RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CATSPERG (Homo sapiens)

Ensembl gene IDs: ENSG00000099338

Ensembl transcript IDs: ENST00000312265.9, ENST00000409235.8, ENST00000409410.6, ENST00000410018.5, ENST00000412458.6, ENST00000466060.5, ENST00000467739.1, ENST00000470292.2, ENST00000471517.5, ENST00000475343.6, ENST00000475646.1, ENST00000477793.2, ENST00000488473.1, ENST00000489693.2, ENST00000492088.3, ENST00000585424.1

Found 1164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGA +
Preference number: 1 (lower is better)
Translates to: AAAPGSAPGACISAD*AGSAGASPRRGRSR
Trigger: TCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 90 bp GCCCCGCCCTTCGGGCTCCACTCTGGTCCCGCGCAGACCGAGTTCTaGCTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGC +
Preference number: 1 (lower is better)
Translates to: APPFGLHSGPAQTEF*LRPERVALRRQEDG
Trigger: GCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGTCTGCGCGGGACCAGAGTGGAGCCCGAAGGGCGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 90 bp GCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCGGTGCCGAGTTCTGACTGCGTCCGG +
Preference number: 1 (lower is better)
Translates to: ASMQPGSASTTPTST*LCSWKAVPSSDCVR
Trigger: CCGGACGCAGTCAGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR CCA 90 bp GCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCGGTGCCTGCTCCGGGCAGTAAACGG +
Preference number: 1 (lower is better)
Translates to: ASMQPGSASTTPTST*LCSWKAVPAPGSKR
Trigger: CCGTTTACTGCCCGGAGCAGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR GCA 90 bp CGCCCTTCGGGCTCCACTCTGGTCCCGCGCAGACCGAGTTCTGACTaGGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAG +
Preference number: 1 (lower is better)
Translates to: RPSGSTLVPRRPSSD*VRNEWPCADRKMAK
Trigger: CTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGTCTGCGCGGGACCAGAGTGGAGCCCGAAGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 90 bp TGCAGCTGGAAGGCGGTGCCGAGTTCTGACTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTACTCAGTGCCC +
Preference number: 1 (lower is better)
Translates to: CSWKAVPSSDCVRNE*PCADRKMAKLYSVP
Trigger: GGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCCTTCCAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR CCA 90 bp ACTCTGGTCCCGCGCAGACCGAGTTCTGACTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTACTCAGTGCCC +
Preference number: 1 (lower is better)
Translates to: TLVPRRPSSDCVRNE*PCADRKMAKLYSVP
Trigger: GGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGTCTGCGCGGGACCAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 90 bp ACACGGAGTGCAGCCACAGCAGGTAGTAGACCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCGCTCCAGGACGC +
Preference number: 1 (lower is better)
Translates to: TRSAATAGSRPGPGR*RASSRCGSPSAPGR
Trigger: GCGTCCTGGAGCGCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACTACCTGCTGTGGCTGCACTCCGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 90 bp ACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACT +
Preference number: 1 (lower is better)
Translates to: TSGPAPTGRWRSCTQ*PCPGKCAPAARTRT
Trigger: AGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 90 bp GTTCTGACTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATaGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCG +
Preference number: 1 (lower is better)
Translates to: VLTASGTSGPAPTGR*RSCTQCPCPGKCAP
Trigger: CGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 90 bp AGTAGTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCGCGTACGGCTTGTCGTACACGGAGT +
Preference number: 1 (lower is better)
Translates to: SSNPGLVCCSPTSAR*GRAPGPRTACRTRS
Trigger: ACTCCGTGTACGACAAGCCGTACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 90 bp TGGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCAAGTCATAGT +
Preference number: 1 (lower is better)
Translates to: WAGSAGASPRRGRSR*RRASSSPLSAPSHS
Trigger: ACTATGACTTGGAGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 90 bp AGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTaGTTCACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACG +
Preference number: 1 (lower is better)
Translates to: SVIENSTELRLIRTS*FTEASMQPGSASTT
Trigger: CGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGTGAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 90 bp GCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTGCCTaGGGGGCAGCCAATGAACACTGGCACCATCAGGTTGCCTTGCAT +
Preference number: 1 (lower is better)
Translates to: AVFQRVGDVEGQALA*GAANEHWHHQVALH
Trigger: ATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 90 bp TCCAGACAGAGCCACTCGATGCCTGGGCTCTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTGGTCCTTGTGGTCCTCGTGGTCCAG +
Preference number: 1 (lower is better)
Translates to: SRQSHSMPGLSWDMM*KAESLVVLVVLVVQ
Trigger: CTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR TCA 90 bp GGTGAAACCCCGTCTTCGATGCCTGGGCTCTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTGGTCCTTGTGGTCCTCGTGGTCCAG +
Preference number: 1 (lower is better)
Translates to: GETPSSMPGLSWDMM*KAESLVVLVVLVVQ
Trigger: CTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAAGACGGGGTTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412458.6
3UTR CCA 90 bp GGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTaGAAGCAGAGCCCGGATGAACCCACCACATTGACCGTCATGGAA +
Preference number: 1 (lower is better)
Translates to: GTIRLPCIWGPRCVS*KQSPDEPTTLTVME
Trigger: TTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 90 bp GAGCCACTCGATGCCTGGGCTCTCGTGGGACATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGTGGTCCTCGTGGTCCAGATAAGGCT +
Preference number: 1 (lower is better)
Translates to: EPLDAWALVGHDVKG*VFGGPCGPRGPDKA
Trigger: AGCCTTATCTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR TCA 90 bp CCCGTCTTCGATGCCTGGGCTCTCGTGGGACATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGTGGTCCTCGTGGTCCAGATAAGGCT +
Preference number: 1 (lower is better)
Translates to: PVFDAWALVGHDVKG*VFGGPCGPRGPDKA
Trigger: AGCCTTATCTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAAGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412458.6
3UTR GCA 90 bp TTGGGAATGCCTCCCAGGATAAGCACAGGTGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAGACACCCACAAAGTACTGGGGCATC +
Preference number: 1 (lower is better)
Translates to: LGMPPRISTGDWSTV*HKGLDETPTKYWGI
Trigger: GATGCCCCAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
3UTR CCA 90 bp AGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCC +
Preference number: 1 (lower is better)
Translates to: RRASSSPLSAPSHSG*CAVDTSEAAPRARA
Trigger: GGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGGGCTACTTGATGCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 90 bp AGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGGCCCTTCTaGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCG +
Preference number: 1 (lower is better)
Translates to: RSCSTGTSLLTSWPF*LFIRYTSWYSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 90 bp ATTATGGAGCAGGTGGTAACTCCTATCTGCTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGATGGTC +
Preference number: 1 (lower is better)
Translates to: IMEQVVTPICSHTDH*LGSISKDTWPSLMV
Trigger: GACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGATAGGAGTTACCACCTGCTCCATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 90 bp ACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATaGGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTT +
Preference number: 1 (lower is better)
Translates to: TGRWRSCTQCPCPGK*APAARTRTRGCRSF
Trigger: AAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 90 bp ACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGT +
Preference number: 1 (lower is better)
Translates to: TRTRGCRSFRSCPFL*TRRPRFANCSPRRS
Trigger: ACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 90 bp GAAGAATTCAGGGGCAAAGATGCCTTGGGGAACATTGTCATAGCATaGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTCGTG +
Preference number: 1 (lower is better)
Translates to: EEFRGKDALGNIVIA*GILQTEPLDAWALV
Trigger: CACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR CCA 90 bp ACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCACAAAG +
Preference number: 1 (lower is better)
Translates to: TYFSLGMPPRISTGD*STVCHKGLDETPTK
Trigger: CTTTGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
3UTR CCA 90 bp TGCTTGCCCGTGGTGAGGGCCATTATGTACTCAGAGCCATTGCTATaGAAATACACAGGGCACAGCTTCTTGATGCACTCGCTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: CLPVVRAIMYSEPLL*KYTGHSFLMHSLAR
Trigger: CCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACATAATGGCCCTCACCACGGGCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR TCA 90 bp TGTACTCAGAGCCATTGCTATGGAAATACACAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGACACGAATCCAACTGCCTCCACGAG +
Preference number: 1 (lower is better)
Translates to: CTQSHCYGNTQGTAS*CTRWPGHESNCLHE
Trigger: CTCGTGGAGGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 90 bp TGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTAGGATCATCAGGAACTCCAATCCTC +
Preference number: 1 (lower is better)
Translates to: CCTGYRRCPWGPLQC*CRTLSLGSSGTPIL
Trigger: GAGGATTGGAGTTCCTGATGATCCTAGGGACAGAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 90 bp GATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTaGTGGTGTAGGACTCTGTCCCTAGGATCATCAGGAACTCCAATC +
Preference number: 1 (lower is better)
Translates to: DCCTGYRRCPWGPLQ*WCRTLSLGSSGTPI
Trigger: GATTGGAGTTCCTGATGATCCTAGGGACAGAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 90 bp CGTAGCTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTaGTCGCCAAGAAGAAGTAGTAATCCTGGTCTTGTTTGTTGTTCG +
Preference number: 1 (lower is better)
Translates to: RSCPFLWTRRPRFAN*SPRRSSNPGLVCCS
Trigger: CGAACAACAAACAAGACCAGGATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 90 bp CATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTCTaGGGCAATGAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: HARDSGNGGVGVVGF*GNEVVYLPPDHRAA
Trigger: GGCTGCACGATGATCCGGTGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR TCA 90 bp AGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTCTGAGGCAATaGGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCA +
Preference number: 1 (lower is better)
Translates to: RFRKWRRRCSRILRQ*GCLSSTGSSCSPSP
Trigger: TGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR TCA 90 bp TGCTCGTGTCCACTCCTCTGGCTCACCTATTGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAAAGATGCCTTGGGGAACATTGTCAT +
Preference number: 1 (lower is better)
Translates to: CSCPLLWLTYCSPTP*RRIQGQRCLGEHCH
Trigger: ATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGGTGAGCCAGAGGAGTGGACACGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 90 bp ACACCAGCTGGTACAGTTTGCTGTCTTCGTAGAAGAGGGTCAGCATaGTCTCATTGGATGCGTAGAGAGAGGACTGTTGCATCAGCTTTA +
Preference number: 1 (lower is better)
Translates to: TPAGTVCCLRRRGSA*SHWMRRERTVASAL
Trigger: TAAAGCTGATGCAACAGTCCTCTCTCTACGCATCCAATGAGACCATGCTGACCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 90 bp GAACGATCTGGCCATGTATTTGATGGACAGTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTCCTTGTTAGAGCTCTGCAGGAGGAA +
Preference number: 1 (lower is better)
Translates to: ERSGHVFDGQFLGEV*QVDEVFLVRALQEE
Trigger: TTCCTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAACTGTCCATCAAATACATGGCCAGATCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 90 bp GAAGAATTCAGGGGCAAAGATGCCTTGGGGAACATTGTCATAGCATaGGGCATTCTCCAGACAGAGCCACTAGGTACAAAGTCACATCTT +
Preference number: 1 (lower is better)
Translates to: EEFRGKDALGNIVIA*GILQTEPLGTKSHL
Trigger: AAGATGTGACTTTGTACCTAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412458.6
3UTR-3UTR CCA 90 bp GAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTACCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCG +
Preference number: 2 (lower is better)
Translates to: EASMQPGSASTTPTSTWLPTSAR*GRAPGP
Trigger: CGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGG...TAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: TEASMQPGSASTTPTSTWCVRNE*PCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCA...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp GAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTAGTGCCGAGTTCTGACTaGGTCCGGAACGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: EASMQPGSASTTPTSTWLVPSSD*VRNEWP
Trigger: GGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCAC...TAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR GCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCCATGCATGGCTCTTTaGTGCGGAAGGGGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: TEASMQPGSASTTPTSTWPCMAL*CGRGQP
Trigger: AGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGG...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR GCA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 2 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGTTCTTCTGCCATGCATaGCTCTTTGCTGCGGAAGGG +
Preference number: 2 (lower is better)
Translates to: RRPRPVALLARVSLRTGQFFCHA*LFAAEG
Trigger: CCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAA...CTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp GAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTAGCATCAGCTTTAAGCTaGTGTGCACCTGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: EASMQPGSASTTPTSTWLASALS*CAPASP
Trigger: AGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGC...TAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp CGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGACCTTTTATCTGGAATaGAGGTCCCCAGGCCATTGC +
Preference number: 2 (lower is better)
Translates to: RRPRPVALLARVSLRTGQTFYLE*RSPGHC
Trigger: GCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGT...CTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR GCA 90 bp GCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: ASMQPGSASTTPTSTWLCKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...GCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CGAGCGCTCCAGGACGCGCGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTAATAAGGTACACCAGCTaGTACAGTTTGCTGTCTTCG +
Preference number: 2 (lower is better)
Translates to: RALQDARRPRPVALLARVIRYTS*YSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTAT...TACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp CGAGCGCTCCAGGACGCGCGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTTCAGGAAGCCGTTaGTATTCATCTGGAACCTTT +
Preference number: 2 (lower is better)
Translates to: RALQDARRPRPVALLARVSSGSR*YSSGTF
Trigger: AAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGA...TACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CCA 90 bp CTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCGCAGGCGCATCACCGACCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 2 (lower is better)
Translates to: LLARVSLRTGQAPQAHHRPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...TCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCG +
Preference number: 2 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALPTSAR*GRAPGP
Trigger: CGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGG...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CAA 90 bp TGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTaGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: WPCADRKMAKLYSVP*SRKMRSGSSYADSR
Trigger: CCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp TATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCACAGGAGGCACGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: YLPPDHRAALHHEGPQEARARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...TGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp GCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCGCGTGTACCAGCTCATaGTACACACTTCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: ASMQPGSASTTPTSTWLCACTSS*YTLLLP
Trigger: TGGCAGAAGAAGTGTGTAGCATGAGCTGGTACACGC...GCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR GCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: TEASMQPGSASTTPTSTWFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCACGTCCACCTGGCTATaGAGCTGGAAGGCGGTGCCG +
Preference number: 2 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSTSTWL*SWKAVP
Trigger: CGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGT...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSTPTST*LCSWKA
Trigger: CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGT...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp GGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGGCATCAGCTTTAAGCTaGTGTGCACCTGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: GQAPQAHHREGAEVDEGEASALS*CAPASP
Trigger: AGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGC...CTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCAGGCGGTGCCGAGTTCTaGCTGCGTCCGGAACGAGTG +
Preference number: 2 (lower is better)
Translates to: APAARTRTRGCRSFRSCPGGAEF*LRPERV
Trigger: CACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCC...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR GCA 90 bp CAACTGTCTCTCCACGGCTTCCTTGGGTTCAGCCCTGTCCTCTGTCATCCTGGATGGCGCGTGTATCTCTaGGGACTGGGCAGGCTCCGC +
Preference number: 2 (lower is better)
Translates to: QLSLHGFLGFSPVLCHPGWRVYL*GLGRLR
Trigger: GCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCA...TCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CCA 90 bp GCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGTCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 2 (lower is better)
Translates to: APGGVVHRVRVRLVVHGVSAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...CACTCCGTGTACGACAAGCCGTACGCGGACCCGGTGCACGACCCCACCTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCGCAGGCGCATCACCGAAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATA +
Preference number: 2 (lower is better)
Translates to: LLARVSLRTGQAPQAHHRSLLTS*PFWLFI
Trigger: TATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCT...TCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTACCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 2 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHTPTST*LCSWKA
Trigger: CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGT...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp CTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCGCAGGCGCATCACCGAATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: LLARVSLRTGQAPQAHHRIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...TCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp TGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCAGATCTGCCCTTGGGGGCCATTaGAGTGCTGGTGTAGGACTC +
Preference number: 2 (lower is better)
Translates to: WKGTAGRPGSCPPGGTRSALGGH*SAGVGL
Trigger: GAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGC...AGATCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp AGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCGAGTTCTTCCTTGTTAGAGCTCTaGAGGAGGAAGTTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: STTPTSTWLCSWKAVPSSSLLEL*RRKLPQ
Trigger: CTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGA...AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 2 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGCGCCAGGTGGGGTCGTaGACCGGGTCCGCGTACGGC +
Preference number: 2 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSRQVGS*TGSAYG
Trigger: GCCGTACGCGGACCCGGTGCACGACCCCACCTGGCG...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp TATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCACAGGAGGCACCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 2 (lower is better)
Translates to: YLPPDHRAALHHEGPQEAPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...TGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCACCTGGCTATGCAGCTaGAAGGCGGTGCCGAGTTCT +
Preference number: 2 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSTWLCS*KAVPSS
Trigger: AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGT...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGCTGAGTGGCAGCCCGTaGATGTGCAGCAGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: GLGWVTGCIFKMGLIREALSGSP*MCSRKV
Trigger: CACCTTCCTGCTGCACATCCACGGGCTGCCACTCAG...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGACAGTAACTGGGGGCTaGGGCAGGTGGGACACTCAG +
Preference number: 2 (lower is better)
Translates to: GLGWVTGCIFKMGLIREATVTGG*GRWDTQ
Trigger: CTGAGTGTCCCACCTGCCCCAGCCCCCAGTTACTGT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR TCA 90 bp CCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAGAACACCTGGCCATCTCTaGTGGTCCCGAAGTGTACAT +
Preference number: 2 (lower is better)
Translates to: PGPRTACRTRSAATAGSRTPGHL*WSRSVH
Trigger: ATGTACACTTCGGGACCATCAGAGATGGCCAGGTGT...TCTACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTATGGCTGGTGTGCTGTTaGTACATCAGAAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVWLVCC*YIRSCS
Trigger: GGAGCAGCTTCTGATGTATCAACAGCACACCAGCCA...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAG +
Preference number: 2 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSSHTDH*LGSISK
Trigger: CTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTAGCGAGTTCTCGTTGTaGAAGCCCGAGCGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALSEFSL*KPERSR
Trigger: CCTGGAGCGCTCGGGCTTCCACAACGAGAACTCGCT...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCAAGCGAGTTCTCGTTGTaGAAGCCCGAGCGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: APAARTRTRGCRSFRSCPSEFSL*KPERSR
Trigger: CCTGGAGCGCTCGGGCTTCCACAACGAGAACTCGCT...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: QQEGELVVAVGARVHSSICVRNE*PCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCA...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CCA 90 bp GTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCACGTTAACGCAGTCAAAGTAGGCCAGGCGCTTGCCTaGGGGGCAGCCAATGAACAC +
Preference number: 2 (lower is better)
Translates to: VPEEKAGHLRVHVNAVKVGQALA*GAANEH
Trigger: GTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCC...TACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp CACAGCTTCTTGATGCACTCGCTGGCCAGGACACGAATCCAACTGCCTCCACGAACTGGGGCATCAGGTTaGAGAGCTCCTCTCCCACAG +
Preference number: 2 (lower is better)
Translates to: HSFLMHSLARTRIQLPPRTGASG*RAPLPQ
Trigger: CTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGT...TCGTGGAGGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGACAGGATAAGCACAGGTaGCTGGTCCACAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRQDKHR*LVHSVP
Trigger: TGGCACACTGTGGACCAGTCACCTGTGCTTATCCTG...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR GCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 2 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp GGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAAGCAGACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 2 (lower is better)
Translates to: GTIRLPCIWGPRCVSWKQTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...CTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCAGCACCTGCCAGCCCTTaGAAGGGAACAGCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: APAARTRTRGCRSFRSCPAPASP*KGTAGR
Trigger: TCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGC...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CTTGTCCAGGGGGCTGTTGAAGCGGTAGATTTCGTCCTCACTGTAGTCCTTGAGTGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCA +
Preference number: 2 (lower is better)
Translates to: LVQGAVEAVDFVLTVVLECISAD*AGSAGA
Trigger: TGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACA...CTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 2 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALSCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCAAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 2 (lower is better)
Translates to: APAARTRTRGCRSFRSCPSCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAG +
Preference number: 2 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVISTGD*STVCHK
Trigger: CTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CAA 90 bp CAAGTAGCCCCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTaGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAG +
Preference number: 2 (lower is better)
Translates to: QVAPFPLQVIVAGVL*IHQKLLHGHEPLDQ
Trigger: CTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGGGCTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGACACCTGGCCATCTCTaGTGGTCCCGAAGTGTACAT +
Preference number: 2 (lower is better)
Translates to: GLGWVTGCIFKMGLIREATPGHL*WSRSVH
Trigger: ATGTACACTTCGGGACCATCAGAGATGGCCAGGTGT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR TCA 90 bp GCTGGTACAGTTTGCTGTCTTCGTAGAAGAGGGTCAGCATGGTCTCATTGGATGCGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: AGTVCCLRRRGSAWSHWMRARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...CATCCAATGAGACCATGCTGACCCTCTTCTACGAAGACAGCAAACTGTACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp TTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCTCCGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: FPLQVIVAGVLLIHQKLLRARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...GAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp CACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAG +
Preference number: 2 (lower is better)
Translates to: HREGAEVDEGEHQVAPFPSHTDH*LGSISK
Trigger: CTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA...CGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCAGTGCCGAGTTCTGACTaGGTCCGGAACGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: RRRGRKCPGRESRASPGSVPSSD*VRNEWP
Trigger: GGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCAC...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR GCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACTTAATCAGGACCTCCTaGTTCACCGAGGCCTCGATG +
Preference number: 2 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHLIRTS*FTEASM
Trigger: CATCGAGGCCTCGGTGAAGCAGGAGGTCCTGATTAA...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCAGGCAGCCCGTGGATGTaGAGCAGGAAGGTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: RRRGRKCPGRESRASPGSGSPWM*SRKVSW
Trigger: CCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCC...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp TCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGGCCTCCATCTGGATCTaGAGCTGCTCTATCTTCCAG +
Preference number: 2 (lower is better)
Translates to: SHTDHCLGSISKDTWPSLASIWI*SCSIFQ
Trigger: CTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGC...CAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CCA 90 bp TCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGACACAGACCACTGCCTaGGCAGCATCTCAAAGGACA +
Preference number: 2 (lower is better)
Translates to: SHTDHCLGSISKDTWPSLTQTTA*AASQRT
Trigger: TGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGT...CAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp TTTCGTAGCTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGTACAGAAGATGCCCTTaGGGGCCATTGCAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: FRSCPFLWTRRPRFANCSYRRCP*GPLQCW
Trigger: CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTA...CGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp TGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCATAAGGTACACCAGCTaGTACAGTTTGCTGTCTTCG +
Preference number: 2 (lower is better)
Translates to: WSCLLFAHQRQVGSCTGSIRYTS*YSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTAT...GGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCACCAGCTGGCCCTTCTaGTTGTTCATAAGGTACACC +
Preference number: 2 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSTSWPF*LFIRYT
Trigger: GGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGT...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CCTGGAATGTCTCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGCGCCGACAGGAAGATaGCGAAGCTGTACTCAGTGC +
Preference number: 2 (lower is better)
Translates to: PGMSQRRHARDSGNGGVGAPTGR*RSCTQC
Trigger: GCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGC...ACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR TCA 90 bp TGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCAGATCTCTCGAGCTTCAGGGATaGATTCTGGGATGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: WKGTAGRPGSCPPGGTRSLELQG*ILGCGR
Trigger: TCTACCACATCCCAGAATTCATCCCTGAAGCTCGAG...AGATCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGRGRSR*RRASSS
Trigger: GCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCT...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp GGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAAGCAGATGAACCCACCACATTaGCCGTCATGGAAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: GTIRLPCIWGPRCVSWKQMNPPH*PSWKSP
Trigger: TGGAGACTTCCATGACGGTCAATGTGGTGGGTTCAT...CTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp CTTGTCCAGGGGGCTGTTGAAGCGGTAGATTTCGTCCTCACTGTAGTCCTTGAGGAAGCAGAGCCCGGATaGACCCACCACATTGACCGT +
Preference number: 2 (lower is better)
Translates to: LVQGAVEAVDFVLTVVLEEAEPG*THHIDR
Trigger: ACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTC...CTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp CCCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTCAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PLSAPSHSGWCAVDTSEAQGTAS*CTRWPG
Trigger: TCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTG...AGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp TATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTAGTAATCCATGCTTGCCCGTGGTaGGGGCCATTATGTACTCAG +
Preference number: 2 (lower is better)
Translates to: YGHAARASPIARQEEVVIHACPW*GPLCTQ
Trigger: CTGAGTACATAATGGCCCTCACCACGGGCAAGCATG...GATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR GCA 90 bp CACCTGGCCATCTCTGATGGTCCCGAAGTGTACATAACCCTCATGCTTGCCCGTACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 2 (lower is better)
Translates to: HLAISDGPEVYITLMLARTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...ACGGGCAAGCATGAGGGTTATGTACACTTCGGGACCATCAGAGATGGCCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp CAACTGTCTCTCCACGGCTTCCTTGGGTTCAGCCCTGTCCTCTGTCATCCTGGATCCTTGTTAGAGCTCTaGAGGAGGAAGTTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: QLSLHGFLGFSPVLCHPGSLLEL*RRKLPQ
Trigger: CTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGA...TCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp GGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAAGCAGCCAGCTGGTACAGTTTaGTGTCTTCGTAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: GTIRLPCIWGPRCVSWKQPAGTV*CLRRRG
Trigger: CCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGG...CTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGACCAGCTGGTACAGTTTaGTGTCTTCGTAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRPAGTV*CLRRRG
Trigger: CCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGG...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTCCGCGCTTCGCCAATTaGTCGCCAAGAAGAAGTAGT +
Preference number: 2 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALPRFAN*SPRRSS
Trigger: ACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGG...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp CTTGTCCAGGGGGCTGTTGAAGCGGTAGATTTCGTCCTCACTGTAGTCCTTGAGCTGGCACCATCAGGTTaGCTTGCATATGGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LVQGAVEAVDFVLTVVLELAPSG*LAYGAP
Trigger: TGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAG...CTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CTCCGTCTCTGTGACAATAGCCACAGCCCCACGGAACGATCTGGCCATGTATTTGCACCTGCCAGCCCTTaGAAGGGAACAGCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: LRLCDNSHSPTERSGHVFAPASP*KGTAGR
Trigger: TCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGC...AAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CAACTGTCTCTCCACGGCTTCCTTGGGTTCAGCCCTGTCCTCTGTCATCCTGGAGCAGCCAATGAACACTaGCACCATCAGGTTGCCTTG +
Preference number: 2 (lower is better)
Translates to: QLSLHGFLGFSPVLCHPGAANEH*HHQVAL
Trigger: CAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGC...TCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CCA 90 bp CATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTAAGAGAGGCCTGGGCTaGGTGACAGGTTGCATCTTC +
Preference number: 2 (lower is better)
Translates to: HCHSMGHSPDRATRCLGSKRGLG*VTGCIF
Trigger: GAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT...AGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR TCA 90 bp GGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAAGCAGATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GTIRLPCIWGPRCVSWKQIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...CTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACGAAGTCTCCATAAGGTaGTGTCCACTAATGCCTTGG +
Preference number: 2 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHEVSIR*CPLMPW
Trigger: CCAAGGCATTAGTGGACATCACCTTATGGAGACTTC...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCAATTCCAGCGTGTAGGTaGTGTCGAAGGCCAGGCGCT +
Preference number: 2 (lower is better)
Translates to: RRRGRKCPGRESRASPGSIPACR*CRRPGA
Trigger: AGCGCCTGGCCTTCGACATCACCTACACGCTGGAAT...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 2 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCACGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGC +
Preference number: 2 (lower is better)
Translates to: APAARTRTRGCRSFRSCPRSCTQ*PCPGKC
Trigger: GCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCG...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp ATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTCGTCTCAGAGACGGCATaGTCGAGATTCCGGAAATGG +
Preference number: 2 (lower is better)
Translates to: IVIAWGILQTEPLDAWALVSETA*SRFRKW
Trigger: CCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGAC...GAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CCA 90 bp TATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTAGTAATCATCTCAAAGGACACCTaGCCATCTCTGATGGTCCCG +
Preference number: 2 (lower is better)
Translates to: YGHAARASPIARQEEVVIISKDT*PSLMVP
Trigger: CGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGAT...GATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GAAGTAGTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCATCTCAAAGGACACCTaGCCATCTCTGATGGTCCCG +
Preference number: 2 (lower is better)
Translates to: EVVILVLFVVRPPAPGGVISKDT*PSLMVP
Trigger: CGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGAT...GACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp AGCCCTTGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTC +
Preference number: 2 (lower is better)
Translates to: SPWKGTAGRPGSCPPGGTFRDEF*DVVEKF
Trigger: GAACTTCTCTACCACATCCCAGAATTCATCCCTGAA...GGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCAAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCACGTTAACGCAGTCAAAGTAGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTA +
Preference number: 2 (lower is better)
Translates to: VPEEKAGHLRVHVNAVKVGPLQC*CRTLSL
Trigger: TAGGGACAGAGTCCTACACCAGCACTGCAATGGCCC...TACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CAA 90 bp AGGCCATTGCTGCTGATGTCCACACGCATGACCACACTGCCTTTCTaGATGGGCATGGGCGTGTACCAGCTCATGCTACACACTTCTTCT +
Preference number: 2 (lower is better)
Translates to: RPLLLMSTRMTTLPF*MGMGVYQLMLHTSS
Trigger: AGAAGAAGTGTGTAGCATGAGCTGGTACACGCCCATGCCCATCAAGAAAGGCAGTGTGGTCATGCGTGTGGACATCAGCAGCAATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp TATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTAGTAATCCTCGAGCTTCAGGGATaGATTCTGGGATGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: YGHAARASPIARQEEVVILELQG*ILGCGR
Trigger: TCTACCACATCCCAGAATTCATCCCTGAAGCTCGAG...GATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCAGGAAGTTGCCCCAGATaGAGATCAGATTGTTGTACG +
Preference number: 2 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPGSCPR*RSDCCT
Trigger: CGTACAACAATCTGATCTTCATCTGGGGCAACTTCC...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR TCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTCATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALHDVKG*VFGGPC
Trigger: ACAAGGACCACCAAAGACTCAGCCTTTCACATCATG...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAG +
Preference number: 2 (lower is better)
Translates to: SETACSRFRKWRRRCSRISHTDH*LGSISK
Trigger: CTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: SETACSRFRKWRRRCSRIKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp CGACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCAGCTTTAAGCTGATGTaGACCTGCCAGCCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: RQEDGEAVLSALVQENALSFKLM*TCQPLE
Trigger: TTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCT...GAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAGCTACACACTTCTTCTaGCATGCATGGCTCTTTGCT +
Preference number: 2 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGATHFF*HAWLFA
Trigger: AGCAAAGAGCCATGCATGGCAGAAGAAGTGTGTAGC...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CCA 90 bp TTTCGTAGCTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGTCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 2 (lower is better)
Translates to: FRSCPFLWTRRPRFANCSSAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...CGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTAGGCTGAGTCTTTGGTaGTCCTTGTGGTCCTCGTGG +
Preference number: 2 (lower is better)
Translates to: SETACSRFRKWRRRCSRIRLSLW*SLWSSW
Trigger: CCACGAGGACCACAAGGACCACCAAAGACTCAGCCT...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCATCAGAGCCATTGCTATaGAAATACACAGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPSEPLL*KYTGHS
Trigger: GCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGA...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CAA 90 bp GAGAAGTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATaGGGAATGCCTCCCAGGATAAGCACAGGTGACTGGTCCACAGTG +
Preference number: 2 (lower is better)
Translates to: EKSLKLVSVIRTYFS*GMPPRISTGDWSTV
Trigger: CACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
3UTR CAA 90 bp ATGTACTCAGAGCCATTGCTATGGAAATACACAGGGCACAGCTTCTaGATGCACTCGCTGGCCAGGACACGAATCCAACTGCCTCCACGA +
Preference number: 2 (lower is better)
Translates to: MYSEPLLWKYTGHSF*MHSLARTRIQLPPR
Trigger: TCGTGGAGGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: SETACSRFRKWRRRCSRIRGRSR*RRASSS
Trigger: GCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCT...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR TCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTAGGATTCTGAGGCAATaGGGTTGTTTATCTTCCACC +
Preference number: 2 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALRILRQ*GCLSST
Trigger: GGTGGAAGATAAACAACCTCATTGCCTCAGAATCCT...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp GTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: VLLIHQKLLHGHEPLDQLFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...CAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CCCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTATCTCAAAGGACACCTaGCCATCTCTGATGGTCCCG +
Preference number: 2 (lower is better)
Translates to: PLSAPSHSGWCAVDTSEAISKDT*PSLMVP
Trigger: CGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGAT...AGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp AGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 2 (lower is better)
Translates to: RKMAKLYSVPLSRKMRSGPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...GCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 2 (lower is better)
Translates to: VLLIHQKLLHGHEPLDQLPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...CAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCAAACATTGTCATAGCATaGGGCATTCTCCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPNIVIA*GILQTE
Trigger: CTCTGTCTGGAGAATGCCCCATGCTATGACAATGTT...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR CAA 90 bp GTGCTCGTGTCCACTCCTCTGGCTCACCTATTGCTCACCAACACCTaGAAGAAGAATTCAGGGGCAAAGATGCCTTGGGGAACATTGTCA +
Preference number: 2 (lower is better)
Translates to: VLVSTPLAHLLLTNT*KKNSGAKMPWGTLS
Trigger: TGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGGTGAGCCAGAGGAGTGGACACGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp TCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGTACACCTGGCCATCTCTaGTGGTCCCGAAGTGTACAT +
Preference number: 2 (lower is better)
Translates to: SVIRTYFSLGMPPRISTGTPGHL*WSRSVH
Trigger: ATGTACACTTCGGGACCATCAGAGATGGCCAGGTGT...ACCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp GTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCACGTTAACGCAGTCAAAGTATGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: VPEEKAGHLRVHVNAVKVCSPTP*RRIQGQ
Trigger: TTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCA...TACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR GCA 90 bp ATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTCTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: IVIAWGILQTEPLDAWALFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...GAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTAGCTTTAAGCTGATGTaGACCTGCCAGCCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: SETACSRFRKWRRRCSRISFKLM*TCQPLE
Trigger: TTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCT...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR GCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGC +
Preference number: 2 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLRSCTQ*PCPGKC
Trigger: GCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCG...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTTCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 2 (lower is better)
Translates to: QQEGELVVAVGARVHSSISAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CCA 90 bp TGCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTTGAATCAAGAAGAAGGGCAGCCAATGAACACTaGCACCATCAGGTTGCCTTG +
Preference number: 2 (lower is better)
Translates to: CPGNCRSLLSPNLESRRRAANEH*HHQVAL
Trigger: CAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGC...CCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp ACGAGAGAGAAGTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATTGGCGGTAGAAGTTGACTaGGGACTGGAAGGTGACCAG +
Preference number: 2 (lower is better)
Translates to: TREKSLKLVSVIRTYFSLAVEVD*GLEGDQ
Trigger: CTGGTCACCTTCCAGTCCCCAGTCAACTTCTACCGC...CAATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCACATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: RRRGRKCPGRESRASPGSHDVKG*VFGGPC
Trigger: ACAAGGACCACCAAAGACTCAGCCTTTCACATCATG...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGAGAAGAGGGTCAGCATaGTCTCATTGGATGCGTAGA +
Preference number: 2 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLRRGSA*SHWMRR
Trigger: TCTACGCATCCAATGAGACCATGCTGACCCTCTTCT...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp TTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 2 (lower is better)
Translates to: LSLSVIENSTELRLIRTSSCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...GGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CAA 90 bp GGCATCAGGTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATaGTCCCGGTCTCTCTTCAGGAAGCCGTTGATATTCATCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GIRLKSSSPTVNWML*SRSLFRKPLIFIWN
Trigger: GTTCCAGATGAATATCAACGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAACCTGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR TCA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGGGAAGTTGCCCCAGATaGAGATCAGATTGTTGTACG +
Preference number: 2 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSGSCPR*RSDCCT
Trigger: CGTACAACAATCTGATCTTCATCTGGGGCAACTTCC...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp ATGAAGATCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGCTCCTCTCCCACAGTaGATTGGATGTTATTGTCCC +
Preference number: 2 (lower is better)
Translates to: MKIRLLYGLQKMPLGAIAAPLPQ*IGCYCP
Trigger: GGGACAATAACATCCAATTCACTGTGGGAGAGGAGC...TGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGATCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CAA 90 bp AACATAGCTGCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTaGAATCAAGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: NIAALETAGVSCHQI*NQEEGVENVPEEKA
Trigger: TGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GATGAATTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAACACAGACCACTGCCTaGGCAGCATCTCAAAGGACA +
Preference number: 2 (lower is better)
Translates to: DEFWDVVEKFQVITSCVVTQTTA*AASQRT
Trigger: TGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGT...TACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp TTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCTCCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 2 (lower is better)
Translates to: FPLQVIVAGVLLIHQKLLPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...GAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR TCA 90 bp TTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTGCTTCATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: LSVIENSTELRLIRTSCFIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...GAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp AGCTTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTA +
Preference number: 2 (lower is better)
Translates to: SFLSLSVIENSTELRLIRGPLQC*CRTLSL
Trigger: TAGGGACAGAGTCCTACACCAGCACTGCAATGGCCC...CCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp AGCTTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGTACAGAAGATGCCCTTaGGGGCCATTGCAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SFLSLSVIENSTELRLIRYRRCP*GPLQCW
Trigger: CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTA...CCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp GATGAATTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAACCAGCTGGCCCTTCTaGTTGTTCATAAGGTACACC +
Preference number: 2 (lower is better)
Translates to: DEFWDVVEKFQVITSCVVTSWPF*LFIRYT
Trigger: GGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGT...TACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAATTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp TTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTC +
Preference number: 2 (lower is better)
Translates to: FWDVVEKFQVITSCVVADFRDEF*DVVEKF
Trigger: GAACTTCTCTACCACATCCCAGAATTCATCCCTGAA...GTCAGCTACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp AGCTTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATA +
Preference number: 2 (lower is better)
Translates to: SFLSLSVIENSTELRLIRSLLTS*PFWLFI
Trigger: TATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCT...CCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CCA 90 bp CTTGGGGAAGTCTGCCAGGTAGATGAAGTTTTCCTTGTTAGAGCTCTGCAGGAGCCGTTGATATTCATCTaGAACCTTTTATCTGGAATG +
Preference number: 2 (lower is better)
Translates to: LGEVCQVDEVFLVRALQEPLIFI*NLLSGM
Trigger: CATTCCAGATAAAAGGTTCCAGATGAATATCAACGG...CTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTACCTGGCAGACTTCCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR GCA 90 bp GATGTATTCAGACCAAATTATGGAGCAGGTGGTAACTCCTATCTGCTCGCACACCTGGAAACGTTTACTTaGATTACCATATCCACTCTC +
Preference number: 2 (lower is better)
Translates to: DVFRPNYGAGGNSYLLAHLETFT*ITISTL
Trigger: GAGAGTGGATATGGTAATGCAAGTAAACGTTTCCAG...GTGTGCGAGCAGATAGGAGTTACCACCTGCTCCATAATTTGGTCTGAATACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp CCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGC +
Preference number: 3 (lower is better)
Translates to: PGSAPGACISAD*AGSAGASPRRG
Trigger: GCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp CAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCGGTGCCGAGTTCTGAC +
Preference number: 3 (lower is better)
Translates to: QPGSASTTPTST*LCSWKAVPSSD
Trigger: GTCAGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR TCA 72 bp TTCGGGCTCCACTCTGGTCCCGCGCAGACCGAGTTCTaGCTGCGTCCGGAACGAGTGGCCCTGCGCCGACAG +
Preference number: 3 (lower is better)
Translates to: FGLHSGPAQTEF*LRPERVALRRQ
Trigger: CTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGTCTGCGCGGGACCAGAGTGGAGCCCGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR GCA 72 bp GGCTCCACTCTGGTCCCGCGCAGACCGAGTTCTGACTaGGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAG +
Preference number: 3 (lower is better)
Translates to: GSTLVPRRPSSD*VRNEWPCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGTCTGCGCGGGACCAGAGTGGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 72 bp GCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTaGAAGGCGGTGCCTGCTCCGGGCAGTAAACGGGGT +
Preference number: 3 (lower is better)
Translates to: ASTTPTSTWLCS*KAVPAPGSKRG
Trigger: ACCCCGTTTACTGCCCGGAGCAGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 72 bp GCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTaGAAGGCGGTGCCGAGTTCTGACTGCGTCCGGAAC +
Preference number: 3 (lower is better)
Translates to: ASTTPTSTWLCS*KAVPSSDCVRN
Trigger: GTTCCGGACGCAGTCAGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR CCA 72 bp CCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCGCGTACGGCTTGTCGT +
Preference number: 3 (lower is better)
Translates to: PGLVCCSPTSAR*GRAPGPRTACR
Trigger: ACGACAAGCCGTACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp CCGCGCAGACCGAGTTCTGACTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTAC +
Preference number: 3 (lower is better)
Translates to: PRRPSSDCVRNE*PCADRKMAKLY
Trigger: GTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGTCTGCGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CAA 90 bp AGCCCTTGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCACGGGCACGAGCCTCTaGACCAGCTGGCCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: SPWKGTAGRPGSCPPGGTTGTSL*TSWPFW
Trigger: CCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCGT...GGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCAAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCTGTACTCAGTGCCCTaGTCCAGGAAAATGCGCTCC +
Preference number: 3 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCLYSVP*SRKMRS
Trigger: GGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAG...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp AAGGCGGTGCCGAGTTCTGACTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTAC +
Preference number: 3 (lower is better)
Translates to: KAVPSSDCVRNE*PCADRKMAKLY
Trigger: GTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CAA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGGCGAGCGAGTTCTCGTaGTGGAAGCCCGAGCGCTCC +
Preference number: 3 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSASEFS*WKPERS
Trigger: GGAGCGCTCGGGCTTCCACAACGAGAACTCGCTCGC...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCGATCTGGCCATGTATTaGATGGACAGTTCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCDLAMY*MDSSLG
Trigger: CCCCAAGGAACTGTCCATCAAATACATGGCCAGATC...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp GCAGCCACAGCAGGTAGTAGACCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCGCT +
Preference number: 3 (lower is better)
Translates to: AATAGSRPGPGR*RASSRCGSPSA
Trigger: AGCGCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACTACCTGCTGTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp TTTCGTAGCTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGACGGGCACGAGCCTCTaGACCAGCTGGCCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: FRSCPFLWTRRPRFANCSTGTSL*TSWPFW
Trigger: CCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCGT...CGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCAGCGAGCGAGTTCTCGTaGTGGAAGCCCGAGCGCTCC +
Preference number: 3 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPASEFS*WKPERS
Trigger: GGAGCGCTCGGGCTTCCACAACGAGAACTCGCTCGC...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR GCA 72 bp AGCCCTTGGAAGGGAACAGCTGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGATCTCCTCCGTCTCTG +
Preference number: 3 (lower is better)
Translates to: SPWKGTAGRPGS*PPGGTRSPPSL
Trigger: CAGAGACGGAGGAGATCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCAAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 72 bp CCTGCGCCGACAGGAAGATGGCGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGT +
Preference number: 3 (lower is better)
Translates to: PAPTGRWRSCTQ*PCPGKCAPAAR
Trigger: ACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp GCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATaGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: ASGTSGPAPTGR*RSCTQCPCPGK
Trigger: TTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp TGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCAGATCTTGCCCTTGGGGGCCATaGCAGTGCTGGTGTAGGACT +
Preference number: 3 (lower is better)
Translates to: WKGTAGRPGSCPPGGTRSCPWGP*QCWCRT
Trigger: AGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCA...AGATCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp TATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTAGTAATCACGGGCACGAGCCTCTaGACCAGCTGGCCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: YGHAARASPIARQEEVVITGTSL*TSWPFW
Trigger: CCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCGT...GATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 72 bp TCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCA +
Preference number: 3 (lower is better)
Translates to: SAGASPRRGRSR*RRASSSPLSAP
Trigger: TGGAGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 72 bp TGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATaGGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGT +
Preference number: 3 (lower is better)
Translates to: WRSCTQCPCPGK*APAARTRTRGC
Trigger: ACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp GGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTaGGGCAGGTGGGACACTCAGGTCATCAACTGTCTC +
Preference number: 3 (lower is better)
Translates to: GPHKRGVTVTGG*GRWDTQVINCL
Trigger: GAGACAGTTGATGACCTGAGTGTCCCACCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CAA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGATGCCCTTGGGGGCCATaGCAGTGCTGGTGTAGGACT +
Preference number: 3 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGCPWGP*QCWCRT
Trigger: AGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCA...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp CTCCGTCTCTGTGACAATAGCCACAGCCCCACGGAACGATCTGGCCATGTATTTGCGAGCGAGTTCTCGTaGTGGAAGCCCGAGCGCTCC +
Preference number: 3 (lower is better)
Translates to: LRLCDNSHSPTERSGHVFASEFS*WKPERS
Trigger: GGAGCGCTCGGGCTTCCACAACGAGAACTCGCTCGC...AAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGACGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GAAGTAGTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCTGCCCTTGGGGGCCATaGCAGTGCTGGTGTAGGACT +
Preference number: 3 (lower is better)
Translates to: EVVILVLFVVRPPAPGGVCPWGP*QCWCRT
Trigger: AGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCA...GACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCATCCTGGTCTTGTTTGTaGTTCGCCCACCAGCGCCAG +
Preference number: 3 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPSWSCL*FAHQRQ
Trigger: CTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGA...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CAA 90 bp GCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCAAGTCATAGCCATGCATGGCTCTTaGCTGCGGAAGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: AEVDEGEHQVAPFPLQVIAMHGS*LRKGAA
Trigger: GGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGGC...TATGACTTGGAGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 72 bp AGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RSCSTGTSLLTS*PFWLFIRYTSW
Trigger: CCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp AGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTaGAAGCAGAGCCCGGATGAACCCACCACATTGACC +
Preference number: 3 (lower is better)
Translates to: RLPCIWGPRCVS*KQSPDEPTTLT
Trigger: GGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACGTGGCTGGTGTGCTGTaGATACATCAGAAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHVAGVL*IHQKLL
Trigger: GAGCAGCTTCTGATGTATCAACAGCACACCAGCCAC...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 72 bp GATGCCTGGGCTCTCGTGGGACATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGTGGTCCTCGTGGTCCA +
Preference number: 3 (lower is better)
Translates to: DAWALVGHDVKG*VFGGPCGPRGP
Trigger: TGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 72 bp AGCCACTCGATGCCTGGGCTCTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTGGTCCTTGTGGTCCTC +
Preference number: 3 (lower is better)
Translates to: SHSMPGLSWDMM*KAESLVVLVVL
Trigger: GAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR TCA 72 bp CCGTCTTCGATGCCTGGGCTCTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTGGTCCTTGTGGTCCTC +
Preference number: 3 (lower is better)
Translates to: PSSMPGLSWDMM*KAESLVVLVVL
Trigger: GAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412458.6
3UTR GCA 72 bp CAGGTGGTAACTCCTATCTGCTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAGGACACCTGGCCATCT +
Preference number: 3 (lower is better)
Translates to: QVVTPICSHTDH*LGSISKDTWPS
Trigger: AGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGATAGGAGTTACCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR GCA 72 bp CCTCCCAGGATAAGCACAGGTGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAGACACCCACAAAGTAC +
Preference number: 3 (lower is better)
Translates to: PPRISTGDWSTV*HKGLDETPTKY
Trigger: GTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
3UTR CCA 72 bp TGCCACAAGGGCCTCGATGAGACACCCACAAAGTACTaGGGCATCAGGTTGAAGAGCTCCTCTCCCACAGTG +
Preference number: 3 (lower is better)
Translates to: CHKGLDETPTKY*GIRLKSSSPTV
Trigger: CACTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
3UTR-3UTR CAA 90 bp AGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCGAGTTCTCCTGGAAACGTTTACTaGCATTACCATATCCACTCT +
Preference number: 3 (lower is better)
Translates to: STTPTSTWLCSWKAVPSSPGNVY*HYHIHS
Trigger: AGAGTGGATATGGTAATGCAAGTAAACGTTTCCAGG...AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CAA 90 bp CATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTCTGTACTCAGTGCCCTaGTCCAGGAAAATGCGCTCC +
Preference number: 3 (lower is better)
Translates to: HCHSMGHSPDRATRCLGSLYSVP*SRKMRS
Trigger: GGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAG...AGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR CCA 72 bp CGAGGTTGTAGATCTTTTCGTAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCA +
Preference number: 3 (lower is better)
Translates to: RGCRSFRSCPFL*TRRPRFANCSP
Trigger: TGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAAAGATCTACAACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp TCATTGGGAATGCCTCCCAGGATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAGGGCCTCGATGAGACA +
Preference number: 3 (lower is better)
Translates to: SLGMPPRISTGD*STVCHKGLDET
Trigger: TGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCCCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
3UTR-3UTR CAA 90 bp AGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCGATCTGGCCATGTATTaGATGGACAGTTCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: RKMAKLYSVPLSRKMRSGDLAMY*MDSSLG
Trigger: CCCCAAGGAACTGTCCATCAAATACATGGCCAGATC...GCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp ATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTCGTGGCTGGTGTGCTGTaGATACATCAGAAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: IVIAWGILQTEPLDAWALVAGVL*IHQKLL
Trigger: GAGCAGCTTCTGATGTATCAACAGCACACCAGCCAC...GAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CAA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTAGTCTTTGGTGGTCCTaGTGGTCCTCGTGGTCCAGA +
Preference number: 3 (lower is better)
Translates to: QQEGELVVAVGARVHSSISLWWS*WSSWSR
Trigger: TCTGGACCACGAGGACCACAAGGACCACCAAAGACT...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CAA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCAAGGACGTACTTCTCATaGGGAATGCCTCCCAGGATA +
Preference number: 3 (lower is better)
Translates to: APAARTRTRGCRSFRSCPRTYFS*GMPPRI
Trigger: TATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCT...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 72 bp GGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTAGGATCATCAGGAACT +
Preference number: 3 (lower is better)
Translates to: GYRRCPWGPLQC*CRTLSLGSSGT
Trigger: AGTTCCTGATGATCCTAGGGACAGAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp TCAAGTAGCCCCCTTTCCGCTCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCAGAAGCTGCTCCACGG +
Preference number: 3 (lower is better)
Translates to: SSSPLSAPSHSG*CAVDTSEAAPR
Trigger: CCGTGGAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGGGCTACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GAAGTAGTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGATCTGGCCATGTATTaGATGGACAGTTCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: EVVILVLFVVRPPAPGGVDLAMY*MDSSLG
Trigger: CCCCAAGGAACTGTCCATCAAATACATGGCCAGATC...GACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAATGTCCACTAATGCCTaGGTCATAGCAAAGCTTTTT +
Preference number: 3 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVMSTNA*VIAKLF
Trigger: AAAAAGCTTTGCTATGACCAAGGCATTAGTGGACAT...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 72 bp AGCCATTGCTATGGAAATACACAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGACACGAATCCAACTGC +
Preference number: 3 (lower is better)
Translates to: SHCYGNTQGTAS*CTRWPGHESNC
Trigger: GCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTGTATTTCCATAGCAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR GCA 72 bp CCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTaGTCGCCAAGAAGAAGTAGTAATCCTGGTCTTGTT +
Preference number: 3 (lower is better)
Translates to: PFLWTRRPRFAN*SPRRSSNPGLV
Trigger: AACAAGACCAGGATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGACAGATGAAGATCAGATaGTTGTACGGGTTACAGAAG +
Preference number: 3 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRQMKIR*LYGLQK
Trigger: CTTCTGTAACCCGTACAACAATCTGATCTTCATCTG...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCAGATGAAGATCAGATaGTTGTACGGGTTACAGAAG +
Preference number: 3 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHQMKIR*LYGLQK
Trigger: CTTCTGTAACCCGTACAACAATCTGATCTTCATCTG...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTAGGGGCAAAGATGCCTaGGGGAACATTGTCATAGCA +
Preference number: 3 (lower is better)
Translates to: QQEGELVVAVGARVHSSIRGKDA*GNIVIA
Trigger: TGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCT...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR-3UTR CAA 90 bp CCTGGAATGTCTCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTTTGCTCACCAACACCTaGAAGAAGAATTCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: PGMSQRRHARDSGNGGVGLLTNT*KKNSGA
Trigger: TGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAA...ACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CAA 90 bp CTTGGGGAAGTCTGCCAGGTAGATGAAGTTTTCCTTGTTAGAGCTCTGCAGGAGACCACACTGCCTTTCTaGATGGGCATGGGCGTGTAC +
Preference number: 3 (lower is better)
Translates to: LGEVCQVDEVFLVRALQETTLPF*MGMGVY
Trigger: GTACACGCCCATGCCCATCAAGAAAGGCAGTGTGGT...CTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTACCTGGCAGACTTCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CAA 90 bp TTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTGCTTCAAGGTCCCCAGGCCATaGCTGCTGATGTCCACACGC +
Preference number: 3 (lower is better)
Translates to: LSVIENSTELRLIRTSCFKVPRP*LLMSTR
Trigger: GCGTGTGGACATCAGCAGCAATGGCCTGGGGACCTT...GAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CAA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGTACTGGGGCATCAGGTaGAAGAGCTCCTCTCCCACA +
Preference number: 3 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSYWGIR*KSSSPT
Trigger: TGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTA...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CAA 90 bp GTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGCCTGGAAACGTTTACTaGCATTACCATATCCACTCT +
Preference number: 3 (lower is better)
Translates to: VLLIHQKLLHGHEPLDQLPGNVY*HYHIHS
Trigger: AGAGTGGATATGGTAATGCAAGTAAACGTTTCCAGG...CAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GCTGGTACAGTTTGCTGTCTTCGTAGAAGAGGGTCAGCATGGTCTCATTGGATGGTGGCTGGTGTGCTGTaGATACATCAGAAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: AGTVCCLRRRGSAWSHWMVAGVL*IHQKLL
Trigger: GAGCAGCTTCTGATGTATCAACAGCACACCAGCCAC...CATCCAATGAGACCATGCTGACCCTCTTCTACGAAGACAGCAAACTGTACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 72 bp TCCCGAAGTGTACATAACCCTCATGCTTGCCCGTGGTaGGGGCCATTATGTACTCAGAGCCATTGCTATGGA +
Preference number: 3 (lower is better)
Translates to: SRSVHNPHACPW*GPLCTQSHCYG
Trigger: TCCATAGCAATGGCTCTGAGTACATAATGGCCCTCACCACGGGCAAGCATGAGGGTTATGTACACTTCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR TCA 72 bp CCACTCCTCTGGCTCACCTATTGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAAAGATGCCTTGGGGAA +
Preference number: 3 (lower is better)
Translates to: PLLWLTYCSPTP*RRIQGQRCLGE
Trigger: TTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGGTGAGCCAGAGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR TCA 72 bp TGCTCGTGTCCACTCCTCTATTGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAAAGATGCCTTGGGGAA +
Preference number: 3 (lower is better)
Translates to: CSCPLLYCSPTP*RRIQGQRCLGE
Trigger: TTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR TCA 72 bp ACACGAATCCAACTGCCTCCACGAGAGAGAAGTCCTTaGAGCTGGTGTCAGTCATCAGGACGTACTTCTCAT +
Preference number: 3 (lower is better)
Translates to: TRIQLPPRERSP*SWCQSSGRTSH
Trigger: ATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGTGGAGGCAGTTGGATTCGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CCA 72 bp CAGGAACTCCAATCCTCGAGCTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGC +
Preference number: 3 (lower is better)
Translates to: QELQSSSFRDEF*DVVEKFQVITS
Trigger: GCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAATTCATCCCTGAAGCTCGAGGATTGGAGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp GGTACAGTTTGCTGTCTTCGTAGAAGAGGGTCAGCATaGTCTCATTGGATGCGTAGAGAGAGGACTGTTGCA +
Preference number: 3 (lower is better)
Translates to: GTVCCLRRRGSA*SHWMRRERTVA
Trigger: TGCAACAGTCCTCTCTCTACGCATCCAATGAGACCATGCTGACCCTCTTCTACGAAGACAGCAAACTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp GTGGTGAGGGCCATTATGTACTCAGAGCCATTGCTATaGAAATACACAGGGCACAGCTTCTTGATGCACTCG +
Preference number: 3 (lower is better)
Translates to: VVRAIMYSEPLL*KYTGHSFLMHS
Trigger: CGAGTGCATCAAGAAGCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACATAATGGCCCTCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR-3UTR CAA 90 bp GAAGTAGTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCATGAAGATCAGATTGTaGTACGGGTTACAGAAGATG +
Preference number: 3 (lower is better)
Translates to: EVVILVLFVVRPPAPGGVMKIRL*YGLQKM
Trigger: CATCTTCTGTAACCCGTACAACAATCTGATCTTCAT...GACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR-3UTR CAA 90 bp GTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCACGTTAACGCAGTCAAAGTATCCTGTCACCAAATCTaGAATCAAGAAGAAGGGGTA +
Preference number: 3 (lower is better)
Translates to: VPEEKAGHLRVHVNAVKVSCHQI*NQEEGV
Trigger: TACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGA...TACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR TCA 72 bp AAATGGAGGCGTAGGTGTAGTAGGATTCTGAGGCAATaGGGTTGTTTATCTTCCACCGGATCATCGTGCAGC +
Preference number: 3 (lower is better)
Translates to: KWRRRCSRILRQ*GCLSSTGSSCS
Trigger: GCTGCACGATGATCCGGTGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR CCA 72 bp TGCTGTCTTCGTAGAAGAGGGTCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACTGTTGCATCAGCTTTA +
Preference number: 3 (lower is better)
Translates to: CCLRRRGSAWSH*MRRERTVASAL
Trigger: TAAAGCTGATGCAACAGTCCTCTCTCTACGCATCCAATGAGACCATGCTGACCCTCTTCTACGAAGACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CCA 72 bp GTAAACATCAAGCAAAACAGAAAGAGAGGCCTGGGCTaGGTGACAGGTTGCATCTTCAAGATGGGCCTCATA +
Preference number: 3 (lower is better)
Translates to: VNIKQNRKRGLG*VTGCIFKMGLI
Trigger: TATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTGCTTGATGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
3UTR-3UTR CAA 90 bp TTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCACGAGAGAGAAGTCCTaGAAGCTGGTGTCAGTCATC +
Preference number: 3 (lower is better)
Translates to: LSLSVIENSTELRLIRTSTREKS*KLVSVI
Trigger: GATGACTGACACCAGCTTCAAGGACTTCTCTCTCGT...GGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR TCA 72 bp GATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTCTaGGGCAATGAGGTTGTTTATCTTCCACCGGATCAT +
Preference number: 3 (lower is better)
Translates to: DSGNGGVGVVGF*GNEVVYLPPDH
Trigger: ATGATCCGGTGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CAA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTCAAAGCTTTTTATCCTaGAGCGTAATCGAAAATAGC +
Preference number: 3 (lower is better)
Translates to: SETACSRFRKWRRRCSRIQSFLS*SVIENS
Trigger: GCTATTTTCGATTACGCTCAAGGATAAAAAGCTTTG...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
3UTR-3UTR CAA 90 bp AGCTTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGGTAGTAATCCTGGTCTaGTTTGTTGTTCGCCCACCA +
Preference number: 3 (lower is better)
Translates to: SFLSLSVIENSTELRLIRVVILV*FVVRPP
Trigger: TGGTGGGCGAACAACAAACAAGACCAGGATTACTAC...CCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCGCCAGGTGGGGTCGTaGACCGGGTCCGCGTACGGC +
Preference number: 4 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCRQVGS*TGSAYG
Trigger: GCCGTACGCGGACCCGGTGCACGACCCCACCTGGCG...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRPRPVALLARVSLRTGQCVRNE*PCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCA...CTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTACGACGCCAGGAGCACTaGCAGCAGGGCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: EASMQPGSASTTPTSTWLRRQEH*QQGPQH
Trigger: GTGCTGTGGGCCCTGCTGGCAGTGCTCCTGGCGTCG...TAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp GCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCCGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ASMQPGSASTTPTSTWLCRARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...GCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGGGGCCCGCTTGGGACTaGGTGGCAGCCCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: APGGVVHRVRVRLVVHGVGPAWD*VAARGC
Trigger: ACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCC...CACTCCGTGTACGACAAGCCGTACGCGGACCCGGTGCACGACCCCACCTGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 4 (lower is better)
Translates to: RRPRPVALLARVSLRTGQGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...CTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TEASMQPGSASTTPTSTWTPTST*LCSWKA
Trigger: CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGT...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CGAGCGCTCCAGGACGCGCGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATTCTTCTGCCATGCATaGCTCTTTGCTGCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RALQDARRPRPVALLARVFFCHA*LFAAEG
Trigger: CCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAA...TACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTGACTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LTASGTSGPAPTGRWRSCPTSAR*GRAPGP
Trigger: CGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGG...ACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTGAGTGGCAGCCCGTaGATGTGCAGCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TEASMQPGSASTTPTSTWLSGSP*MCSRKV
Trigger: CACCTTCCTGCTGCACATCCACGGGCTGCCACTCAG...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGACTGGGGCATCAGGTTaGAGAGCTCCTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: TEASMQPGSASTTPTSTWTGASG*RAPLPQ
Trigger: CTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGT...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CGAGCGCTCCAGGACGCGCGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTAATGAACCCACCACATTaGCCGTCATGGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RALQDARRPRPVALLARVMNPPH*PSWKSP
Trigger: TGGAGACTTCCATGACGGTCAATGTGGTGGGTTCAT...TACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTAGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 4 (lower is better)
Translates to: EASMQPGSASTTPTSTWLGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...TAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CGAGCGCTCCAGGACGCGCGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTACTGGAACCTTTTATCTaGAATGAAGGTCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RALQDARRPRPVALLARVLEPFI*NEGPQA
Trigger: GGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCAG...TACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGGCACCTGCCAGCCCTTaGAAGGGAACAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: TEASMQPGSASTTPTSTWAPASP*KGTAGR
Trigger: TCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGC...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CGAGCGCTCCAGGACGCGCGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTAGGAAGTTGCCCCAGATaGAGATCAGATTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: RALQDARRPRPVALLARVGSCPR*RSDCCT
Trigger: CGTACAACAATCTGATCTTCATCTGGGGCAACTTCC...TACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCCTCCATCTGGATCTaGAGCTGCTCTATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RRPRPVALLARVSLRTGQASIWI*SCSIFQ
Trigger: CTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGC...CTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCCATGCATGGCTCTTTaGTGCGGAAGGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCPCMAL*CGRGQP
Trigger: AGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGG...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CGAGCGCTCCAGGACGCGCGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTAGCTACACACTTCTTCTaGCATGCATGGCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RALQDARRPRPVALLARVATHFF*HAWLFA
Trigger: AGCAAAGAGCCATGCATGGCAGAAGAAGTGTGTAGC...TACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: ASMQPGSASTTPTSTWLCDWSTV*HKGLDE
Trigger: CTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTC...GCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCCCTTGTCCAGGAAAATaGGCTCCGGCAGCTCGTACG +
Preference number: 4 (lower is better)
Translates to: ASMQPGSASTTPTSTWLCPCPGK*APAART
Trigger: CGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG...GCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGTACAGAAGATGCCCTTaGGGGCCATTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TEASMQPGSASTTPTSTWYRRCP*GPLQCW
Trigger: CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTA...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CGGCGGCCGCGCCCGGTAGCGCTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCTCTCCCACAGTaGATTGGATGTTATTGTCCC +
Preference number: 4 (lower is better)
Translates to: RRPRPVALLARVSLRTGQAPLPQ*IGCYCP
Trigger: GGGACAATAACATCCAATTCACTGTGGGAGAGGAGC...CTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCTGTCATCCTGGAGCTaGACATGGAGCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCLSSWS*TWSPSW
Trigger: CCAGGATGGGCTCCATGTTCAGCTCCAGGATGACAG...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp GGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGAGGGCCCACAGCACCTaGACGACTCGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GQAPQAHHREGAEVDEGERAHST*TTRTLG
Trigger: GCCCAGAGTCCGAGTCGTGCAGGTGCTGTGGGCCCT...CTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGCCAGGTGGGGTCGTaGACCGGGTCCGCGTACGGC +
Preference number: 4 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHRQVGS*TGSAYG
Trigger: GCCGTACGCGGACCCGGTGCACGACCCCACCTGGCG...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGACGGGAGGCGGAGGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: GQAPQAHHREGAEVDEGETGGGG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACCTCCGCCTCCCGT...CTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp AGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCGAGTTCTTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: STTPTSTWLCSWKAVPSSCVRNE*PCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCA...AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR TCA 90 bp ACCGAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGACCTTTTATCTGGAATaGAGGTCCCCAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TEASMQPGSASTTPTSTWTFYLE*RSPGHC
Trigger: GCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGT...CCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCGCAGGCGCATCACCGAACTGGGGCATCAGGTTaGAGAGCTCCTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LLARVSLRTGQAPQAHHRTGASG*RAPLPQ
Trigger: CTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGT...TCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTAAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: EASMQPGSASTTPTSTWLRGRSR*RRASSS
Trigger: GCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCT...TAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAGGCGGTGCCGAGTTCTaGCTGCGTCCGGAACGAGTG +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVGGAEF*LRPERV
Trigger: CACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCC...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CGCCCTTCGGGCTCCACTCTGGTCCCGCGCAGACCGAGTTCTGACTGCGTCCGGACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: RPSGSTLVPRRPSSDCVRTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...CCGGACGCAGTCAGAACTCGGTCTGCGCGGGACCAGAGTGGAGCCCGAAGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTATGGCGCGTGTATCTCTaGGGACTGGGCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVWRVYL*GLGRLR
Trigger: GCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCA...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCGCAGGCGCATCACCGACTGGCACCATCAGGTTaGCTTGCATATGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLARVSLRTGQAPQAHHRLAPSG*LAYGAP
Trigger: TGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAG...TCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CTGACTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTGCAGCTGGAAGGCGGTaGCTGCTCCGGGCAGTAAAC +
Preference number: 4 (lower is better)
Translates to: LTASGTSGPAPTGRWRSCAAGRR*LLRAVN
Trigger: GTTTACTGCCCGGAGCAGGCACCGCCTTCCAGCTGC...ACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGPTSAR*GRAPGP
Trigger: CGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGG...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GAGGCCTCGATGCAGCCGGGGTCGGCCAGCACCACGCCCACGTCCACCTGGCTAACATGGAGCCCATCCTaGAATGTCTCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: EASMQPGSASTTPTSTWLTWSPS*NVSETA
Trigger: TGCCGTCTCTGAGACATTCCAGGATGGGCTCCATGT...TAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTAAGGCGTGACAGTAACTaGGGGCTGGGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LFVVRPPAPGGVVHRVRVRRDSN*GLGQVG
Trigger: TCCCACCTGCCCCAGCCCCCAGTTACTGTCACGCCT...TACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCAGGCGTGACAGTAACTaGGGGCTGGGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: WSCLLFAHQRQVGSCTGSRRDSN*GLGQVG
Trigger: TCCCACCTGCCCCAGCCCCCAGTTACTGTCACGCCT...GGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp GCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGAAGAGAGGCCTGGGCTaGGTGACAGGTTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: APGGVVHRVRVRLVVHGVKRGLG*VTGCIF
Trigger: GAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT...CACTCCGTGTACGACAAGCCGTACGCGGACCCGGTGCACGACCCCACCTGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTACCATGCATGGCTCTTTaGTGCGGAAGGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LFVVRPPAPGGVVHRVRVPCMAL*CGRGQP
Trigger: AGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGG...TACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CTGACTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTGCCCTTGGGGGCCATTaGAGTGCTGGTGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: LTASGTSGPAPTGRWRSCALGGH*SAGVGL
Trigger: GAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGC...ACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TGCATCAGCTTTAAGCTGATGTGCACCTGCCAGCCCTTGGAAGGGAACAGCTGGCGCCAGGTGGGGTCGTaGACCGGGTCCGCGTACGGC +
Preference number: 4 (lower is better)
Translates to: CISFKLMCTCQPLEGNSWRQVGS*TGSAYG
Trigger: GCCGTACGCGGACCCGGTGCACGACCCCACCTGGCG...CCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTCACCGAGGCCTCGATaGAGCCGGGGTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREASPRPR*SRGRPA
Trigger: TGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGTGA...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTATCCACCGGATCATCGTaGAGCCCTTCACCACGAGGG +
Preference number: 4 (lower is better)
Translates to: LFVVRPPAPGGVVHRVRVSTGSS*SPSPRG
Trigger: CCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGA...TACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGCACGACTCGGACTCTaGGCCACGGAGGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRARLGL*ATEDRQ
Trigger: CTGCCGGTCCTCCGTGGCCCAGAGTCCGAGTCGTGC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTAAGCGAGTTCTCGTTGTaGAAGCCCGAGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFVVRPPAPGGVVHRVRVSEFSL*KPERSR
Trigger: CCTGGAGCGCTCGGGCTTCCACAACGAGAACTCGCT...TACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSCVRNE*PCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCA...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCGAGTTCTCTGAGTGGCAGCCCGTaGATGTGCAGCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: STTPTSTWLCSWKAVPSSLSGSP*MCSRKV
Trigger: CACCTTCCTGCTGCACATCCACGGGCTGCCACTCAG...AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR CCA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCACATGGAGCCCATCCTaGAATGTCTCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCTWSPS*NVSETA
Trigger: TGCCGTCTCTGAGACATTCCAGGATGGGCTCCATGT...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRRARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGCGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LSISMDTPPALRQLLAKKRARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...CTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCGAGTTCTATTCCAGCGTGTAGGTaGTGTCGAAGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: STTPTSTWLCSWKAVPSSIPACR*CRRPGA
Trigger: AGCGCCTGGCCTTCGACATCACCTACACGCTGGAAT...AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCCGACGCCAGGAGCACTaGCAGCAGGGCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGRRQEH*QQGPQH
Trigger: GTGCTGTGGGCCCTGCTGGCAGTGCTCCTGGCGTCG...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp ACTGGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGATGCATGGCTCTTTGCTaGGGAAGGGGGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TGQAPQAHHREGAEVDEGCMALC*GRGQPP
Trigger: TGGAGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCA...TCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGGCGCGTGTATCTCTaGGGACTGGGCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAWRVYL*GLGRLR
Trigger: GCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCA...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCGCCAGGTGGGGTCGTaGACCGGGTCCGCGTACGGC +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWRQVGS*TGSAYG
Trigger: GCCGTACGCGGACCCGGTGCACGACCCCACCTGGCG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGACGCCAGGTGGGGTCGTaGACCGGGTCCGCGTACGGC +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRRQVGS*TGSAYG
Trigger: GCCGTACGCGGACCCGGTGCACGACCCCACCTGGCG...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGTCACCGAGGCCTCGATaGAGCCGGGGTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HREGAEVDEGEHQVAPFPSPRPR*SRGRPA
Trigger: TGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGTGA...CGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGATGGTCCCGAAGTGTTCACCGAGGCCTCGATaGAGCCGGGGTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLGSISKDTWPSLMVPKCSPRPR*SRGRPA
Trigger: TGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGTGA...ACACTTCGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCGCAGGCGCATCACCGATTCTTCTGCCATGCATaGCTCTTTGCTGCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLARVSLRTGQAPQAHHRFFCHA*LFAAEG
Trigger: CCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAA...TCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp ACTGGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGAAGCGAGTTCTCGTTGTaGAAGCCCGAGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGQAPQAHHREGAEVDEGSEFSL*KPERSR
Trigger: CCTGGAGCGCTCGGGCTTCCACAACGAGAACTCGCT...TCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGPTSAR*GRAPGP
Trigger: CGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGG...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREACVRNE*PCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCA...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCACCTGGCTATGCAGCTaGAAGGCGGTGCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WSCLLFAHQRQVGSCTGSTWLCS*KAVPSS
Trigger: AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGT...GGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGGCCAGGCGCTTGCCTaGGGGGCAGCCAATGAACAC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRGQALA*GAANEH
Trigger: GTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTCCTGGCGCGTGTATCTCTGCGGACTGGGCAGGCTCCGCAGGCGCATCACCGAGAAAGGCTGAGTCTTTaGTGGTCCTTGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LLARVSLRTGQAPQAHHRERLSL*WSLWSS
Trigger: CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTC...TCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAGAACAGTAACTGGGGGCTaGGGCAGGTGGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: PGPRTACRTRSAATAGSRTVTGG*GRWDTQ
Trigger: CTGAGTGTCCCACCTGCCCCAGCCCCCAGTTACTGT...TCTACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGCCTCACTGTAGTCCTTaGGGCTGTCCAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSPHCSP*GCPVWA
Trigger: GGCCCACACTGGACAGCCTCAAGGACTACAGTGAGG...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCTGTCCAGGGGGCTGTTaGAGCGGTAGATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: WSCLLFAHQRQVGSCTGSCPGGC*SGRFRP
Trigger: AGGACGAAATCTACCGCTTCAACAGCCCCCTGGACA...GGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTCGGCCAGCACCACGCCCACGTCCACCTGGCTATGCAGCTGGAAGGCGGTGCCATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GRPAPRPRPPGYAAGRRCHDVKG*VFGGPC
Trigger: ACAAGGACCACCAAAGACTCAGCCTTTCACATCATG...GCACCGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGGGCCCGCTTGGGACTaGGTGGCAGCCCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREGPAWD*VAARGC
Trigger: ACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGAGGGCCCACAGCACCTaGACGACTCGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVRAHST*TTRTLG
Trigger: GCCCAGAGTCCGAGTCGTGCAGGTGCTGTGGGCCCT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GQAPQAHHREGAEVDEGESHTDH*LGSISK
Trigger: CTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA...CTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCATGGCGCGTGTATCTCTaGGGACTGGGCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: APAARTRTRGCRSFRSCPWRVYL*GLGRLR
Trigger: GCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCA...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTACCTTGTCCAGGAAAATaGGCTCCGGCAGCTCGTACG +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVPCPGK*APAART
Trigger: CGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGTGCCGAGTTCTGACTaGGTCCGGAACGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAVPSSD*VRNEWP
Trigger: GGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCAC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp TGCATCAGCTTTAAGCTGATGTGCACCTGCCAGCCCTTGGAAGGGAACAGCTGGTCACCGAGGCCTCGATaGAGCCGGGGTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CISFKLMCTCQPLEGNSWSPRPR*SRGRPA
Trigger: TGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGTGA...CCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCGGTAGTTGCAGTAGGTaGTCGTGTCCACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WSCLLFAHQRQVGSCTGSGSCSR*SCPLLW
Trigger: CCAGAGGAGTGGACACGAGCACCTACTGCAACTACC...GGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp ATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTCGCACGACTCGGACTCTaGGCCACGGAGGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: IVIAWGILQTEPLDAWALARLGL*ATEDRQ
Trigger: CTGCCGGTCCTCCGTGGCCCAGAGTCCGAGTCGTGC...GAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CGACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCGCACGACTCGGACTCTaGGCCACGGAGGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: RQEDGEAVLSALVQENALARLGL*ATEDRQ
Trigger: CTGCCGGTCCTCCGTGGCCCAGAGTCCGAGTCGTGC...GAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVSCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGGGCCAGGCGCTTGCCTaGGGGGCAGCCAATGAACAC +
Preference number: 4 (lower is better)
Translates to: HREGAEVDEGEHQVAPFPGQALA*GAANEH
Trigger: GTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCC...CGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGGGCCAGGCGCTTGCCTaGGGGGCAGCCAATGAACAC +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVGQALA*GAANEH
Trigger: GTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCC...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGGGCCAGGCGCTTGCCTaGGGGGCAGCCAATGAACAC +
Preference number: 4 (lower is better)
Translates to: VLLIHQKLLHGHEPLDQLGQALA*GAANEH
Trigger: GTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCC...CAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTGACTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTAGGCTGAGTCTTTGGTaGTCCTTGTGGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LTASGTSGPAPTGRWRSCRLSLW*SLWSSW
Trigger: CCACGAGGACCACAAGGACCACCAAAGACTCAGCCT...ACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGCCGCTTGGGACTGAGTaGCAGCCCGTGGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: SHTDHCLGSISKDTWPSLPLGTE*QPVDVQ
Trigger: CTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGG...CAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCCGCTTGGGACTGAGTaGCAGCCCGTGGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRPLGTE*QPVDVQ
Trigger: CTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGTTTAGCCCCGTCAGGTaGCCCATGCGCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRFSPVR*PMRTRS
Trigger: GGACCTGGTGCGCATGGGCCACCTGACGGGGCTAAA...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
3UTR CAA 72 bp GCCGACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTaGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCG +
Preference number: 4 (lower is better)
Translates to: ADRKMAKLYSVP*SRKMRSGSSYA
Trigger: CGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRQGTAS*CTRWPG
Trigger: TCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGGCGCAGACCGAGTTCTaGCTGCGTCCGGAACGAGTG +
Preference number: 4 (lower is better)
Translates to: HREGAEVDEGEHQVAPFPAQTEF*LRPERV
Trigger: CACTCGTTCCGGACGCAGTCAGAACTCGGTCTGCGC...CGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCGACGCCAGGAGCACTaGCAGCAGGGCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWRRQEH*QQGPQH
Trigger: GTGCTGTGGGCCCTGCTGGCAGTGCTCCTGGCGTCG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGCCATGCATGGCTCTTTaGTGCGGAAGGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAPCMAL*CGRGQP
Trigger: AGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGG...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CGCCCTTCGGGCTCCACTCTGGTCCCGCGCAGACCGAGTTCTGACTGCGTCCGGTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RPSGSTLVPRRPSSDCVRFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...CCGGACGCAGTCAGAACTCGGTCTGCGCGGGACCAGAGTGGAGCCCGAAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAGTGCCGAGTTCTGACTaGGTCCGGAACGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGVPSSD*VRNEWP
Trigger: GGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCAC...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACGTCCACCTGGCTATaGAGCTGGAAGGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVTSTWL*SWKAVP
Trigger: CGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp TGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGATGGTCCCGAAGTGTACGTCCACCTGGCTATaGAGCTGGAAGGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: CLGSISKDTWPSLMVPKCTSTWL*SWKAVP
Trigger: CGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGT...ACACTTCGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCAGTCCCGCCCCTCTTaGCCGGTCTCAAAATGGCCG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVQSRPS*PVSKWP
Trigger: CGGCCATTTTGAGACCGGGCAAGAGGGGCGGGACTG...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410018.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGGCAGGGAACATGGCTaGGCCGCACATAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRGREHG*AAHNVA
Trigger: AGCCACGTTATGTGCGGCCCAGCCATGTTCCCTGCC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGCACGACTCGGACTCTaGGCCACGGAGGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRARLGL*ATEDRQ
Trigger: CTGCCGGTCCTCCGTGGCCCAGAGTCCGAGTCGTGC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGTGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VLLIHQKLLHGHEPLDQLCISAD*AGSAGA
Trigger: TGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACA...CAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCATGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPCISAD*AGSAGA
Trigger: TGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACA...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTPTSAR*GRAPGP
Trigger: CGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGG...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCTCCCCACCAGCGCCAGGTaGGGTCGTGCACCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: FPLQVIVAGVLLIHQKLLPTSAR*GRAPGP
Trigger: CGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGG...GAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSSCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVTPTST*LCSWKA
Trigger: CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGGCAGCCAATGAACACTaGCACCATCAGGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GQAPQAHHREGAEVDEGEAANEH*HHQVAL
Trigger: CAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGC...CTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCGTGACAGTAACTaGGGGCTGGGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGRRDSN*GLGQVG
Trigger: TCCCACCTGCCCCAGCCCCCAGTTACTGTCACGCCT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CAACTGTCTCTCCACGGCTTCCTTGGGTTCAGCCCTGTCCTCTGTCATCCTGGAACCTGGCTATGCAGCTaGAAGGCGGTGCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: QLSLHGFLGFSPVLCHPGTWLCS*KAVPAP
Trigger: CGGAGCAGGCACCGCCTTCCAGCTGCATAGCCAGGT...TCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVQGTAS*CTRWPG
Trigger: TCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTG...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCCATGCTTGCCCGTGGTaGGGGCCATTATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSHACPW*GPLCTQ
Trigger: CTGAGTACATAATGGCCCTCACCACGGGCAAGCATG...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCACAGGAGGCAGCATCAGCTTTAAGCTaGTGTGCACCTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: YLPPDHRAALHHEGPQEAASALS*CAPASP
Trigger: AGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGC...TGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGACGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRRARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCGGTGCCGAGTTCTaGCTGCGTCCGGAACGAGTG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWGGAEF*LRPERV
Trigger: CACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCC...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR TCA 90 bp CTGACTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTATGAACCCACCACATTaGCCGTCATGGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTASGTSGPAPTGRWRSCMNPPH*PSWKSP
Trigger: TGGAGACTTCCATGACGGTCAATGTGGTGGGTTCAT...ACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGAGAAGCAGAGCCCGGATaGACCCACCACATTGACCGT +
Preference number: 4 (lower is better)
Translates to: PCPGKCAPAARTRTRGCREAEPG*THHIDR
Trigger: ACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTC...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCCTCACTGTAGTCCTTaGGGCTGTCCAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVPHCSP*GCPVWA
Trigger: GGCCCACACTGGACAGCCTCAAGGACTACAGTGAGG...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGGCCCGCTTGGGACTaGGTGGCAGCCCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGGPAWD*VAARGC
Trigger: ACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCAGGGCCCGCTTGGGACTaGGTGGCAGCCCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: RRRGRKCPGRESRASPGSGPAWD*VAARGC
Trigger: ACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCC...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CCCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGGGCCCGCTTGGGACTaGGTGGCAGCCCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: PLSAPSHSGWCAVDTSEAGPAWD*VAARGC
Trigger: ACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCC...AGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGAGGGCCCACAGCACCTaGACGACTCGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWRAHST*TTRTLG
Trigger: GCCCAGAGTCCGAGTCGTGCAGGTGCTGTGGGCCCT...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp ACCACACTGCCTTTCTTGATGGGCATGGGCGTGTACCAGCTCATGCTACACACTAGGGCCCACAGCACCTaGACGACTCGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TTLPFLMGMGVYQLMLHTRAHST*TTRTLG
Trigger: GCCCAGAGTCCGAGTCGTGCAGGTGCTGTGGGCCCT...AGTGTGTAGCATGAGCTGGTACACGCCCATGCCCATCAAGAAAGGCAGTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp GTCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGCGACGCCAGGAGCACTaGCAGCAGGGCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: VSHQDVLLIGNASQDKHRRRQEH*QQGPQH
Trigger: GTGCTGTGGGCCCTGCTGGCAGTGCTCCTGGCGTCG...CCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR GCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGTGCATGGCTCTTTGCTaGGGAAGGGGGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVCMALC*GRGQPP
Trigger: TGGAGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCA...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CACAGGGCACAGCTTCTTGATGCACTCGCTGGCCAGGACACGAATCCAACTGCCGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: HRAQLLDALAGQDTNPTADWSTV*HKGLDE
Trigger: CTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTC...GGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCGCCCTTGGGGGCCATTaGAGTGCTGGTGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGALGGH*SAGVGL
Trigger: GAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGC...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CTTGTCCAGGGGGCTGTTGAAGCGGTAGATTTCGTCCTCACTGTAGTCCTTGAGTGGCGCGTGTATCTCTaGGGACTGGGCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LVQGAVEAVDFVLTVVLEWRVYL*GLGRLR
Trigger: GCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCA...CTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGTGGCGCGTGTATCTCTaGGGACTGGGCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWWRVYL*GLGRLR
Trigger: GCGGAGCCTGCCCAGTCCGCAGAGATACACGCGCCA...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCCTTGTCCAGGAAAATaGGCTCCGGCAGCTCGTACG +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRPCPGK*APAART
Trigger: CGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTCACCGAGGCCTCGATaGAGCCGGGGTCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGSPRPR*SRGRPA
Trigger: TGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGTGA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp ACTGGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGATTAATCAGGACCTCCTaGTTCACCGAGGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: TGQAPQAHHREGAEVDEGLIRTS*FTEASM
Trigger: CATCGAGGCCTCGGTGAAGCAGGAGGTCCTGATTAA...TCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGCTGGCACCATCAGGTTaGCTTGCATATGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREALAPSG*LAYGAP
Trigger: TGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAG...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCACAACTGGCACCATCAGGTTaGCTTGCATATGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AQVTGPQCATRASMRHPQLAPSG*LAYGAP
Trigger: TGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAG...TTGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGGCAGCCCGTGGATGTaGAGCAGGAAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREGSPWM*SRKVSW
Trigger: CCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CACCTGGCCATCTCTGATGGTCCCGAAGTGTACATAACCCTCATGCTTGCCCGTGGCAGCCCGTGGATGTaGAGCAGGAAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLAISDGPEVYITLMLARGSPWM*SRKVSW
Trigger: CCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCC...ACGGGCAAGCATGAGGGTTATGTACACTTCGGGACCATCAGAGATGGCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGAAACCCCGTCTTCGATaGCTGGGCTCTCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SHTDHCLGSISKDTWPSLKPRLR*LGSRGT
Trigger: TGTCCCACGAGAGCCCAGGCATCGAAGACGGGGTTT...CAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412458.6
CDS-3UTR GCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCAAGACCGAGTTCTGACTaGGTCCGGAACGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: APAARTRTRGCRSFRSCPRPSSD*VRNEWP
Trigger: GGGCCACTCGTTCCGGACGCAGTCAGAACTCGGTCT...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTATGCCAGGTGCATTCCTaGAAATCCTTGATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVCQVHS*KSLIAH
Trigger: GTGGGCGATCAAGGATTTCCAGGAATGCACCTGGCA...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTCGCTCGGGTCGATaGGTGAGTCCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRSRSGR*VSPPAC
Trigger: ACATGCTGGTGGACTCACCCATCGACCCGAGCGAGA...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTAATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: LFVVRPPAPGGVVHRVRVISTGD*STVCHK
Trigger: CTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT...TACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTGACTGCGTCCGGAACGAGTGGCCCTGCGCCGACAGGAAGATGGCGAAGCTGTAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: LTASGTSGPAPTGRWRSCSLLTS*PFWLFI
Trigger: TATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCT...ACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGAGCGAGTTCTCGTTGTaGAAGCCCGAGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVSEFSL*KPERSR
Trigger: CCTGGAGCGCTCGGGCTTCCACAACGAGAACTCGCT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAAGCGAGTTCTCGTTGTaGAAGCCCGAGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGSEFSL*KPERSR
Trigger: CCTGGAGCGCTCGGGCTTCCACAACGAGAACTCGCT...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRSCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREASCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACGCGCCGACAGGAAGATaGCGAAGCTGTACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHAPTGR*RSCTQC
Trigger: GCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGC...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGCGCCGACAGGAAGATaGCGAAGCTGTACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRAPTGR*RSCTQC
Trigger: GCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGAATGCCTCCCAGGATAAGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCGCGCCGACAGGAAGATaGCGAAGCTGTACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GMPPRISTGDWSTVCHKGAPTGR*RSCTQC
Trigger: GCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGC...GCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGAGCCACTCGATGCCTaGGCTCTCGTGGGACATGAT +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAEPLDA*ALVGHD
Trigger: ATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCACTGAGTGGCAGCCCGTaGATGTGCAGCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: APAARTRTRGCRSFRSCPLSGSP*MCSRKV
Trigger: CACCTTCCTGCTGCACATCCACGGGCTGCCACTCAG...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGCCGCTTGGGACTGAGTaGCAGCCCGTGGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREPLGTE*QPVDVQ
Trigger: CTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGG...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CACAGGGCACAGCTTCTTGATGCACTCGCTGGCCAGGACACGAATCCAACTGCCGTAGTTCCAGCTACTTaGGAGGCCGAGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HRAQLLDALAGQDTNPTAVVPAT*EAEAGA
Trigger: TGCTCCTGCCTCGGCCTCCCAAGTAGCTGGAACTAC...GGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGATTCCTGGAAATCCTTaGTCGCCCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRIPGNP*SPTAST
Trigger: CGTGGAGGCTGTGGGCGATCAAGGATTTCCAGGAAT...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCGCTCGGGTCGATGGGTaGGTCCACCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: RKMAKLYSVPLSRKMRSGARVDG*VHQHVK
Trigger: TTTCACATGCTGGTGGACTCACCCATCGACCCGAGC...GCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCAGCTCGGGTCGATGGGTaGGTCCACCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPARVDG*VHQHVK
Trigger: TTTCACATGCTGGTGGACTCACCCATCGACCCGAGC...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACTGGGGCATCAGGTTaGAGAGCTCCTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVTGASG*RAPLPQ
Trigger: CTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCACACAGGATAAGCACAGGTaGCTGGTCCACAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: STGDWSTVCHKGLDETPTQDKHR*LVHSVP
Trigger: TGGCACACTGTGGACCAGTCACCTGTGCTTATCCTG...TGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGCAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREQGTAS*CTRWPG
Trigger: TCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTG...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGACACCTGGCCATCTCTaGTGGTCCCGAAGTGTACAT +
Preference number: 4 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSTPGHL*WSRSVH
Trigger: ATGTACACTTCGGGACCATCAGAGATGGCCAGGTGT...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGGCATCAGCTTTAAGCTaGTGTGCACCTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SHTDHCLGSISKDTWPSLASALS*CAPASP
Trigger: AGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGC...CAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCGGTGCCGAGTTCTaGCTGCGTCCGGAACGAGTG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGGGAEF*LRPERV
Trigger: CACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCATTCCAGCGTGTAGGTaGTGTCGAAGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGIPACR*CRRPGA
Trigger: AGCGCCTGGCCTTCGACATCACCTACACGCTGGAAT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCAATTCCAGCGTGTAGGTaGTGTCGAAGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: APAARTRTRGCRSFRSCPIPACR*CRRPGA
Trigger: AGCGCCTGGCCTTCGACATCACCTACACGCTGGAAT...TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTACCTCACTGTAGTCCTTaGGGCTGTCCAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HFYGHAARASPIARQEEVPHCSP*GCPVWA
Trigger: GGCCCACACTGGACAGCCTCAAGGACTACAGTGAGG...TACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGTGTCCAGGGGGCTGTTaGAGCGGTAGATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRCPGGC*SGRFRP
Trigger: AGGACGAAATCTACCGCTTCAACAGCCCCCTGGACA...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCAGATCTTGTCCAGGGGGCTGTTaGAGCGGTAGATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: WKGTAGRPGSCPPGGTRSCPGGC*SGRFRP
Trigger: AGGACGAAATCTACCGCTTCAACAGCCCCCTGGACA...AGATCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTATGCATGGCTCTTTGCTaGGGAAGGGGGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HFYGHAARASPIARQEEVCMALC*GRGQPP
Trigger: TGGAGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCA...TACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp ACTGGGCAGGCTCCGCAGGCGCATCACCGAGAAGGGGCAGAAGTCGATGAAGGAGCGTGTACCAGCTCATaGTACACACTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TGQAPQAHHREGAEVDEGACTSS*YTLLLP
Trigger: TGGCAGAAGAAGTGTGTAGCATGAGCTGGTACACGC...TCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GCGCCAGGTGGGGTCGTGCACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCTGGAAACGTTTACTTaGATTACCATATCCACTCTC +
Preference number: 4 (lower is better)
Translates to: APGGVVHRVRVRLVVHGVLETFT*ITISTL
Trigger: GAGAGTGGATATGGTAATGCAAGTAAACGTTTCCAG...CACTCCGTGTACGACAAGCCGTACGCGGACCCGGTGCACGACCCCACCTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCCCTTGGGGGCCATTaGAGTGCTGGTGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREALGGH*SAGVGL
Trigger: GAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCCCGCGCTTCGCCAATTaGTCGCCAAGAAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSPRFAN*SPRRSS
Trigger: ACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGG...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCCTTGTCCAGGAAAATaGGCTCCGGCAGCTCGTACG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVPCPGK*APAART
Trigger: CGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp ATAAGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCCCTTGTCCAGGAAAATaGGCTCCGGCAGCTCGTACG +
Preference number: 4 (lower is better)
Translates to: ISTGDWSTVCHKGLDETPPCPGK*APAART
Trigger: CGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG...GGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCTGGCACCATCAGGTTaGCTTGCATATGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVLAPSG*LAYGAP
Trigger: TGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAG...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCGGCAGCCCGTGGATGTaGAGCAGGAAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGGSPWM*SRKVSW
Trigger: CCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCC...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGGCTGGGTGACAGGTTaGATCTTCAAGATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAGWVTG*IFKMGL
Trigger: GAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CACAGGGCACAGCTTCTTGATGCACTCGCTGGCCAGGACACGAATCCAACTGCCGGCTGGGTGACAGGTTaGATCTTCAAGATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HRAQLLDALAGQDTNPTAGWVTG*IFKMGL
Trigger: GAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCC...GGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp TCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGTGCACGACTCGGACTCTaGGCCACGGAGGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: SVIRTYFSLGMPPRISTGARLGL*ATEDRQ
Trigger: CTGCCGGTCCTCCGTGGCCCAGAGTCCGAGTCGTGC...ACCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCTCTCGCTCGGGTCGATaGGTGAGTCCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGSRSGR*VSPPAC
Trigger: ACATGCTGGTGGACTCACCCATCGACCCGAGCGAGA...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGTCTCGCTCGGGTCGATaGGTGAGTCCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVSRSGR*VSPPAC
Trigger: ACATGCTGGTGGACTCACCCATCGACCCGAGCGAGA...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGCISAD*AGSAGA
Trigger: TGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGAGCTGTCCATTTCTATaGACACGCCGCCCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVSCPFL*TRRPRF
Trigger: GAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTGCGTCCGGAACGAGTaGCCCTGCGCCGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGCVRNE*PCADRK
Trigger: CTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACAGGTTGCCTTGCATATaGGGCCCCAGGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHRLPCI*GPRCVS
Trigger: GGAAACACACCTGGGGCCCCATATGCAAGGCAACCT...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCTCTCCACGGCTTCCTTaGGTTCAGCCCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RKMAKLYSVPLSRKMRSGSPRLP*VQPCPL
Trigger: CAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGA...GCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCTCTCCACGGCTTCCTTaGGTTCAGCCCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGSPRLP*VQPCPL
Trigger: CAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGA...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CGACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCACAGTAACTGGGGGCTaGGGCAGGTGGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: RQEDGEAVLSALVQENALTVTGG*GRWDTQ
Trigger: CTGAGTGTCCCACCTGCCCCAGCCCCCAGTTACTGT...GAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCAGGCGTGACAGTAACTaGGGGCTGGGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGRRDSN*GLGQVG
Trigger: TCCCACCTGCCCCAGCCCCCAGTTACTGTCACGCCT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGATTTAGCCCCGTCAGGTaGCCCATGCGCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRFSPVR*PMRTRS
Trigger: GGACCTGGTGCGCATGGGCCACCTGACGGGGCTAAA...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGAAATACACAGGGCACAGCTTCTTGATGCACTCGCTGGCCAGGACACGAATCTTTAGCCCCGTCAGGTaGCCCATGCGCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: WKYTGHSFLMHSLARTRIFSPVR*PMRTRS
Trigger: GGACCTGGTGCGCATGGGCCACCTGACGGGGCTAAA...GATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTGTATTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGAAGTTGACTGGGGACTaGAAGGTGACCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRKLTGD*KVTSTR
Trigger: CCTGGTGCTGGTCACCTTCCAGTCCCCAGTCAACTT...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCTGCCCGGTCTCAAAATaGCCGCCCACACTTCCACAG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGCPVSK*PPTLPQ
Trigger: CTGTGGAAGTGTGGGCGGCCATTTTGAGACCGGGCA...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410018.5
CDS-3UTR TCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGAGTCCACCAGCATGTaGAACAAGCTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAESTSM*NKLLTV
Trigger: CACAGTGAGCAGCTTGTTTCACATGCTGGTGGACTC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCTCGGGTCGATGGGTaGGTCCACCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREARVDG*VHQHVK
Trigger: TTTCACATGCTGGTGGACTCACCCATCGACCCGAGC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTAGTAATCACTGGGGCATCAGGTTaGAGAGCTCCTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: YGHAARASPIARQEEVVITGASG*RAPLPQ
Trigger: CTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGT...GATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCCACAAGGGCCTCGATaGGACACCCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVPQGPR*DTHKVL
Trigger: CAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGG...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTGGCAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SDCCTGYRRCPWGPLQCWQGTAS*CTRWPG
Trigger: TCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTG...CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCCATGCTTGCCCGTGGTaGGGGCCATTATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGHACPW*GPLCTQ
Trigger: CTGAGTACATAATGGCCCTCACCACGGGCAAGCATG...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp ATAAGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCCATGCTTGCCCGTGGTaGGGGCCATTATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: ISTGDWSTVCHKGLDETPHACPW*GPLCTQ
Trigger: CTGAGTACATAATGGCCCTCACCACGGGCAAGCATG...GGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACACACCTGGCCATCTCTaGTGGTCCCGAAGTGTACAT +
Preference number: 4 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHTPGHL*WSRSVH
Trigger: ATGTACACTTCGGGACCATCAGAGATGGCCAGGTGT...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGCTCGAGCTTCAGGGATaGATTCTGGGATGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSLELQG*ILGCGR
Trigger: TCTACCACATCCCAGAATTCATCCCTGAAGCTCGAG...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGGCATCAGCTTTAAGCTaGTGTGCACCTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVASALS*CAPASP
Trigger: AGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGC...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGTGGCTGGTGTGCTGTTaGTACATCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRWLVCC*YIRSCS
Trigger: GGAGCAGCTTCTGATGTATCAACAGCACACCAGCCA...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGTGGCTGGTGTGCTGTTaGTACATCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SHTDHCLGSISKDTWPSLWLVCC*YIRSCS
Trigger: GGAGCAGCTTCTGATGTATCAACAGCACACCAGCCA...CAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREARGRSR*RRASSS
Trigger: GCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGAAGCAGAGCCCGGATaGACCCACCACATTGACCGT +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREEAEPG*THHIDR
Trigger: ACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGCTGGTTCTGCCGAATaGAGAGGGTGCTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRAGSAE*RGCSRW
Trigger: CCACCGAGAGCACCCTCTTCATTCGGCAGAACCAGC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp ATGAAGATCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCACGACGCCAGGAGCACTaGCAGCAGGGCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: MKIRLLYGLQKMPLGAIARRQEH*QQGPQH
Trigger: GTGCTGTGGGCCCTGCTGGCAGTGCTCCTGGCGTCG...TGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGATCTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCCATGCATGGCTCTTTaGTGCGGAAGGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWPCMAL*CGRGQP
Trigger: AGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTGGTGTCCATGCATGGCTCTTTaGTGCGGAAGGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: DCCTGYRRCPWGPLQCWCPCMAL*CGRGQP
Trigger: AGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGG...ACACCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAGCTACACACTTCTTCTaGCATGCATGGCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVATHFF*HAWLFA
Trigger: AGCAAAGAGCCATGCATGGCAGAAGAAGTGTGTAGC...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGTGCCGAGTTCTGACTaGGTCCGGAACGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGVPSSD*VRNEWP
Trigger: GGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCAC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp GCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCAAGTCATAGTGCCGAGTTCTGACTaGGTCCGGAACGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AEVDEGEHQVAPFPLQVIVPSSD*VRNEWP
Trigger: GGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCAC...TATGACTTGGAGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGACGTCCACCTGGCTATaGAGCTGGAAGGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLTSTWL*SWKAVP
Trigger: CGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGT...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp GTAACTCCTATCTGCTCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACCTGGCACCATCAGGTTaGCTTGCATATGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VTPICSHTDHCLGSISKDLAPSG*LAYGAP
Trigger: TGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAG...GTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGATAGGAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGTCCACCGGATCATCGTaGAGCCCTTCACCACGAGGG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWSTGSS*SPSPRG
Trigger: CCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGA...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTCCACCGGATCATCGTaGAGCCCTTCACCACGAGGG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGSTGSS*SPSPRG
Trigger: CCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCGGCTGGGTGACAGGTTaGATCTTCAAGATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGGWVTG*IFKMGL
Trigger: GAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCC...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTGGGGCAGGGAACATGGCTaGGCCGCACATAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: SDCCTGYRRCPWGPLQCWGREHG*AAHNVA
Trigger: AGCCACGTTATGTGCGGCCCAGCCATGTTCCCTGCC...CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp GATGAGACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACAGGCAGGGAACATGGCTaGGCCGCACATAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: DETPTKYWGIRLKSSSPTGREHG*AAHNVA
Trigger: AGCCACGTTATGTGCGGCCCAGCCATGTTCCCTGCC...TGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR CCA 90 bp TTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCACAGGAGGTTCTTCTGCCATGCATaGCTCTTTGCTGCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FIFHRIIVQPFTTRGHRRFFCHA*LFAAEG
Trigger: CCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAA...CCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGACACAGACCACTGCCTaGGCAGCATCTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRTQTTA*AASQRT
Trigger: TGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGT...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCTACAGAAGATGCCCTTaGGGGCCATTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGYRRCP*GPLQCW
Trigger: CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTA...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAGATCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: PGPRTACRTRSAATAGSRSAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...TCTACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTAAGAAGAGGGTCAGCATaGTCTCATTGGATGCGTAGA +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVRRGSA*SHWMRR
Trigger: TCTACGCATCCAATGAGACCATGCTGACCCTCTTCT...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGCISAD*AGSAGA
Trigger: TGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTTCGTAGCTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGAGGTTGCCTTGCATATaGGGCCCCAGGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FRSCPFLWTRRPRFANCSRLPCI*GPRCVS
Trigger: GGAAACACACCTGGGGCCCCATATGCAAGGCAACCT...CGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGAGCAGCCAATGAACACTaGCACCATCAGGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRAANEH*HHQVAL
Trigger: CAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGC...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGCAGCCAATGAACACTaGCACCATCAGGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRAANEH*HHQVAL
Trigger: CAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCTGAGTCTTTGGTaGTCCTTGTGGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGRLSLW*SLWSSW
Trigger: CCACGAGGACCACAAGGACCACCAAAGACTCAGCCT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGAAAGGCTGAGTCTTTaGTGGTCCTTGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAERLSL*WSLWSS
Trigger: CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAAGCAGGAAAGGCTGAGTCTTTaGTGGTCCTTGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GTIRLPCIWGPRCVSWKQERLSL*WSLWSS
Trigger: CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTC...CTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGAATGTCTCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGAGCCACTCGATGCCTaGGCTCTCGTGGGACATGAT +
Preference number: 4 (lower is better)
Translates to: PGMSQRRHARDSGNGGVGEPLDA*ALVGHD
Trigger: ATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTC...ACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCAACATTGTCATAGCATaGGGCATTCTCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: WSCLLFAHQRQVGSCTGSNIVIA*GILQTE
Trigger: CTCTGTCTGGAGAATGCCCCATGCTATGACAATGTT...GGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGAAGAGAGGCCTGGGCTaGGTGACAGGTTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVKRGLG*VTGCIF
Trigger: GAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAAGTTGACTGGGGACTaGAAGGTGACCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGKLTGD*KVTSTR
Trigger: CCTGGTGCTGGTCACCTTCCAGTCCCCAGTCAACTT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
3UTR CAA 72 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTaGATACATCAGAAGCTGCTCCACGGGCACGAGCCT +
Preference number: 4 (lower is better)
Translates to: PFPLQVIVAGVL*IHQKLLHGHEP
Trigger: AGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CGACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCTCCAGCGGTAGAAGTTaGCTGGGGACTTTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RQEDGEAVLSALVQENALSSGRS*LGTFPR
Trigger: GCGAGGAAAAGTCCCCAGTCAACTTCTACCGCTGGA...GAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312265.9
CDS-3UTR TCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGACCTTTTATCTGGAATaGAGGTCCCCAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREATFYLE*RSPGHC
Trigger: GCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCACAACCTTTTATCTGGAATaGAGGTCCCCAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: STGDWSTVCHKGLDETPTTFYLE*RSPGHC
Trigger: GCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGT...TGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGCTCCTCTCCCACAGTaGATTGGATGTTATTGTCCC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRAPLPQ*IGCYCP
Trigger: GGGACAATAACATCCAATTCACTGTGGGAGAGGAGC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GAAGTAGTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCCCACAAGGGCCTCGATaGGACACCCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: EVVILVLFVVRPPAPGGVPQGPR*DTHKVL
Trigger: CAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGG...GACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGCCACAAGGGCCTCGATaGGACACCCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREPQGPR*DTHKVL
Trigger: CAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGG...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTAGTAATCCCACAAGGGCCTCGATaGGACACCCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: YGHAARASPIARQEEVVIPQGPR*DTHKVL
Trigger: CAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGG...GATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GAAGTAGTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCCAGGATAAGCACAGGTaGCTGGTCCACAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: EVVILVLFVVRPPAPGGVQDKHR*LVHSVP
Trigger: TGGCACACTGTGGACCAGTCACCTGTGCTTATCCTG...GACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGCAGGATAAGCACAGGTaGCTGGTCCACAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREQDKHR*LVHSVP
Trigger: TGGCACACTGTGGACCAGTCACCTGTGCTTATCCTG...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GTAACTCCTATCTGCTCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACCAGGATAAGCACAGGTaGCTGGTCCACAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VTPICSHTDHCLGSISKDQDKHR*LVHSVP
Trigger: TGGCACACTGTGGACCAGTCACCTGTGCTTATCCTG...GTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGATAGGAGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCGAGAGAGAAGTCCTTaGAGCTGGTGTCAGTCATCA +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRRERSP*SWCQSS
Trigger: TGATGACTGACACCAGCTTCAAGGACTTCTCTCTCG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GGAATGCCTCCCAGGATAAGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCGAGAGAGAAGTCCTTaGAGCTGGTGTCAGTCATCA +
Preference number: 4 (lower is better)
Translates to: GMPPRISTGDWSTVCHKGRERSP*SWCQSS
Trigger: TGATGACTGACACCAGCTTCAAGGACTTCTCTCTCG...GCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCAGGGCACAGCTTCTTaGTGCACTCGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLQGTAS*CTRWPG
Trigger: TCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTG...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCGGGCACGAGCCTCTTaGCCAGCTGGCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KSLKLVSVIRTYFSLGMPRARAS*PAGPSG
Trigger: ACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCCCG...AGGCATTCCCAATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp TTTCGTAGCTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FRSCPFLWTRRPRFANCSRGRSR*RRASSS
Trigger: GCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCT...CGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGATGAACCCACCACATTaGCCGTCATGGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRMNPPH*PSWKSP
Trigger: TGGAGACTTCCATGACGGTCAATGTGGTGGGTTCAT...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTCCGTCTCTGTGACAATAGCCACAGCCCCACGGAACGATCTGGCCATGTATTTGAAGCAGAGCCCGGATaGACCCACCACATTGACCGT +
Preference number: 4 (lower is better)
Translates to: LRLCDNSHSPTERSGHVFEAEPG*THHIDR
Trigger: ACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTC...AAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAAGCAGAGCCCGGATaGACCCACCACATTGACCGT +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIREAEPG*THHIDR
Trigger: ACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGCCTCACTGTAGTCCTTaGGGCTGTCCAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGPHCSP*GCPVWA
Trigger: GGCCCACACTGGACAGCCTCAAGGACTACAGTGAGG...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGCATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YSVPLSRKMRSGSSYADSHDVKG*VFGGPC
Trigger: ACAAGGACCACCAAAGACTCAGCCTTTCACATCATG...CGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGTGTGCAGCAGGAAGGTaGGCTGGTAGTTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIRECAAGR*AGSCSR
Trigger: CCTACTGCAACTACCAGCTCACCTTCCTGCTGCACA...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTGTCCAGGGGGCTGTTGAAGCGGTAGATTTCGTCCTCACTGTAGTCCTTGAGCTGTCATCCTGGAGCTaGACATGGAGCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LVQGAVEAVDFVLTVVLELSSWS*TWSPSW
Trigger: CCAGGATGGGCTCCATGTTCAGCTCCAGGATGACAG...CTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCCTGTCATCCTGGAGCTaGACATGGAGCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGLSSWS*TWSPSW
Trigger: CCAGGATGGGCTCCATGTTCAGCTCCAGGATGACAG...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGCTGGTTCTGCCGAATaGAGAGGGTGCTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGAGSAE*RGCSRW
Trigger: CCACCGAGAGCACCCTCTTCATTCGGCAGAACCAGC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp CCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGAAGCCGTTGATAAGGGCCCACAGCACCTaGACGACTCGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTVNWMLLSRSLFRKPLIRAHST*TTRTLG
Trigger: GCCCAGAGTCCGAGTCGTGCAGGTGCTGTGGGCCCT...TATCAACGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR GCA 90 bp GTAACTCCTATCTGCTCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACGTGTCCACGGGCTCTTaGTCAAAGAAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: VTPICSHTDHCLGSISKDVSTGS*SKKLSL
Trigger: GAGCGACAGCTTCTTTGAGCAAGAGCCCGTGGACAC...GTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGATAGGAGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCGCATGTGAAACAAGCTaGTCACTGTGTCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGACETS*SLCPRA
Trigger: AGCCCGTGGACACAGTGAGCAGCTTGTTTCACATGC...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTGCATGGCTCTTTGCTaGGGAAGGGGGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGCMALC*GRGQPP
Trigger: TGGAGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp ACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACAGTGAATTGCATGGCTCTTTGCTaGGGAAGGGGGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPTKYWGIRLKSSSPTVNCMALC*GRGQPP
Trigger: TGGAGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCA...ATTCACTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGAACACTTCTTCTGCCATaGATGGCTCTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRTLLLP*MALCCG
Trigger: TCCGCAGCAAAGAGCCATGCATGGCAGAAGAAGTGT...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTGGGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: SDCCTGYRRCPWGPLQCWDWSTV*HKGLDE
Trigger: CTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTC...CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCTCCTTGTTAGAGCTCTaGAGGAGGAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGSLLEL*RRKLPQ
Trigger: CTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGA...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAGCTTTAAGCTGATGTaGACCTGCCAGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSISMDTPPALRQLLAKKSFKLM*TCQPLE
Trigger: TTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCT...CTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCCAGCTGGTACAGTTTaGTGTCTTCGTAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHPAGTV*CLRRRG
Trigger: CCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGG...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCCCGCGCTTCGCCAATTaGTCGCCAAGAAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGPRFAN*SPRRSS
Trigger: ACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGG...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTCCACCGGATCATCGTaGAGCCCTTCACCACGAGGG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGSTGSS*SPSPRG
Trigger: CCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGAAGCCGCCGAGATCGCGCCACTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SSPTVNWMLLSRSLFRKPPRSRH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGCGCGATCTCGG...CGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp GTCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGACGTCCACCTGGCTATaGAGCTGGAAGGCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VSHQDVLLIGNASQDKHRTSTWL*SWKAVP
Trigger: AGGCACCGCCTTCCAGCTGCATAGCCAGGTGGACGT...CCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGAATGTCTCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGGGCCGCACATAACGTaGCTAGAACCAGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PGMSQRRHARDSGNGGVGGPHIT*LEPVTW
Trigger: CCAAGTGACTGGTTCTAGCCACGTTATGTGCGGCCC...ACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGGGCCGCACATAACGTaGCTAGAACCAGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREGPHIT*LEPVTW
Trigger: CCAAGTGACTGGTTCTAGCCACGTTATGTGCGGCCC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCAGGGAACATGGCTaGGCCGCACATAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGGREHG*AAHNVA
Trigger: AGCCACGTTATGTGCGGCCCAGCCATGTTCCCTGCC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp ACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACAGTGAATGGCAGGGAACATGGCTaGGCCGCACATAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: TPTKYWGIRLKSSSPTVNGREHG*AAHNVA
Trigger: AGCCACGTTATGTGCGGCCCAGCCATGTTCCCTGCC...ATTCACTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGTGCCAGGTGCATTCCTaGAAATCCTTGATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVCQVHS*KSLIAH
Trigger: GTGGGCGATCAAGGATTTCCAGGAATGCACCTGGCA...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCACGTTAACGCAGTCAAAGTATCTCGCTCGGGTCGATaGGTGAGTCCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VPEEKAGHLRVHVNAVKVSRSGR*VSPPAC
Trigger: ACATGCTGGTGGACTCACCCATCGACCCGAGCGAGA...TACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCTGGAACCTTTTATCTaGAATGAAGGTCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRLEPFI*NEGPQA
Trigger: GGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCAG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CACCGAGAAGGGGCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGATCTCAAAGGACACCTaGCCATCTCTGATGGTCCCG +
Preference number: 4 (lower is better)
Translates to: HREGAEVDEGEHQVAPFPISKDT*PSLMVP
Trigger: CGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGAT...CGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGATCTCAAAGGACACCTaGCCATCTCTGATGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVISKDT*PSLMVP
Trigger: CGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGAT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCACACAGACCACTGCCTaGGCAGCATCTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: RKMAKLYSVPLSRKMRSGTQTTA*AASQRT
Trigger: TGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGT...GCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGACACAGACCACTGCCTaGGCAGCATCTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: VLLIHQKLLHGHEPLDQLTQTTA*AASQRT
Trigger: TGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGT...CAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACCGGGTCCTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: WSCLLFAHQRQVGSCTGSFRDEF*DVVEKF
Trigger: GAACTTCTCTACCACATCCCAGAATTCATCCCTGAA...GGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CACCTGGCCATCTCTGATGGTCCCGAAGTGTACATAACCCTCATGCTTGCCCGTGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: HLAISDGPEVYITLMLARGPLQC*CRTLSL
Trigger: TAGGGACAGAGTCCTACACCAGCACTGCAATGGCCC...ACGGGCAAGCATGAGGGTTATGTACACTTCGGGACCATCAGAGATGGCCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGCACCTGCCAGCCCTTaGAAGGGAACAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRAPASP*KGTAGR
Trigger: TCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGCCCTTGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCATAAGGTACACCAGCTaGTACAGTTTGCTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: SPWKGTAGRPGSCPPGGTIRYTS*YSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTAT...GGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGACCAGCTGGCCCTTCTaGTTGTTCATAAGGTACACC +
Preference number: 4 (lower is better)
Translates to: LSISMDTPPALRQLLAKKTSWPF*LFIRYT
Trigger: GGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGT...CTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREASLLTS*PFWLFI
Trigger: TATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTAATCCTGGTCTTGTTTGTTGTTCGCCCACCAGCGCCAGGTGGGGTCGTGCACAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: VILVLFVVRPPAPGGVVHSLLTS*PFWLFI
Trigger: TATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCT...GTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: LSISMDTPPALRQLLAKKSLLTS*PFWLFI
Trigger: TATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCT...CTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTTGTATCTCTGCGGACTaGGCAGGCTCCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTCISAD*AGSAGA
Trigger: TGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGATACA...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCCCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTCCGTCTCTGTGACAATAGCCACAGCCCCACGGAACGATCTGGCCATGTATTTACCTGGCTATGCAGCTaGAAGGCGGTGCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LRLCDNSHSPTERSGHVFTWLCS*KAVPSS
Trigger: AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGT...AAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAACCTGGCTATGCAGCTaGAAGGCGGTGCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRTWLCS*KAVPSS
Trigger: AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGT...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTTPTST*LCSWKA
Trigger: CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TGCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTTGAATCAAGAAGAAGGACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: CPGNCRSLLSPNLESRRRTPTST*LCSWKA
Trigger: CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGT...CCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TTTCGTAGCTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGGCAGCCAATGAACACTaGCACCATCAGGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FRSCPFLWTRRPRFANCSAANEH*HHQVAL
Trigger: CAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGC...CGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTGGCCAGGCGCTTGCCTaGGGGGCAGCCAATGAACAC +
Preference number: 4 (lower is better)
Translates to: VEELLSHSELDVIVPVSLGQALA*GAANEH
Trigger: GTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCC...AAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGAGGCTGAGTCTTTGGTaGTCCTTGTGGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIRERLSLW*SLWSSW
Trigger: CCACGAGGACCACAAGGACCACCAAAGACTCAGCCT...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCTCCCGCTTGGGACTGAGTaGCAGCCCGTGGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPLQVIVAGVLLIHQKLLPLGTE*QPVDVQ
Trigger: CTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGG...GAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGATCTCCACGGCTTCCTTaGGTTCAGCCCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRSPRLP*VQPCPL
Trigger: CAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGA...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGACAGTAACTGGGGGCTaGGGCAGGTGGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGTVTGG*GRWDTQ
Trigger: CTGAGTGTCCCACCTGCCCCAGCCCCCAGTTACTGT...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTGCGGTAGAAGTTGACTaGGGACTGGAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: HCHSMGHSPDRATRCLGSAVEVD*GLEGDQ
Trigger: CTGGTCACCTTCCAGTCCCCAGTCAACTTCTACCGC...AGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp GCTGGTACAGTTTGCTGTCTTCGTAGAAGAGGGTCAGCATGGTCTCATTGGATGCTTCGGGCTCCACTCTaGTCCCGCGCAGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: AGTVCCLRRRGSAWSHWMLRAPL*SRADRV
Trigger: AACTCGGTCTGCGCGGGACCAGAGTGGAGCCCGAAG...CATCCAATGAGACCATGCTGACCCTCTTCTACGAAGACAGCAAACTGTACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CAA 72 bp CTGCTGATGTCCACACGCATGACCACACTGCCTTTCTaGATGGGCATGGGCGTGTACCAGCTCATGCTACAC +
Preference number: 4 (lower is better)
Translates to: LLMSTRMTTLPF*MGMGVYQLMLH
Trigger: GTGTAGCATGAGCTGGTACACGCCCATGCCCATCAAGAAAGGCAGTGTGGTCATGCGTGTGGACATCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCATTCCTGGAAATCCTTaGTCGCCCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGIPGNP*SPTAST
Trigger: CGTGGAGGCTGTGGGCGATCAAGGATTTCCAGGAAT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAATTCCTGGAAATCCTTaGTCGCCCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRIPGNP*SPTAST
Trigger: CGTGGAGGCTGTGGGCGATCAAGGATTTCCAGGAAT...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGAGTCCACCAGCATGTaGAACAAGCTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREESTSM*NKLLTV
Trigger: CACAGTGAGCAGCTTGTTTCACATGCTGGTGGACTC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGCTCGGGTCGATGGGTaGGTCCACCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGARVDG*VHQHVK
Trigger: TTTCACATGCTGGTGGACTCACCCATCGACCCGAGC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGATGGTCCCGAAGTGTCCTCGCAGGAGTAGTTaGTCTTCAGGTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLGSISKDTWPSLMVPKCPRRSS*SSGSKG
Trigger: TCCCTTACTACCTGAAGATCAACTACTCCTGCGAGG...ACACTTCGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp CACCGGGTCCGCGTACGGCTTGTCGTACACGGAGTGCAGCCACAGCAGGTAGTATCTTCAGGAAGCCGTTaGTATTCATCTGGAACCTTT +
Preference number: 4 (lower is better)
Translates to: HRVRVRLVVHGVQPQQVVSSGSR*YSSGTF
Trigger: AAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGA...TACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTACGCGGACCCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp ATAAGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCGCTCCTCTCCCACAGTaGATTGGATGTTATTGTCCC +
Preference number: 4 (lower is better)
Translates to: ISTGDWSTVCHKGLDETPAPLPQ*IGCYCP
Trigger: GGGACAATAACATCCAATTCACTGTGGGAGAGGAGC...GGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGACTGGGGCATCAGGTTaGAGAGCTCCTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGTGASG*RAPLPQ
Trigger: CTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGT...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCCGAGAGAGAAGTCCTTaGAGCTGGTGTCAGTCATCA +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGRERSP*SWCQSS
Trigger: TGATGACTGACACCAGCTTCAAGGACTTCTCTCTCG...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTCCGTCTCTGTGACAATAGCCACAGCCCCACGGAACGATCTGGCCATGTATTTCATGCTTGCCCGTGGTaGGGGCCATTATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: LRLCDNSHSPTERSGHVFHACPW*GPLCTQ
Trigger: CTGAGTACATAATGGCCCTCACCACGGGCAAGCATG...AAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGACGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGACATGCTTGCCCGTGGTaGGGGCCATTATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRHACPW*GPLCTQ
Trigger: CTGAGTACATAATGGCCCTCACCACGGGCAAGCATG...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGCTCGAGCTTCAGGGATaGATTCTGGGATGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVLELQG*ILGCGR
Trigger: TCTACCACATCCCAGAATTCATCCCTGAAGCTCGAG...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGGAAGTTGCCCCAGATaGAGATCAGATTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAGSCPR*RSDCCT
Trigger: CGTACAACAATCTGATCTTCATCTGGGGCAACTTCC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGAGGAAGTTGCCCCAGATaGAGATCAGATTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRGSCPR*RSDCCT
Trigger: CGTACAACAATCTGATCTTCATCTGGGGCAACTTCC...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGAAGTCTCCATAAGGTaGTGTCCACTAATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGREVSIR*CPLMPW
Trigger: CCAAGGCATTAGTGGACATCACCTTATGGAGACTTC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGGAAGTCTCCATAAGGTaGTGTCCACTAATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSISMDTPPALRQLLAKKEVSIR*CPLMPW
Trigger: CCAAGGCATTAGTGGACATCACCTTATGGAGACTTC...CTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGTCCAGGGGGCTGTTaGAGCGGTAGATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGCPGGC*SGRFRP
Trigger: AGGACGAAATCTACCGCTTCAACAGCCCCCTGGACA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRHDVKG*VFGGPC
Trigger: ACAAGGACCACCAAAGACTCAGCCTTTCACATCATG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GTTCTTCAGGCGGCTGTATTCCAGCGTGTAGGTGATGTCGAAGGCCAGGCGCTTTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VLQAAVFQRVGDVEGQALSWDMM*KAESLV
Trigger: CACCAAAGACTCAGCCTTTCACATCATGTCCCACGA...AAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGSWDMM*KAESLV
Trigger: CACCAAAGACTCAGCCTTTCACATCATGTCCCACGA...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTGGTGTGCAGCAGGAAGGTaGGCTGGTAGTTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SDCCTGYRRCPWGPLQCWCAAGR*AGSCSR
Trigger: CCTACTGCAACTACCAGCTCACCTTCCTGCTGCACA...CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGATGTGCAGCAGGAAGGTaGGCTGGTAGTTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRCAAGR*AGSCSR
Trigger: CCTACTGCAACTACCAGCTCACCTTCCTGCTGCACA...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTTGTGCAGCAGGAAGGTaGGCTGGTAGTTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QQEGELVVAVGARVHSSICAAGR*AGSCSR
Trigger: CCTACTGCAACTACCAGCTCACCTTCCTGCTGCACA...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR TCA 90 bp AGTAGACCAGGCCCTGGTAGATGGCGAGCGAGTTCTCGTTGTGGAAGCCCGAGCAGGATTCTGAGGCAATaGGGTTGTTTATCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SRPGPGRWRASSRCGSPSRILRQ*GCLSST
Trigger: GGTGGAAGATAAACAACCTCATTGCCTCAGAATCCT...GCTCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCAACACTTCTTCTGCCATaGATGGCTCTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPTLLLP*MALCCG
Trigger: TCCGCAGCAAAGAGCCATGCATGGCAGAAGAAGTGT...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGGCTACACACTTCTTCTaGCATGCATGGCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRATHFF*HAWLFA
Trigger: AGCAAAGAGCCATGCATGGCAGAAGAAGTGTGTAGC...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGAGCTACACACTTCTTCTaGCATGCATGGCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRATHFF*HAWLFA
Trigger: AGCAAAGAGCCATGCATGGCAGAAGAAGTGTGTAGC...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGDWSTV*HKGLDE
Trigger: CTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGGAATCCAACTGCCACTaGCGCGGTTTCTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVESNCH*RGFSHR
Trigger: TCTATGAGAGAAACCGCGGCAGTGGCAGTTGGATTC...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGATCGCACACAGACCACTaGCTGGGCAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRSHTDH*LGSISK
Trigger: CTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGSHTDH*LGSISK
Trigger: CTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGCCCTTGGGGGCCATTaGAGTGCTGGTGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTALGGH*SAGVGL
Trigger: GAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTTCCTTGTTAGAGCTCTaGAGGAGGAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HCHSMGHSPDRATRCLGSSLLEL*RRKLPQ
Trigger: CTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGA...AGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCACAGGAGGCATTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: YLPPDHRAALHHEGPQEAFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...TGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCTCGGTAGACCCGGTAGCTaGCCTCCAGGAGGTACCAGA +
Preference number: 4 (lower is better)
Translates to: FPLQVIVAGVLLIHQKLLGRPGS*PPGGTR
Trigger: TCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACC...GAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGCTTTAAGCTGATGTaGACCTGCCAGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGSFKLM*TCQPLE
Trigger: TTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCCCAGCTGGTACAGTTTaGTGTCTTCGTAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RKMAKLYSVPLSRKMRSGPAGTV*CLRRRG
Trigger: CCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGG...GCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCCGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGRSCTQ*PCPGKC
Trigger: GCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCG...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTAACTCCTATCTGCTCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACTGCCAGGTGCATTCCTaGAAATCCTTGATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: VTPICSHTDHCLGSISKDCQVHS*KSLIAH
Trigger: GTGGGCGATCAAGGATTTCCAGGAATGCACCTGGCA...GTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGATAGGAGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGAATGTCTCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGCGGTAGAAGTTGACTaGGGACTTTTCCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGMSQRRHARDSGNGGVGAVEVD*GLFLAG
Trigger: TCCTGCGAGGAAAAGTCCCCAGTCAACTTCTACCGC...ACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312265.9
CDS-3UTR CCA 90 bp GTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCACAAAGTACTGCGGTAGAAGTTGACTaGGGACTTTTCCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTGPQCATRASMRHPQSTAVEVD*GLFLAG
Trigger: TCCTGCGAGGAAAAGTCCCCAGTCAACTTCTACCGC...AGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475343.6
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGTTCTTCTGCCATGCATaGCTCTTTGCTGCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREFFCHA*LFAAEG
Trigger: CCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAA...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp ATAAGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCCTGGAACCTTTTATCTaGAATGAAGGTCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ISTGDWSTVCHKGLDETPLEPFI*NEGPQA
Trigger: GGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCAG...GGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGISTGD*STVCHK
Trigger: CTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGISTGD*STVCHK
Trigger: CTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTCAGAGCCATTGCTATaGAAATACACAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREASEPLL*KYTGHS
Trigger: GCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGA...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRGPLQC*CRTLSL
Trigger: TAGGGACAGAGTCCTACACCAGCACTGCAATGGCCC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCATTTCTACAGAAGATGCCCTTaGGGGCCATTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RQLVRGLEVVDLFVAVHFYRRCP*GPLQCW
Trigger: CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTA...GAAATGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGGCACCTGCCAGCCCTTaGAAGGGAACAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLAPASP*KGTAGR
Trigger: TCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGC...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREASAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGAGAAGAGGGTCAGCATaGTCTCATTGGATGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREARRGSA*SHWMRR
Trigger: TCTACGCATCCAATGAGACCATGCTGACCCTCTTCT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGAACCAGCTGGCCCTTCTaGTTGTTCATAAGGTACACC +
Preference number: 4 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGTSWPF*LFIRYT
Trigger: GGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGT...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTCCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: PLSAPSHSGWCAVDTSEAPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...AGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGCCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGACCTGGCTATGCAGCTaGAAGGCGGTGCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGTWLCS*KAVPSS
Trigger: AGAACTCGGCACCGCCTTCCAGCTGCATAGCCAGGT...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR CCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGAGGTTGCCTTGCATATaGGGCCCCAGGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWRLPCI*GPRCVS
Trigger: GGAAACACACCTGGGGCCCCATATGCAAGGCAACCT...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GATGAGACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACAAGGTTGCCTTGCATATaGGGCCCCAGGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: DETPTKYWGIRLKSSSPTRLPCI*GPRCVS
Trigger: GGAAACACACCTGGGGCCCCATATGCAAGGCAACCT...TGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCAGCCAATGAACACTaGCACCATCAGGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREAANEH*HHQVAL
Trigger: CAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTCTGAGTGGCAGCCCGTaGATGTGCAGCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTLSGSP*MCSRKV
Trigger: CACCTTCCTGCTGCACATCCACGGGCTGCCACTCAG...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTCTCCACCAGCAGCAGTAGAGTATACTCACCCGCGATGTATTCAGACCAAATTCCGCTTGGGACTGAGTaGCAGCCCGTGGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSTSSSRVYSPAMYSDQIPLGTE*QPVDVQ
Trigger: CTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGG...AATTTGGTCTGAATACATCGCGGGTGAGTATACTCTACTGCTGCTGGTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGTCGAGATTCCGGAAATaGAGGCGTAGGTGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVSRFRK*RRRCSR
Trigger: CCTACTACACCTACGCCTCCATTTCCGGAATCTCGA...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCATCTCCACGGCTTCCTTaGGTTCAGCCCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRRGRKCPGRESRASPGSSPRLP*VQPCPL
Trigger: CAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGA...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTACAGTAACTGGGGGCTaGGGCAGGTGGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTTVTGG*GRWDTQ
Trigger: CTGAGTGTCCCACCTGCCCCAGCCCCCAGTTACTGT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCAAGAGAGGCCTGGGCTaGGTGACAGGTTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGKRGLG*VTGCIF
Trigger: GAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAAAGTTGACTGGGGACTaGAAGGTGACCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRKLTGD*KVTSTR
Trigger: CCTGGTGCTGGTCACCTTCCAGTCCCCAGTCAACTT...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCGCGGTAGAAGTTGACTaGGGACTGGAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGAVEVD*GLEGDQ
Trigger: CTGGTCACCTTCCAGTCCCCAGTCAACTTCTACCGC...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCACAACCGTTGATATTCATCTaGAACCTTTGCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AQVTGPQCATRASMRHPQPLIFI*NLCCGR
Trigger: CCTTCCGCAGCAAAGGTTCCAGATGAATATCAACGG...TTGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475343.6
CDS-3UTR TCA 90 bp GTCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGATTCCTGGAAATCCTTaGTCGCCCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VSHQDVLLIGNASQDKHRIPGNP*SPTAST
Trigger: CGTGGAGGCTGTGGGCGATCAAGGATTTCCAGGAAT...CCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGAGTCCACCAGCATGTaGAACAAGCTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWESTSM*NKLLTV
Trigger: CACAGTGAGCAGCTTGTTTCACATGCTGGTGGACTC...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGAAGCCGTCCAGCGGTAGAAGTTaGCTGGGGACTTTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SSPTVNWMLLSRSLFRKPSSGRS*LGTFPR
Trigger: GCGAGGAAAAGTCCCCAGTCAACTTCTACCGCTGGA...CGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475343.6
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGACCTTTTATCTGGAATaGAGGTCCCCAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIRETFYLE*RSPGHC
Trigger: GCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGT...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGCAGGATAAGCACAGGTaGCTGGTCCACAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGQDKHR*LVHSVP
Trigger: TGGCACACTGTGGACCAGTCACCTGTGCTTATCCTG...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTACGAGAGAGAAGTCCTTaGAGCTGGTGTCAGTCATCA +
Preference number: 4 (lower is better)
Translates to: HFYGHAARASPIARQEEVRERSP*SWCQSS
Trigger: TGATGACTGACACCAGCTTCAAGGACTTCTCTCTCG...TACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCCGGCATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RKMAKLYSVPLSRKMRSGIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...GCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGCATCAGCTTTAAGCTaGTGTGCACCTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGASALS*CAPASP
Trigger: AGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGRGRSR*RRASSS
Trigger: GCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCGGCGGTGCCGAGTTCTaGCTGCGTCCGGAACGAGTG +
Preference number: 4 (lower is better)
Translates to: LSLSVIENSTELRLIRTSGGAEF*LRPERV
Trigger: CACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCC...GGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCGAAGTCTCCATAAGGTaGTGTCCACTAATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGEVSIR*CPLMPW
Trigger: CCAAGGCATTAGTGGACATCACCTTATGGAGACTTC...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGATGGTCCCGAAGTGTGAAGTCTCCATAAGGTaGTGTCCACTAATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: CLGSISKDTWPSLMVPKCEVSIR*CPLMPW
Trigger: CCAAGGCATTAGTGGACATCACCTTATGGAGACTTC...ACACTTCGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CTCCGGGTTCACGTTAACGCAGTCAAAGTAGTGTTTGTTCTTCAGGCGGCTGTAATTCCAGCGTGTAGGTaGTGTCGAAGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LRVHVNAVKVVFVLQAAVIPACR*CRRPGA
Trigger: AGCGCCTGGCCTTCGACATCACCTACACGCTGGAAT...TACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTATTCCAGCGTGTAGGTaGTGTCGAAGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTIPACR*CRRPGA
Trigger: AGCGCCTGGCCTTCGACATCACCTACACGCTGGAAT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GTGCTGTTGATACATCAGAAGCTGCTCCACGGGCACGAGCCTCTTGACCAGCTGCATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VLLIHQKLLHGHEPLDQLHDVKG*VFGGPC
Trigger: ACAAGGACCACCAAAGACTCAGCCTTTCACATCATG...CAGCTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCTGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGCSPTP*RRIQGQ
Trigger: TTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCA...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCACAGGAGGCAGGTGTAGTAGGATTCTaGGGCAATGAGGTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: YLPPDHRAALHHEGPQEAGVVGF*GNEVVY
Trigger: ATAAACAACCTCATTGCCTCAGAATCCTACTACACC...TGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp ATTGTCATAGCATGGGGCATTCTCCAGACAGAGCCACTCGATGCCTGGGCTCTCTCGTTCAGGACAACCTaGCAGGTGCATTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: IVIAWGILQTEPLDAWALSFRTT*QVHSWK
Trigger: TTTCCAGGAATGCACCTGGCAGGTTGTCCTGAACGA...GAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp CAGGCCATTGCTGCTGATGTCCACACGCATGACCACACTGCCTTTCTTGATGGGTCGTTCAGGACAACCTaGCAGGTGCATTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QAIAADVHTHDHTAFLDGSFRTT*QVHSWK
Trigger: TTTCCAGGAATGCACCTGGCAGGTTGTCCTGAACGA...CCCATCAAGAAAGGCAGTGTGGTCATGCGTGTGGACATCAGCAGCAATGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGTGTCCACGGGCTCTTaGTCAAAGAAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGVSTGS*SKKLSL
Trigger: GAGCGACAGCTTCTTTGAGCAAGAGCCCGTGGACAC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCGTGTCCACGGGCTCTTaGTCAAAGAAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: VLEAGVSHQDVLLIGNASVSTGS*SKKLSL
Trigger: GAGCGACAGCTTCTTTGAGCAAGAGCCCGTGGACAC...GGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR GCA 90 bp CGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCATTTCGCCTCCATCTGGATCTaGAGCTGCTCTATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RQLVRGLEVVDLFVAVHFASIWI*SCSIFQ
Trigger: CTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGC...GAAATGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCGCCTCCATCTGGATCTaGAGCTGCTCTATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGASIWI*SCSIFQ
Trigger: CTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGC...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGCCTCCATCTGGATCTaGAGCTGCTCTATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWASIWI*SCSIFQ
Trigger: CTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGC...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGACACTTCTTCTGCCATaGATGGCTCTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIRETLLLP*MALCCG
Trigger: TCCGCAGCAAAGAGCCATGCATGGCAGAAGAAGTGT...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTAGTAATCGCGTGTACCAGCTCATaGTACACACTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: YGHAARASPIARQEEVVIACTSS*YTLLLP
Trigger: TGGCAGAAGAAGTGTGTAGCATGAGCTGGTACACGC...GATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGTACCAGCTCATaGTACACACTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREACTSS*YTLLLP
Trigger: TGGCAGAAGAAGTGTGTAGCATGAGCTGGTACACGC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTDWSTV*HKGLDE
Trigger: CTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGACTGGTCCACAGTGTaGCACAAGGGCCTCGATGAG +
Preference number: 4 (lower is better)
Translates to: EELLSHSELDVIVPVSLQDWSTV*HKGLDE
Trigger: CTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTC...CTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGTCCTTGTTAGAGCTCTaGAGGAGGAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWSLLEL*RRKLPQ
Trigger: CTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGA...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CTTGTCCAGGGGGCTGTTGAAGCGGTAGATTTCGTCCTCACTGTAGTCCTTGAGTCCTTGTTAGAGCTCTaGAGGAGGAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVQGAVEAVDFVLTVVLESLLEL*RRKLPQ
Trigger: CTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGA...CTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TCGCACACAGACCACTGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SHTDHCLGSISKDTWPSLFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...CAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CCCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PLSAPSHSGWCAVDTSEAKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...AGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGCCAGCTGGTACAGTTTaGTGTCTTCGTAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREPAGTV*CLRRRG
Trigger: CCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGG...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGAAGTACGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: HFYGHAARASPIARQEEVRSCTQ*PCPGKC
Trigger: GCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCG...TACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGTTAATCAGGACCTCCTaGTTCACCGAGGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWLIRTS*FTEASM
Trigger: CATCGAGGCCTCGGTGAAGCAGGAGGTCCTGATTAA...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTTTAATCAGGACCTCCTaGTTCACCGAGGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: QQEGELVVAVGARVHSSILIRTS*FTEASM
Trigger: CATCGAGGCCTCGGTGAAGCAGGAGGTCCTGATTAA...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp CTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGATTCAGGGGCAAAGATaGCTTGGGGAACATTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSISMDTPPALRQLLAKKIQGQR*LGEHCH
Trigger: ATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAAT...CTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGATTCAGGGGCAAAGATaGCTTGGGGAACATTGTCAT +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAIQGQR*LGEHCH
Trigger: ATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAAT...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CGACAGGAAGATGGCGAAGCTGTACTCAGTGCCCTTGTCCAGGAAAATGCGCTCGGTAGTTGCAGTAGGTaGTCGTGTCCACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RQEDGEAVLSALVQENALGSCSR*SCPLLY
Trigger: ATAGAGGAGTGGACACGAGCACCTACTGCAACTACC...GAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATCTTCCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGGTAGTTGCAGTAGGTaGTCGTGTCCACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREGSCSR*SCPLLY
Trigger: ATAGAGGAGTGGACACGAGCACCTACTGCAACTACC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp AAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACCACCTGGAAACGTTTACTGGCAGCCCGTGGATGTaGAGCAGGAAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KFQVITSCVVADHLETFTGSPWM*SRKVSW
Trigger: CCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCC...AGTAAACGTTTCCAGGTGGTCAGCTACAACACAGCTAGTGATGACCTGGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGTCTCAGAGACGGCATaGTCGAGATTCCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRVSETA*SRFRKW
Trigger: CCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGAC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGTCTCAGAGACGGCATaGTCGAGATTCCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWVSETA*SRFRKW
Trigger: CCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGAC...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCAAGTCATAGGCTGGGTGACAGGTTaGATCTTCAAGATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEVDEGEHQVAPFPLQVIGWVTG*IFKMGL
Trigger: GAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCC...TATGACTTGGAGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCCCAGCAACTGTCAATaGTCAGCTCCACGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWPSNCQ*SAPRER
Trigger: TCTCTCTCGTGGAGCTGAGCATTGACAGTTGCTGGG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCCCCAGCAACTGTCAATaGTCAGCTCCACGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGPSNCQ*SAPRER
Trigger: TCTCTCTCGTGGAGCTGAGCATTGACAGTTGCTGGG...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409235.8
ENST00000410018.5
CDS-3UTR CCA 90 bp GATGAGACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACATGCCAGGTGCATTCCTaGAAATCCTTGATCGCCCAC +
Preference number: 4 (lower is better)
Translates to: DETPTKYWGIRLKSSSPTCQVHS*KSLIAH
Trigger: GTGGGCGATCAAGGATTTCCAGGAATGCACCTGGCA...TGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGTCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR CCA 90 bp AAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGTCTCGCTCGGGTCGATaGGTGAGTCCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: KSSSPTVNWMLLSRSLFRSRSGR*VSPPAC
Trigger: ACATGCTGGTGGACTCACCCATCGACCCGAGCGAGA...CCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREISTGD*STVCHK
Trigger: CTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTGACTGGTCCACAGTGTGCCACAAGGGCCTCGATGAGACACCCACAAAGTACTATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: VTGPQCATRASMRHPQSTISTGD*STVCHK
Trigger: CTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT...AGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR CCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCATTCTCTCATAGAGTGTaGTATAGGTGCCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPFSHRV*YRCLHE
Trigger: CTCGTGGAGGCACCTATACCACACTCTATGAGAGAA...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312265.9
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAACACAGACCACTGCCTaGGCAGCATCTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRTQTTA*AASQRT
Trigger: TGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGT...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTACACAGACCACTGCCTaGGCAGCATCTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: QQEGELVVAVGARVHSSITQTTA*AASQRT
Trigger: TGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGT...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGGPLQC*CRTLSL
Trigger: TAGGGACAGAGTCCTACACCAGCACTGCAATGGCCC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: SETACSRFRKWRRRCSRIGPLQC*CRTLSL
Trigger: TAGGGACAGAGTCCTACACCAGCACTGCAATGGCCC...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTACAGAAGATGCCCTTaGGGGCCATTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGYRRCP*GPLQCW
Trigger: CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGCACCTGCCAGCCCTTaGAAGGGAACAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTAPASP*KGTAGR
Trigger: TCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp ACACTGGCACCATCAGGTTGCCTTGCATATGGGGCCCCAGGTGTGTTTCCTGGATCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: TLAPSGCLAYGAPGVFPGSAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...TCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGAGCCTCTTGACCAGCTaGCCCTTCTGGTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIRESLLTS*PFWLFI
Trigger: TATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCT...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TGCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTTGAATCAAGAAGAAGGCCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: CPGNCRSLLSPNLESRRRPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...CCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTCCAGGCCCTGGTAGATaGCGAGCGAGTTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTPGPGR*RASSRC
Trigger: ACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGG...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCAAGGCTGAGTCTTTGGTaGTCCTTGTGGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RRRGRKCPGRESRASPGSRLSLW*SLWSSW
Trigger: CCACGAGGACCACAAGGACCACCAAAGACTCAGCCT...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGAGCCACTCGATGCCTaGGCTCTCGTGGGACATGAT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTEPLDA*ALVGHD
Trigger: ATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGAATGCCTCCCAGGATAAGCACAGGTGACTGGTCCACAGTGTGCCACAAGGGCAACATTGTCATAGCATaGGGCATTCTCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: GMPPRISTGDWSTVCHKGNIVIA*GILQTE
Trigger: CTCTGTCTGGAGAATGCCCCATGCTATGACAATGTT...GCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCACATGGAGCCCATCCTaGAATGTCTCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGTWSPS*NVSETA
Trigger: TGCCGTCTCTGAGACATTCCAGGATGGGCTCCATGT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTGGGGAAGTCTGCCAGGTAGATGAAGTTTTCCTTGTTAGAGCTCTGCAGGAGCCCGTCTTCGATGCCTaGGCTCTCGTGGGACATGAT +
Preference number: 4 (lower is better)
Translates to: LGEVCQVDEVFLVRALQEPVFDA*ALVGHD
Trigger: ATCATGTCCCACGAGAGCCCAGGCATCGAAGACGGG...CTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTACCTGGCAGACTTCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412458.6
3UTR CAA 72 bp TGGAACCTTTTATCTGGAATGAAGGTCCCCAGGCCATaGCTGCTGATGTCCACACGCATGACCACACTGCCT +
Preference number: 4 (lower is better)
Translates to: WNLLSGMKVPRP*LLMSTRMTTLP
Trigger: AGGCAGTGTGGTCATGCGTGTGGACATCAGCAGCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CAA 72 bp GAGCCATTGCTATGGAAATACACAGGGCACAGCTTCTaGATGCACTCGCTGGCCAGGACACGAATCCAACTG +
Preference number: 4 (lower is better)
Translates to: EPLLWKYTGHSF*MHSLARTRIQL
Trigger: CAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTGTATTTCCATAGCAATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTGGGGAAGTCTGCCAGGTAGATGAAGTTTTCCTTGTTAGAGCTCTGCAGGAGATTCCTGGAAATCCTTaGTCGCCCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: LGEVCQVDEVFLVRALQEIPGNP*SPTAST
Trigger: CGTGGAGGCTGTGGGCGATCAAGGATTTCCAGGAAT...CTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTACCTGGCAGACTTCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR TCA 90 bp GTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTGCTCGGGTCGATGGGTaGGTCCACCAGCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: VEELLSHSELDVIVPVSLARVDG*VHQHVK
Trigger: TTTCACATGCTGGTGGACTCACCCATCGACCCGAGC...AAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGACCTCGCAGGAGTAGTTaGTCTTCAGGTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRPRRSS*SSGSKG
Trigger: TCCCTTACTACCTGAAGATCAACTACTCCTGCGAGG...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCCTCGCAGGAGTAGTTaGTCTTCAGGTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWPRRSS*SSGSKG
Trigger: TCCCTTACTACCTGAAGATCAACTACTCCTGCGAGG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTACTGGGGCATCAGGTTaGAGAGCTCCTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: VEELLSHSELDVIVPVSLTGASG*RAPLPQ
Trigger: CTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGT...AAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCTCGAGCTTCAGGGATaGATTCTGGGATGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWLELQG*ILGCGR
Trigger: TCTACCACATCCCAGAATTCATCCCTGAAGCTCGAG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGGAAGTTGCCCCAGATaGAGATCAGATTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREGSCPR*RSDCCT
Trigger: CGTACAACAATCTGATCTTCATCTGGGGCAACTTCC...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTGGCTGGTGTGCTGTTaGTACATCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGWLVCC*YIRSCS
Trigger: GGAGCAGCTTCTGATGTATCAACAGCACACCAGCCA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCATGAACCCACCACATTaGCCGTCATGGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGMNPPH*PSWKSP
Trigger: TGGAGACTTCCATGACGGTCAATGTGGTGGGTTCAT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GATGTATTCAGACCAAATTATGGAGCAGGTGGTAACTCCTATCTGCTCGCACACCCTCACTGTAGTCCTTaGGGCTGTCCAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DVFRPNYGAGGNSYLLAHPHCSP*GCPVWA
Trigger: GGCCCACACTGGACAGCCTCAAGGACTACAGTGAGG...GTGTGCGAGCAGATAGGAGTTACCACCTGCTCCATAATTTGGTCTGAATACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTTGTCCAGGGGGCTGTTaGAGCGGTAGATTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTCPGGC*SGRFRP
Trigger: AGGACGAAATCTACCGCTTCAACAGCCCCCTGGACA...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGATCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRSWDMM*KAESLV
Trigger: CACCAAAGACTCAGCCTTTCACATCATGTCCCACGA...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGATTCTGAGGCAATaGGGTTGTTTATCTTCCACC +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGRILRQ*GCLSST
Trigger: GGTGGAAGATAAACAACCTCATTGCCTCAGAATCCT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGGGTGTAGTAGGATTCTaGGGCAATGAGGTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAGVVGF*GNEVVY
Trigger: ATAAACAACCTCATTGCCTCAGAATCCTACTACACC...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTCGTTCAGGACAACCTaGCAGGTGCATTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGSFRTT*QVHSWK
Trigger: TTTCCAGGAATGCACCTGGCAGGTTGTCCTGAACGA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGATCGTTCAGGACAACCTaGCAGGTGCATTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRSFRTT*QVHSWK
Trigger: TTTCCAGGAATGCACCTGGCAGGTTGTCCTGAACGA...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGTGTCCACGGGCTCTTaGTCAAAGAAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTVSTGS*SKKLSL
Trigger: GAGCGACAGCTTCTTTGAGCAAGAGCCCGTGGACAC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGAAGAAGGGGTAGAAAATGTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCAGCATGTGAAACAAGCTaGTCACTGTGTCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RRRGRKCPGRESRASPGSACETS*SLCPRA
Trigger: AGCCCGTGGACACAGTGAGCAGCTTGTTTCACATGC...TGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGCATGTGAAACAAGCTaGTCACTGTGTCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGACETS*SLCPRA
Trigger: AGCCCGTGGACACAGTGAGCAGCTTGTTTCACATGC...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGAAGCCGGCATGTGAAACAAGCTaGTCACTGTGTCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: SSPTVNWMLLSRSLFRKPACETS*SLCPRA
Trigger: AGCCCGTGGACACAGTGAGCAGCTTGTTTCACATGC...CGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR GCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGCGTGTACCAGCTCATaGTACACACTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRACTSS*YTLLLP
Trigger: TGGCAGAAGAAGTGTGTAGCATGAGCTGGTACACGC...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTACGGGTTACAGAAGATaGCCTTGGGGGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTTGYRR*PWGPLQ
Trigger: CTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GTCTCTGTGACAATAGCCACAGCCCCACGGAACGATCTGGCCATGTATTTGATGTCCTTGTTAGAGCTCTaGAGGAGGAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSVTIATAPRNDLAMYLMSLLEL*RRKLPQ
Trigger: CTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGA...CATCAAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TGCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTTGAATCAAGAAGAAGGAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CPGNCRSLLSPNLESRRRKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...CCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCAGCTTTAAGCTGATGTaGACCTGCCAGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGSFKLM*TCQPLE
Trigger: TTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCATTTCCCAGCTGGTACAGTTTaGTGTCTTCGTAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RQLVRGLEVVDLFVAVHFPAGTV*CLRRRG
Trigger: CCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGG...GAAATGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TGCCTGGGCAGCATCTCAAAGGACACCTGGCCATCTCTGATGGTCCCGAAGTGTATTCAGGGGCAAAGATaGCTTGGGGAACATTGTCAT +
Preference number: 4 (lower is better)
Translates to: CLGSISKDTWPSLMVPKCIQGQR*LGEHCH
Trigger: ATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAAT...ACACTTCGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCATTTCGGTAGTTGCAGTAGGTaGTCGTGTCCACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RQLVRGLEVVDLFVAVHFGSCSR*SCPLLY
Trigger: ATAGAGGAGTGGACACGAGCACCTACTGCAACTACC...GAAATGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR GCA 90 bp GAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGTTCATCTGGAACCTTTaGTGCGGAAGGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EELLSHSELDVIVPVSLQFIWNL*CGRGQP
Trigger: AGGCTGCCCCCTTCCGCAGCAAAGGTTCCAGATGAA...CTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475343.6
CDS-3UTR CCA 90 bp CCTTGTCCAGGAAAATGCGCTCCGGCAGCTCGTACGCGGACTCGAGGTTGTAGACTAGAACCAGTCACTTaGTTAAAACCGGTCAACTGT +
Preference number: 4 (lower is better)
Translates to: PCPGKCAPAARTRTRGCRLEPVT*LKPVNC
Trigger: ACAGTTGACCGGTTTTAACCAAGTGACTGGTTCTAG...TCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTTCTTCTGCCATGCATaGCTCTTTGCTGCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGFFCHA*LFAAEG
Trigger: CCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCTGGAACCTTTTATCTaGAATGAAGGTCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWLEPFI*NEGPQA
Trigger: GGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCAG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGATAAGCACAGGTGACTaGTCCACAGTGTGCCACAAG +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWISTGD*STVCHK
Trigger: CTTGTGGCACACTGTGGACCAGTCACCTGTGCTTAT...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TGCATCAGCTTTAAGCTGATGTGCACCTGCCAGCCCTTGGAAGGGAACAGCTGGTCAGAGCCATTGCTATaGAAATACACAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: CISFKLMCTCQPLEGNSWSEPLL*KYTGHS
Trigger: GCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGA...CCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAGGTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LQDGPHKRGVTVTGGWGRFRDEF*DVVEKF
Trigger: GAACTTCTCTACCACATCCCAGAATTCATCCCTGAA...CCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTGTCCATTTCTATGGACACGCCGCCCGCGCTTCGCCAATTGCTCGCCAAGAAGTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSISMDTPPALRQLLAKKFRDEF*DVVEKF
Trigger: GAACTTCTCTACCACATCCCAGAATTCATCCCTGAA...CTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGAAGGGAACAGCTGGTAGACCCGGTAGCTGCCCTCCAGGAGGTACCAGATCTTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: WKGTAGRPGSCPPGGTRSFRDEF*DVVEKF
Trigger: GAACTTCTCTACCACATCCCAGAATTCATCCCTGAA...AGATCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTTACAGAAGATGCCCTTaGGGGCCATTGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTYRRCP*GPLQCW
Trigger: CCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTA...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CTCTCCACCAGCAGCAGTAGAGTATACTCACCCGCGATGTATTCAGACCAAATTGCACCTGCCAGCCCTTaGAAGGGAACAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LSTSSSRVYSPAMYSDQIAPASP*KGTAGR
Trigger: TCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGC...AATTTGGTCTGAATACATCGCGGGTGAGTATACTCTACTGCTGCTGGTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCACCAGCTGGCCCTTCTaGTTGTTCATAAGGTACACC +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGTSWPF*LFIRYT
Trigger: GGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GAGGTTGTTTATCTTCCACCGGATCATCGTGCAGCCCTTCACCACGAGGGGCCACCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 4 (lower is better)
Translates to: EVVYLPPDHRAALHHEGPPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp ATGAAGATCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGCGCCGACAGGAAGATaGCGAAGCTGTACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MKIRLLYGLQKMPLGAIAAPTGR*RSCTQC
Trigger: GCACTGAGTACAGCTTCGCCATCTTCCTGTCGGCGC...TGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGATCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCACGCCCACGTCCACCTaGCTATGCAGCTGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LSLSVIENSTELRLIRTSTPTST*LCSWKA
Trigger: CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGT...GGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTAGGTTGCCTTGCATATaGGGCCCCAGGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTRLPCI*GPRCVS
Trigger: GGAAACACACCTGGGGCCCCATATGCAAGGCAACCT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTGAGCCACTCGATGCCTaGGCTCTCGTGGGACATGAT +
Preference number: 4 (lower is better)
Translates to: VEELLSHSELDVIVPVSLEPLDA*ALVGHD
Trigger: ATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTC...AAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGAACATTGTCATAGCATaGGGCATTCTCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVNIVIA*GILQTE
Trigger: CTCTGTCTGGAGAATGCCCCATGCTATGACAATGTT...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCAACATTGTCATAGCATaGGGCATTCTCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGNIVIA*GILQTE
Trigger: CTCTGTCTGGAGAATGCCCCATGCTATGACAATGTT...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGACATGGAGCCCATCCTaGAATGTCTCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGTWSPS*NVSETA
Trigger: TGCCGTCTCTGAGACATTCCAGGATGGGCTCCATGT...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTAAGAGAGGCCTGGGCTaGGTGACAGGTTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTKRGLG*VTGCIF
Trigger: GAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGAGTCCACCAGCATGTaGAACAAGCTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTESTSM*NKLLTV
Trigger: CACAGTGAGCAGCTTGTTTCACATGCTGGTGGACTC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGAGTCCACCAGCATGTaGAACAAGCTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: EELLSHSELDVIVPVSLQESTSM*NKLLTV
Trigger: CACAGTGAGCAGCTTGTTTCACATGCTGGTGGACTC...CTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp ACGAGAGAGAAGTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATTGCCACAAGGGCCTCGATaGGACACCCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: TREKSLKLVSVIRTYFSLPQGPR*DTHKVL
Trigger: CAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGG...CAATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp AGAGAGAAGTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATTGGGACAGGATAAGCACAGGTaGCTGGTCCACAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: REKSLKLVSVIRTYFSLGQDKHR*LVHSVP
Trigger: TGGCACACTGTGGACCAGTCACCTGTGCTTATCCTG...TCCCAATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTACACCTGGCCATCTCTaGTGGTCCCGAAGTGTACAT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTTPGHL*WSRSVH
Trigger: ATGTACACTTCGGGACCATCAGAGATGGCCAGGTGT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CAGGTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTACACCTGGCCATCTCTaGTGGTCCCGAAGTGTACAT +
Preference number: 4 (lower is better)
Translates to: QVEELLSHSELDVIVPVSTPGHL*WSRSVH
Trigger: ATGTACACTTCGGGACCATCAGAGATGGCCAGGTGT...AGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TGCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTTGAATCAAGAAGAAGGTGGCTGGTGTGCTGTTaGTACATCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CPGNCRSLLSPNLESRRRWLVCC*YIRSCS
Trigger: GGAGCAGCTTCTGATGTATCAACAGCACACCAGCCA...CCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGAGGGGCAGAAGTCGATaGAGGAGAGCATCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSRGRSR*RRASSS
Trigger: GCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCT...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GTCCCGGAAGAGAAAGCAGGGCATCTCCGGGTTCACGTTAACGCAGTCAAAGTAGAAGTCTCCATAAGGTaGTGTCCACTAATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VPEEKAGHLRVHVNAVKVEVSIR*CPLMPW
Trigger: CCAAGGCATTAGTGGACATCACCTTATGGAGACTTC...TACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGATGAACCCACCACATTaGCCGTCATGGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGMNPPH*PSWKSP
Trigger: TGGAGACTTCCATGACGGTCAATGTGGTGGGTTCAT...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTGCTTCGAAGCAGAGCCCGGATaGACCCACCACATTGACCGT +
Preference number: 4 (lower is better)
Translates to: LSVIENSTELRLIRTSCFEAEPG*THHIDR
Trigger: ACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTC...GAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGCSPTP*RRIQGQ
Trigger: TTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTCTCCACCAGCAGCAGTAGAGTATACTCACCCGCGATGTATTCAGACCAAATTTGTGCAGCAGGAAGGTaGGCTGGTAGTTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSTSSSRVYSPAMYSDQICAAGR*AGSCSR
Trigger: CCTACTGCAACTACCAGCTCACCTTCCTGCTGCACA...AATTTGGTCTGAATACATCGCGGGTGAGTATACTCTACTGCTGCTGGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGGGCGGTGTAGTAGGATTCTaGGGCAATGAGGTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: HLQDGPHKRGVTVTGGWGGVVGF*GNEVVY
Trigger: ATAAACAACCTCATTGCCTCAGAATCCTACTACACC...GCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGGGTGTAGTAGGATTCTaGGGCAATGAGGTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: PGLGDRLHLQDGPHKRGVGVVGF*GNEVVY
Trigger: ATAAACAACCTCATTGCCTCAGAATCCTACTACACC...CACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp ACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACAGTGAATTCGTTCAGGACAACCTaGCAGGTGCATTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TPTKYWGIRLKSSSPTVNSFRTT*QVHSWK
Trigger: TTTCCAGGAATGCACCTGGCAGGTTGTCCTGAACGA...ATTCACTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR GCA 90 bp CTCTCCACCAGCAGCAGTAGAGTATACTCACCCGCGATGTATTCAGACCAAATTGTGTCCACGGGCTCTTaGTCAAAGAAGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: LSTSSSRVYSPAMYSDQIVSTGS*SKKLSL
Trigger: GAGCGACAGCTTCTTTGAGCAAGAGCCCGTGGACAC...AATTTGGTCTGAATACATCGCGGGTGAGTATACTCTACTGCTGCTGGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGGCATGTGAAACAAGCTaGTCACTGTGTCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSACETS*SLCPRA
Trigger: AGCCCGTGGACACAGTGAGCAGCTTGTTTCACATGC...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGTGCCTCCATCTGGATCTaGAGCTGCTCTATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVIRTYFSLGMPPRISTGASIWI*SCSIFQ
Trigger: CTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGC...ACCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGACACTTCTTCTGCCATaGATGGCTCTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGTLLLP*MALCCG
Trigger: TCCGCAGCAAAGAGCCATGCATGGCAGAAGAAGTGT...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TGCATCAGCTTTAAGCTGATGTGCACCTGCCAGCCCTTGGAAGGGAACAGCTGGTGTACTCAGAGCCATTaGTATGGAAATACACAGGGC +
Preference number: 4 (lower is better)
Translates to: CISFKLMCTCQPLEGNSWCTQSH*YGNTQG
Trigger: GCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACA...CCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTCCGCGCTTCGCCAATTaGTCGCCAAGAAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTPRFAN*SPRRSS
Trigger: ACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGG...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGCGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGRSCTQ*PCPGKC
Trigger: GCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCG...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTTTAATCAGGACCTCCTaGTTCACCGAGGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTLIRTS*FTEASM
Trigger: CATCGAGGCCTCGGTGAAGCAGGAGGTCCTGATTAA...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGATTCAGGGGCAAAGATaGCTTGGGGAACATTGTCAT +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREIQGQR*LGEHCH
Trigger: ATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAAT...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGTCTCAGAGACGGCATaGTCGAGATTCCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTVSETA*SRFRKW
Trigger: CCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGAC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp CAGGTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTGTCTCAGAGACGGCATaGTCGAGATTCCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: QVEELLSHSELDVIVPVSVSETA*SRFRKW
Trigger: CCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGAC...AGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp GCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCAAGTCATACTGGAACCTTTTATCTaGAATGAAGGTCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AEVDEGEHQVAPFPLQVILEPFI*NEGPQA
Trigger: GGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCAG...TATGACTTGGAGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTATCTCAAAGGACACCTaGCCATCTCTGATGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTISKDT*PSLMVP
Trigger: CGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGAT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGSAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAAGAAGAGGGTCAGCATaGTCTCATTGGATGCGTAGA +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRRRGSA*SHWMRR
Trigger: TCTACGCATCCAATGAGACCATGCTGACCCTCTTCT...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GATGAGACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACAAGAAGAGGGTCAGCATaGTCTCATTGGATGCGTAGA +
Preference number: 4 (lower is better)
Translates to: DETPTKYWGIRLKSSSPTRRGSA*SHWMRR
Trigger: TCTACGCATCCAATGAGACCATGCTGACCCTCTTCT...TGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGTCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGATAAGGTACACCAGCTaGTACAGTTTGCTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREIRYTS*YSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTAT...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACAGGCTGAGTCTTTGGTaGTCCTTGTGGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FWDVVEKFQVITSCVVADRLSLW*SLWSSW
Trigger: CCACGAGGACCACAAGGACCACCAAAGACTCAGCCT...GTCAGCTACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGAAAGGCTGAGTCTTTaGTGGTCCTTGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTERLSL*WSLWSS
Trigger: CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
3UTR CAA 72 bp GTGCTCGTGTCCACTCCTCTATTGCTCACCAACACCTaGAAGAAGAATTCAGGGGCAAAGATGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VLVSTPLLLTNT*KKNSGAKMPWG
Trigger: TCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
3UTR CAA 72 bp TTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATaGGGAATGCCTCCCAGGATAAGCACAGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LKLVSVIRTYFS*GMPPRISTGDW
Trigger: CCAGTCACCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
3UTR CAA 72 bp GACACGAATCCAACTGCCTCCACGAGAGAGAAGTCCTaGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: DTNPTASTREKS*KLVSVIRTYFS
Trigger: TGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGTGGAGGCAGTTGGATTCGTGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CAA 72 bp TCCACTCCTCTGGCTCACCTATTGCTCACCAACACCTaGAAGAAGAATTCAGGGGCAAAGATGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: STPLAHLLLTNT*KKNSGAKMPWG
Trigger: TCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGGTGAGCCAGAGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTCCTCGCAGGAGTAGTTaGTCTTCAGGTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTPRRSS*SSGSKG
Trigger: TCCCTTACTACCTGAAGATCAACTACTCCTGCGAGG...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTACCTTTTATCTGGAATaGAGGTCCCCAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTTFYLE*RSPGHC
Trigger: GCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACCACCTGGAAACGTTTACTCCACAAGGGCCTCGATaGGACACCCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: KFQVITSCVVADHLETFTPQGPR*DTHKVL
Trigger: CAGTACTTTGTGGGTGTCTCATCGAGGCCCTTGTGG...AGTAAACGTTTCCAGGTGGTCAGCTACAACACAGCTAGTGATGACCTGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGCGAGAGAGAAGTCCTTaGAGCTGGTGTCAGTCATCA +
Preference number: 4 (lower is better)
Translates to: EELLSHSELDVIVPVSLQRERSP*SWCQSS
Trigger: TGATGACTGACACCAGCTTCAAGGACTTCTCTCTCG...CTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp GCTGGTACAGTTTGCTGTCTTCGTAGAAGAGGGTCAGCATGGTCTCATTGGATGCTCGAGCTTCAGGGATaGATTCTGGGATGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: AGTVCCLRRRGSAWSHWMLELQG*ILGCGR
Trigger: TCTACCACATCCCAGAATTCATCCCTGAAGCTCGAG...CATCCAATGAGACCATGCTGACCCTCTTCTACGAAGACAGCAAACTGTACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TCAGTCATCAGGACGTACTTCTCATTGGGAATGCCTCCCAGGATAAGCACAGGTCTCGAGCTTCAGGGATaGATTCTGGGATGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SVIRTYFSLGMPPRISTGLELQG*ILGCGR
Trigger: TCTACCACATCCCAGAATTCATCCCTGAAGCTCGAG...ACCTGTGCTTATCCTGGGAGGCATTCCCAATGAGAAGTACGTCCTGATGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGCATGATGTGAAAGGCTaGGTCTTTGGTGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGHDVKG*VFGGPC
Trigger: ACAAGGACCACCAAAGACTCAGCCTTTCACATCATG...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp CTTGGGGAAGTCTGCCAGGTAGATGAAGTTTTCCTTGTTAGAGCTCTGCAGGAGTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LGEVCQVDEVFLVRALQESWDMM*KAESLV
Trigger: CACCAAAGACTCAGCCTTTCACATCATGTCCCACGA...CTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTACCTGGCAGACTTCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGTGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLCSPTP*RRIQGQ
Trigger: TTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCA...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CTCCGGGTTCACGTTAACGCAGTCAAAGTAGTGTTTGTTCTTCAGGCGGCTGTAGCGTGTACCAGCTCATaGTACACACTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRVHVNAVKVVFVLQAAVACTSS*YTLLLP
Trigger: TGGCAGAAGAAGTGTGTAGCATGAGCTGGTACACGC...TACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGAATCCAACTGCCACTaGCGCGGTTTCTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTESNCH*RGFSHR
Trigger: TCTATGAGAGAAACCGCGGCAGTGGCAGTTGGATTC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGTACTCAGAGCCATTaGTATGGAAATACACAGGGC +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGCTQSH*YGNTQG
Trigger: GCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACA...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGTTCCTTGGGGAAGTCTaGCAGGTAGATGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWFLGEV*QVDEVF
Trigger: GAAAACTTCATCTACCTGGCAGACTTCCCCAAGGAA...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GATGTATTCAGACCAAATTATGGAGCAGGTGGTAACTCCTATCTGCTCGCACACAAGCTGATGTGCACCTaGCAGCCCTTGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: DVFRPNYGAGGNSYLLAHKLMCT*QPLEGN
Trigger: GTTCCCTTCCAAGGGCTGGCAGGTGCACATCAGCTT...GTGTGCGAGCAGATAGGAGTTACCACCTGCTCCATAATTTGGTCTGAATACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTCCAGCTGGTACAGTTTaGTGTCTTCGTAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTPAGTV*CLRRRG
Trigger: CCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGG...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGTAGTTGCAGTAGGTaGTCGTGTCCACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTGSCSR*SCPLLY
Trigger: ATAGAGGAGTGGACACGAGCACCTACTGCAACTACC...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGCTAGAACCAGTCACTTaGTTAAAACCGGTCAACTGT +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIRELEPVT*LKPVNC
Trigger: ACAGTTGACCGGTTTTAACCAAGTGACTGGTTCTAG...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGCCGTTGATATTCATCTaGAACCTTTTATCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GLGWVTGCIFKMGLIREAPLIFI*NLLSGM
Trigger: CATTCCAGATAAAAGGTTCCAGATGAATATCAACGG...CGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGTCAGAGCCATTGCTATaGAAATACACAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: DRLHLQDGPHKRGVTVTGSEPLL*KYTGHS
Trigger: GCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGA...CCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp AGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGTTCAGGGATGAATTCTaGGATGTGGTAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RGLGWVTGCIFKMGLIREFRDEF*DVVEKF
Trigger: GAACTTCTCTACCACATCCCAGAATTCATCCCTGAA...CTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTGCTTCGGGCCATTGCAGTGCTaGTGTAGGACTCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LSVIENSTELRLIRTSCFGPLQC*CRTLSL
Trigger: TAGGGACAGAGTCCTACACCAGCACTGCAATGGCCC...GAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp ACACCCACAAAGTACTGGGGCATCAGGTTGAAGAGCTCCTCTCCCACAGTGAATTCAGCATGGTCTCATTaGATGCGTAGAGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: TPTKYWGIRLKSSSPTVNSAWSH*MRRERT
Trigger: AGTCCTCTCTCTACGCATCCAATGAGACCATGCTGA...ATTCACTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp CTCCGTCTCTGTGACAATAGCCACAGCCCCACGGAACGATCTGGCCATGTATTTATAAGGTACACCAGCTaGTACAGTTTGCTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LRLCDNSHSPTERSGHVFIRYTS*YSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTAT...AAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGACGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGACCAGCTGGCCCTTCTaGTTGTTCATAAGGTACACC +
Preference number: 4 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSTSWPF*LFIRYT
Trigger: GGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGT...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCTGGCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 4 (lower is better)
Translates to: LHLQDGPHKRGVTVTGGWPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...CCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CAGCAGGAAGGTGAGCTGGTAGTTGCAGTAGGTGCTCGTGTCCACTCCTCTATTCCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 4 (lower is better)
Translates to: QQEGELVVAVGARVHSSIPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...AATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000412458.6
CDS-3UTR CCA 90 bp ATGAAGATCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGAAAGGCTGAGTCTTTaGTGGTCCTTGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: MKIRLLYGLQKMPLGAIAERLSL*WSLWSS
Trigger: CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTC...TGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGATCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTTCGAGATTCCGGAAATaGAGGCGTAGGTGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTSRFRK*RRRCSR
Trigger: CCTACTACACCTACGCCTCCATTTCCGGAATCTCGA...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp GAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGTCGAGATTCCGGAAATaGAGGCGTAGGTGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: EELLSHSELDVIVPVSLQSRFRK*RRRCSR
Trigger: CCTACTACACCTACGCCTCCATTTCCGGAATCTCGA...CTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
3UTR CAA 72 bp GCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTaGAATCAAGAAGAAGGGGTAGAAAATGTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ALETAGVSCHQI*NQEEGVENVPE
Trigger: TTCCGGGACATTTTCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCCTCGCAGGAGTAGTTaGTCTTCAGGTAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: VEELLSHSELDVIVPVSLPRRSS*SSGSKG
Trigger: TCCCTTACTACCTGAAGATCAACTACTCCTGCGAGG...AAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGATCTTCAGGAAGCCGTTaGTATTCATCTGGAACCTTT +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRSSGSR*YSSGTF
Trigger: AAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGA...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR TCA 90 bp TGCCCTGGAAACTGCCGGAGTCTCCTGTCACCAAATCTTGAATCAAGAAGAAGGATCTGGCCATGTATTTaGTGGACAGTTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CPGNCRSLLSPNLESRRRIWPCI*WTVPWG
Trigger: TCCCCAAGGAACTGTCCATCAAATACATGGCCAGAT...CCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTGCTTCGCCTCCATCTGGATCTaGAGCTGCTCTATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSVIENSTELRLIRTSCFASIWI*SCSIFQ
Trigger: CTGGAAGATAGAGCAGCTGCAGATCCAGATGGAGGC...GAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp ATGAAGATCAGATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAACACTTCTTCTGCCATaGATGGCTCTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: MKIRLLYGLQKMPLGAIATLLLP*MALCCG
Trigger: TCCGCAGCAAAGAGCCATGCATGGCAGAAGAAGTGT...TGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGATCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CCCTTTCCGCTCCAAGTCATAGTGGCTGGTGTGCTGTTGATACATCAGAAGCTGTGTACTCAGAGCCATTaGTATGGAAATACACAGGGC +
Preference number: 4 (lower is better)
Translates to: PFPLQVIVAGVLLIHQKLCTQSH*YGNTQG
Trigger: GCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACA...CAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTCGCACACAGACCACTaGCTGGGCAGCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LSLSVIENSTELRLIRTSSHTDH*LGSISK
Trigger: CTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGA...GGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGCTTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGGCCCTTGGGGGCCATTaGAGTGCTGGTGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: SFLSLSVIENSTELRLIRALGGH*SAGVGL
Trigger: GAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGC...CCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp TTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACAGCTTTAAGCTGATGTaGACCTGCCAGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FWDVVEKFQVITSCVVADSFKLM*TCQPLE
Trigger: TTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCT...GTCAGCTACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CACGAGAGAGAAGTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATTAGCTTTAAGCTGATGTaGACCTGCCAGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HEREVLEAGVSHQDVLLISFKLM*TCQPLE
Trigger: TTCCAAGGGCTGGCAGGTGCACATCAGCTTAAAGCT...AATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp TTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACCGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: FWDVVEKFQVITSCVVADRSCTQ*PCPGKC
Trigger: GCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCG...GTCAGCTACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp CCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGAAGCCGTTGATACGAAGCTGTACTCAGTaGCCTTGTCCAGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: PTVNWMLLSRSLFRKPLIRSCTQ*PCPGKC
Trigger: GCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCG...TATCAACGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp GAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGTCAGAGCCATTGCTATaGAAATACACAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: EELLSHSELDVIVPVSLQSEPLL*KYTGHS
Trigger: GCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGA...CTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR CCA 90 bp TTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTGCTTCATCTCAAAGGACACCTaGCCATCTCTGATGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LSVIENSTELRLIRTSCFISKDT*PSLMVP
Trigger: CGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGAT...GAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GCAGAAGTCGATGAAGGAGAGCATCAAGTAGCCCCCTTTCCGCTCCAAGTCATACCAAGTCATAGTGGCTaGTGTGCTGTTGATACATCA +
Preference number: 4 (lower is better)
Translates to: AEVDEGEHQVAPFPLQVIPSHSG*CAVDTS
Trigger: TGATGTATCAACAGCACACCAGCCACTATGACTTGG...TATGACTTGGAGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTAACATTGTCATAGCATaGGGCATTCTCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SETACSRFRKWRRRCSRINIVIA*GILQTE
Trigger: CTCTGTCTGGAGAATGCCCCATGCTATGACAATGTT...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR CCA 90 bp GATGTATTCAGACCAAATTATGGAGCAGGTGGTAACTCCTATCTGCTCGCACACTCGTGTCCACTCCTCTaGCTCACCTATTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: DVFRPNYGAGGNSYLLAHSCPLL*LTYCSP
Trigger: TGGTGAGCAATAGGTGAGCCAGAGGAGTGGACACGA...GTGTGCGAGCAGATAGGAGTTACCACCTGCTCCATAATTTGGTCTGAATACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp GATGTATTCAGACCAAATTATGGAGCAGGTGGTAACTCCTATCTGCTCGCACACGCTCCTCTCCCACAGTaGATTGGATGTTATTGTCCC +
Preference number: 4 (lower is better)
Translates to: DVFRPNYGAGGNSYLLAHAPLPQ*IGCYCP
Trigger: GGGACAATAACATCCAATTCACTGTGGGAGAGGAGC...GTGTGCGAGCAGATAGGAGTTACCACCTGCTCCATAATTTGGTCTGAATACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp TTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTGCTTCCGAGAGAGAAGTCCTTaGAGCTGGTGTCAGTCATCA +
Preference number: 4 (lower is better)
Translates to: LSVIENSTELRLIRTSCFRERSP*SWCQSS
Trigger: TGATGACTGACACCAGCTTCAAGGACTTCTCTCTCG...GAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp CCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTCAGGAAGCCGTTGATAGGAAGTTGCCCCAGATaGAGATCAGATTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: PTVNWMLLSRSLFRKPLIGSCPR*RSDCCT
Trigger: CGTACAACAATCTGATCTTCATCTGGGGCAACTTCC...TATCAACGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp AAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACCACCTGGAAACGTTTACTTCGTGGGACATGATGTaGAAGGCTGAGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KFQVITSCVVADHLETFTSWDMM*KAESLV
Trigger: CACCAAAGACTCAGCCTTTCACATCATGTCCCACGA...AGTAAACGTTTCCAGGTGGTCAGCTACAACACAGCTAGTGATGACCTGGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTAGGATTCTGAGGCAATaGGGTTGTTTATCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTRILRQ*GCLSST
Trigger: GGTGGAAGATAAACAACCTCATTGCCTCAGAATCCT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTTGTACTCAGAGCCATTaGTATGGAAATACACAGGGC +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTCTQSH*YGNTQG
Trigger: GCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACA...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GATTGTTGTACGGGTTACAGAAGATGCCCTTGGGGGCCATTGCAGTGCTGGTGTCTGGAAACGTTTACTTaGATTACCATATCCACTCTC +
Preference number: 4 (lower is better)
Translates to: DCCTGYRRCPWGPLQCWCLETFT*ITISTL
Trigger: GAGAGTGGATATGGTAATGCAAGTAAACGTTTCCAG...ACACCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTGGGGGCCTGGAAACGTTTACTTaGATTACCATATCCACTCTC +
Preference number: 4 (lower is better)
Translates to: RLHLQDGPHKRGVTVTGGLETFT*ITISTL
Trigger: GAGAGTGGATATGGTAATGCAAGTAAACGTTTCCAG...GCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000471517.5
CDS-3UTR GCA 90 bp GATGAATTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTATTAATCAGGACCTCCTaGTTCACCGAGGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: DEFWDVVEKFQVITSCVVLIRTS*FTEASM
Trigger: CATCGAGGCCTCGGTGAAGCAGGAGGTCCTGATTAA...TACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTATAAGGTACACCAGCTaGTACAGTTTGCTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTIRYTS*YSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTAT...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp TGGCCCTTCTGGTTGTTCATAAGGTACACCAGCTGGTACAGTTTGCTGTCTTCGATAAGGTACACCAGCTaGTACAGTTTGCTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: WPFWLFIRYTSWYSLLSSIRYTS*YSLLSS
Trigger: CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTAT...CGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTTCTTCAGGAAGCCGTTaGTATTCATCTGGAACCTTT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTSSGSR*YSSGTF
Trigger: AAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGA...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR GCA 90 bp GATGAATTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAGAATCCAACTGCCACTaGCGCGGTTTCTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: DEFWDVVEKFQVITSCVVESNCH*RGFSHR
Trigger: TCTATGAGAGAAACCGCGGCAGTGGCAGTTGGATTC...TACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAATTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312265.9
CDS-3UTR GCA 90 bp GTTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATTGTCCCGGTCTCTCTTTGTACTCAGAGCCATTaGTATGGAAATACACAGGGC +
Preference number: 4 (lower is better)
Translates to: VEELLSHSELDVIVPVSLCTQSH*YGNTQG
Trigger: GCCCTGTGTATTTCCATAGCAATGGCTCTGAGTACA...AAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR GCA 90 bp TCAGAGACGGCATGCTCGAGATTCCGGAAATGGAGGCGTAGGTGTAGTAGGATTCTGGAAACGTTTACTTaGATTACCATATCCACTCTC +
Preference number: 4 (lower is better)
Translates to: SETACSRFRKWRRRCSRILETFT*ITISTL
Trigger: GAGAGTGGATATGGTAATGCAAGTAAACGTTTCCAG...AATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312265.9
ENST00000471517.5
CDS-3UTR GCA 90 bp TTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTAGCTGACATTCAGGGGCAAAGATaGCTTGGGGAACATTGTCAT +
Preference number: 4 (lower is better)
Translates to: FWDVVEKFQVITSCVVADIQGQR*LGEHCH
Trigger: ATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAAT...GTCAGCTACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp GGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGAGAGGCGTGACAGTAACTCTAGAACCAGTCACTTaGTTAAAACCGGTCAACTGT +
Preference number: 4 (lower is better)
Translates to: GDRLHLQDGPHKRGVTVTLEPVT*LKPVNC
Trigger: ACAGTTGACCGGTTTTAACCAAGTGACTGGTTCTAG...AGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
CDS-3UTR CCA 90 bp CGGCAGCTCGTACGCGGACTCGAGGTTGTAGATCTTTTCGTAGCTGTCCATTTCCCGTTGATATTCATCTaGAACCTTTTATCTGGAATG +
Preference number: 4 (lower is better)
Translates to: RQLVRGLEVVDLFVAVHFPLIFI*NLLSGM
Trigger: CATTCCAGATAAAAGGTTCCAGATGAATATCAACGG...GAAATGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp AAGAGAGGCCTGGGCTGGGTGACAGGTTGCATCTTCAAGATGGGCCTCATAAGACCGTTGATATTCATCTaGAACCTTTTATCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KRGLGWVTGCIFKMGLIRPLIFI*NLLSGM
Trigger: CATTCCAGATAAAAGGTTCCAGATGAATATCAACGG...TCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312265.9
ENST00000409235.8
ENST00000410018.5
ENST00000471517.5
3UTR CAA 72 bp TTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTaGCGATTAATCAGGACCTCCTGCTTCACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: FLSLSVIENSTE*RLIRTSCFTEA
Trigger: GGCCTCGGTGAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
3UTR CAA 72 bp TTGAAGAGCTCCTCTCCCACAGTGAATTGGATGTTATaGTCCCGGTCTCTCTTCAGGAAGCCGTTGATATTC +
Preference number: 4 (lower is better)
Translates to: LKSSSPTVNWML*SRSLFRKPLIF
Trigger: GAATATCAACGGCTTCCTGAAGAGAGACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471517.5
CDS-3UTR TCA 90 bp CACGAGAGAGAAGTCCTTGAAGCTGGTGTCAGTCATCAGGACGTACTTCTCATTTCTTCAGGAAGCCGTTaGTATTCATCTGGAACCTTT +
Preference number: 4 (lower is better)
Translates to: HEREVLEAGVSHQDVLLISSGSR*YSSGTF
Trigger: AAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGA...AATGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471517.5
ENST00000475343.6
CDS-3UTR TCA 90 bp GATGAATTCTGGGATGTGGTAGAGAAGTTCCAGGTCATCACTAGCTGTGTTGTATGCTCACCAACACCTTaGAGAAGAATTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: DEFWDVVEKFQVITSCVVCSPTP*RRIQGQ
Trigger: TTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCA...TACAACACAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR GCA 90 bp AGCTTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGCCGCGCTTCGCCAATTaGTCGCCAAGAAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SFLSLSVIENSTELRLIRPRFAN*SPRRSS
Trigger: ACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGG...CCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp TTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGACCTCCTCAGAGCCATTGCTATaGAAATACACAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LSLSVIENSTELRLIRTSSEPLL*KYTGHS
Trigger: GCTGTGCCCTGTGTATTTCCATAGCAATGGCTCTGA...GGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp GATGTATTCAGACCAAATTATGGAGCAGGTGGTAACTCCTATCTGCTCGCACACTCTTCAGGAAGCCGTTaGTATTCATCTGGAACCTTT +
Preference number: 4 (lower is better)
Translates to: DVFRPNYGAGGNSYLLAHSSGSR*YSSGTF
Trigger: AAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGA...GTGTGCGAGCAGATAGGAGTTACCACCTGCTCCATAATTTGGTCTGAATACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR TCA 90 bp AGCTTTTTATCCTTGAGCGTAATCGAAAATAGCACCGAGTTGCGATTAATCAGGGCTCCTCTCCCACAGTaGATTGGATGTTATTGTCCC +
Preference number: 4 (lower is better)
Translates to: SFLSLSVIENSTELRLIRAPLPQ*IGCYCP
Trigger: GGGACAATAACATCCAATTCACTGTGGGAGAGGAGC...CCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312265.9
ENST00000412458.6
ENST00000471517.5
CDS-3UTR CCA 90 bp CTCTCCACCAGCAGCAGTAGAGTATACTCACCCGCGATGTATTCAGACCAAATTCCGTTGATATTCATCTaGAACCTTTTATCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LSTSSSRVYSPAMYSDQIPLIFI*NLLSGM
Trigger: CATTCCAGATAAAAGGTTCCAGATGAATATCAACGG...AATTTGGTCTGAATACATCGCGGGTGAGTATACTCTACTGCTGCTGGTGGAGAG
43% GC, longest homopolymer 4 nt, total