Pregenerated sensors for CBARP-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267778Ensembl transcript IDs: ENST00000592843.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGCGTGGGCTCAGAGGGGTTGGGGTGGCGCTCGGGCCAGGCTGGTaGCAGGTGTGTGGCCTGAGTATCTGCAGGATGAGGTTCGATGGT | + |
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Preference number: 5 (lower is better) Translates to: RRGLRGVGVALGPGW*QVCGLSICRMRFDG Trigger: ACCATCGAACCTCATCCTGCAGATACTCAGGCCACACACCTGCCACCAGCCTGGCCCGAGCGCCACCCCAACCCCTCTGAGCCCACGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | GCCCCACAGCACACAGGAACAGGCAAGGCGCAAGGCATAGGGCCTTaGAGGGACGTAGCAGAGGAGGGGACCCAGGCATGGGCTGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: APQHTGTGKAQGIGP*RDVAEEGTQAWAGS Trigger: GCTTCCAGCCCATGCCTGGGTCCCCTCCTCTGCTACGTCCCTCCAAGGCCCTATGCCTTGCGCCTTGCCTGTTCCTGTGTGCTGTGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS GCA 90 bp | GGGTGTCGTTCTGATGTCACCCCACGAGGAGCAGGCCTCTGTGAGTaGACGTTTGGGCCCCGATGGGCTCTGCTCAGCTTTGTGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GCRSDVTPRGAGLCE*TFGPRWALLSFVPG Trigger: CCCCGGCACAAAGCTGAGCAGAGCCCATCGGGGCCCAAACGTGCACTCACAGAGGCCTGCTCCTCGTGGGGTGACATCAGAACGACACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | AGAGCGGTGTCAGCCTTTCTTTGGGACGAGAAAGAGGAGGCGCTGTaGGGTGTTAGGCGTGGGCTCAGAGGGGTTGGGGTGGCGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: RAVSAFLWDEKEEAL*GVRRGLRGVGVALG Trigger: CCCGAGCGCCACCCCAACCCCTCTGAGCCCACGCCTAACACCCCACAGCGCCTCCTCTTTCTCGTCCCAAAGAAAGGCTGACACCGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | GCTGAGCTGGGCCAGCCACGTGCCAGAGCGGTGTCAGCCTTTCTTTaGGACGAGAAAGAGGAGGCGCTGTGGGGTGTTAGGCGTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: AELGQPRARAVSAFL*DEKEEALWGVRRGL Trigger: GAGCCCACGCCTAACACCCCACAGCGCCTCCTCTTTCTCGTCCCAAAGAAAGGCTGACACCGCTCTGGCACGTGGCTGGCCCAGCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | GCTGGGGAAGGAGTTGAAGGAAACCGGGGTGAATCTCTGGCTGCATaGACAGAGGCCTGGGTACAGGGCACCTGCAAGGGCAGAGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: AGEGVEGNRGESLAA*TEAWVQGTCKGRGG Trigger: CCCGCCTCTGCCCTTGCAGGTGCCCTGTACCCAGGCCTCTGTCCATGCAGCCAGAGATTCACCCCGGTTTCCTTCAACTCCTTCCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | AGGTTCGATGGTCTAAGAGGGAGAAGCGGGGGCAGCTTTGGGCTTTaGGTTTCTGCGGGTGTCGTTCTGATGTCACCCCACGAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: RFDGLRGRSGGSFGL*VSAGVVLMSPHEEQ Trigger: CTGCTCCTCGTGGGGTGACATCAGAACGACACCCGCAGAAACCCAAAGCCCAAAGCTGCCCCCGCTTCTCCCTCTTAGACCATCGAACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | ACTGTGAAGCTGGGGAAGGAGTTGAAGGAAACCGGGGTGAATCTCTaGCTGCATGGACAGAGGCCTGGGTACAGGGCACCTGCAAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TVKLGKELKETGVNL*LHGQRPGYRAPARA Trigger: TGCCCTTGCAGGTGCCCTGTACCCAGGCCTCTGTCCATGCAGCCAGAGATTCACCCCGGTTTCCTTCAACTCCTTCCCCAGCTTCACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | CAGGATGAGGTTCGATGGTCTAAGAGGGAGAAGCGGGGGCAGCTTTaGGCTTTGGGTTTCTGCGGGTGTCGTTCTGATGTCACCCCACGA | + |
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Preference number: 5 (lower is better) Translates to: QDEVRWSKREKRGQL*ALGFCGCRSDVTPR Trigger: TCGTGGGGTGACATCAGAACGACACCCGCAGAAACCCAAAGCCCAAAGCTGCCCCCGCTTCTCCCTCTTAGACCATCGAACCTCATCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 90 bp | CTGGTGGCAGGTGTGTGGCCTGAGTATCTGCAGGATGAGGTTCGATaGTCTAAGAGGGAGAAGCGGGGGCAGCTTTGGGCTTTGGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LVAGVWPEYLQDEVR*SKREKRGQLWALGF Trigger: GAAACCCAAAGCCCAAAGCTGCCCCCGCTTCTCCCTCTTAGACCATCGAACCTCATCCTGCAGATACTCAGGCCACACACCTGCCACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CAA 72 bp | TCACCCCACGAGGAGCAGGCCTCTGTGAGTGCACGTTaGGGCCCCGATGGGCTCTGCTCAGCTTTGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPHEEQASVSAR*GPDGLCSALCR Trigger: CCGGCACAAAGCTGAGCAGAGCCCATCGGGGCCCAAACGTGCACTCACAGAGGCCTGCTCCTCGTGGGGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | GGAGCAGGCCTCTGTGAGTGCACGTTTGGGCCCCGATaGGCTCTGCTCAGCTTTGTGCCGGGGTCTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: GAGLCECTFGPR*ALLSFVPGSVI Trigger: GATCACAGACCCCGGCACAAAGCTGAGCAGAGCCCATCGGGGCCCAAACGTGCACTCACAGAGGCCTGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | TGGGGTGGCGCTCGGGCCAGGCTGGTGGCAGGTGTGTaGCCTGAGTATCTGCAGGATGAGGTTCGATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: WGGARARLVAGV*PEYLQDEVRWS Trigger: AGACCATCGAACCTCATCCTGCAGATACTCAGGCCACACACCTGCCACCAGCCTGGCCCGAGCGCCACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | GGCCAGCCACGTGCCAGAGCGGTGTCAGCCTTTCTTTaGGACGAGAAAGAGGAGGCGCTGTGGGGTGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: GQPRARAVSAFL*DEKEEALWGVR Trigger: CCTAACACCCCACAGCGCCTCCTCTTTCTCGTCCCAAAGAAAGGCTGACACCGCTCTGGCACGTGGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS GCA 72 bp | TCTGATGTCACCCCACGAGGAGCAGGCCTCTGTGAGTaGACGTTTGGGCCCCGATGGGCTCTGCTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SDVTPRGAGLCE*TFGPRWALLSF Trigger: AAAGCTGAGCAGAGCCCATCGGGGCCCAAACGTGCACTCACAGAGGCCTGCTCCTCGTGGGGTGACATCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | TCAGCCTTTCTTTGGGACGAGAAAGAGGAGGCGCTGTaGGGTGTTAGGCGTGGGCTCAGAGGGGTTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SAFLWDEKEEAL*GVRRGLRGVGV Trigger: CACCCCAACCCCTCTGAGCCCACGCCTAACACCCCACAGCGCCTCCTCTTTCTCGTCCCAAAGAAAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | GGAGTTGAAGGAAACCGGGGTGAATCTCTGGCTGCATaGACAGAGGCCTGGGTACAGGGCACCTGCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GVEGNRGESLAA*TEAWVQGTCKG Trigger: GCCCTTGCAGGTGCCCTGTACCCAGGCCTCTGTCCATGCAGCCAGAGATTCACCCCGGTTTCCTTCAACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | CTGGGGAAGGAGTTGAAGGAAACCGGGGTGAATCTCTaGCTGCATGGACAGAGGCCTGGGTACAGGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LGKELKETGVNL*LHGQRPGYRAP Trigger: AGGTGCCCTGTACCCAGGCCTCTGTCCATGCAGCCAGAGATTCACCCCGGTTTCCTTCAACTCCTTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CAA 90 bp | GAGGTTCGATGGTCTAAGAGGGAGAAGCGGGGGCAGCTTTGGGCTTaGGGTTTCTGCGGGTGTCGTTCTGATGTCACCCCACGAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: EVRWSKREKRGQLWA*GFCGCRSDVTPRGA Trigger: TGCTCCTCGTGGGGTGACATCAGAACGACACCCGCAGAAACCCAAAGCCCAAAGCTGCCCCCGCTTCTCCCTCTTAGACCATCGAACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CAA 90 bp | GAAGCCAAGAGCAGAAGCGCCGAGACTGTGAAGCTGGGGAAGGAGTaGAAGGAAACCGGGGTGAATCTCTGGCTGCATGGACAGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EAKSRSAETVKLGKE*KETGVNLWLHGQRP Trigger: AGGCCTCTGTCCATGCAGCCAGAGATTCACCCCGGTTTCCTTCAACTCCTTCCCCAGCTTCACAGTCTCGGCGCTTCTGCTCTTGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | GGTGTGTGGCCTGAGTATCTGCAGGATGAGGTTCGATaGTCTAAGAGGGAGAAGCGGGGGCAGCTTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GVWPEYLQDEVR*SKREKRGQLWA Trigger: AGCCCAAAGCTGCCCCCGCTTCTCCCTCTTAGACCATCGAACCTCATCCTGCAGATACTCAGGCCACACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CAA 72 bp | TGGTCTAAGAGGGAGAAGCGGGGGCAGCTTTGGGCTTaGGGTTTCTGCGGGTGTCGTTCTGATGTCACCCCA | + |
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Preference number: 6 (lower is better) Translates to: WSKREKRGQLWA*GFCGCRSDVTP Trigger: TGGGGTGACATCAGAACGACACCCGCAGAAACCCAAAGCCCAAAGCTGCCCCCGCTTCTCCCTCTTAGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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| CDS CCA 72 bp | GTTCGATGGTCTAAGAGGGAGAAGCGGGGGCAGCTTTaGGCTTTGGGTTTCTGCGGGTGTCGTTCTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: VRWSKREKRGQL*ALGFCGCRSDV Trigger: GACATCAGAACGACACCCGCAGAAACCCAAAGCCCAAAGCTGCCCCCGCTTCTCCCTCTTAGACCATCGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592843.1 |
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