATG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTTTGCTACTACGGGTaGTTTTATTGCAACAGTGAC +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQFCYYG*FYCNSD
Trigger: GTCACTGTTGCAATAAAAGCACCCGTAGTAGCAAAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCTGGGTGTGAGAGGATaGCAGAGGCTCAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFILGVRG*QRLKDG
Trigger: TCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIGDLNL*FKGQLE
Trigger: CTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCC...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFICWNSP*SAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFCTERL*GVIIQA
Trigger: AGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACAAATAGCCAAGTGGTaGCAGAAGTTCTGCATTTCC +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIQIAKW*QKFCIS
Trigger: GGAAATGCAGAACTTCTGCCACCACTTGGCTATTTG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGAAGGCTACCTGTGTaGATCCCTTTTCCTTTATGG +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRRLPV*IPFPLW
Trigger: CCATAAAGGAAAAGGGATCCACACAGGTAGCCTTCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp CACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTACCCAGAATGATGTCTATACCCTTT +
Preference number: 2 (lower is better)
Translates to: HYRTIPAVLNLQTHL*RYPLELPRMMSIPF
Trigger: AAAGGGTATAGACATCATTCTGGGTAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR TCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIMSLQI*TVEVSP
Trigger: AGGACTGACCTCTACAGTTCATATTTGCAGTGACAT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILDSGQ*TEGGDL
Trigger: TAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGYSSV*FRHATT
Trigger: GGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp TTTATTTTAGACTCTGGTCAGTGCACAGAAGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTGGAGCAGGGCCAATTAAACTTACTC +
Preference number: 2 (lower is better)
Translates to: FILDSGQCTEGGDLN*CFKGQLEQGQLNLL
Trigger: GAGTAAGTTTAATTGGCCCTGCTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CCA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATATTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTTATTTTGTTGGTTTTaGCTCCTTATTCCAACCAGT +
Preference number: 2 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLFCWF*LLIPTS
Trigger: ACTGGTTGGAATAAGGAGCCAAAACCAACAAAATAA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTCTCTTAGCTCACGATaGAAAAGGTCACCTGCACCA +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFISLSSR*KRSPAP
Trigger: TGGTGCAGGTGACCTTTTCCATCGTGAGCTAAGAGA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CAA 90 bp GGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAATTaGACGATACTAGTTGGCCAACATGCTCAGAGAAAACAGACTATC +
Preference number: 2 (lower is better)
Translates to: GGRSSAFPRDDPLNN*TILVGQHAQRKQTI
Trigger: GATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATACTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSILSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGACACCAGCGCACATaGCCTATTTGGTATAAGCAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRHQRT*PIWYKH
Trigger: ATGCTTATACCAAATAGGGCATGTGCGCTGGTGTCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATAACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSITSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTTTCTAACCCAGCACTaGCCTAGAAATAATCTACGC +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIFLTQH*PRNNLR
Trigger: GCGTAGATTATTTCTAGGGCAGTGCTGGGTTAGAAA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CCA 90 bp AATAGCCAAGTGGTGGCAGAAGTTCTGCATTTCCAAGAGATGATCCACTCAATATTTGACGATACTAGTTaGCCAACATGCTCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: NSQVVAEVLHFQEMIHSIFDDTS*PTCSEK
Trigger: TTTCTCTGAGCATGTTGGCCAACTAGTATCGTCAAA...TATTGAGTGGATCATCTCTTGGAAATGCAGAACTTCTGCCACCACTTGGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATAGATCTTATCAAGTCTaGACAGCAGGGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHRSYQV*TAGLRR
Trigger: TCTTCTCAACCCTGCTGTTCAGACTTGATAAGATCT...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR TCA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCTTTCCTGTGGACTCTaGGATCTTATCAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHLSCGL*DLIKSE
Trigger: TTCAGACTTGATAAGATCTCAGAGTCCACAGGAAAG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCACTAGTTGGCCAACATaGTCAGAGAAAACAGACTAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFITSWPT*SEKTDY
Trigger: ATAGTCTGTTTTCTCTGAGCATGTTGGCCAACTAGT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCATGGAAAAGGTCACCTaGACCATCATCTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIMEKVT*TIIFGN
Trigger: ATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCAT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR GCA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGAAACAGAAGTTGTGTaGCTGATGATAAATCAACAT +
Preference number: 2 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIETEVV*LMINQH
Trigger: ATGTTGATTTATCATCAGGCACACAACTTCTGTTTC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp CCCTGCGGAGCCGCTGGCACAGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCC +
Preference number: 3 (lower is better)
Translates to: PCGAAGTAPTAI*AGLLSTAGHLA
Trigger: GGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp ACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCACCAGCCCTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: TQSVTPRSPNRA*ADLLEHQPWSC
Trigger: GCAGCTCCAGGGCTGGTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ACGCAAGGAACCTGGATTCGCTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGTGCTCCTCCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: TQGTWIRSCASS*LPRPNGAPPPD
Trigger: GTCAGGAGGAGGAGCACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp AGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCCCGCCCCAATGGTGCT +
Preference number: 3 (lower is better)
Translates to: RLGTTQGTWIRS*ASSCLPRPNGA
Trigger: AGCACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp GGCAGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCCGCTGGCTATTCTTCC +
Preference number: 3 (lower is better)
Translates to: GRAALDSWPSGP*WNSPCSAGYSS
Trigger: GGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCTAGCTGCCTACCCCGC +
Preference number: 3 (lower is better)
Translates to: CCQQRLGTTQGT*IRSCASSCLPR
Trigger: GCGGGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ATCTACGCAATCGGTGACCCCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGAGCACCAGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: IYAIGDPTVTQP*LSGSARAPALE
Trigger: CTCCAGGGCTGGTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ACAAGAACTACAGACACTCCAGAGTTGGAAGGGCCCTaGGGAGCCGCTGGCACAGCCCCCACCGCAATCTGG +
Preference number: 3 (lower is better)
Translates to: TRTTDTPELEGP*GAAGTAPTAIW
Trigger: CCAGATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTGTAGTTCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GGAGGCAGCTCAGGCTGGCTGCCCATGTGCAGAGAATaGCACACTGGCTCCGCAGACAGCAAGTGCACAGAG +
Preference number: 3 (lower is better)
Translates to: GGSSGWLPMCRE*HTGSADSKCTE
Trigger: CTCTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATACCGTGAGCCGAGATaGCGCGATTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARYREPR*RDCTPA
Trigger: GGCTGGAGTGCAATCGCGCAATCTCGGCTCACGGTA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp AGGGCTGCTCTCGACAGCTGGCCATCTGGCCCGTGCTaGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTT +
Preference number: 3 (lower is better)
Translates to: RAALDSWPSGPC*NSPCSAGYSSV
Trigger: AACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp ACGCTGCAGAGAGCGGGCAGCAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATGTGTCCTGTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: TLQRAGSSQGQV*TCGGKMCPVSR
Trigger: TCTGGAAACAGGACACATCTTGCCACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTCTGCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGCCGAGATTGCGCGATaGCACTCCAGCCTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSAEIAR*HSSLGD
Trigger: GTCTCCCAGGCTGGAGTGCAATCGCGCAATCTCGGC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GAGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTACCAACCTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: EVQEGFSDETRP*QWGQVLPTCTA
Trigger: TGCTGTGCAGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR TCA 72 bp ACCCAGCACTGCCCTAGAAATAATCTACGCAATCGGTaGCCCCACGGTCACCCAACCGTGCCTGAGCGGATC +
Preference number: 3 (lower is better)
Translates to: TQHCPRNNLRNR*PHGHPTVPERI
Trigger: GATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATTATTTCTAGGGCAGTGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ACAGCACATCCAGCAGGACAACTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGCAGAAGATGCCCACAG +
Preference number: 3 (lower is better)
Translates to: TAHPAGQLWLSR*QMEPMGRRCPQ
Trigger: CTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGATGTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 72 bp CCCCAGTGTGGAGTGCCCCCACCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAACAACTTCTTGAGTCAC +
Preference number: 3 (lower is better)
Translates to: PQCGVPPPPEVD*LGLGLNNFLSH
Trigger: GTGACTCAAGAAGTTGTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGGTGGGGGCACTCCACACTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp GACAGCTGGCCATCTGGCCCGTGCTGGAACAGTCCATaGTCCGCTGGCTATTCTTCCGTTTGGTTCAGACAC +
Preference number: 3 (lower is better)
Translates to: DSWPSGPCWNSP*SAGYSSVWFRH
Trigger: GTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCAGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp ATCCAGCAGGACAACTGTGGCTCAGCAGGTGCCAAATaGAGCCCATGGGCAGAAGATGCCCACAGCGTTCCA +
Preference number: 3 (lower is better)
Translates to: IQQDNCGSAGAK*SPWAEDAHSVP
Trigger: TGGAACGCTGTGGGCATCTTCTGCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp GCCATCTGGCCCGTGCTGGAACAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTTCAGACACGCTACCAC +
Preference number: 3 (lower is better)
Translates to: AIWPVLEQSMLR*LFFRLVQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCACGGGCCAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGCTTAAACAACTTCTaGAGTCACCTTCCCCACTGG +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGLNNF*SHLPHW
Trigger: CCAGTGGGGAAGGTGACTCAAGAAGTTGTTTAAGCC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp CACAGCAACCACAGCCCACAAGAGCAGGCCAGGCTCTaGACACCAAACCTAAGCCTTAGCCACAGAAATGGG +
Preference number: 3 (lower is better)
Translates to: HSNHSPQEQARL*TPNLSLSHRNG
Trigger: CCCATTTCTGTGGCTAAGGCTTAGGTTTGGTGTGCAGAGCCTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GCCGACCATAATGTCCCACAACTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACTGGTCTCACCCTAGAC +
Preference number: 3 (lower is better)
Translates to: ADHNVPQLISVP*RVVLSTGLTLD
Trigger: GTCTAGGGTGAGACCAGTGCTCAGCACCACCCGCCAAGGAACACTGATGAGTTGTGGGACATTATGGTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GAGAGCGGGCAGCAGCCAAGGCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGTTTCCAGACAGACATT +
Preference number: 3 (lower is better)
Translates to: ESGQQPRPGVDL*WQDVSCFQTDI
Trigger: AATGTCTGTCTGGAAACAGGACACATCTTGCCACCACAAGTCCACACCTGGCCTTGGCTGCTGCCCGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp AGCAGTGATGAACTCCTGGTGACCTTCTGGCCCAAATaGGCAAAGGAAATCCACGCTGCAGAGAGCGGGCAG +
Preference number: 3 (lower is better)
Translates to: SSDELLVTFWPK*AKEIHAAESGQ
Trigger: CTGCCCGCTCTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 3 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCAGGCCAGGTGTGGACTaGTGGTGGCAAGATGTGTCC +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATRPGVD*WWQDVS
Trigger: GGACACATCTTGCCACCACAAGTCCACACCTGGCCT...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GTCCTGAATGCCGCCTGTTGCTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCTGCTGAGGATGGAGAT +
Preference number: 3 (lower is better)
Translates to: VLNAACCLPKSP*GQSVSSAEDGD
Trigger: ATCTCCATCCTCAGCAGATGACACTGATTGGCCTCACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp ACTGGCTCCGCAGACAGCAAGTGCACAGAGAGGCTGTaGGGTGTTATTATTCAGGCTTGGACTCTTCCTGCC +
Preference number: 3 (lower is better)
Translates to: TGSADSKCTERL*GVIIQAWTLPA
Trigger: GGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: GCPCAENGTLAPQTASAQCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCCTGCACCATCATCTTaGGAAATGAGCACGTCGATG +
Preference number: 3 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQPAPSS*EMSTSM
Trigger: CATCGACGTGCTCATTTCCAAAGATGATGGTGCAGG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp TCCAATTCATTTCTTGCTGATGACCCGGCAGCTACATaGACGGGTTCCAACAGTCAGTCCCTCAGCCCAAGC +
Preference number: 3 (lower is better)
Translates to: SNSFLADDPAAT*TGSNSQSLSPS
Trigger: GCTTGGGCTGAGGGACTGACTGTTGGAACCCGTGCATGTAGCTGCCGGGTCATCAGCAAGAAATGAATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 72 bp CGCAGCAGCCCTTTCAATCATTCGCCTAATGCTTATTaGTGCTTCTCTGCCGACTCCAAGGTAGGGATGGGG +
Preference number: 3 (lower is better)
Translates to: RSSPFNHSPNAY*CFSADSKVGMG
Trigger: CCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TTTGTGAGCGGAGCCTTTGTAGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: FVSGAFVASSGS*KATLRGLKASW
Trigger: CCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGCTACAAAGGCTCCGCTCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAGGCAGGAGAATTGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSRQENC*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCCT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp CAGAAGGTTTGCAAACTGAGCTTCAGTGTGGAATACTaGCCAGGTTTGCAGATCAGCCTCTGGGCAGCACGA +
Preference number: 3 (lower is better)
Translates to: QKVCKLSFSVEY*PGLQISLWAAR
Trigger: TCGTGCTGCCCAGAGGCTGATCTGCAAACCTGGGCAGTATTCCACACTGAAGCTCAGTTTGCAAACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp AGCAGCCCTTTCAATCATTCGCCTAATGCTTATTGCTaGTTCTCTGCCGACTCCAAGGTAGGGATGGGGCTG +
Preference number: 3 (lower is better)
Translates to: SSPFNHSPNAYC*FSADSKVGMGL
Trigger: CAGCCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCGAATGATTGAAAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 3 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GATGGAAAAGGTCACCTGCACCATCATCTTTGGAAATaGGCACGTCGATGCCCGAGGAAAGAGGCAGGTAGT +
Preference number: 3 (lower is better)
Translates to: DGKGHLHHHLWK*ARRCPRKEAGS
Trigger: ACTACCTGCCTCTTTCCTCGGGCATCGACGTGCTCATTTCCAAAGATGATGGTGCAGGTGACCTTTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GGTGGTGCTGAGCACTGGTCTCACCCTAGACATGTCTaGCTGATGGCCAGTCACATGTTGCATCTCTTTTTA +
Preference number: 3 (lower is better)
Translates to: GGAEHWSHPRHV*LMASHMLHLFL
Trigger: TAAAAAGAGATGCAACATGTGACTGGCCATCAGCCAGACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp GAAACTCTGGGGACATCTGGCATCTTTGGTCTTCTCTaGTCCCTGCAATCATTCCTCACTTGGCCGACCATA +
Preference number: 3 (lower is better)
Translates to: ETLGTSGIFGLL*SLQSFLTWPTI
Trigger: TATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp CAGCCCTCAAGAAACTCTGGGGACATCTGGCATCTTTaGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTG +
Preference number: 3 (lower is better)
Translates to: QPSRNSGDIWHL*SSLVPAIIPHL
Trigger: CAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp CGTGAAACCCAGCCCTCAAGAAACTCTGGGGACATCTaGCATCTTTGGTCTTCTCTGGTCCCTGCAATCATT +
Preference number: 3 (lower is better)
Translates to: RETQPSRNSGDI*HLWSSLVPAII
Trigger: AATGATTGCAGGGACCAGAGAAGACCAAAGATGCCAGATGTCCCCAGAGTTTCTTGAGGGCTGGGTTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TTGACACTAAGCAGTGATGAACTCCTGGTGACCTTCTaGCCCAAATGGGCAAAGGAAATCCACGCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: LTLSSDELLVTF*PKWAKEIHAAE
Trigger: CTCTGCAGCGTGGATTTCCTTTGCCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCACTGCTTAGTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTaGTTCAGACACGCTACCACCCAGTTTTCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSV*FRHATTQFSAN
Trigger: GTTTGCAGAAAACTGGGTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCCATGATTCTCTGCTGTaGTTTCACTGGTCACACCTT +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSHDSLL*FHWSHL
Trigger: AAGGTGTGACCAGTGAAACAACAGCAGAGAATCATG...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSNTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGATGGCCAGTCACATGTaGCATCTCTTTTTAGTTTCT +
Preference number: 3 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQMASHM*HLFLVS
Trigger: AGAAACTAAAAAGAGATGCAACATGTGACTGGCCAT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTaGGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: GPIKLTPTDFWV*EDARGSKMESR
Trigger: CCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp GGTTTGCAGATCAGCCTCTGGGCAGCACGAGCAGGGTaGAAGAGCATTACAAAGATTCAGAAAACGAAACTG +
Preference number: 3 (lower is better)
Translates to: GLQISLWAARAG*KSITKIQKTKL
Trigger: CAGTTTCGTTTTCTGAATCTTTGTAATGCTCTTCCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCGCCTGGCTGAGCACATaGGACAGTCTGCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFAWLST*DSLLTQ
Trigger: TTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGC...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCAGGCAGGAGACTCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIRQETR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCCT...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACTGAAGAGCCTGCGCTaGACTGATACCTTCTGTACC +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAILKSLR*TDTFCT
Trigger: GGTACAGAAGGTATCAGTCAAGCGCAGGCTCTTCAG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTTCAAACGCACTTGTaGCGATATCCTCTAGAACTA +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLQTHL*RYPLEL
Trigger: TAGTTCTAGAGGATATCGCAACAAGTGCGTTTGAAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGGACTGAAGGCCTCTaGGCGCAGCAGCCCTTTCAA +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGTEGL*AQQPFQ
Trigger: TTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCCC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp TCTGGTCAGTGCACAGAAGGTGGAGATTTAAACTTGTaGTTCAAAGGCCAGCTGGAGCAGGGCCAATTAAAC +
Preference number: 3 (lower is better)
Translates to: SGQCTEGGDLNL*FKGQLEQGQLN
Trigger: GTTTAATTGGCCCTGCTCCAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR CCA 72 bp TTTGGTCTTCTCTGGTCCCTGCAATCATTCCTCACTTaGCCGACCATAATGTCCCACAACTCATCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: FGLLWSLQSFLT*PTIMSHNSSVF
Trigger: GAACACTGATGAGTTGTGGGACATTATGGTCGGCCAAGTGAGGAATGATTGCAGGGACCAGAGAAGACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATACCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAIPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp GCATTTCCAAGAGATGATCCACTCAATAATTTGACGATACTAGTTGGCCAACATCCTGAATGCCGCCTGTaGCTTACCCAAGTCCCCGTG +
Preference number: 3 (lower is better)
Translates to: AFPRDDPLNNLTILVGQHPECRL*LTQVPV
Trigger: CACGGGGACTTGGGTAAGCAACAGGCGGCATTCAGG...ATGTTGGCCAACTAGTATCGTCAAATTATTGAGTGGATCATCTCTTGGAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGATCCACTCAATAATTaGACGATACTAGTTGGCCAA +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSDPLNN*TILVGQ
Trigger: TTGGCCAACTAGTATCGTCAAATTATTGAGTGGATC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCCCTCCAATTCATTTCTaGCTGATGACCCGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFPPIHF*LMTRQL
Trigger: TAGCTGCCGGGTCATCAGCAAGAAATGAATTGGAGG...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCATTATTTTGTTGGTTTaGGCTCCTTATTCCAACCAG +
Preference number: 3 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSIILLV*APYSNQ
Trigger: CTGGTTGGAATAAGGAGCCAAAACCAACAAAATAAT...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp AGGACAGATGGCCATCCGGTCATTCTGTTTTCATTTTaGAGAGCTCACTACCGTACAATTCCAGCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: RTDGHPVILFSF*RAHYRTIPAVL
Trigger: CAGCACAGCTGGAATTGTACGGTAGTGAGCTCTTCAAAATGAAAACAGAATGACCGGATGGCCATCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR CCA 72 bp TGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTaGACTCTTCCTGCCTCCAATTCATTTCTTGCTGAT +
Preference number: 3 (lower is better)
Translates to: CTERLWGVIIQA*TLPASNSFLAD
Trigger: ATCAGCAAGAAATGAATTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp TCACTACCGTACAATTCCAGCTGTGCTGAACCTTCAAACGCACTTGTTGCGATAAACACAGCAGAAGGTTaGCAAACTGAGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: SLPYNSSCAEPSNALVAINTAEG*QTELQC
Trigger: ACACTGAAGCTCAGTTTGCAAACCTTCTGCTGTGTT...TATCGCAACAAGTGCGTTTGAAGGTTCAGCACAGCTGGAATTGTACGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp AACTGTGGGGCTTATGTGTTCCACAGCAAAGGAACATaGTTCTCTGCTGTTGTTTCACTGGTCACACCTTAC +
Preference number: 3 (lower is better)
Translates to: NCGAYVFHSKGT*FSAVVSLVTPY
Trigger: GTAAGGTGTGACCAGTGAAACAACAGCAGAGAATCATGTTCCTTTGCTGTGGAACACATAAGCCCCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR TCA 72 bp GCCAGCTCCTCTTTGCCTTTTATGTCACTGCAAATATaGACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAAT +
Preference number: 3 (lower is better)
Translates to: ASSSLPFMSLQI*TVEVSPLSRLN
Trigger: ATTCAGCCTGCTTAGAGGACTGACCTCTACAGTTCATATTTGCAGTGACATAAAAGGCAAAGAGGAGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAAGGACACAGAACAAGATGACTGTGCAAATAGCCAAGTGGTGGCAGAAGTTCTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: KRTQNKMTVQIAKWWQKFCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...GAACTTCTGCCACCACTTGGCTATTTGCACAGTCATCTTGTTCTGTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: QLEQGQLNLLQLISGCERQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGCAATCATTCCTCACTaGGCCGACCATAATGTCCCA +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIAIIPH*ADHNVP
Trigger: TGGGACATTATGGTCGGCCAAGTGAGGAATGATTGC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCTGGCTATTCTTCCGTTaGGTTCAGACACGCTACCAC +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIWLFFR*VQTRYH
Trigger: GTGGTAGCGTGTCTGAACCAAACGGAAGAATAGCCA...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AGAGAAAACAGACTATCCACAACTGAGCCTCATTCTCTCTCAGATCAATCCATGTGTTATTATTCAGGCTaGGACTCTTCCTGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: RENRLSTTEPHSLSDQSMCYYSG*DSSCLQ
Trigger: TTGGAGGCAGGAAGAGTCCAAGCCTGAATAATAACA...CATGGATTGATCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTGTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTCTGAAGAATTCTTaGAGGTCCAGGAGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGLKNS*RSRRAF
Trigger: AAAAGCCCTCCTGGACCTCAAAGAATTCTTCAGACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCGGTGGAGATTTAAACTaGTGCTTCAAAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIGGDLN*CFKGQL
Trigger: CAGCTGGCCTTTGAAGCACAAGTTTAAATCTCCACC...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR-3UTR CAA 90 bp AAAGCACAGAAAAACCAGATTCTAATGCATTCTGTGGGTGGTGTCACATTCATCCAAGGTTGGAAAATCTaGTCCAAAATCATCTGTGAT +
Preference number: 3 (lower is better)
Translates to: KAQKNQILMHSVGGVTFIQGWKI*SKIICD
Trigger: ATCACAGATGATTTTGGACAAGATTTTCCAACCTTG...GATGAATGTGACACCACCCACAGAATGCATTAGAATCTGGTTTTTCTGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
3UTR GCA 72 bp ATGGTACTGACAACTTTTATTTTAGACTCTGGTCAGTaGACAGAAGGTGGAGATTTAAACTTGTGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: MVLTTFILDSGQ*TEGGDLNLCFK
Trigger: TTTGAAGCACAAGTTTAAATCTCCACCTTCTGTGCACTGACCAGAGTCTAAAATAAAAGTTGTCAGTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
3UTR GCA 72 bp TTAGGCAATGGAAATCTAGGCATTTTAAAGGTGTCGTaGACTAGATTTCTTTGTAAGACTGAAAATGCTTGG +
Preference number: 3 (lower is better)
Translates to: LGNGNLGILKVS*TRFLCKTENAW
Trigger: CCAAGCATTTTCAGTCTTACAAAGAAATCTAGTGCACGACACCTTTAAAATGCCTAGATTTCCATTGCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSACSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAGACACCACCACCGCTaGTGTCGCCGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARRHHHR*CRRRRR
Trigger: GCGGCGGCGACGGCGACAGCAGCGGTGGTGGTGTCT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342704.11
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCCGCCCGAGCGCAGTaGAGCAGTTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVAARAQ*SSSRCS
Trigger: GCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSADETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTACTGGGATGGGGTCTaGTTGGCCGCCCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVYWDGV*LAARAQ
Trigger: CTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAAAGGAAATCCACGCTaGAGAGAGCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAKGNPR*RERAAA
Trigger: GGCTGCTGCCCGCTCTCTGCAGCGTGGATTTCCTTT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCACTGCATGTCTCGCTaGCTTTGCGGCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAHCMSR*LCGHSS
Trigger: GGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACCACGCAAGGAACCTaGATTCGCTCCTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATTQGT*IRSCAS
Trigger: AGAGGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTCCGTGCACCTCCATaGGCAACTCTGACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAFRAPP*ATLTSQ
Trigger: CTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTATCAGTGTCATCTGCTaGGGATGGAGATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAISVIC*GWRWGR
Trigger: TCGGCCCCATCTCCATCCTCAGCAGATGACACTGAT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCTCCCAGGGCTGTGCTaGCTGGAGACCAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWLPGLC*LETNSV
Trigger: GACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSADSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGGAGTGAAGGACACTaGCCTCGGTCCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSARSEGH*PRSSRI
Trigger: AATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGAATCTCTGTGGCGGTaGTGGGGCACCATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAESLWR*WGTIQG
Trigger: ACCCTGAATGGTGCCCCATCACCGCCACAGAGATTC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCAGGCAGGCCGCTCCCTaGCCGAGGGGCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSRQAAP*PRGLLH
Trigger: GTGGAGGAGGCCCCTCGGTCAGGGAGCGGCCTGCCT...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGCAGGAGACTCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGAGTCTCCTGCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGAGCCTGCGCTTGACTaGTACCTTCTGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAEPALD*YLLYHH
Trigger: ATGGTGGTACAGAAGGTATCAGTCAAGCGCAGGCTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGTGCTCCAGCCTGAGTaGCAGGGTGAGACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQVLQPE*QGETLS
Trigger: GGAAAGGGTCTCACCCTGTCACTCAGGCTGGAGCAC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCGTCGCCGCGAGATCTaGAGCCGCCGAGCTAACCAG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSRRREI*SRRANQ
Trigger: CTGGTTAGCTCGGCGGCTGCAGATCTCGCGGCGACG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342704.11
ENST00000375279.6
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSCSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCGCCGCCCGAGCGCAGTaGAGCAGTTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSAARAQ*SSSRCS
Trigger: GCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGC...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACAGCGCCGCAGAACTaGCATAGAGCGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATAPQN*HRAPCF
Trigger: AAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTAGTATCGCGCGATATTaGAGCCACTGCATGTCTCGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASIARY*SHCMSR
Trigger: GCGAGACATGCAGTGGCTGCAATATCGCGCGATACT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCGCTCCCAGTCCTTGTaGTGGCAGAAAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARSQSL*WQKEPQ
Trigger: CTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAAGTCCTACCAACCTaGACAGCACATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQVLPT*TAHPAG
Trigger: TCCTGCTGGATGTGCTGTGCAGGTTGGTAGGACTTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTGGCCATCTGGCCCGTaGTGGAACAGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWWPSGP*WNSPCS
Trigger: GGAGCATGGACTGTTCCAGCACGGGCCAGATGGCCA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGGGATGGGGTCTGCTTaGCCGCCCGAGCGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGGMGSA*PPERSA
Trigger: TGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGTGGAGGGGTAGGATaGAATTGGCCCCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGGGVG*NWPPGF
Trigger: GAATCCCGGGGGCCAATTCCATCCTACCCCTCCACC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTGAGGAACGCGATGTaGTTGCCGAGGTCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALRNAM*LPRSCR
Trigger: TCGACAAGACCTCGGCAACCACATCGCGTTCCTCAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGCTGACTCAAGGAGATaGGGAGGGGAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARADSRR*GGELVV
Trigger: GACCACCAGCTCCCCTCCCCATCTCCTTGAGTCAGC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATTGCAGATCAGCCTCTaGGCAGCACGAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLQISL*AARAGW
Trigger: CCACCCTGCTCGTGCTGCCCAGAGGCTGATCTGCAA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCACGGTGCAGGCAAGTaGGGACAAAAAGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAHGAGK*GQKGQA
Trigger: TGCTTGTCCTTTTTGTCCCCACTTGCCTGCACCGTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCCAGGTGTGGACTTGTaGTGGCAAGATGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAPGVDL*WQDVSC
Trigger: ACAGGACACATCTTGCCACCACAAGTCCACACCTGG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAASSGS*KATLRG
Trigger: TCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCAAAACCCCACCTGCTaGAAGGCGGCCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSQNPTC*KAAAPG
Trigger: CCCTGGAGCGGCCGCCTTCCAGCAGGTGGGGTTTTG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375279.6
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGAATCTCTGTGGCGGTaGTGGGGCACCATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWESLWR*WGTIQG
Trigger: ACCCTGAATGGTGCCCCATCACCGCCACAGAGATTC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGGCAGGACCATTGCTaGATCTCTGTGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCARQDHC*ISVAVM
Trigger: CATCACCGCCACAGAGATTCAGCAATGGTCCTGCCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGAGAAGGTGTTCGTGCTaGGCCAGGTACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGRRCSC*ARYWDG
Trigger: CCCATCCCAGTACCTGGCTCAGCACGAACACCTTCT...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGAGAAGGTGTTCGTGCTaGGCCAGGTACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQRRCSC*ARYWDG
Trigger: CCCATCCCAGTACCTGGCTCAGCACGAACACCTTCT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGAAGGTGTTCGTGCTaGGCCAGGTACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVRRCSC*ARYWDG
Trigger: CCCATCCCAGTACCTGGCTCAGCACGAACACCTTCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCTCCATGAGCAACTCTaGCGAGTCAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVLHEQL*RVSRRC
Trigger: GCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGATCACGATCTGATTCCTaGCAGCGCCGCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARSRSDS*QRRRTA
Trigger: GGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGA...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGAGCACTCTGTGGTGCTaGGCAGCCATCAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSTLWC*AAIRVS
Trigger: GCTTACCCTGATGGCTGCTCAGCACCACAGAGTGCT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCGCCTCCAGCCTGGCTaGGCACATTGGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQRLQPG*AHWTVC
Trigger: GCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTGAGGTCCGGGGTTTaGGACCAGCCTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLRSGV*DQPDQQ
Trigger: TTGTTGGTCAGGCTGGTCTCAAACCCCGGACCTCAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGGCAGAGGCCCTCGTaGCTTCTGTGTGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGQRPS*LLCETD
Trigger: GTCAGTTTCACACAGAAGTCACGAGGGCCTCTGCCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTCACCCAACCGTGCCTaGGCGGATCTGCTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSPNRA*ADLLEH
Trigger: GTGCTCTAGCAGATCCGCTCAGGCACGGTTGGGTGA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAATCTACGCAATCGGTaGCCCCACGGTCACCCAACC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVNLRNR*PHGHPT
Trigger: GGTTGGGTGACCGTGGGGTCACCGATTGCGTAGATT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTACTGGGATGGGGTCTaGTTGGCCGCCCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPYWDGV*LAARAQ
Trigger: CTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGCTGGCTGCCCATGTaGAGAGAATGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGWLPM*REWHTG
Trigger: GCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGAGAAGAGTCCTGAATaGCGCCTGTTGCTTACCCAA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAEKSPE*RLLLTQ
Trigger: TTGGGTAAGCAACAGGCGGCATTCAGGACTCTTCTC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACCTGGATTCGCTCCTaGGCCTCTAGCTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTWIRS*ASSCLP
Trigger: GGGTAGGCAGCTAGAGGCGCAGGAGCGAATCCAGGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCCTTCTGTACCACCATaGCAGCTCCTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAPSVPP*QLLFAF
Trigger: AAAGGCAAAGAGGAGCTGGCATGGTGGTACAGAAGG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGTCGAGCACCACAAGTaGCTGGCAATTGCTGATTTG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAVEHHK*LAIADL
Trigger: CAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGAC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAAGCCAGGTACTGGGATaGGGTCTGCTTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSQVLG*GLLGRP
Trigger: CGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGGGTAGGATGGAATTaGCCCCCGGGATTCATGAGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGVGWN*PPGFMR
Trigger: CCTCATGAATCCCGGGGGCCAATTCCATCCTACCCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGGTCTTGTCGAGGGCTaGGCTGGGCACGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRGLVEG*AGHAAV
Trigger: GACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACCCATGTGCAGAGAATaGCACACTGGCTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARPMCRE*HTGSAD
Trigger: GTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCGGAGGCAGCTCAGGCTaGCTGCCCATGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSGGSSG*LPMCRE
Trigger: TTCTCTGCACATGGGCAGCCAGCCTGAGCTGCCTCC...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCCCACCAAGGACTGTaGCTTAAGGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPHQGL*LKEADG
Trigger: CCCATCTGCCTCCTTAAGCCACAGTCCTTGGTGGGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGCTGTCAGCAGAGGCTaGGAACCACGCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVAVSRG*EPRKEP
Trigger: AGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCASQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAGTCCATGCTCCGCTaGCTATTCTTCCGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQSMLR*LFFRLV
Trigger: AACCAAACGGAAGAATAGCCAGCGGAGCATGGACTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAGCCCCCACCGCAATCTaGGCAGGGCTGCTCTCGACA +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGAPTAI*AGLLST
Trigger: TGTCGAGAGCAGCCCTGCCCAGATTGCGGTGGGGGC...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGCAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTTGGGCAGCCAACATaGGAAGATCGCTTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAFGQPT*EDRFSP
Trigger: TGGGCTAAAGCGATCTTCCCATGTTGGCTGCCCAAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346541.7
ENST00000375279.6
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCTGGCATGGTGGGAGGTaGGGATCTGGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAWHGGR*GSGLYL
Trigger: AAGATACAGTCCAGATCCTCACCTCCCACCATGCCA...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGGTTCCCGATACAGGTaGGAAGTTGCAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAGSRYR*EVAISS
Trigger: AGAGGATATTGCAACTTCTCACCTGTATCGGGAACC...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGAGTTCTTCACGATCTaGTTCCTGACAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGEFFTI*FLTAPQ
Trigger: CTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTCTGAGAATCATTGCTaGGAGAATCTGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASENHC*ENLHSQ
Trigger: CTGGGAGTGCAGATTCTCTCAGCAATGATTCTCAGA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTACCTGGCCTGCTGTTaGACTCTCTCTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAYLACC*TLSENH
Trigger: ATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCACAGAAGCAGGTGTTaGGGAACGCGATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGHRSRC*GTRCGC
Trigger: GCAACCACATCGCGTTCCTCAACACCTGCTTCTGTG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCATTGGACAGTCTGCTaGCTCAAGGAGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQHWTVC*LKEMGR
Trigger: CCTCCCCATCTCCTTGAGTCAGCAGACTGTCCAATG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAGACTATCCACAACTaGGCCTCATTCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQTIHN*ASFSLR
Trigger: TCTGAGAGAGAATGAGGCTCAGTTGTGGATAGTCTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCCCAAGGCAGGTCACCTaGGGTCAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSPRQVT*GQEFEI
Trigger: GATCTCGAACTCCTGACCTCAGGTGACCTGCCTTGG...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCCTTGCCTCAGCCTCCTaGGTAGCTAGGATTACAGGT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCALASAS*VARITG
Trigger: ACCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAAG...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCCCCACCTGGTAGCTaGGGTGCTGTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSPPGS*GAVSRG
Trigger: GCCTCTGCTGACAGCACCTCAGCTACCAGGTGGGGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGAACCTTCCCCACTGGATaGGTCAGGCACGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGTFPTG*VRHGAG
Trigger: GCCTGCACCGTGCCTGACTCATCCAGTGGGGAAGGT...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTGATGAACTCCTGGTaGCCTTCTGGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVMNSW*PSGPNG
Trigger: CCCATTTGGGCCAGAAGGTCACCAGGAGTTCATCAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGTTGGTTTGGTCTACTaGCCTGGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARVGLVY*PGSLET
Trigger: GGTTTCCAGGCTCCCAGGTCAGTAGACCAAACCAAC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGACCAGATGGGGTCTGTaGGGGAAGCTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQTRWGL*GKLHLR
Trigger: CCTGAGGTGGAGCTTCCCTCACAGACCCCATCTGGT...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCATGGTCTCGATCTCTTaGCCTCGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSMVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAAGAGATCGAGACCAT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR GCA 90 bp ACTGTAGAGGTCAGTCCTCTAAGCAGGCTGAATTTCCACTCCCCACCTGGTAGCTGCAGCAGTTCCCGCTaGAGCAGGGGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVEVSPLSRLNFHSPPGSCSSSR*SRGRLA
Trigger: GGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCA...GCTACCAGGTGGGGAGTGGAAATTCAGCCTGCTTAGAGGACTGACCTCTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCACAGCGCCGCAGAACTaGCATAGAGCGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCATAPQN*HRAPCF
Trigger: AAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGT...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACTCCCAGGGCTGTGCTaGCTGGAGACCAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGLPGLC*LETNSV
Trigger: GACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GTGCTGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCGCACTCCCAGGGCTGTaGTGCCTGGAGACCAACTCG +
Preference number: 4 (lower is better)
Translates to: VLEQSMLRWLFFRLVQTRALPGL*CLETNS
Trigger: CGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGC...GCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAAAAGGCTTTCTGCTCTaGCTCAGCGACGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARKGFLL*LSDGLL
Trigger: CAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQTSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGACTTCAAAGGCTTTCTaGTCTGCCTCAGCGACGGCC +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVTSKAF*SASATA
Trigger: GGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTACATCCGCTATGGTTTaGTCCATTCGTGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSATSAMV*SIRALS
Trigger: AGAGAGAGCACGAATGGAGCAAACCATAGCGGATGT...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGCATCCTCTGCGGCCTaGCGCTTGACATCCGCTATG +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSASSAA*RLTSAM
Trigger: CATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTCCGTGGACTCCTCTTaGTCATTGATGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSASVDSS*SLMTRK
Trigger: TTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGCTGGGCTGGGCACGCTaGAGTCGGCGGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQLGWAR*SRRTWQ
Trigger: CTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAG...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTCGTCAGGAAGTTGGAAAGCCACGTTAAGGGGACTGAAGGCCTCTTGGCGCAGGCAGCTCAGGCTGGCTaGCCATGTGCAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: LVRKLESHVKGTEGLLAQAAQAG*PCAENG
Trigger: GCCATTCTCTGCACATGGGCAGCCAGCCTGAGCTGC...CTGCGCCAAGAGGCCTTCAGTCCCCTTAACGTGGCTTTCCAACTTCCTGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTCCTCCACAGCCTGCTaGCTGCCGCCTGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERSSTAC*LPPAAS
Trigger: GGAGGCGGCAGGCGGCAGGCAGCAGGCTGTGGAGGA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGCTGTGGCTCAGCAGGTaGCAAATGGAGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSLWLSR*QMEPMG
Trigger: GCCCATGGGCTCCATTTGGCACCTGCTGAGCCACAG...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTCAAGAGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCTCTTGAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGAATCTCGGCTCACTaGAACCTCTGGCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGISAH*NLWLTG
Trigger: ACCTGTGAGCCAGAGGTTGCAGTGAGCCGAGATTCC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGACAGCCATGTCTCATaGAAATGTGGCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARDSHVS*KCGPVR
Trigger: CCGGACAGGGCCACATTTGCATGAGACATGGCTGTC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGATCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTTCCTGCGCCTCTAGCTaGCTACCCCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPSCASS*LPRPNG
Trigger: ACCATTGGGGCGGGGTAGGCAGCTAGAGGCGCAGGA...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGCCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWPPEVD*LGLGLN
Trigger: GTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGG...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCTCCCGAAGTGGACTaGCTAGGCCTAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPPEVD*LGLGLN
Trigger: GTTTAAGCCTAGGCCTAGGCAGTCCACTTCGGGAGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCACGGTCACCCAACCGTaGCTGAGCGGATCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSTVTQP*LSGSAR
Trigger: TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR GCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTTATTGCTGCTTCTCTaGCGACTCCAAGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALLLLL*RLQGRD
Trigger: ATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTTGGGAGGTGAGGATCTaGACTGTATCTTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAWEVRI*TVSSLP
Trigger: TGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCA...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTCCAGGATTTATTGGTaGGAGGGGTGGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWSRIYW*EGWHGG
Trigger: CCCACCATGCCACCCCTCCCACCAATAAATCCTGGA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTCCAGGATTTATTGGTaGGAGGGGTGGCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSRIYW*EGWHGG
Trigger: CCCACCATGCCACCCCTCCCACCAATAAATCCTGGA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQLSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACTCTCCTCTCTGGACTaGGCCTCTTCCCATTTCCGT +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARLSSLD*ASSHFR
Trigger: ACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGCAGGGCTGTGCTGCCTaGAGACCAACTCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLQGCAA*RPTRSP
Trigger: CGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTG...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AAGATTCAGAAAACGAAACTGTCACAGCAACCACAGCCCACAAGAGCAGGCCAGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: KIQKTKLSQQPQPTRAGQCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CTGGCCTGCTCTTGTGGGCTGTGGTTGCTGTGACAGTTTCGTTTTCTGAATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGTGTCGAGGGCTGGGCTaGGCACGCTGCAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERCRGLG*ARCSRR
Trigger: CCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACA...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGACCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGCCAGCAGGACAACTGTaGCTCAGCAGGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQPAGQL*LSRCQM
Trigger: CATTTGGCACCTGCTGAGCCACAGTTGTCCTGCTGG...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR CCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCTGACTGGAAAACTGTaGGGCTTATGTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSALTGKL*GLCVPQ
Trigger: CTGTGGAACACATAAGCCCCACAGTTTTCCAGTCAG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGGTGAATAGAAGGTCCTaGGCAGAGGCCCTCGTGACT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGVNRRS*AEALVT
Trigger: AGTCACGAGGGCCTCTGCCCAGGACCTTCTATTCAC...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGGGTGGTGCTGAGCACTaGTCTCACCCTAGACATGTC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWGGAEH*SHPRHV
Trigger: GACATGTCTAGGGTGAGACCAGTGCTCAGCACCACC...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGGCTCATCAGTGTTCCTTaGCGGGTGGTGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: SGCERMPEAQRWRAGGVGLISVP*RVVLST
Trigger: AGTGCTCAGCACCACCCGCCAAGGAACACTGATGAG...CCCGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGAGCCAAGGCCAGGTGTaGACTTGTGGTGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVSQGQV*TCGGKM
Trigger: CATCTTGCCACCACAAGTCCACACCTGGCCTTGGCT...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTCCGCAGACAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGCTGCTCTCGACAGCTaGCCATCTGGCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRRQQVHREAVGCYYSGLAALDS*PSGPCW
Trigger: CCAGCACGGGCCAGATGGCCAGCTGTCGAGAGCAGC...CAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTGTCTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CAGCTGGAGCAGGGCCAATTAAACTTACTCCAACTGATTTCTGGGTGTGAGAGGGCCCTGCGGAGCCGCTaGCACAGCCCCCACCGCAAT +
Preference number: 4 (lower is better)
Translates to: QLEQGQLNLLQLISGCERALRSR*HSPHRN
Trigger: ATTGCGGTGGGGGCTGTGCCAGCGGCTCCGCAGGGC...CCTCTCACACCCAGAAATCAGTTGGAGTAAGTTTAATTGGCCCTGCTCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp CTGGTGGTCTACACTGAAAAGGGGCCGGCTAAGTCAGCTTCAGTGGAGAGAGGACAGACACTCCAGAGTTaGAAGGGCCCTGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LVVYTEKGPAKSASVERGQTLQS*KGPAEP
Trigger: CGGCTCCGCAGGGCCCTTCCAACTCTGGAGTGTCTG...TCCTCTCTCCACTGAAGCTGACTTAGCCGGCCCCTTTTCAGTGTAGACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTCACTGAGTGTACACTaGGCAGCCGTAGGCTCGACC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSSLSVH*AAVGST
Trigger: GGTCGAGCCTACGGCTGCCCAGTGTACACTCAGTGA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGACTGAAGGCCTCTTaGCGCAGCAGCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGLKAS*RSSPFN
Trigger: ATTGAAAGGGCTGCTGCGCCAAGAGGCCTTCAGTCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp TGCTGTCAGCAGAGGCTGGGAACCACGCAAGGAACCTGGATTCGCTCCTGCGCCGCCTCGTCAGGAAGTTaGAAAGCCACGTTAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CCQQRLGTTQGTWIRSCAASSGS*KATLRG
Trigger: TCCCCTTAACGTGGCTTTCCAACTTCCTGACGAGGC...GGCGCAGGAGCGAATCCAGGTTCCTTGCGTGGTTCCCAGCCTCTGCTGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR CCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCAGGCAAGTGAGAAGGTaGAGGTGCCTCTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSRQVRR*RCLWGI
Trigger: GATGCCCCAGAGGCACCTCCACCTTCTCACTTGCCT...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGTGGCATGGTGGGAGGTaGGGATCTGGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQWHGGR*GSGLYL
Trigger: AAGATACAGTCCAGATCCTCACCTCCCACCATGCCA...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp TACGCAATCGGTGACCCCACGGTCACCCAACCGTGCCTGAGCGGATCTGCTAGAATTTGTGAGTGCAGATaGTGTGGAGGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: YAIGDPTVTQPCLSGSARICECR*CGGGRT
Trigger: GGTCCTGCCTCCTCCACATCATCTGCACTCACAAAT...TCTAGCAGATCCGCTCAGGCACGGTTGGGTGACCGTGGGGTCACCGATTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp AGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTACCAACCTCTGCGGCCTGCCGCTTaGCATCCGCTATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RAFQMRPGLDSGGKSYQPLRPAA*HPLWFA
Trigger: AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAG...AGGTTGGTAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGGAACAGTCCATGCTCCGCTGGCTATTCTTCCGTTTGGTTCAGACACGCTACCTGGCCATGCAGGTTCTaGCCACAGAGGCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WNSPCSAGYSSVWFRHATWPCRF*PQRRWC
Trigger: GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCA...GGTAGCGTGTCTGAACCAAACGGAAGAATAGCCAGCGGAGCATGGACTGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
CDS-3UTR TCA 90 bp CAGCAAGTGCACAGAGAGGCTGTGGGGTGTTATTATTCAGGCTTGGACTCTTCCGGAGCTATTCAGGGGTaGGGCAGGCCGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: QQVHREAVGCYYSGLDSSGAIQG*GRPLPD
Trigger: GTCAGGGAGCGGCCTGCCTCACCCCTGAATAGCTCC...GGAAGAGTCCAAGCCTGAATAATAACACCCCACAGCCTCTCTGTGCACTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTGACTCAAGGAGATGGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: AASSLAEHIGQSADSRRWLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CCATCTCCTTGAGTCAGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGCTGGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGTTACCCAAGTCCCCGTaGGGCCAATCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: RLAAHVQRMAHWLRRQQVLPKSP*GQSVSS
Trigger: AGATGACACTGATTGGCCTCACGGGGACTTGGGTAA...CACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TGCTGCCTGCCGCCTGCCGCCTCCAGCCTGGCTGAGCACATTGGACAGTCTGCTCAGATGTGTGTGGTCTaGGAGATAAAAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: CCLPPAASSLAEHIGQSAQMCVV*EIKGHR
Trigger: TCTGTGTCCTTTTATCTCTCAGACCACACACATCTG...AGCAGACTGTCCAATGTGCTCAGCCAGGCTGGAGGCGGCAGGCGGCAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp TTTCTGGGTGTGAGAGGATGCCAGAGGCTCAAAGATGGAGAGCAGGAGGGGTCGGATGAGACCAGGCCTTaGCAGTGGGGGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: FLGVRGCQRLKDGEQEGSDETRP*QWGQVL
Trigger: TAGGACTTGCCCCCACTGTCAAGGCCTGGTCTCATC...CGACCCCTCCTGCTCTCCATCTTTGAGCCTCTGGCATCCTCTCACACCCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp GGCTGCCCATGTGCAGAGAATGGCACACTGGCTCCGCAGACAGCAAGTGCACAGGGCAGGAGAATTGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GCPCAENGTLAPQTASAQGRRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCAATTCTCCTGCC...CTGTGCACTTGCTGTCTGCGGAGCCAGTGTGCCATTCTCTGCACATGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342704.11
ENST00000346541.7
ENST00000359606.3
ENST00000375279.6
ENST00000397800.5
ENST00000492345.5
ENST00000543126.1
CDS-3UTR TCA 90 bp AGGTCCAGGAGGGCTTTTCAGATGAGACCAGGCCTTGACAGTGGGGGCAAGTCCTGGCTCTGTGACCTGTaGGACAGCCATGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: RSRRAFQMRPGLDSGGKSWLCDL*DSHVSC
Trigger: GCATGAGACATGGCTGTCTCACAGGTCACAGAGCCA...GGACTTGCCCCCACTGTCAAGGCCTGGTCTCATCTGAAAAGC