Pregenerated sensors for CATSPERB (Homo sapiens)
Ensembl gene IDs: ENSG00000133962Ensembl transcript IDs: ENST00000256343.8, ENST00000553329.5, ENST00000556429.1, ENST00000556901.1, ENST00000557036.1, ENST00000619027.2, ENST00000631561.1, ENST00000631902.1, ENST00000632069.1, ENST00000633011.1
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTaGAAACTTCTGATCCTTTGTGCAGTTACACTCCTCCCGAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: KARNFFPAIRESNSM*KLLILCAVTLLPSG Trigger: TCCACTCGGGAGGAGTGTAACTGCACAAAGGATCAGAAGTTTTCACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR TCA 90 bp | ACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTGAAAACTTCTaGTCCTTTGTGCAGTTACACTCCTCCCGAGTGGAAACATTAGCA | + |
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Preference number: 1 (lower is better) Translates to: TFSLQSEKATACENF*SFVQLHSSRVETLA Trigger: TGCTAATGTTTCCACTCGGGAGGAGTGTAACTGCACAAAGGATCAGAAGTTTTCACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR GCA 90 bp | TCCCAGAGTGTATCACTTTTCCATAGTGTATATTGCCGAACTTCTTaGTGTAGATCGTTTCCTGGGGTTCGTTCTCAGGTACATATGCAA | + |
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Preference number: 1 (lower is better) Translates to: SQSVSLFHSVYCRTS*CRSFPGVRSQVHMQ Trigger: TTGCATATGTACCTGAGAACGAACCCCAGGAAACGATCTACAGCAAGAAGTTCGGCAATATACACTATGGAAAAGTGATACACTCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR GCA 90 bp | TCCATGTTCGTCCATTCCTTTGCCCAAAGTTGTATAAGAACCATGTaGTCTTTAGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGG | + |
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Preference number: 1 (lower is better) Translates to: SMFVHSFAQSCIRTM*SLERSYCWVHFQAW Trigger: CCATGCCTGAAAGTGCACCCAACAATATGACCTTTCTAAAGAGCACATGGTTCTTATACAACTTTGGGCAAAGGAATGGACGAACATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CCA 90 bp | CCTCATGTTCACTTCAGTCACAGTAACCAGATATGGAGATTGCAATaGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACTGGATA | + |
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Preference number: 1 (lower is better) Translates to: PHVHFSHSNQIWRLQ*DTSILVDNFQRNWI Trigger: TATCCAGTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATATCTGGTTACTGTGACTGAAGTGAACATGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CCA 90 bp | AAAACCCTGACTGTCTTTATGAACTCCACTAATCCAGTCTTCAAATaGGATAAATTTGCTAGGAATGTGATGCATAGATCTGAGATAACT | + |
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Preference number: 1 (lower is better) Translates to: KTLTVFMNSTNPVFK*DKFARNVMHRSEIT Trigger: AGTTATCTCAGATCTATGCATCACATTCCTAGCAAATTTATCCCATTTGAAGACTGGATTAGTGGAGTTCATAAAGACAGTCAGGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCTCATCTAAGGAGGTGTaGTGTGGGGCAAGCGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDASSKEV*CGASAV Trigger: GACTGCGCTTGCCCCACAGCACACCTCCTTAGATGA...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCTCCAAAGGCTGTGGGTaGTCCACTAGCTTCAAAGCG | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDASKGCG*STSFKA Trigger: CGCTTTGAAGCTAGTGGACCACCCACAGCCTTTGGA...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTTCCAAAGGCTGTGGGTaGTCCACTAGCTTCAAAGCG | + |
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Preference number: 2 (lower is better) Translates to: GNLKRGTFSLQSEKATACSKGCG*STSFKA Trigger: CGCTTTGAAGCTAGTGGACCACCCACAGCCTTTGGA...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCGAGGAACTTTTTCCCTaGAATCCGAGAAAGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDAEELFP*NPRKQQ Trigger: CTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTC...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCTTCAGTTTCCAGTTGTaGCTCATGTTCACTTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDAFSFQL*LMFTSV Trigger: GACTGAAGTGAACATGAGGCACAACTGGAAACTGAA...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCCTCAAAGCCCATATCTaGAGGCTGTCCAAAAAGATT | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDALKAHI*RLSKKI Trigger: AATCTTTTTGGACAGCCTCCAGATATGGGCTTTGAG...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCGCTGCTTTTCAGTGTTaGCACCATTGTCGTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDAAAFQC*HHCRNK Trigger: TTTGTTACGACAATGGTGCCAACACTGAAAAGCAGC...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCTCCTGGGAATGGCAATaGTGCCTCATCAACATAAAT | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDASWEWQ*CLININ Trigger: ATTTATGTTGATGAGGCACCATTGCCATTCCCAGGA...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CAA 90 bp | GTTGTGCCTCATGTTCACTTCAGTCACAGTAACCAGATATGGAGATaGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: VVPHVHFSHSNQIWR*QWDTSILVDNFQRN Trigger: GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATATCTGGTTACTGTGACTGAAGTGAACATGAGGCACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACGGTCATATTGTTGGGTaGACTTTCAGGCATGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: IWRLQWDTSILVDNFQRNGHIVG*TFRHGS Trigger: GCTACCATGCCTGAAAGTGCACCCAACAATATGACC...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCGTTCGTCCATTCCTTTaGCCAAAGTTGTATAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDAVRPFL*PKLYKN Trigger: GTTCTTATACAACTTTGGGCAAAGGAATGGACGAAC...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCCATTCGAAAACCTTTTaGATTCCGTATGACCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDAHSKTF*IPYDLS Trigger: GCTAAGGTCATACGGAATGCAAAAGGTTTTCGAATG...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTCTCAAAGCCCATATCTaGAGGCTGTCCAAAAAGATT | + |
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Preference number: 2 (lower is better) Translates to: GNLKRGTFSLQSEKATACLKAHI*RLSKKI Trigger: AATCTTTTTGGACAGCCTCCAGATATGGGCTTTGAG...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCAATTCCCATATTAGATaGAGGCCTGTAGTTTATCGG | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDANSHIR*RPVVYR Trigger: CCGATAAACTACAGGCCTCCATCTAATATGGGAATT...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CAA 90 bp | TGCCCAAAGTTGTATAAGAACCATGTGCTCTTTAGAAAGGTCATATaGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCATTC | + |
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Preference number: 2 (lower is better) Translates to: CPKLYKNHVLFRKVI*LGALSGMVAMANAF Trigger: GAATGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCTAAAGAGCACATGGTTCTTATACAACTTTGGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCCATTTCTGCAATAACTaGGGACAAAAATCCTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDAHFCNN*GQKSFR Trigger: CCTAAAGGATTTTTGTCCTCAGTTATTGCAGAAATG...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR TCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTGGCCTGAACAACTTGTaGATCAAGAGTGAGTTTATA | + |
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Preference number: 2 (lower is better) Translates to: GNLKRGTFSLQSEKATACGLNNL*IKSEFI Trigger: TATAAACTCACTCTTGATTCACAAGTTGTTCAGGCC...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCTTCCATAGTGTATATTaGCGAACTTCTTGCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LLLVSSNPSLECPPRMDAFHSVY*RTSCCR Trigger: TCTACAGCAAGAAGTTCGGCAATATACACTATGGAA...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTAATTCCCATATTAGATaGAGGCCTGTAGTTTATCGG | + |
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Preference number: 2 (lower is better) Translates to: GNLKRGTFSLQSEKATACNSHIR*RPVVYR Trigger: CCGATAAACTACAGGCCTCCATCTAATATGGGAATT...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTGTGAAACATGTTTCTTaGTATGGGTTTGCTAGGATC | + |
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Preference number: 2 (lower is better) Translates to: GNLKRGTFSLQSEKATACVKHVS*YGFARI Trigger: GATCCTAGCAAACCCATACCAAGAAACATGTTTCAC...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATTATTGCCGAACTTCTTaGTGTAGATCGTTTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNYCRTS*CRSFPG Trigger: CCCAGGAAACGATCTACAGCAAGAAGTTCGGCAATA...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACGCTGCTTTTCAGTGTTaGCACCATTGTCGTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: IWRLQWDTSILVDNFQRNAAFQC*HHCRNK Trigger: TTTGTTACGACAATGGTGCCAACACTGAAAAGCAGC...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CAA 90 bp | CCAAAGTTGTATAAGAACCATGTGCTCTTTAGAAAGGTCATATTGTaGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCATTCTTA | + |
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Preference number: 2 (lower is better) Translates to: PKLYKNHVLFRKVIL*GALSGMVAMANAFL Trigger: TAAGAATGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCTAAAGAGCACATGGTTCTTATACAACTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR TCA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACTCTTCAAACAAGGCCTaGACAACTTGTGAATCAAGA | + |
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Preference number: 2 (lower is better) Translates to: IWRLQWDTSILVDNFQRNSSNKA*TTCESR Trigger: TCTTGATTCACAAGTTGTTCAGGCCTTGTTTGAAGA...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR TCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATAGTGAAGTTGAACCCTaGTGTAAAACTTTGCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNSEVEP*CKTLLA Trigger: AGCTAGCAAAGTTTTACATCAGGGTTCAACTTCACT...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATGTTCGTCCATTCCTTTaGCCAAAGTTGTATAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNVRPFL*PKLYKN Trigger: GTTCTTATACAACTTTGGGCAAAGGAATGGACGAAC...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTGAAAGGTCATATTGTTaGGTGCACTTTCAGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: HVKHVSWYGFARICMIKIERSYC*VHFQAW Trigger: CCATGCCTGAAAGTGCACCCAACAATATGACCTTTC...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR TCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATCATTTCTGCAATAACTaGGGACAAAAATCCTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNHFCNN*GQKSFR Trigger: CCTAAAGGATTTTTGTCCTCAGTTATTGCAGAAATG...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR GCA 90 bp | ATAACTGAGGACAAAAATCCTTTAGGAGTCGTATGTTGCAATACCTTTCTTATGTTCCATAGTGTATATTaGCGAACTTCTTGCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: ITEDKNPLGVVCCNTFLMFHSVY*RTSCCR Trigger: TCTACAGCAAGAAGTTCGGCAATATACACTATGGAA...CATAAGAAAGGTATTGCAACATACGACTCCTAAAGGATTTTTGTCCTCAGTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CCA 72 bp | CACTACCGCTGTTGCCACGGCAATAAGCGTGTGTCCTaGGAATGGCAATGGTGCCTCATCAACATAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: HYRCCHGNKRVS*EWQWCLININL Trigger: CAGATTTATGTTGATGAGGCACCATTGCCATTCCCAGGACACACGCTTATTGCCGTGGCAACAGCGGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCAACCAGATATGGAGATaGCAATGGGACACGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: LLLVSSNPSLECPPRMDANQIWR*QWDTSI Trigger: GATGGACGTGTCCCATTGCAATCTCCATATCTGGTT...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CCA 72 bp | TGCCACGGCAATAAGCGTGTGTCCTGGGAATGGCAATaGTGCCTCATCAACATAAATCTGAAATTCTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: CHGNKRVSWEWQ*CLININLKFFN Trigger: ATTGAAGAATTTCAGATTTATGTTGATGAGGCACCATTGCCATTCCCAGGACACACGCTTATTGCCGTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CAA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTTTCCTTTGCCCAAAGTaGTATAAGAACCATGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GNLKRGTFSLQSEKATACFLCPK*YKNHVL Trigger: GAGCACATGGTTCTTATACAACTTTGGGCAAAGGAA...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCACACGTCCATCCTCGTaGATAATTTCCAAAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: LLLVSSNPSLECPPRMDATRPSS*IISKET Trigger: AGTTTCTTTGGAAATTATCAACGAGGATGGACGTGT...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR TCA 72 bp | AACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTaGAAACTTCTGATCCTTTGTGCAGTTACACTCCTC | + |
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Preference number: 3 (lower is better) Translates to: NFFPAIRESNSM*KLLILCAVTLL Trigger: GAGGAGTGTAACTGCACAAAGGATCAGAAGTTTTCACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR GCA 72 bp | GTATCACTTTTCCATAGTGTATATTGCCGAACTTCTTaGTGTAGATCGTTTCCTGGGGTTCGTTCTCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: VSLFHSVYCRTS*CRSFPGVRSQV Trigger: TACCTGAGAACGAACCCCAGGAAACGATCTACAGCAAGAAGTTCGGCAATATACACTATGGAAAAGTGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR CCA 72 bp | CACTTCAGTCACAGTAACCAGATATGGAGATTGCAATaGGACACGTCCATCCTCGTTGATAATTTCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: HFSHSNQIWRLQ*DTSILVDNFQR Trigger: TCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATATCTGGTTACTGTGACTGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CAA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACAGAAAGGTCATATTGTaGGGTGCACTTTCAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: IWRLQWDTSILVDNFQRNRKVIL*GALSGM Trigger: CATGCCTGAAAGTGCACCCAACAATATGACCTTTCT...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
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| 3UTR-3UTR CAA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATTTTAGAAAGGTCATATaGTTGGGTGCACTTTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNFRKVI*LGALSG Trigger: GCCTGAAAGTGCACCCAACAATATGACCTTTCTAAA...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| 3UTR-3UTR CAA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATTTCCTTTGCCCAAAGTaGTATAAGAACCATGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNFLCPK*YKNHVL Trigger: GAGCACATGGTTCTTATACAACTTTGGGCAAAGGAA...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| 3UTR GCA 72 bp | GTCCATTCCTTTGCCCAAAGTTGTATAAGAACCATGTaGTCTTTAGAAAGGTCATATTGTTGGGTGCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VHSFAQSCIRTM*SLERSYCWVHF Trigger: AAAGTGCACCCAACAATATGACCTTTCTAAAGAGCACATGGTTCTTATACAACTTTGGGCAAAGGAATGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| 3UTR CCA 72 bp | ATTATCTGTGAGTGGAATAGCAATTCCCATATTAGATaGAGGCCTGTAGTTTATCGGCAAAGTTTTGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: IICEWNSNSHIR*RPVVYRQSFDE Trigger: CTCATCAAAACTTTGCCGATAAACTACAGGCCTCCATCTAATATGGGAATTGCTATTCCACTCACAGATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| 3UTR TCA 72 bp | TTCACTCTTCAGACTTTGATCTATGAATCAGCTCACTaGGAGAGATACTTGAAAACTTCTCTTGGTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FTLQTLIYESAH*ERYLKTSLGFF Trigger: GAAGAAACCAAGAGAAGTTTTCAAGTATCTCTCTCAGTGAGCTGATTCATAGATCAAAGTCTGAAGAGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| 3UTR CCA 72 bp | ACTGTCTTTATGAACTCCACTAATCCAGTCTTCAAATaGGATAAATTTGCTAGGAATGTGATGCATAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: TVFMNSTNPVFK*DKFARNVMHRS Trigger: AGATCTATGCATCACATTCCTAGCAAATTTATCCCATTTGAAGACTGGATTAGTGGAGTTCATAAAGACAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTAAGTGGCTTCGGGGATaGAATACCATTCCAACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRLSKKISRISKGCGWSTKWLRG*NTIPTG Trigger: TCCCGTTGGAATGGTATTTCATCCCCGAAGCCACTT...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTACTTCTGATCCTTTGTaGAGTTACACTCCTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WRLSKKISRISKGCGWSTTSDPL*SYTPPE Trigger: CTCGGGAGGAGTGTAACTGCACAAAGGATCAGAAGT...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTGCACTCAGTAGAGGCTaGCCACATAATAAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNLKRGTFSLQSEKATACALSRG*PHNKCQ Trigger: CTGGCATTTATTATGTGGTCAGCCTCTACTGAGTGC...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATTCATCTAAGGAGGTGTaGTGTGGGGCAAGCGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNSSKEV*CGASAV Trigger: GACTGCGCTTGCCCCACAGCACACCTCCTTAGATGA...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTGGTCATATTGTTGGGTaGACTTTCAGGCATGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GNLKRGTFSLQSEKATACGHIVG*TFRHGS Trigger: GCTACCATGCCTGAAAGTGCACCCAACAATATGACC...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTGAAAGGTCATATTGTTaGGTGCACTTTCAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: WRLSKKISRISKGCGWSTERSYC*VHFQAW Trigger: CCATGCCTGAAAGTGCACCCAACAATATGACCTTTC...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTCACAGTAACCAGATATaGAGATTGCAATGGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: WRLSKKISRISKGCGWSTHSNQI*RLQWDT Trigger: CGTGTCCCATTGCAATCTCCATATCTGGTTACTGTG...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTAATAAGCGTGTGTCCTaGGAATGGCAATGGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKANKRVS*EWQWCL Trigger: GAGGCACCATTGCCATTCCCAGGACACACGCTTATT...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCACTTCTAATCCATCTTTaGAATGTCCTCCACGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVILLGALSGMVAMANALLIHL*NVLHGW Trigger: CCATCCGTGGAGGACATTCCAAAGATGGATTAGAAG...TGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATAAGTGGCTTCGGGGATaGAATACCATTCCAACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNKWLRG*NTIPTG Trigger: TCCCGTTGGAATGGTATTTCATCCCCGAAGCCACTT...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTAGTGAAGTTGAACCCTaGTGTAAAACTTTGCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WRLSKKISRISKGCGWSTSEVEP*CKTLLA Trigger: AGCTAGCAAAGTTTTACATCAGGGTTCAACTTCACT...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGCACTCAGTAGAGGCTaGCCACATAATAAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKAALSRG*PHNKCQ Trigger: CTGGCATTTATTATGTGGTCAGCCTCTACTGAGTGC...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTGCATGTGAAAACTTCTaGTCCTTTGTGCAGTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GNLKRGTFSLQSEKATACACENF*SFVQLH Trigger: GTGTAACTGCACAAAGGATCAGAAGTTTTCACATGC...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCTCACTCTTCAGACTTTaGTCTATGAATCAGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLLVSSNPSLECPPRMDASLFRL*SMNQLT Trigger: AGTGAGCTGATTCATAGATCAAAGTCTGAAGAGTGA...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTTCATCTAAGGAGGTGTaGTGTGGGGCAAGCGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKISSKEV*CGASAV Trigger: GACTGCGCTTGCCCCACAGCACACCTCCTTAGATGA...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTGTTCGTCCATTCCTTTaGCCAAAGTTGTATAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WRLSKKISRISKGCGWSTVRPFL*PKLYKN Trigger: GTTCTTATACAACTTTGGGCAAAGGAATGGACGAAC...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTACTTCTGATCCTTTGTaGAGTTACACTCCTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKATSDPL*SYTPPE Trigger: CTCGGGAGGAGTGTAACTGCACAAAGGATCAGAAGT...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTAGCTTCAGAGGAACTTTTTCCCTaGAATCCGAGAAAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPKRFLEFPKAVGGPLASEELFP*NPRKQQ Trigger: CTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTC...TGAAGCTAGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCAGCTGCTTTTCAGTGTTaGCACCATTGTCGTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKVILLGALSGMVAMANAAAFQC*HHCRNK Trigger: TTTGTTACGACAATGGTGCCAACACTGAAAAGCAGC...TGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCGTGAAACATGTTTCTTaGTATGGGTTTGCTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLVSSNPSLECPPRMDAVKHVS*YGFARI Trigger: GATCCTAGCAAACCCATACCAAGAAACATGTTTCAC...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTTCCTGGGAATGGCAATaGTGCCTCATCAACATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNLKRGTFSLQSEKATACSWEWQ*CLININ Trigger: ATTTATGTTGATGAGGCACCATTGCCATTCCCAGGA...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCACAAAAAGTTACTCCTaGAATGACGGTCACTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLVSSNPSLECPPRMDATKSYS*NDGHSK Trigger: TTTAGAGTGACCGTCATTTCAGGAGTAACTTTTTGT...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCACTGAGAGAGATACTTaGAAACTTCTCTTGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLVSSNPSLECPPRMDATERDT*KLLLVS Trigger: AGAAACCAAGAGAAGTTTTCAAGTATCTCTCTCAGT...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTAGTAACACTTCCGACTaGACTGTATCTTCCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKASNTSD*TVSSHS Trigger: GGAATGGGAAGATACAGTGCAGTCGGAAGTGTTACT...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTTTCCATAGTGTATATTaGCGAACTTCTTGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRLSKKISRISKGCGWSTFHSVY*RTSCCR Trigger: TCTACAGCAAGAAGTTCGGCAATATACACTATGGAA...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTGTTCGTCCATTCCTTTaGCCAAAGTTGTATAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GNLKRGTFSLQSEKATACVRPFL*PKLYKN Trigger: GTTCTTATACAACTTTGGGCAAAGGAATGGACGAAC...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTTCCAAAGGCTGTGGGTaGTCCACTAGCTTCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKISKGCG*STSFKA Trigger: CGCTTTGAAGCTAGTGGACCACCCACAGCCTTTGGA...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTAGCTTCAGCTGCTTTTCAGTGTTaGCACCATTGTCGTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPKRFLEFPKAVGGPLASAAFQC*HHCRNK Trigger: TTTGTTACGACAATGGTGCCAACACTGAAAAGCAGC...TGAAGCTAGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTATATGGAGATTGCAATaGGACACGTCCATCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKAIWRLQ*DTSILV Trigger: AACGAGGATGGACGTGTCCCATTGCAATCTCCATAT...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACCACAGTAACCAGATATaGAGATTGCAATGGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: IWRLQWDTSILVDNFQRNHSNQI*RLQWDT Trigger: CGTGTCCCATTGCAATCTCCATATCTGGTTACTGTG...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCACATTTCTGCAATAACTaGGGACAAAAATCCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVILLGALSGMVAMANAHFCNN*GQKSFR Trigger: CCTAAAGGATTTTTGTCCTCAGTTATTGCAGAAATG...TGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTAGCTTCATCTTCAAACAAGGCCTaGACAACTTGTGAATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPKRFLEFPKAVGGPLASSSNKA*TTCESR Trigger: TCTTGATTCACAAGTTGTTCAGGCCTTGTTTGAAGA...TGAAGCTAGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGCATGTGAAAACTTCTaGTCCTTTGTGCAGTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKAACENF*SFVQLH Trigger: GTGTAACTGCACAAAGGATCAGAAGTTTTCACATGC...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTAGCTTCAGAAAGCAACAGCATGTaGAAACTTCTGATCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPKRFLEFPKAVGGPLASESNSM*KLLILC Trigger: ACAAAGGATCAGAAGTTTTCACATGCTGTTGCTTTC...TGAAGCTAGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATAGTAACACTTCCGACTaGACTGTATCTTCCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNSNTSD*TVSSHS Trigger: GGAATGGGAAGATACAGTGCAGTCGGAAGTGTTACT...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCATTCCATAGTGTATATTaGCGAACTTCTTGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKVILLGALSGMVAMANAFHSVY*RTSCCR Trigger: TCTACAGCAAGAAGTTCGGCAATATACACTATGGAA...TGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTTTCAGTTTCCAGTTGTaGCTCATGTTCACTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKAFSFQL*LMFTSV Trigger: GACTGAAGTGAACATGAGGCACAACTGGAAACTGAA...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCACTTCCCATTCCTGATTaGCATAAGCATACAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKVILLGALSGMVAMANALPIPD*HKHTKS Trigger: ACTTTTTGTATGCTTATGGCAATCAGGAATGGGAAG...TGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATATATGGAGATTGCAATaGGACACGTCCATCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNIWRLQ*DTSILV Trigger: AACGAGGATGGACGTGTCCCATTGCAATCTCCATAT...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | ATAACTGAGGACAAAAATCCTTTAGGAGTCGTATGTTGCAATACCTTTCTTATGAATAAGCGTGTGTCCTaGGAATGGCAATGGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITEDKNPLGVVCCNTFLMNKRVS*EWQWCL Trigger: GAGGCACCATTGCCATTCCCAGGACACACGCTTATT...CATAAGAAAGGTATTGCAACATACGACTCCTAAAGGATTTTTGTCCTCAGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACGAAAGCAACAGCATGTaGAAACTTCTGATCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IWRLQWDTSILVDNFQRNESNSM*KLLILC Trigger: ACAAAGGATCAGAAGTTTTCACATGCTGTTGCTTTC...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTAGCTTCATATGAATCAGCTCACTaGGAGAGATACTTGAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CPKRFLEFPKAVGGPLASYESAH*ERYLKT Trigger: AGTTTTCAAGTATCTCTCTCAGTGAGCTGATTCATA...TGAAGCTAGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATTCAGACTTTGATCTATaGATCAGCTCACTGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNSDFDL*ISSLRE Trigger: CTCTCTCAGTGAGCTGATTCATAGATCAAAGTCTGA...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTTCACTCTTCAGACTTTaGTCTATGAATCAGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKASLFRL*SMNQLT Trigger: AGTGAGCTGATTCATAGATCAAAGTCTGAAGAGTGA...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTCATTCGAAAACCTTTTaGATTCCGTATGACCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPISGGCPKRFLEFPKAHSKTF*IPYDLS Trigger: GCTAAGGTCATACGGAATGCAAAAGGTTTTCGAATG...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATCTCAAAGCCCATATCTaGAGGCTGTCCAAAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNLKAHI*RLSKKI Trigger: AATCTTTTTGGACAGCCTCCAGATATGGGCTTTGAG...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| 3UTR CAA 72 bp | TATAAGAACCATGTGCTCTTTAGAAAGGTCATATTGTaGGGTGCACTTTCAGGCATGGTAGCAATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVLFRKVIL*GALSGMVAMAN Trigger: ATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCTAAAGAGCACATGGTTCTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATTCTTCAAACAAGGCCTaGACAACTTGTGAATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNSSNKA*TTCESR Trigger: TCTTGATTCACAAGTTGTTCAGGCCTTGTTTGAAGA...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTTATTGCCGAACTTCTTaGTGTAGATCGTTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKIYCRTS*CRSFPG Trigger: CCCAGGAAACGATCTACAGCAAGAAGTTCGGCAATA...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTCTTCTAATCCATCTTTaGAATGTCCTCCACGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKILLIHL*NVLHGW Trigger: CCATCCGTGGAGGACATTCCAAAGATGGATTAGAAG...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTTCAGACTTTGATCTATaGATCAGCTCACTGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKISDFDL*ISSLRE Trigger: CTCTCTCAGTGAGCTGATTCATAGATCAAAGTCTGA...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTTTCAGTTTCCAGTTGTaGCTCATGTTCACTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKIFSFQL*LMFTSV Trigger: GACTGAAGTGAACATGAGGCACAACTGGAAACTGAA...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATCTTCCCATTCCTGATTaGCATAAGCATACAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNLPIPD*HKHTKS Trigger: ACTTTTTGTATGCTTATGGCAATCAGGAATGGGAAG...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| 3UTR CAA 72 bp | AGATATGGAGATTGCAATGGGACACGTCCATCCTCGTaGATAATTTCCAAAGAAACTGGATATTGTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: RYGDCNGTRPSS*IISKETGYCVI Trigger: AATTACACAATATCCAGTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | ATAACTGAGGACAAAAATCCTTTAGGAGTCGTATGTTGCAATACCTTTCTTATGAGTGAAGTTGAACCCTaGTGTAAAACTTTGCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITEDKNPLGVVCCNTFLMSEVEP*CKTLLA Trigger: AGCTAGCAAAGTTTTACATCAGGGTTCAACTTCACT...CATAAGAAAGGTATTGCAACATACGACTCCTAAAGGATTTTTGTCCTCAGTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR GCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTCATTCGAAAACCTTTTaGATTCCGTATGACCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKIHSKTF*IPYDLS Trigger: GCTAAGGTCATACGGAATGCAAAAGGTTTTCGAATG...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CCA 90 bp | CATGTGAAACATGTTTCTTGGTATGGGTTTGCTAGGATCTGCATGATAAAAATTAATTCCCATATTAGATaGAGGCCTGTAGTTTATCGG | + |
|
Preference number: 4 (lower is better) Translates to: HVKHVSWYGFARICMIKINSHIR*RPVVYR Trigger: CCGATAAACTACAGGCCTCCATCTAATATGGGAATT...AATTTTTATCATGCAGATCCTAGCAAACCCATACCAAGAAACATGTTTCACATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR TCA 90 bp | ATAACTGAGGACAAAAATCCTTTAGGAGTCGTATGTTGCAATACCTTTCTTATGACAAAAAGTTACTCCTaGAATGACGGTCACTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITEDKNPLGVVCCNTFLMTKSYS*NDGHSK Trigger: TTTAGAGTGACCGTCATTTCAGGAGTAACTTTTTGT...CATAAGAAAGGTATTGCAACATACGACTCCTAAAGGATTTTTGTCCTCAGTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS CCA 90 bp | CCCAAGTATTACTCAGCCGCTTGCCGTTCACCTCGTGCAGTTGCATaGGACCTAGAAAGCCTGTGTCATTCTGAATTCTGCATCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKYYSAACRSPRAVA*DLESLCHSEFCIPG Trigger: TCCTGGGATGCAGAATTCAGAATGACACAGGCTTTCTAGGTCCCATGCAACTGCACGAGGTGAACGGCAAGCGGCTGAGTAATACTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556429.1 ENST00000632069.1 |
||
| CDS GCA 90 bp | GCCTGTGTCATTCTGAATTCTGCATCCCAGGACTACCAAACTAACTaGTCTTGGCCCCTGCCAGTGCAGGGATCCAGACGGAAACATAAA | + |
|
Preference number: 5 (lower is better) Translates to: ACVILNSASQDYQTN*SWPLPVQGSRRKHK Trigger: TTTATGTTTCCGTCTGGATCCCTGCACTGGCAGGGGCCAAGAGCAGTTAGTTTGGTAGTCCTGGGATGCAGAATTCAGAATGACACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000556429.1 ENST00000632069.1 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCCCACGGATGGATGCCTaGCAGTTGAAACATAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLVSSNPSLECPPRMDAPRMDA*QLKHKC Trigger: GCATTTATGTTTCAACTGCAAGGCATCCATCCGTGG...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCAAACCAGATATGGAGATaGCAATGGGACACGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RKVILLGALSGMVAMANANQIWR*QWDTSI Trigger: GATGGACGTGTCCCATTGCAATCTCCATATCTGGTT...TGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | GGAAACTTAAAGCGAGGAACTTTTTCCCTGCAATCCGAGAAAGCAACAGCATGTCCACGGATGGATGCCTaGCAGTTGAAACATAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GNLKRGTFSLQSEKATACPRMDA*QLKHKC Trigger: GCATTTATGTTTCAACTGCAAGGCATCCATCCGTGG...ACATGCTGTTGCTTTCTCGGATTGCAGGGAAAAAGTTCCTCGCTTTAAGTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTTGGTTTCTTCTAATCCATCTTTGGAATGTCCTCCACGGATGGATGCCTCTTCTAATCCATCTTaGGAATGTCCTCCACGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLVSSNPSLECPPRMDASSNPS*ECPPRM Trigger: CATCCGTGGAGGACATTCCAAAGATGGATTAGAAGA...GGCATCCATCCGTGGAGGACATTCCAAAGATGGATTAGAAGAAACCAAGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTTTTAGAAAGGTCATATaGTTGGGTGCACTTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WRLSKKISRISKGCGWSTFRKVI*LGALSG Trigger: GCCTGAAAGTGCACCCAACAATATGACCTTTCTAAA...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGTCATATTGTTGGGTGCACTTTCAGGCATGGTAGCAATGGCTAATGCAAAAACTTCTGATCCTTaGTGCAGTTACACTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RKVILLGALSGMVAMANAKTSDP*CSYTPP Trigger: GGGAGGAGTGTAACTGCACAAAGGATCAGAAGTTTT...TGCATTAGCCATTGCTACCATGCCTGAAAGTGCACCCAACAATATGACCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS GCA 90 bp | ACCCAGAGTGTATCACTTTTCCATAGTGTATATTGCCGAACTTCTTaGTGTAGATCGTTTCCTGGGGTTCGTTCTCAGGTACATATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TQSVSLFHSVYCRTS*CRSFPGVRSQVHMQ Trigger: TTGCATATGTACCTGAGAACGAACCCCAGGAAACGATCTACAGCAAGAAGTTCGGCAATATACACTATGGAAAAGTGATACACTCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556901.1 ENST00000631561.1 |
||
| CDS GCA 90 bp | ATGCATATCACTACCCAGAGTGTATCACTTTTCCATAGTGTATATTaGCGAACTTCTTGCTGTAGATCGTTTCCTGGGGTTCGTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MHITTQSVSLFHSVY*RTSCCRSFPGVRSQ Trigger: CTGAGAACGAACCCCAGGAAACGATCTACAGCAAGAAGTTCGGCAATATACACTATGGAAAAGTGATACACTCTGGGTAGTGATATGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556901.1 ENST00000631561.1 |
||
| CDS-3UTR CAA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTAACCAGATATGGAGATaGCAATGGGACACGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SKPISGGCPKRFLEFPKANQIWR*QWDTSI Trigger: GATGGACGTGTCCCATTGCAATCTCCATATCTGGTT...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTGGTCCACTCCCTTTATGCTTAAGTaGAGACCTGAAGGATTATAC | + |
|
Preference number: 5 (lower is better) Translates to: WRLSKKISRISKGCGWSTPFMLK*RPEGLY Trigger: GTATAATCCTTCAGGTCTCAACTTAAGCATAAAGGG...AGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACAAAACTTCTGATCCTTaGTGCAGTTACACTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IWRLQWDTSILVDNFQRNKTSDP*CSYTPP Trigger: GGGAGGAGTGTAACTGCACAAAGGATCAGAAGTTTT...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATAGAAAGGTCATATTGTaGGGTGCACTTTCAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNRKVIL*GALSGM Trigger: CATGCCTGAAAGTGCACCCAACAATATGACCTTTCT...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | TCAAAGCCCATATCTGGAGGCTGTCCAAAAAGATTTCTAGAATTTCCAAAGGCTACACGTCCATCCTCGTaGATAATTTCCAAAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SKPISGGCPKRFLEFPKATRPSS*IISKET Trigger: AGTTTCTTTGGAAATTATCAACGAGGATGGACGTGT...AGCCTTTGGAAATTCTAGAAATCTTTTTGGACAGCCTCCAGATATGGGCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | ATATGGAGATTGCAATGGGACACGTCCATCCTCGTTGATAATTTCCAAAGAAACCTGCAGCACCAAGAATaGGTTCTACTAATTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IWRLQWDTSILVDNFQRNLQHQE*VLLIVS Trigger: TGAAACAATTAGTAGAACCAATTCTTGGTGCTGCAG...GTTTCTTTGGAAATTATCAACGAGGATGGACGTGTCCCATTGCAATCTCCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | CGGCAAAGTTTTGATGAGGTTAAAACCCTGACTGTCTTTATGAACTCCACTAATCTGCAGCACCAAGAATaGGTTCTACTAATTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQSFDEVKTLTVFMNSTNLQHQE*VLLIVS Trigger: TGAAACAATTAGTAGAACCAATTCTTGGTGCTGCAG...ATTAGTGGAGTTCATAAAGACAGTCAGGGTTTTAACCTCATCAAAACTTTGCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | ATAACTGAGGACAAAAATCCTTTAGGAGTCGTATGTTGCAATACCTTTCTTATGTTTAGAAAGGTCATATaGTTGGGTGCACTTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITEDKNPLGVVCCNTFLMFRKVI*LGALSG Trigger: GCCTGAAAGTGCACCCAACAATATGACCTTTCTAAA...CATAAGAAAGGTATTGCAACATACGACTCCTAAAGGATTTTTGTCCTCAGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | ATAACTGAGGACAAAAATCCTTTAGGAGTCGTATGTTGCAATACCTTTCTTATGTTCCTTTGCCCAAAGTaGTATAAGAACCATGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ITEDKNPLGVVCCNTFLMFLCPK*YKNHVL Trigger: GAGCACATGGTTCTTATACAACTTTGGGCAAAGGAA...CATAAGAAAGGTATTGCAACATACGACTCCTAAAGGATTTTTGTCCTCAGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS-3UTR CAA 90 bp | ATAACTGAGGACAAAAATCCTTTAGGAGTCGTATGTTGCAATACCTTTCTTATGCCCTTTATGCTTAAGTaGAGACCTGAAGGATTATAC | + |
|
Preference number: 5 (lower is better) Translates to: ITEDKNPLGVVCCNTFLMPFMLK*RPEGLY Trigger: GTATAATCCTTCAGGTCTCAACTTAAGCATAAAGGG...CATAAGAAAGGTATTGCAACATACGACTCCTAAAGGATTTTTGTCCTCAGTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557036.1 ENST00000633011.1 |
||
| CDS GCA 72 bp | ATTCTGAATTCTGCATCCCAGGACTACCAAACTAACTaGTCTTGGCCCCTGCCAGTGCAGGGATCCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: ILNSASQDYQTN*SWPLPVQGSRR Trigger: CCGTCTGGATCCCTGCACTGGCAGGGGCCAAGAGCAGTTAGTTTGGTAGTCCTGGGATGCAGAATTCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000556429.1 ENST00000632069.1 |
||
| CDS GCA 72 bp | ACCCAAGTATTACTCAGCCGCTTGCCGTTCACCTCGTaGAGTTGCATGGGACCTAGAAAGCCTGTGTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: TQVLLSRLPFTS*SCMGPRKPVSF Trigger: GAATGACACAGGCTTTCTAGGTCCCATGCAACTGCACGAGGTGAACGGCAAGCGGCTGAGTAATACTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556429.1 ENST00000632069.1 |
||
| CDS CCA 72 bp | TACTCAGCCGCTTGCCGTTCACCTCGTGCAGTTGCATaGGACCTAGAAAGCCTGTGTCATTCTGAATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YSAACRSPRAVA*DLESLCHSEFC Trigger: GCAGAATTCAGAATGACACAGGCTTTCTAGGTCCCATGCAACTGCACGAGGTGAACGGCAAGCGGCTGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556429.1 ENST00000632069.1 |
||
| CDS CCA 72 bp | TCCAAAAAGATTTCTAGAATTTCCAAAGGCTGTGGGTaGTCCACTAGCTTCAAAGCGACCCAGAGTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SKKISRISKGCG*STSFKATQSQL Trigger: AAGCTGACTCTGGGTCGCTTTGAAGCTAGTGGACCACCCACAGCCTTTGGAAATTCTAGAAATCTTTTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000256343.8 ENST00000556901.1 ENST00000557036.1 ENST00000619027.2 ENST00000631561.1 ENST00000633011.1 |
||
| CDS TCA 72 bp | ATTTCACTTTCTGGAATCACATCCCCAGGAGTCCACTaGAGAATCGGTTCTCGAATAACATCCAATAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: ISLSGITSPGVH*RIGSRITSNRV Trigger: AACTCTATTGGATGTTATTCGAGAACCGATTCTTCAGTGGACTCCTGGGGATGTGATTCCAGAAAGTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000256343.8 ENST00000553329.5 ENST00000619027.2 ENST00000631902.1 |
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| CDS CAA 90 bp | GCTTGGCCTGATGGCACTGATATAAATGGTCCTAGGTTTCTAAAATaGGGGCAGCATGCAAGACATCTAGGAGTTTATAAATGTATTTGG | + |
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Preference number: 6 (lower is better) Translates to: AWPDGTDINGPRFLK*GQHARHLGVYKCIW Trigger: CCAAATACATTTATAAACTCCTAGATGTCTTGCATGCTGCCCCAATTTTAGAAACCTAGGACCATTTATATCAGTGCCATCAGGCCAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556901.1 ENST00000631561.1 |
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| CDS CAA 72 bp | ACCGGTTTTCTGCAAATAGAAGTAACAGATGTTGACTaGTTTTTCTGCGTTGCGGGATTTCTGCAAACTGAT | + |
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Preference number: 6 (lower is better) Translates to: TGFLQIEVTDVD*FFCVAGFLQTD Trigger: ATCAGTTTGCAGAAATCCCGCAACGCAGAAAAACAAGTCAACATCTGTTACTTCTATTTGCAGAAAACCGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000556429.1 ENST00000632069.1 |
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| CDS CAA 90 bp | AAGCCTAGTAATGCCACATCATTGGCACAGGGGCATTTTGTCACTTaGAGATCTACCACATGTGGATATAATTTACTGATTTCACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KPSNATSLAQGHFVT*RSTTCGYNLLISLS Trigger: AGAAAGTGAAATCAGTAAATTATATCCACATGTGGTAGATCTCAAAGTGACAAAATGCCCCTGTGCCAATGATGTGGCATTACTAGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000256343.8 ENST00000553329.5 ENST00000619027.2 ENST00000631902.1 |
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| CDS TCA 72 bp | ATGTGTTGGTCTCTAGGATATACAAGAATTGTCATTTaGGTAAACTCAGTGGATAGGAAGTATCCAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: MCWSLGYTRIVI*VNSVDRKYPVL Trigger: CAACACTGGATACTTCCTATCCACTGAGTTTACTCAAATGACAATTCTTGTATATCCTAGAGACCAACACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556901.1 ENST00000631561.1 |
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| CDS GCA 72 bp | TGGTATCATAATCATGCCAGAATCCACCAAAGGTTATaGCTATGTAAACACCATCAACTATTGTATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: WYHNHARIHQRL*LCKHHQLLYPQ Trigger: TTGTGGATACAATAGTTGATGGTGTTTACATAGGCATAACCTTTGGTGGATTCTGGCATGATTATGATACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256343.8 ENST00000619027.2 |
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| CDS CCA 72 bp | ATATTTTTGATACTCACGAAACACATTTCTATAGCTTaGCCTGATGGCACTGATATAAATGGTCCTAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: IFLILTKHISIA*PDGTDINGPRF Trigger: AAACCTAGGACCATTTATATCAGTGCCATCAGGCCAAGCTATAGAAATGTGTTTCGTGAGTATCAAAAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000556901.1 ENST00000631561.1 |
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