Pregenerated sensors for CATSPERD (Homo sapiens)
Ensembl gene IDs: ENSG00000174898Ensembl transcript IDs: ENST00000309164.11, ENST00000381624.4, ENST00000448307.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGACAAGGGGTTGGGACCCTGTGGACCGGCCTCAGTGGTCAGACCTaGCTCCGTGAGGAGTGCGGTGGCGTCCCGGGGGCTCTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RQGVGTLWTGLSGQT*LREECGGVPGALCL Trigger: CAGGCACAGAGCCCCCGGGACGCCACCGCACTCCTCACGGAGGCAGGTCTGACCACTGAGGCCGGTCCACAGGGTCCCAACCCCTTGTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS GCA 90 bp | ACCAGCATCAACATCAGCATCGACTTGGGCTTCCGCCGCCACCACTaGCCCTCAACCGCCACGGGGAGTCGCTGCACAATCCGAGTACGT | + |
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Preference number: 5 (lower is better) Translates to: TSINISIDLGFRRHH*PSTATGSRCTIRVR Trigger: ACGTACTCGGATTGTGCAGCGACTCCCCGTGGCGGTTGAGGGGCAGTGGTGGCGGCGGAAGCCCAAGTCGATGCTGATGTTGATGCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS TCA 90 bp | GGCAGACCGTCTTGCATCTCCTACACAGCTGTGTCGCACACTTCTTaGTCCTGCGGCCGCGTGCTGTGCGTAGCAGCTTGGGGGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GRPSCISYTAVSHTS*SCGRVLCVAAWGSC Trigger: ACAAGACCCCCAAGCTGCTACGCACAGCACGCGGCCGCAGGATCAAGAAGTGTGCGACACAGCTGTGTAGGAGATGCAAGACGGTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 90 bp | GATCTGGTTTGCTGTCCGGCCGCCCAAGATCTGATACTGGACGTCTaGCCACCTCAAAGGGGCATTGTTGTTGGGGTCGTGGCAGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: DLVCCPAAQDLILDV*PPQRGIVVGVVAAH Trigger: GTGAGCTGCCACGACCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGTATCAGATCTTGGGCGGCCGGACAGCAAACCAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS TCA 90 bp | ATGAGAACTGCCCGTTCACCTCCAGTAACACATACTCGGCGTCGATaGCCTCCTGGAAACTGTCTTTTCGCCACAGCTCCACCACGGGCT | + |
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Preference number: 5 (lower is better) Translates to: MRTARSPPVTHTRRR*PPGNCLFATAPPRA Trigger: AGCCCGTGGTGGAGCTGTGGCGAAAAGACAGTTTCCAGGAGGTCATCGACGCCGAGTATGTGTTACTGGAGGTGAACGGGCAGTTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS TCA 90 bp | TTGTGGCCGAAAATGATCTGGTTTGCTGTCCGGCCGCCCAAGATCTaGTACTGGACGTCTGGCCACCTCAAAGGGGCATTGTTGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LWPKMIWFAVRPPKI*YWTSGHLKGALLLG Trigger: CCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGTATCAGATCTTGGGCGGCCGGACAGCAAACCAGATCATTTTCGGCCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS CCA 90 bp | TGGGGGTTGCTCACCATCACCAGAGGAATCAGGGATGTGCCTGGCTaGGGTATCAACGAAGCAGTCAATTCCAGCTGGCTGTGCATGTCA | + |
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Preference number: 5 (lower is better) Translates to: WGLLTITRGIRDVPG*GINEAVNSSWLCMS Trigger: TGACATGCACAGCCAGCTGGAATTGACTGCTTCGTTGATACCCCAGCCAGGCACATCCCTGATTCCTCTGGTGATGGTGAGCAACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 90 bp | TGTACTTGGTGTTCCCATCTGATGTGTAACCGTTCTCGTAGAAGGTaGCCTGGAACCCCAGGGAGTGGGGGTTGCTCACCATCACCAGAG | + |
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Preference number: 5 (lower is better) Translates to: CTWCSHLMCNRSRRR*PGTPGSGGCSPSPE Trigger: CTCTGGTGATGGTGAGCAACCCCCACTCCCTGGGGTTCCAGGCCACCTTCTACGAGAACGGTTACACATCAGATGGGAACACCAAGTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 90 bp | ATTCCTTTATCATGGTGGTCCAGTTCTGCGGCTGGGAGGTACACATaGCCGACTGGGCCGTCAGGGAATAGGAGTATGAGAACTGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: IPLSWWSSSAAGRYT*PTGPSGNRSMRTAR Trigger: ACGGGCAGTTCTCATACTCCTATTCCCTGACGGCCCAGTCGGCCATGTGTACCTCCCAGCCGCAGAACTGGACCACCATGATAAAGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS TCA 90 bp | CTGTGTCACGCAGTGGGGTCAGTATTTCCAGAGTCCCTGGGCTCCTaGACATCAGGGCCACGTCTTCTGACCAGATGTATTGGTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: LCHAVGSVFPESLGS*TSGPRLLTRCIGLQ Trigger: TTGCAGACCAATACATCTGGTCAGAAGACGTGGCCCTGATGTTCAGGAGCCCAGGGACTCTGGAAATACTGACCCCACTGCGTGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CCA 90 bp | GAGGCACTTCTGGAAATCAAAAGCTGGAAAGGCTGTGTCACGCAGTaGGGTCAGTATTTCCAGAGTCCCTGGGCTCCTGAACATCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: EALLEIKSWKGCVTQ*GQYFQSPWAPEHQG Trigger: GCCCTGATGTTCAGGAGCCCAGGGACTCTGGAAATACTGACCCCACTGCGTGACACAGCCTTTCCAGCTTTTGATTTCCAGAAGTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CCA 90 bp | AGATCTGATACTGGACGTCTGGCCACCTCAAAGGGGCATTGTTGTTaGGGTCGTGGCAGCTCACATAGTTTAGAAGCGGGGAGCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RSDTGRLATSKGHCC*GRGSSHSLEAGSSL Trigger: AAGAGAGCTCCCCGCTTCTAAACTATGTGAGCTGCCACGACCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGTATCAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448307.1 |
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| CDS CCA 90 bp | AGATCTGATACTGGACGTCTGGCCACCTCAAAGGGGCATTGTTGTTaGGGTCGTGGCAGCTCACATAGTTCTCTCTGTTCCAGAAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RSDTGRLATSKGHCC*GRGSSHSSLCSRRR Trigger: CCTTCTTCTGGAACAGAGAGAACTATGTGAGCTGCCACGACCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGTATCAGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 90 bp | GAGAAGCGCCTGGATATTCACGAGGCACTTCTGGAAATCAAAAGCTaGAAAGGCTGTGTCACGCAGTGGGGTCAGTATTTCCAGAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: EKRLDIHEALLEIKS*KGCVTQWGQYFQSP Trigger: GGGACTCTGGAAATACTGACCCCACTGCGTGACACAGCCTTTCCAGCTTTTGATTTCCAGAAGTGCCTCGTGAATATCCAGGCGCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CCA 90 bp | AGTTCAGGGTCCATGAGAAGCGCCTGGATATTCACGAGGCACTTCTaGAAATCAAAAGCTGGAAAGGCTGTGTCACGCAGTGGGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SSGSMRSAWIFTRHF*KSKAGKAVSRSGVS Trigger: ACTGACCCCACTGCGTGACACAGCCTTTCCAGCTTTTGATTTCCAGAAGTGCCTCGTGAATATCCAGGCGCTTCTCATGGACCCTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS GCA 90 bp | AATGTAGAAGACATAAAAGCCATTGTGGCCGAAAATGATCTGGTTTaGTGTCCGGCCGCCCAAGATCTGATACTGGACGTCTGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: NVEDIKAIVAENDLV*CPAAQDLILDVWPP Trigger: AGGTGGCCAGACGTCCAGTATCAGATCTTGGGCGGCCGGACAGCAAACCAGATCATTTTCGGCCACAATGGCTTTTATGTCTTCTACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS TCA 90 bp | CCACGATCGAAATGTAGAAGACATAAAAGCCATTGTGGCCGAAAATaGTCTGGTTTGCTGTCCGGCCGCCCAAGATCTGATACTGGACGT | + |
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Preference number: 5 (lower is better) Translates to: PRSKCRRHKSHCGRK*SGLLSGRPRSDTGR Trigger: ACGTCCAGTATCAGATCTTGGGCGGCCGGACAGCAAACCAGATCATTTTCGGCCACAATGGCTTTTATGTCTTCTACATTTCGATCGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS CCA 90 bp | ATCTTGCACTTTCCAACGTGGAGTTCAGGGTCCATGAGAAGCGCCTaGATATTCACGAGGCACTTCTGGAAATCAAAAGCTGGAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ILHFPTWSSGSMRSA*IFTRHFWKSKAGKA Trigger: AGCCTTTCCAGCTTTTGATTTCCAGAAGTGCCTCGTGAATATCCAGGCGCTTCTCATGGACCCTGAACTCCACGTTGGAAAGTGCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS TCA 90 bp | TATTTCCAGAGTCCCTGGGCTCCTGAACATCAGGGCCACGTCTTCTaGCCAGATGTATTGGTCTGCAAATTTGATTATGGAACTTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: YFQSPWAPEHQGHVF*PDVLVCKFDYGTWH Trigger: GTGCCAAGTTCCATAATCAAATTTGCAGACCAATACATCTGGTCAGAAGACGTGGCCCTGATGTTCAGGAGCCCAGGGACTCTGGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS TCA 90 bp | TCAGAAACTCTATCTTGCACTTTCCAACGTGGAGTTCAGGGTCCATaGGAAGCGCCTGGATATTCACGAGGCACTTCTGGAAATCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SETLSCTFQRGVQGP*EAPGYSRGTSGNQK Trigger: CTTTTGATTTCCAGAAGTGCCTCGTGAATATCCAGGCGCTTCTCATGGACCCTGAACTCCACGTTGGAAAGTGCAAGATAGAGTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CCA 90 bp | AGGGATGTGCCTGGCTGGGGTATCAACGAAGCAGTCAATTCCAGCTaGCTGTGCATGTCAATGGTATACATCCTGTATATAAATTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RDVPGWGINEAVNSS*LCMSMVYILYINSP Trigger: AGGAGAATTTATATACAGGATGTATACCATTGACATGCACAGCCAGCTGGAATTGACTGCTTCGTTGATACCCCAGCCAGGCACATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS TCA 90 bp | CTGTCTGTCATAGTGATACTTCCAAAAACTGAATCCCCCAGTATTTaGATAATATATATAAGTCTGGGATATCTGATCTCCACGGAAATA | + |
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Preference number: 5 (lower is better) Translates to: LSVIVILPKTESPSI*IIYISLGYLISTEI Trigger: TATTTCCGTGGAGATCAGATATCCCAGACTTATATATATTATTCAAATACTGGGGGATTCAGTTTTTGGAAGTATCACTATGACAGACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS GCA 72 bp | ACCGGCCTCAGTGGTCAGACCTGCCTCCGTGAGGAGTaGGGTGGCGTCCCGGGGGCTCTGTGCCTGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TGLSGQTCLREE*GGVPGALCLPW Trigger: CCAGGGCAGGCACAGAGCCCCCGGGACGCCACCGCACTCCTCACGGAGGCAGGTCTGACCACTGAGGCCGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS TCA 72 bp | CCTGTGGACCGGCCTCAGTGGTCAGACCTGCCTCCGTaGGGAGTGCGGTGGCGTCCCGGGGGCTCTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PVDRPQWSDLPP*GVRWRPGGSVP Trigger: AGGCACAGAGCCCCCGGGACGCCACCGCACTCCTCACGGAGGCAGGTCTGACCACTGAGGCCGGTCCACAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS GCA 72 bp | GTTGGGACCCTGTGGACCGGCCTCAGTGGTCAGACCTaGCTCCGTGAGGAGTGCGGTGGCGTCCCGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VGTLWTGLSGQT*LREECGGVPGA Trigger: AGCCCCCGGGACGCCACCGCACTCCTCACGGAGGCAGGTCTGACCACTGAGGCCGGTCCACAGGGTCCCAAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS GCA 72 bp | AACATCAGCATCGACTTGGGCTTCCGCCGCCACCACTaGCCCTCAACCGCCACGGGGAGTCGCTGCACAATC | + |
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Preference number: 6 (lower is better) Translates to: NISIDLGFRRHH*PSTATGSRCTI Trigger: GATTGTGCAGCGACTCCCCGTGGCGGTTGAGGGGCAGTGGTGGCGGCGGAAGCCCAAGTCGATGCTGATGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CAA 90 bp | GTGCCTGCCCTGGCTGTGGCTGAGGCCCTGAACTGGCAGACCGTCTaGCATCTCCTACACAGCTGTGTCGCACACTTCTTGATCCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: VPALAVAEALNWQTV*HLLHSCVAHFLILR Trigger: CCGCAGGATCAAGAAGTGTGCGACACAGCTGTGTAGGAGATGCAAGACGGTCTGCCAGTTCAGGGCCTCAGCCACAGCCAGGGCAGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CAA 90 bp | TGGCAGACCGTCTTGCATCTCCTACACAGCTGTGTCGCACACTTCTaGATCCTGCGGCCGCGTGCTGTGCGTAGCAGCTTGGGGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: WQTVLHLLHSCVAHF*ILRPRAVRSSLGVL Trigger: CAAGACCCCCAAGCTGCTACGCACAGCACGCGGCCGCAGGATCAAGAAGTGTGCGACACAGCTGTGTAGGAGATGCAAGACGGTCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | TCATGGTGGTCCAGTTCTGCGGCTGGGAGGTACACATaGCCGACTGGGCCGTCAGGGAATAGGAGTATGAGA | + |
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Preference number: 6 (lower is better) Translates to: SWWSSSAAGRYT*PTGPSGNRSMR Trigger: TCTCATACTCCTATTCCCTGACGGCCCAGTCGGCCATGTGTACCTCCCAGCCGCAGAACTGGACCACCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | CCGAATTCCTTTATCATGGTGGTCCAGTTCTGCGGCTaGGAGGTACACATGGCCGACTGGGCCGTCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PNSFIMVVQFCG*EVHMADWAVRE Trigger: TTCCCTGACGGCCCAGTCGGCCATGTGTACCTCCCAGCCGCAGAACTGGACCACCATGATAAAGGAATTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CAA 72 bp | CTGGCTGTGGCTGAGGCCCTGAACTGGCAGACCGTCTaGCATCTCCTACACAGCTGTGTCGCACACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LAVAEALNWQTV*HLLHSCVAHFL Trigger: CAAGAAGTGTGCGACACAGCTGTGTAGGAGATGCAAGACGGTCTGCCAGTTCAGGGCCTCAGCCACAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | TGTTCCCATCTGATGTGTAACCGTTCTCGTAGAAGGTaGCCTGGAACCCCAGGGAGTGGGGGTTGCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: CSHLMCNRSRRR*PGTPGSGGCSP Trigger: TGGTGAGCAACCCCCACTCCCTGGGGTTCCAGGCCACCTTCTACGAGAACGGTTACACATCAGATGGGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | ACCTCCAGTAACACATACTCGGCGTCGATGACCTCCTaGAAACTGTCTTTTCGCCACAGCTCCACCACGGGC | + |
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Preference number: 6 (lower is better) Translates to: TSSNTYSASMTS*KLSFRHSSTTG Trigger: GCCCGTGGTGGAGCTGTGGCGAAAAGACAGTTTCCAGGAGGTCATCGACGCCGAGTATGTGTTACTGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | ACTGGACGTCTGGCCACCTCAAAGGGGCATTGTTGTTaGGGTCGTGGCAGCTCACATAGTTTAGAAGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGRLATSKGHCC*GRGSSHSLEAG Trigger: CCCCGCTTCTAAACTATGTGAGCTGCCACGACCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448307.1 |
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| CDS TCA 72 bp | GCCCGTTCACCTCCAGTAACACATACTCGGCGTCGATaGCCTCCTGGAAACTGTCTTTTCGCCACAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ARSPPVTHTRRR*PPGNCLFATAP Trigger: TGGAGCTGTGGCGAAAAGACAGTTTCCAGGAGGTCATCGACGCCGAGTATGTGTTACTGGAGGTGAACGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS GCA 72 bp | GGGGGTTGCTCACCATCACCAGAGGAATCAGGGATGTaGCTGGCTGGGGTATCAACGAAGCAGTCAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: GGCSPSPEESGM*LAGVSTKQSIP Trigger: TGGAATTGACTGCTTCGTTGATACCCCAGCCAGGCACATCCCTGATTCCTCTGGTGATGGTGAGCAACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | ACTGGACGTCTGGCCACCTCAAAGGGGCATTGTTGTTaGGGTCGTGGCAGCTCACATAGTTCTCTCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: TGRLATSKGHCC*GRGSSHSSLCS Trigger: GGAACAGAGAGAACTATGTGAGCTGCCACGACCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | AGGCTGTTCTCAAACCATAGGAGCAGGATGCCTCTCTaGCCGGGGGCGATGAGGATGTCTAGAGTCCCATTA | + |
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Preference number: 6 (lower is better) Translates to: RLFSNHRSRMPL*PGAMRMSRVPL Trigger: TAATGGGACTCTAGACATCCTCATCGCCCCCGGCCAGAGAGGCATCCTGCTCCTATGGTTTGAGAACAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS TCA 72 bp | AAAATGATCTGGTTTGCTGTCCGGCCGCCCAAGATCTaGTACTGGACGTCTGGCCACCTCAAAGGGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: KMIWFAVRPPKI*YWTSGHLKGAL Trigger: CAATGCCCCTTTGAGGTGGCCAGACGTCCAGTATCAGATCTTGGGCGGCCGGACAGCAAACCAGATCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS GCA 72 bp | GATGACGACTCCAGCAGAGACCAGCTGCACGGGGAATaGTCCATACACGTAGATGCTAAAGATGGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DDDSSRDQLHGE*SIHVDAKDGLQ Trigger: CTGGAGACCATCTTTAGCATCTACGTGTATGGAGCATTCCCCGTGCAGCTGGTCTCTGCTGGAGTCGTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS CCA 72 bp | CTGGAAATCAAAAGCTGGAAAGGCTGTGTCACGCAGTaGGGTCAGTATTTCCAGAGTCCCTGGGCTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LEIKSWKGCVTQ*GQYFQSPWAPE Trigger: TTCAGGAGCCCAGGGACTCTGGAAATACTGACCCCACTGCGTGACACAGCCTTTCCAGCTTTTGATTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS TCA 72 bp | CTATCTTGCACTTTCCAACGTGGAGTTCAGGGTCCATaGGAAGCGCCTGGATATTCACGAGGCACTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSCTFQRGVQGP*EAPGYSRGTSG Trigger: TCCAGAAGTGCCTCGTGAATATCCAGGCGCTTCTCATGGACCCTGAACTCCACGTTGGAAAGTGCAAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS GCA 72 bp | GACATAAAAGCCATTGTGGCCGAAAATGATCTGGTTTaGTGTCCGGCCGCCCAAGATCTGATACTGGACGTC | + |
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Preference number: 6 (lower is better) Translates to: DIKAIVAENDLV*CPAAQDLILDV Trigger: GACGTCCAGTATCAGATCTTGGGCGGCCGGACAGCAAACCAGATCATTTTCGGCCACAATGGCTTTTATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS TCA 72 bp | AAAAGACAGCCCGAAACTCCGGTTGAGGGGGTGATCTaGGTACTTGAACATGCCCTTCCCTTGATTCACTAC | + |
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Preference number: 6 (lower is better) Translates to: KRQPETPVEGVI*VLEHALPLIHY Trigger: GTAGTGAATCAAGGGAAGGGCATGTTCAAGTACTCAGATCACCCCCTCAACCGGAGTTTCGGGCTGTCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CCA 72 bp | TCCATGAGAAGCGCCTGGATATTCACGAGGCACTTCTaGAAATCAAAAGCTGGAAAGGCTGTGTCACGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SMRSAWIFTRHF*KSKAGKAVSRS Trigger: ACTGCGTGACACAGCCTTTCCAGCTTTTGATTTCCAGAAGTGCCTCGTGAATATCCAGGCGCTTCTCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS TCA 72 bp | AGTCCCTGGGCTCCTGAACATCAGGGCCACGTCTTCTaGCCAGATGTATTGGTCTGCAAATTTGATTATGGA | + |
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Preference number: 6 (lower is better) Translates to: SPWAPEHQGHVF*PDVLVCKFDYG Trigger: TCCATAATCAAATTTGCAGACCAATACATCTGGTCAGAAGACGTGGCCCTGATGTTCAGGAGCCCAGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CCA 72 bp | TTTCCAACGTGGAGTTCAGGGTCCATGAGAAGCGCCTaGATATTCACGAGGCACTTCTGGAAATCAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: FPTWSSGSMRSA*IFTRHFWKSKA Trigger: AGCTTTTGATTTCCAGAAGTGCCTCGTGAATATCCAGGCGCTTCTCATGGACCCTGAACTCCACGTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS CCA 72 bp | TCTCCTGTCAGAAACTCTATCTTGCACTTTCCAACGTaGAGTTCAGGGTCCATGAGAAGCGCCTGGATATTC | + |
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Preference number: 6 (lower is better) Translates to: SPVRNSILHFPT*SSGSMRSAWIF Trigger: GAATATCCAGGCGCTTCTCATGGACCCTGAACTCCACGTTGGAAAGTGCAAGATAGAGTTTCTGACAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381624.4 |
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| CDS TCA 72 bp | CTGGATGACGATCTTTTTATCCAGGTCGCAGCCAACTaGAATCAGTGTCGACAGTGGCTTGATATCCACACA | + |
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Preference number: 6 (lower is better) Translates to: LDDDLFIQVAAN*NQCRQWLDIHT Trigger: TGTGTGGATATCAAGCCACTGTCGACACTGATTTCAGTTGGCTGCGACCTGGATAAAAAGATCGTCATCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CCA 72 bp | CCTGGCTGGGGTATCAACGAAGCAGTCAATTCCAGCTaGCTGTGCATGTCAATGGTATACATCCTGTATATA | + |
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Preference number: 6 (lower is better) Translates to: PGWGINEAVNSS*LCMSMVYILYI Trigger: TATATACAGGATGTATACCATTGACATGCACAGCCAGCTGGAATTGACTGCTTCGTTGATACCCCAGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS TCA 72 bp | AAATGTAGAAGACATAAAAGCCATTGTGGCCGAAAATaGTCTGGTTTGCTGTCCGGCCGCCCAAGATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: KCRRHKSHCGRK*SGLLSGRPRSD Trigger: ATCAGATCTTGGGCGGCCGGACAGCAAACCAGATCATTTTCGGCCACAATGGCTTTTATGTCTTCTACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000309164.11 ENST00000381624.4 ENST00000448307.1 |
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| CDS CAA 72 bp | GTCGACAGTGGCTTGATATCCACACATGAAATTTCCTaGTTTGCTATGTCCACAGTTAAGGTAGACATGGTG | + |
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Preference number: 6 (lower is better) Translates to: VDSGLISTHEIS*FAMSTVKVDMV Trigger: CACCATGTCTACCTTAACTGTGGACATAGCAAACAAGGAAATTTCATGTGTGGATATCAAGCCACTGTCGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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| CDS CAA 90 bp | GAAATCAGTGTCGACAGTGGCTTGATATCCACACATGAAATTTCCTaGTTTGCTATGTCCACAGTTAAGGTAGACATGGTGGCTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EISVDSGLISTHEIS*FAMSTVKVDMVAFF Trigger: AAAGAAAGCCACCATGTCTACCTTAACTGTGGACATAGCAAACAAGGAAATTTCATGTGTGGATATCAAGCCACTGTCGACACTGATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309164.11 ENST00000381624.4 |
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