RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASZ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130940

Ensembl transcript IDs: ENST00000344008.5, ENST00000377022.8, ENST00000447850.3, ENST00000472814.1, ENST00000478728.2, ENST00000490176.1, ENST00000492173.1, ENST00000496432.6

Found 954 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCAGCCGGGCCCTGGGGTGGGGCTGAGCTGGAGCTCCGCGGCTaGTACTCCCGTGAGGCTTCCTCCACGGTCCCTGTAGTGTCACCC +
Preference number: 1 (lower is better)
Translates to: GAAGPWGGAELELRG*YSREASSTVPVVSP
Trigger: GGGTGACACTACAGGGACCGTGGAGGAAGCCTCACGGGAGTAGCAGCCGCGGAGCTCCAGCTCAGCCCCACCCCAGGGCCCGGCTGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR GCA 90 bp TGGCCCTGGCAGGATCACCACATGCCCTGCAGGAGCAGTAGCCACTaGCGCCACCATCGGCCCACGCGGGCTGGCCTGCTCTGGGACAGG +
Preference number: 1 (lower is better)
Translates to: WPWQDHHMPCRSSSH*RHHRPTRAGLLWDR
Trigger: CCTGTCCCAGAGCAGGCCAGCCCGCGTGGGCCGATGGTGGCGGCAGTGGCTACTGCTCCTGCAGGGCATGTGGTGATCCTGCCAGGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR GCA 90 bp CATCCAGTGAGGAGGGTCCCTTCCACCCAAGAGCTCAGACCACTGTaGAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGAC +
Preference number: 1 (lower is better)
Translates to: HPVRRVPSTQELRPL*RPVTAWRGLAPTRD
Trigger: GTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTGGGTGGAAGGGACCCTCCTCACTGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 90 bp CCTTCCACCCAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTaGAGGGGCCTGGCCCCTACCCGTGACTTCACGTGCCCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: PSTQELRPLCRPVTA*RGLAPTRDFTCPAE
Trigger: CTCTGCAGGGCACGTGAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTGGGTGGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR TCA 90 bp ACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTaGCTTCACGTGCCCTGCAGAGATTCAGCCATGGGTGTGAGCCAC +
Preference number: 1 (lower is better)
Translates to: TVQASDGLEGPGPYP*LHVPCRDSAMGVSH
Trigger: GTGGCTCACACCCATGGCTGAATCTCTGCAGGGCACGTGAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 90 bp GCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTaGGAGTTGTCCTCTGAGGACCACCACGCCCAGTCCACCCCACCT +
Preference number: 1 (lower is better)
Translates to: ANTEARRETQPSLSG*ELSSEDHHAQSTPP
Trigger: AGGTGGGGTGGACTGGGCGTGGTGGTCCTCAGAGGACAACTCCCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR TCA 90 bp CCTACCCGTGACTTCACGTGCCCTGCAGAGATTCAGCCATGGGTGTaGGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAG +
Preference number: 1 (lower is better)
Translates to: PTRDFTCPAEIQPWV*ATEEANTEARRETQ
Trigger: CTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGAATCTCTGCAGGGCACGTGAAGTCACGGGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 90 bp GGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCACGTaGTGCCCACAGAGTTCAGGAGGCTCTGGTAGGGGCTGTTTTAGA +
Preference number: 1 (lower is better)
Translates to: GLWRVTVWADAHSST*CPQSSGGSGRGCFR
Trigger: TCTAAAACAGCCCCTACCAGAGCCTCCTGAACTCTGTGGGCACCACGTGCTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR TCA 90 bp GCCTCTACAAAAACCCTGGACCAAATCCCACAGGATAAACGGGACTaGGCCTCCAACCTCAGGCCGGGCCCAGGCGGGTCTGCACTCTCA +
Preference number: 1 (lower is better)
Translates to: ASTKTLDQIPQDKRD*ASNLRPGPGGSALS
Trigger: TGAGAGTGCAGACCCGCCTGGGCCCGGCCTGAGGTTGGAGGCTCAGTCCCGTTTATCCTGTGGGATTTGGTCCAGGGTTTTTGTAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTaGAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAGCA +
Preference number: 1 (lower is better)
Translates to: ARASMASSSPGRGMF*KGNPIWVDCTSEEA
Trigger: TGCTTCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CCA 90 bp GTGAAGACAGACAGCCTCAAACAGTTAAGGCCTCTACAAAAACCCTaGACCAAATCCCACAGGATAAACGGGACTGAGCCTCCAACCTCA +
Preference number: 1 (lower is better)
Translates to: VKTDSLKQLRPLQKP*TKSHRINGTEPPTS
Trigger: TGAGGTTGGAGGCTCAGTCCCGTTTATCCTGTGGGATTTGGTCCAGGGTTTTTGTAGAGGCCTTAACTGTTTGAGGCTGTCTGTCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR TCA 90 bp ATAATCCAATTTATTACTTTTATTGAGAACAGGAAGCCGCACACATaGCAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAT +
Preference number: 1 (lower is better)
Translates to: IIQFITFIENRKPHT*QYKVTVLPARSHHH
Trigger: ATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAAAAGTAATAAATTGGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR TCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACAGGATCCTAGCTGCATaGGGGAGGCCCCGCCAGCGG +
Preference number: 2 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDRILAA*GRPRQR
Trigger: CCGCTGGCGGGGCCTCCCTCATGCAGCTAGGATCCT...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCAGCCTCGGTTTCCCTaGGGCGGAGGCTGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQQPRFP*GGGWGQ
Trigger: CTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR TCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCGCCCGTCCCAGTCCTaGGCAATGGTCGCGGGGCCG +
Preference number: 2 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQRPSQS*AMVAGP
Trigger: CGGCCCCGCGACCATTGCTCAGGACTGGGACGGGCG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR GCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCAGGAGCAGTAGCCACTaGCGCCACCATCGGCCCACG +
Preference number: 2 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFRSSSH*RHHRPT
Trigger: CGTGGGCCGATGGTGGCGGCAGTGGCTACTGCTCCT...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGTCACCCGTGCTGACTaGCTTCTGCCCGTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQVTRAD*LLPVSP
Trigger: GGGGGAGACGGGCAGAAGGCAGTCAGCACGGGTGAC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCCCTGGGGCGGAGGCTaGGGCCAGGGAGTCGCCAAA +
Preference number: 2 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQPWGGG*GQGVAK
Trigger: TTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CAA 90 bp GACAGCAGCACCATCCGCAGTGAGGAACAGGGCCTCCTAGCGCCCTaGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCC +
Preference number: 2 (lower is better)
Translates to: DSSTIRSEEQGLLAP*LAPTPETRGERGTP
Trigger: GGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTCCTCACTGCGGATGGTGCTGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTATCACCCGATGGCCATaGCCCAGAGAGGCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPITRWP*PREAGD
Trigger: GTCCCCAGCCTCTCTGGGGCATGGCCATCGGGTGAT...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCGCATCCTTCCTGTTTaGACCACCAGGGTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQRILPV*TTRVAE
Trigger: CTCGGCCACCCTGGTGGTGCAAACAGGAAGGATGCG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CAA 90 bp ACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTaGTCAGGCTGGGAGTTGTCCTCTGAGGACCACCACGCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: TEEANTEARRETQPS*SGWELSSEDHHAQS
Trigger: GGACTGGGCGTGGTGGTCCTCAGAGGACAACTCCCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGATGCCCCAGAGAGGCTaGGGACAGCAGCACCATCCG +
Preference number: 2 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQMPQRG*GQQHHP
Trigger: CGGATGGTGCTGCTGTCCCCAGCCTCTCTGGGGCAT...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR TCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTCCCCGCCTCTGTCCTaGGACGGACTCGGGGTCCGG +
Preference number: 2 (lower is better)
Translates to: ARASMASSSPGRGMFCKGSPPLS*DGLGVR
Trigger: CCGGACCCCGAGTCCGTCTCAGGACAGAGGCGGGGA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR GCA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCGGCAGGATCACCACATaGCCTGCAGGAGCAGTAGCC +
Preference number: 2 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVGRITT*PAGAVA
Trigger: GGCTACTGCTCCTGCAGGGCATGTGGTGATCCTGCC...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCTCGGCCCACGCGGGCTaGCCTGCTCTGGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVSAHAG*PALGQA
Trigger: TGCCTGTCCCAGAGCAGGCCAGCCCGCGTGGGCCGA...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTTTGCACCACCAGGGTaGCCGAGACCCCGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: ARASMASSSPGRGMFCKGFAPPG*PRPRPG
Trigger: GCCGGGGCGGGGTCTCGGCCACCCTGGTGGTGCAAA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR TCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCAGCACCATCCGCAGTaGGGAACAGGGCCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVQHHPQ*GTGPPS
Trigger: GCTAGGAGGCCCTGTTCCTCACTGCGGATGGTGCTG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR GCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCGAGCTCAGACCACTGTaGAGGCCAGTGACGGCCTGG +
Preference number: 2 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVELRPL*RPVTAW
Trigger: CCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTC...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGGGGTGGGGCTGAGCTaGAGCTCCGCGGCTGCTACT +
Preference number: 2 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTGVGLS*SSAAAT
Trigger: AGTAGCAGCCGCGGAGCTCCAGCTCAGCCCCACCCC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR TCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCACTGGGAGTTGTCCTCTaGGGACCACCACGCCCAGTC +
Preference number: 2 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPLGVVL*GPPRPV
Trigger: GACTGGGCGTGGTGGTCCTCAGAGGACAACTCCCAG...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR GCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCTGGAGCTCCGCGGCTaGTACTCCCGTGAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFLELRG*YSREAS
Trigger: GGAAGCCTCACGGGAGTAGCAGCCGCGGAGCTCCAG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCCCTCCTTGTCAGGCTaGGAGTTGTCCTCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVPSLSG*ELSSED
Trigger: GTCCTCAGAGGACAACTCCCAGCCTGACAAGGAGGG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGGCTACTCTGGGTTTTaGACGCAGCCTCGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: ARASMASSSPGRGMFCKGGYSGF*TQPRFP
Trigger: GGGAAACCGAGGCTGCGTCCAAAACCCAGAGTAGCC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCCCAGCGGGCTACTCTaGGTTTTGGACGCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTPSGLL*VLDAAS
Trigger: CGAGGCTGCGTCCAAAACCCAGAGTAGCCCGCTGGG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGATTCAAGTTAAGAGTTaGAATCACGCAGCTCCCATC +
Preference number: 2 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQIQVKS*NHAAPI
Trigger: GATGGGAGCTGCGTGATTCCAACTCTTAACTTGAAT...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTGGTCCTGGCTTTCTaGCTGTGGGCAGCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARVVLAF*LWAAER
Trigger: CCTCTCAGCTGCCCACAGCCAGAAAGCCAGGACCAC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CAA 90 bp GGCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTaGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: GPGFDGIIISRKGDV*QREPNLGRLHQRRS
Trigger: GCTTCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR GCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAGATCACCACATGCCCTaGAGGAGCAGTAGCCACTGC +
Preference number: 2 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPDHHMP*RSSSHC
Trigger: GCAGTGGCTACTGCTCCTGCAGGGCATGTGGTGATC...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAAGGACATCACCCGATaGCCATGCCCCAGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSKDITR*PCPREA
Trigger: AGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTT...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCACCCCACCTGGCCCTaGCAGGATCACCACATGCCC +
Preference number: 2 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLHPTWP*QDHHMP
Trigger: GGGCATGTGGTGATCCTGCCAGGGCCAGGTGGGGTG...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGAGCAGCAGCATCTTTaGCTAGAAGGACATCACCCG +
Preference number: 2 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSEQQHL*LEGHHP
Trigger: CGGGTGATGTCCTTCTAGCCAAAGATGCTGCTGCTC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAGTGCTGACTGCCTTCTaGCCGTCTCCCCCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSVLTAF*PSPPGQ
Trigger: CTGCCCAGGGGGAGACGGGCAGAAGGCAGTCAGCAC...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR GCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTGGAAGGGGGATGTTTTaGAAAGGGAACCCAATCTGG +
Preference number: 2 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFGRGMF*KGNPIW
Trigger: CCAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCC...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCCAGTCCTGAGCAATaGTCGCGGGGCCGAATCGGC +
Preference number: 2 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPSPEQ*SRGRIG
Trigger: GCCGATTCGGCCCCGCGACCATTGCTCAGGACTGGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR TCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACACCTTCTGTTTCCCTaGAGAGACCCGGCCTCCCTA +
Preference number: 2 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSHLLFP*RDPASL
Trigger: TAGGGAGGCCGGGTCTCTTCAGGGAAACAGAAGGTG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAGGAAAAGTAAACCACTaGCCCCCAGTTGAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSGKVNH*PPVEPG
Trigger: ACCTGGCTCAACTGGGGGGCAGTGGTTTACTTTTCC...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCTCTACAAAAACCCTaGACCAAATCCCACAGGATA +
Preference number: 2 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPLQKP*TKSHRI
Trigger: TATCCTGTGGGATTTGGTCCAGGGTTTTTGTAGAGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR GCA 72 bp GGGCCCTGGGGTGGGGCTGAGCTGGAGCTCCGCGGCTaGTACTCCCGTGAGGCTTCCTCCACGGTCCCTGTA +
Preference number: 3 (lower is better)
Translates to: GPWGGAELELRG*YSREASSTVPV
Trigger: TACAGGGACCGTGGAGGAAGCCTCACGGGAGTAGCAGCCGCGGAGCTCCAGCTCAGCCCCACCCCAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR GCA 72 bp CAGGATCACCACATGCCCTGCAGGAGCAGTAGCCACTaGCGCCACCATCGGCCCACGCGGGCTGGCCTGCTC +
Preference number: 3 (lower is better)
Translates to: QDHHMPCRSSSH*RHHRPTRAGLL
Trigger: GAGCAGGCCAGCCCGCGTGGGCCGATGGTGGCGGCAGTGGCTACTGCTCCTGCAGGGCATGTGGTGATCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTGGCCTCCTAGCGCCCTaGCTAGCACCTACTCCCGAG +
Preference number: 3 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPGLLAP*LAPTPE
Trigger: CTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR GCA 72 bp AGGAGGGTCCCTTCCACCCAAGAGCTCAGACCACTGTaGAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCT +
Preference number: 3 (lower is better)
Translates to: RRVPSTQELRPL*RPVTAWRGLAP
Trigger: AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTGGGTGGAAGGGACCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 72 bp TTTTGGACGCAGCCTCGGTTTCCCTGGGGCGGAGGCTaGGGCCAGGGAGTCGCCAAACAGACCCGACCCAGG +
Preference number: 3 (lower is better)
Translates to: FWTQPRFPWGGG*GQGVAKQTRPR
Trigger: CCTGGGTCGGGTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGCGTCCAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR TCA 72 bp GCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTaGCTTCACGTGCCCTGCAGAGATTCAGCCATGGGT +
Preference number: 3 (lower is better)
Translates to: ASDGLEGPGPYP*LHVPCRDSAMG
Trigger: ACCCATGGCTGAATCTCTGCAGGGCACGTGAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 72 bp GAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTaGGAGTTGTCCTCTGAGGACCACCACGCCCAGTCC +
Preference number: 3 (lower is better)
Translates to: EARRETQPSLSG*ELSSEDHHAQS
Trigger: GGACTGGGCGTGGTGGTCCTCAGAGGACAACTCCCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 72 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTaGAGGGGCCTGGCCCCTACCCGTGACTTCACGTGC +
Preference number: 3 (lower is better)
Translates to: QELRPLCRPVTA*RGLAPTRDFTC
Trigger: GCACGTGAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 72 bp GGCTACTCTGGGTTTTGGACGCAGCCTCGGTTTCCCTaGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAG +
Preference number: 3 (lower is better)
Translates to: GYSGFWTQPRFP*GGGWGQGVAKQ
Trigger: CTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGCGTCCAAAACCCAGAGTAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGGGCTACTCTGGGTTTaGGACGCAGCCTCGGTTTCC +
Preference number: 3 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQGLLWV*DAASVS
Trigger: GGAAACCGAGGCTGCGTCCAAAACCCAGAGTAGCCC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CAA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACTTGTCAGGCTGGGAGTaGTCCTCTGAGGACCACCAC +
Preference number: 3 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDLSGWE*SSEDHH
Trigger: GTGGTGGTCCTCAGAGGACAACTCCCAGCCTGACAA...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR TCA 72 bp GACTTCACGTGCCCTGCAGAGATTCAGCCATGGGTGTaGGCCACAGAGGAGGCCAATACGGAGGCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: DFTCPAEIQPWV*ATEEANTEARR
Trigger: CCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGAATCTCTGCAGGGCACGTGAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR TCA 72 bp TCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTaGGGAGGGTCCCTTCCACCCAAGAGCTCAGACCAC +
Preference number: 3 (lower is better)
Translates to: SPFSLQGATTIQ*GGSLPPKSSDH
Trigger: GTGGTCTGAGCTCTTGGGTGGAAGGGACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR TCA 72 bp AAAACCCTGGACCAAATCCCACAGGATAAACGGGACTaGGCCTCCAACCTCAGGCCGGGCCCAGGCGGGTCT +
Preference number: 3 (lower is better)
Translates to: KTLDQIPQDKRD*ASNLRPGPGGS
Trigger: AGACCCGCCTGGGCCCGGCCTGAGGTTGGAGGCTCAGTCCCGTTTATCCTGTGGGATTTGGTCCAGGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR GCA 72 bp CTGAGCCTCCAACCTCAGGCCGGGCCCAGGCGGGTCTaGACTCTCACCACGCCTGCTTTCTTCCTTTTTGTT +
Preference number: 3 (lower is better)
Translates to: LSLQPQAGPRRV*TLTTPAFFLFV
Trigger: AACAAAAAGGAAGAAAGCAGGCGTGGTGAGAGTGCAGACCCGCCTGGGCCCGGCCTGAGGTTGGAGGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CCA 72 bp TGTGCCTGCCAGGTCAGGCCCTGGCCCGGGCTTCGATaGCATCATCATCTCCAGGAAGGGGGATGTTTTGCA +
Preference number: 3 (lower is better)
Translates to: CACQVRPWPGLR*HHHLQEGGCFA
Trigger: TGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGCCAGGGCCTGACCTGGCAGGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CCA 72 bp CTTTACAAAACTCCTTCCACAGACGCCCGGGGCCTGTaGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGC +
Preference number: 3 (lower is better)
Translates to: LYKTPSTDARGL*RVTVWADAHSS
Trigger: GCTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CAA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAGGAGCAGCAGCATCTTaGGCTAGAAGGACATCACCC +
Preference number: 3 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPGAAAS*ARRTSP
Trigger: GGGTGATGTCCTTCTAGCCAAAGATGCTGCTGCTCC...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR CCA 72 bp CCAGGAAGGGGGATGTTTTGCAAAGGGAACCCAATCTaGGTAGACTGCACCAGCGAAGAAGCATCCCAAACA +
Preference number: 3 (lower is better)
Translates to: PGRGMFCKGNPI*VDCTSEEASQT
Trigger: TGTTTGGGATGCTTCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CCA 72 bp GACAGCCTCAAACAGTTAAGGCCTCTACAAAAACCCTaGACCAAATCCCACAGGATAAACGGGACTGAGCCT +
Preference number: 3 (lower is better)
Translates to: DSLKQLRPLQKP*TKSHRINGTEP
Trigger: AGGCTCAGTCCCGTTTATCCTGTGGGATTTGGTCCAGGGTTTTTGTAGAGGCCTTAACTGTTTGAGGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CAA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTTGGTGGATCAAGCATaGTTTCCCCACAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFLVDQA*FPHRKK
Trigger: TTTCTTTCTGTGGGGAAACAATGCTTGATCCACCAA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAAGGAAGGGGGATGTTTaGCAAAGGGAACCCAATCTG +
Preference number: 3 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSRKGDV*QREPNL
Trigger: CAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCCT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR TCA 72 bp TTTATTACTTTTATTGAGAACAGGAAGCCGCACACATaGCAATACAAAGTCACCGTTCTCCCTGCAAGGAGC +
Preference number: 3 (lower is better)
Translates to: FITFIENRKPHT*QYKVTVLPARS
Trigger: GCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAAAAGTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
3UTR-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAATAACTGATTTCCTGTaGAATCAGGTACGCTCCGTG +
Preference number: 3 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSITDFL*NQVRSV
Trigger: CACGGAGCGTACCTGATTCAACAGGAAATCAGTTAT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGGAACCTGGCTGGGGTaGCCTGCTGCCCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLGTWLG*PAARFL
Trigger: CAGGAAGCGGGCAGCAGGTCACCCCAGCCAGGTTCC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGAGGGGTCGATGGCCGTaGCAGCTGGGAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLRGRWP*QLGGQV
Trigger: CACCTGCCCTCCCAGCTGCCACGGCCATCGACCCCT...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGCGGGGCCTGGCTTCTaGATGCCCCGGACGTCGTAC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLAGPGF*MPRTSY
Trigger: GTACGACGTCCGGGGCATCCAGAAGCCAGGCCCCGC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCGGCAGCGCAGGCAGTaGAAGTGCGTGCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLRQRRQ*KCVLVP
Trigger: GGGCACCAGCACGCACTTCCACTGCCTGCGCTGCCG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGCAGGCCGGGCAGGGTaGCCACCACCTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPAGRAG*PPPPCP
Trigger: TGGGCAAGGAGGTGGTGGGCACCCTGCCCGGCCTGC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGCGCCTTCACGGCCTTaGCTAGGAAGGGCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLAPSRP*LGRARA
Trigger: AGCCCTCGCCCTTCCTAGGCAAGGCCGTGAAGGCGC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGGAAGTGCGTGCTGGTaGCCGAGAAGGGGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLGSACW*PRRGSR
Trigger: CCGACTGCCCCTTCTCGGGCACCAGCACGCACTTCC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCTGGAGCTCCGCGGCTaGTACTCCCGTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLLELRG*YSREAS
Trigger: GGAAGCCTCACGGGAGTAGCAGCCGCGGAGCTCCAG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGGGCACCGCCGTCCTTaGAGGGCTCCTCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPGHRRP*RAPPRG
Trigger: ACCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGGCCGCTGTCCTCCTTaGAGGCTGCCCCGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLGRCPP*RLPRPN
Trigger: ATTCGGACGGGGCAGCCTCCAAGGAGGACAGCGGCC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGAACCTTGGCGGGGCCTaGCTTCTGGATGCCCCGGAC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLNLGGA*LLDAPD
Trigger: GTCCGGGGCATCCAGAAGCCAGGCCCCGCCAAGGTT...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGTACCCACGGGGGTGCTaGAGCAGCTCCGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLYPRGC*SSSGPW
Trigger: CCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTA...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGACGCCCGGGGCCTGTaGCGGGTCACTGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPDARGL*RVTVWA
Trigger: TGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGGCCTGGCTTCTGGATaGCCCGGACGTCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLGLASG*PGRRTW
Trigger: CCAAGTACGACGTCCGGGGCATCCAGAAGCCAGGCC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCCCCGAGGAGCGGATGTaGCGGCGCTCATGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPPEERM*RRSCLR
Trigger: GCGCAAGCATGAGCGCCGGCACATCCGCTCCTCGGG...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGGCCTGGGGCGCCGGTaGTCTCACCGGGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDGLGRR*SHRVPA
Trigger: AGCCGGAACCCGGTGAGAGCACCGGCGCCCCAGGCC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGGGTATCCTCGGAGGTaGGCAGCATGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLGYPRR*AAWRRW
Trigger: CCACCTCCTCCATGCTGCCCACCTCCGAGGATACCC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCCTCGGTGGCGGCAGTaGCGGCAGCCAGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGPRWRQ*RQPGTQ
Trigger: CTGCGTCCCTGGCTGCCGCCACTGCCGCCACCGAGG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGTCCTGGGAGGCTTCGTaGGGGCCTGGGGCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGSWEAS*GPGAPV
Trigger: CACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGA...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGTCTAGACTGCGGTCCTaGGAGGCTTCGTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLSRLRS*EASWGP
Trigger: AGGCCCCCACGAAGCCTCCCAGGACCGCAGTCTAGA...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGGCAGCCACGGGGGCTaGGTCTCCAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGGSHGG*VSSSRG
Trigger: GCCTCGGGAGCTGGAGACTCAGCCCCCGTGGCTGCC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCGCATGAAGCCGTGCTaGAGGGAGTTGTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLRMKPC*RELSRF
Trigger: GAAGCGCGACAACTCCCTGCAGCACGGCTTCATGCG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGATGGAGGCGGGTGGTaGCGGGACAGAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDDGGGW*RDRGGS
Trigger: GCTGCCGCCTCTGTCCCGGCACCACCCGCCTCCATC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGATGGTGGAAGCCAGCTaGTTCCAGGCGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLMVEAS*FQASRV
Trigger: CACCCTGCTCGCCTGGAAGCAGCTGGCTTCCACCAT...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGTTTGAAGCCATTGGCTaGCCGCCGCTCCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLFEAIG*PPLRLL
Trigger: GAGAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAAA...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGACGCGGTCGTGGTGCTaGGCGTGCTTGTACATGTGC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLTRSWC*ACLYMC
Trigger: GCACATGTACAAGCACGCGCAGCACCACGACCGCGT...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGGGGCACCGCCGTCCTTaGAGGGCTCCTCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SALASTYSRDARGTRDSRGHRRP*RAPPRG
Trigger: ACCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCC...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGGTGCGGGAGCCAGGCTaGGGGTGGGCGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGVREPG*GWAEPW
Trigger: CCAAGGTTCCGCCCACCCCCAGCCTGGCTCCCGCAC...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACTGGGCAGGCCCGAGTTaGAGAGGGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDWAGPS*RGPGPG
Trigger: CCCTGGCCCTGGCCCTCTCCAACTCGGGCCTGCCCA...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCAGGCCAGTGACGGCCTaGAGGGGCCTGGCCCCTACC +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFRPVTA*RGLAPT
Trigger: GGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCT...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGACGTCCTGTTTGCCGTaGTGCTTGCGATGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLTSCLP*CLRCAV
Trigger: CACGGCGCATCGCAAGCACCACGGCAAACAGGACGT...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGTGGTCCTGGCTTTCTaGCTGTGGGCAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLVVLAF*LWAAER
Trigger: CCTCTCAGCTGCCCACAGCCAGAAAGCCAGGACCAC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGGCGAGGCGGGCAGGTaGGGCACTGACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGGEAGR*GTDAGI
Trigger: GATCCCAGCGTCAGTGCCTCACCTGCCCGCCTCGCC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGGCGAGGCGGGCAGGTaGGGCACTGACGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQGEAGR*GTDAGI
Trigger: GATCCCAGCGTCAGTGCCTCACCTGCCCGCCTCGCC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTCACTGTGCAGGCCAGTaGCGGCCTGGAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPHCAGQ*RPGGAW
Trigger: CCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTG...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGGTCTTCCTCATCGCTaGACCCCTGGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPGLPHR*TPGAAP
Trigger: TGGTGCAGCCCCAGGGGTGCAGCGATGAGGAAGACC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGAGGGCTCCTCCGCGTaGTCTTCCTCATCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPEGSSA*SSSSLH
Trigger: GTGCAGCGATGAGGAAGACCACGCGGAGGAGCCCTC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCCTCGGTCTTGGTGCTaGGGGCCGGCCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGPRSWC*GPARRA
Trigger: AGCTCTCCTGGCCGGCCCCCAGCACCAAGACCGAGG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGAGGTTTGGTGGCACTaGGCCCAGCCTCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDEVWWH*AQPRWR
Trigger: CCGCCACCGAGGCTGGGCCCAGTGCCACCAAACCTC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACTGGGGAAGTAGGGCGTaGGGGTGGGCAGGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDWGSRA*GWAGPS
Trigger: ACTCGGGCCTGCCCACCCCCACGCCCTACTTCCCCA...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCCATGATGGAGGCGGGTaGTGCCGGGACAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFHDGGG*CRDRGG
Trigger: GCCGCCTCTGTCCCGGCACCACCCGCCTCCATCATG...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGGGCCATGGGAGGTTTaGTCTCGGCGGCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQGPWEV*SRRPRP
Trigger: CGGCCTCGGCCGCCGAGACCAAACCTCCCATGGCCC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTCGGCCCACGCGGGCTaGCCTGCTCTGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPSAHAG*PALGQA
Trigger: TGCCTGTCCCAGAGCAGGCCAGCCCGCGTGGGCCGA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCGGAACTCGCAGTGCTaGTTGGGACAGAGACACTGC +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLRNSQC*LGQRHC
Trigger: GCAGTGTCTCTGTCCCAACCAGCACTGCGAGTTCCG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTCGAGGAGGCCTCTCCTaGAGCCTGCCTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPRGGLS*SLPGAG
Trigger: CCCAGCACCAGGCAGGCTTCAGGAGAGGCCTCCTCG...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCGAGGAGGCCTCTCCTaGAGCCTGCCTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQRGGLS*SLPGAG
Trigger: CCCAGCACCAGGCAGGCTTCAGGAGAGGCCTCCTCG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCCACCTTGCCTGTCTTaGAGGCGATGGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGPPCLS*RRWPRP
Trigger: TGGGCGGGGCCATCGCCTTCAAGACAGGCAAGGTGG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGTCCATTCCAACACGTaGTGCTGGGGAGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLVHSNT*CWGVAG
Trigger: TCCTGCAACTCCCCAGCAGCACGTGTTGGAATGGAC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGGGGTGGAGCCCGCGTaGAGCTTCTCAAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPGVEPA*SFSKLI
Trigger: GATCAGCTTTGAGAAGCTGCACGCGGGCTCCACCCC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGCTCCTCGGTCTTGGTaGTGGGGGCCGGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGAPRSW*WGPARR
Trigger: TCTCCTGGCCGGCCCCCAGCACCAAGACCGAGGAGC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGCAGGCCGGGCAGGGTaGCCACCACCTCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWAGRAG*PPPPCP
Trigger: TGGGCAAGGAGGTGGTGGGCACCCTGCCCGGCCTGC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGTGGCGGATCACGTCCTaGTTACTCGTGAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLWRITS*LLVNLW
Trigger: CCAGAGGTTCACGAGTAAGCAGGACGTGATCCGCCA...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCCACAGGCAGGGAGGTaGTCCCACGGCCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDPQAGR*SHGQPV
Trigger: TACTGGCTGGCCGTGGGAGCACCTCCCTGCCTGTGG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTCCACGCGGGCTGGCCTaGTCTGGGACAGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPPRGLA*SGTGSE
Trigger: CTCACTGCCTGTCCCAGAGCAGGCCAGCCCGCGTGG...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGGCAGCCCTCCCGGATaGAGTGGAAGTGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPGSPPG*SGSGCS
Trigger: TGAACAGCCACTTCCACTGCATCCGGGAGGGCTGCC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCTCGTGGTGCTGCGCGTaGTTGTACATGTGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPSWCCA*LYMCVR
Trigger: GCGCACGCACATGTACAAGCACGCGCAGCACCACGA...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCTCCACGCGGTCGTGGTaGTGCGCGTGCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPSTRSW*CACLYM
Trigger: CATGTACAAGCACGCGCAGCACCACGACCGCGTGGA...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGGCAGTGGAAGTGCGTaGTGGTGCCCGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDGSGSA*WCPRRG
Trigger: GCCCCTTCTCGGGCACCAGCACGCACTTCCACTGCC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAAGGGGTCGATGGCCGTaGCAGCTGGGAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGRGRWP*QLGGQV
Trigger: CACCTGCCCTCCCAGCTGCCACGGCCATCGACCCCT...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGTCCCGGGGCTGCGATaGGCTGCCCTCCGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWVPGLR*AALRVG
Trigger: TCCCACACGGAGGGCAGCCCATCGCAGCCCCGGGAC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGGGCCGCTGTCCTCCTTaGAGGCTGCCCCGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: SALASTYSRDARGTRDSRGRCPP*RLPRPN
Trigger: ATTCGGACGGGGCAGCCTCCAAGGAGGACAGCGGCC...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCCTCCTGAAGCCTGCCTaGTGCTGGGGCCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFLLKPA*CWGRCP
Trigger: AGGACAGCGGCCCCAGCACCAGGCAGGCTTCAGGAG...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCCCGCTCCTCGGTCTTaGTGCTGGGGGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQPAPRS*CWGPAR
Trigger: CCTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGCCTTGGTCTCCAGGTaGGCCGTGCTGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQALVSR*AVLLGS
Trigger: GCTGCCCAGCAGCACGGCCCACCTGGAGACCAAGGC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGAGCCAGGCTGGGGGTaGGCGGAACCTTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQEPGWG*AEPWRG
Trigger: GCCCCGCCAAGGTTCCGCCCACCCCCAGCCTGGCTC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCCTCGGTGGCGGCAGTaGCGGCAGCCAGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQPRWRQ*RQPGTQ
Trigger: CTGCGTCCCTGGCTGCCGCCACTGCCGCCACCGAGG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTGGGGAAGTAGGGCGTaGGGGTGGGCAGGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPWGSRA*GWAGPS
Trigger: ACTCGGGCCTGCCCACCCCCACGCCCTACTTCCCCA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGTCCTGGGAGGCTTCGTaGGGGCCTGGGGCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQSWEAS*GPGAPV
Trigger: CACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGA...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCAGAGGACATGGCGCCTaGGCTGCAGCCAGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPRGHGA*AAASVV
Trigger: GACTACACTGGCTGCAGCCCAGGCGCCATGTCCTCT...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCAGTGGAAGTGCGTGCTaGTGCCCGAGAAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPSGSAC*CPRRGS
Trigger: ACTGCCCCTTCTCGGGCACCAGCACGCACTTCCACT...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCCAGTTCGGGTGGTCCTaGCTTTCTGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPQFGWS*LSGCGQ
Trigger: CTGCCCACAGCCAGAAAGCCAGGACCACCCGAACTG...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCTGGGGCGGCTTTGGGTaGCTTTCCAAGTCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFWGGFG*LSKSGG
Trigger: TCCCCCGGACTTGGAAAGTCACCCAAAGCCGCCCCA...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCCTCCGCTTCCGCCTTaGTGTTCAGCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SALASTYSRDARGTRDSRPPLPP*CSAGCP
Trigger: TGGGCAGCCTGCTGAACATCAAGGCGGAAGCGGAGG...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCCCCGTCCAAGGTGCTaGAGAGCGCGCCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQPRPRC*RARRIP
Trigger: AGGAATGCGGCGCGCTCTTCAGCACCTTGGACGGGG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGACAGACTCAGGGCCACTaGGCTCTTGGTCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGQTQGH*ALGPGA
Trigger: AGCCCCGGGACCAAGAGCGCAGTGGCCCTGAGTCTG...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCAGACTCAGGGCCACTaGGCTCTTGGTCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQQTQGH*ALGPGA
Trigger: AGCCCCGGGACCAAGAGCGCAGTGGCCCTGAGTCTG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCAACACGGGTGTGGGTaGCGGCTCCTCGCTGTACTC +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGQHGCG*RLLAVL
Trigger: GAGTACAGCGAGGAGCCGGCACCCACACCCGTGTTG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTCTGAAGCCTGCCTGGTaGTGGGGCCGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPLKPAW*WGRCPP
Trigger: AGGAGGACAGCGGCCCCAGCACCAGGCAGGCTTCAG...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCCGGGCTACCAGGTTCTaGATCTGGACACTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPRATRF*IWTLLC
Trigger: GCACAGCAGTGTCCAGATGCAGAACCTGGTAGCCCG...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCGGCCTGGCTTCTGGATaGCCCGGACGTCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFGLASG*PGRRTW
Trigger: CCAAGTACGACGTCCGGGGCATCCAGAAGCCAGGCC...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGCAGCCCCGAGATCTTaGTGTTGGGAGGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPAAPRS*CWEVWW
Trigger: CCACCAAACCTCCCAACAGCAAGATCTCGGGGCTGC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTCCACAGGCAGGGAGGTaGTCCCACGGCCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPPQAGR*SHGQPV
Trigger: TACTGGCTGGCCGTGGGAGCACCTCCCTGCCTGTGG...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGCTGGGGTGACCTGCTaGCCGCTTCCTGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDAGVTC*PLPGSK
Trigger: CTTTGACCCAGGAAGCGGGCAGCAGGTCACCCCAGC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCCTTTGTACCAAACCTaGGCAGGTACACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLPLYQT*AGTPSR
Trigger: CCTGGAAGGTGTACCTGCGCAGGTTTGGTACAAAGG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTAGGAGCAGTAGCCACTaGCGCCACCATCGGCCCACG +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPRSSSH*RHHRPT
Trigger: CGTGGGCCGATGGTGGCGGCAGTGGCTACTGCTCCT...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCGAGAACTGACAAGCTaGGTCCTTGCAGTCCTCGTA +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLRELTS*VLAVLV
Trigger: TACGAGGACTGCAAGGACGCAGCTTGTCAGTTCTCG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGGGGAGGATCCTAGCTaGATGAGGGAGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQGEDPS*MREAPP
Trigger: TGGCGGGGCCTCCCTCATGCAGCTAGGATCCTCCCC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGTCCCGGGGCTGCGATaGGCTGCCCTCCGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQVPGLR*AALRVG
Trigger: TCCCACACGGAGGGCAGCCCATCGCAGCCCCGGGAC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTGCAGGATGGTGGCCTTaGTCTCCAGGTGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPAGWWP*SPGGPC
Trigger: GCACGGCCCACCTGGAGACCAAGGCCACCATCCTGC...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGGGAGGCGCTCAGGCTaGAGTTCTTGCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDGRRSG*SSCCSG
Trigger: CCCTGAGCAGCAAGAACTCCAGCCTGAGCGCCTCCC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGACGCAGAGGACTGCTaGCTGGTAGGGGAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQDAEDC*LVGEAL
Trigger: GAGCGCCTCCCCTACCAGCCAGCAGTCCTCTGCGTC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCTGCTGCCCGCTTCCTaGGTCAAAGGTGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGLLPAS*VKGGRG
Trigger: CCCTCTGCCACCTTTGACCCAGGAAGCGGGCAGCAG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGACACCCCACCTGGCCCTaGCAGGATCACCACATGCCC +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGHPTWP*QDHHMP
Trigger: GGGCATGTGGTGATCCTGCCAGGGCCAGGTGGGGTG...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGGGCAGTCGGCGAAGTaGCAGCTGAGTGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDGQSAK*QLSEAL
Trigger: CAAGGCCTCACTCAGCTGCCACTTCGCCGACTGCCC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTGCCAGGTCAGGCCCTaGCCCGGGCTTCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQCQVRP*PGLRWH
Trigger: ATGCCATCGAAGCCCGGGCCAGGGCCTGACCTGGCA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACTGGGGAGGAGGCTTCTaGATGACAGCCTCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDWGGGF*MTASPP
Trigger: TGGCGGGGAGGCTGTCATCCAGAAGCCTCCTCCCCA...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCACCGCGCCCGCTTGCTaGGGGTATCCTCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVTAPAC*GYPRRW
Trigger: CCACCTCCGAGGATACCCTCAGCAAGCGGGCGCGGT...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGACTTGTAGAACTTCTTaGAGCCGTCCTTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLTCRTS*SRPWRR
Trigger: CCTACGCCAAGGACGGCTTCAAGAAGTTCTACAAGT...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGACTGCGTGGCCATTTaGTTCGTTGCTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPDCVAI*FVAGLL
Trigger: AAGGAGCCCAGCAACGAATCAAATGGCCACGCAGTC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCCTCCGCTTCCGCCTTaGTGTTCAGCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQPPLPP*CSAGCP
Trigger: TGGGCAGCCTGCTGAACATCAAGGCGGAAGCGGAGG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGGAAGTTTGCGTGCTTaGTGGCCCCGTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDGSLRA*WPRPRC
Trigger: GCACCTTGGACGGGGCCATCAAGCACGCAAACTTCC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGGGAGGAATCCGGGTTTaGCCTGGGGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGGGIRV*PGAWRS
Trigger: AGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCC...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGACTGGGAGTTGTCCTCTaGGGACCACCACGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGLGVVL*GPPRPV
Trigger: GACTGGGCGTGGTGGTCCTCAGAGGACAACTCCCAG...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGAGGATCCTAGCTGCATaGGGGAGGCCCCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQRILAA*GRPRQR
Trigger: CCGCTGGCGGGGCCTCCCTCATGCAGCTAGGATCCT...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCGGCTGCTACTCCCGTaGGGCTTCCTCCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQRLLLP*GFLHGP
Trigger: GGGACCGTGGAGGAAGCCTCACGGGAGTAGCAGCCG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCAACACGGGTGTGGGTaGCGGCTCCTCGCTGTACTC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQQHGCG*RLLAVL
Trigger: GAGTACAGCGAGGAGCCGGCACCCACACCCGTGTTG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCGTCCTCCTTGGAGGCTaGCCCGTCCGAATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFVLLGG*PVRILL
Trigger: GAGAAGGATTCGGACGGGGCAGCCTCCAAGGAGGAC...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCATCTGGACACTGCTGTaGGACGGCAGGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFIWTLL*DGRGRM
Trigger: CATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGAT...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGTGGATGTGGCCACAGTaGTGGCTGCCCGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGWMWPQ*WLPENL
Trigger: CAGGTTCTCGGGCAGCCAGCACTGTGGCCACATCCA...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACACTGGCAGTCGGCTGTaGCACAGTCTTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDTGSRL*HSLRWL
Trigger: GAGCCACCGAAGACTGTGGCACAGCCGACTGCCAGT...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGAGGGACGCAGAGGACTaGTGGCTGGTAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWRDAED*WLVGEA
Trigger: CGCCTCCCCTACCAGCCAGCAGTCCTCTGCGTCCCT...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGCTGGGGTGACCTGCTaGCCGCTTCCTGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGAGVTC*PLPGSK
Trigger: CTTTGACCCAGGAAGCGGGCAGCAGGTCACCCCAGC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGCGCCTTCACGGCCTTaGCTAGGAAGGGCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWAPSRP*LGRARA
Trigger: AGCCCTCGCCCTTCCTAGGCAAGGCCGTGAAGGCGC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCCCTGCTTCTCGTGCTTaGGCTTGTGCGAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPPASRA*ACASPS
Trigger: AGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGG...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTTCTCCACCACCACCTaGCGGCTCAGCTTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQFSTTT*RLSLAQ
Trigger: CTGCGCCAAGCTGAGCCGCCAGGTGGTGGTGGAGAA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGCCCCAACACGGGTGTaGGTGCCGGCTCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQAPTRV*VPAPRC
Trigger: ACAGCGAGGAGCCGGCACCCACACCCGTGTTGGGGC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCGGGTGGGCGGAACCTTaGCGGGGCCTGGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVGWAEP*RGLASG
Trigger: TCCAGAAGCCAGGCCCCGCCAAGGTTCCGCCCACCC...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACCGTGCTCCGTGTCCTTaGCGCCCAGCAGCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDRAPCP*RPAARA
Trigger: CGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACG...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGGGAGGCGCTCAGGCTaGAGTTCTTGCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGGRRSG*SSCCSG
Trigger: CCCTGAGCAGCAAGAACTCCAGCCTGAGCGCCTCCC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGATGTTGGGAGGTTTGGTaGCACTGGGCCCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGCWEVW*HWAQPR
Trigger: CCGAGGCTGGGCCCAGTGCCACCAAACCTCCCAACA...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCTGCTGTTGGGAGGTTTaGTGGCACTGGGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFCCWEV*WHWAQP
Trigger: AGGCTGGGCCCAGTGCCACCAAACCTCCCAACAGCA...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCATGATGGAGGCGGGTaGTGCCGGGACAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQHDGGG*CRDRGG
Trigger: GCCGCCTCTGTCCCGGCACCACCCGCCTCCATCATG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGGGACGAGGGGGCCATaGGAGGTTTGGTCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQGTRGP*EVWSRR
Trigger: CCGCCGAGACCAAACCTCCCATGGCCCCCTCGTCCC...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGCGCTGGAGCTGAACTaGCAGAAGCCCGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQALELN*QKPAAL
Trigger: CAGCGCCGCGGGCTTCTGCCAGTTCAGCTCCAGCGC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCCATCATGGGCGAGATaGGGCCCTTGCTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDPSWAR*GPCLQR
Trigger: TCTCTGCAAGCAAGGGCCTCATCTCGCCCATGATGG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGGAAGTTTGCGTGCTTaGTGGCCCCGTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGGSLRA*WPRPRC
Trigger: GCACCTTGGACGGGGCCATCAAGCACGCAAACTTCC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGTGCCCACCACCTCCTTaGCCACCCGCTCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQCPPPP*PPAPRS
Trigger: AGACCGAGGAGCGGGTGGGCAAGGAGGTGGTGGGCA...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCGGCCACAGTGCTGGCTaGCCGAGAACCTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFGHSAG*PRTWQY
Trigger: ATATTGCCAGGTTCTCGGGCAGCCAGCACTGTGGCC...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCAACAAGGTCGTCGTTaGTGGACTCCTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SALASTYSRDARGTRDSRQQGRR*WTPRAP
Trigger: CGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTG...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCAACAAGGTCGTCGTTaGTGGACTCCTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDQQGRR*WTPRAP
Trigger: CGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGGCAGCCCCGAGATCTTaGTGTTGGGAGGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SALASTYSRDARGTRDSRAAPRS*CWEVWW
Trigger: CCACCAAACCTCCCAACAGCAAGATCTCGGGGCTGC...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCAGTCAGGTCTAGACTaGGGTCCTGGGAGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDQSGLD*GPGRLR
Trigger: ACGAAGCCTCCCAGGACCGCAGTCTAGACCTGACTG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCTGCCCAGGCCAGGGTTaGCCTGAGACATCTTATTCA +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPCPGQG*PETSYS
Trigger: TGAATAAGATGTCTCAGGGCAACCCTGGCCTGGGCA...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCGCTCCGCCTTCTCATaGTTCTTGATGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDRSAFS*FLMCQG
Trigger: CCCCTGGCACATCAAGAAGCATGAGAAGGCGGAGCG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGACATGGCGCCTGGGCTaGAGCCAGTGTAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQTWRLG*SQCSPC
Trigger: GCATGGACTACACTGGCTGCAGCCCAGGCGCCATGT...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCGTTACCCACGGGGGTaGTGGAGCAGCTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQRYPRG*WSSSGP
Trigger: TGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCCCCAACACGGGTGTaGGTGCCGGCTCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDAPTRV*VPAPRC
Trigger: ACAGCGAGGAGCCGGCACCCACACCCGTGTTGGGGC...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGGGTATCCTCGGAGGTaGGCAGCATGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWGYPRR*AAWRRW
Trigger: CCACCTCCTCCATGCTGCCCACCTCCGAGGATACCC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGCAGGATGGTGGCCTTaGTCTCCAGGTGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQAGWWP*SPGGPC
Trigger: GCACGGCCCACCTGGAGACCAAGGCCACCATCCTGC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCGGGGCCTGGCTTCTaGATGCCCCGGACGTCGTAC +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDAGPGF*MPRTSY
Trigger: GTACGACGTCCGGGGCATCCAGAAGCCAGGCCCCGC...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGGGGCACTGGGCACGCTaGCGAGGGGTGCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWGHWAR*RGVREP
Trigger: TGGCTCCCGCACCCCTCGCCAGCGTGCCCAGTGCCC...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCAAGGTCGTCGTTGCTaGACTCCTCGTGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDQGRRC*TPRAPC
Trigger: ACACGGAGCACGAGGAGTCCAGCAACGACGACCTTG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTGCTGTTGGGAGGTTTaGTGGCACTGGGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQCCWEV*WHWAQP
Trigger: AGGCTGGGCCCAGTGCCACCAAACCTCCCAACAGCA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCACGGCCAGCCAGTATaGGGAAGTAGGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQHGQPV*GSRAWG
Trigger: CCCCCACGCCCTACTTCCCCATACTGGCTGGCCGTG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCAATCCGGGTTTGACCTaGGGCTTGGCGTTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPNPGLT*GLAFSR
Trigger: TCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATT...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGGAAGTGGAACTTGTTaGCGTACTTGCAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPGSGTC*RTCSPW
Trigger: CCACGGACTGCAAGTACGCCAACAAGTTCCACTTCC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGGGTGCTCTTCCCATTaGGGTGGCAGCCGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWGCSSH*GGSRGS
Trigger: ACTACCACGGCTGCCACCTCAATGGGAAGAGCACCC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCAGAGATCCTCTCCATaGTGGAGGCGGGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQQRSSP*WRRVVP
Trigger: CGGCACCACCCGCCTCCATCATGGAGAGGATCTCTG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAACTGACGCTGGGATCTaGGGCATCTGGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGTDAGI*GIWGMV
Trigger: CACCATACCCCAGATGCCTCAGATCCCAGCGTCAGT...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGGGCAGGTGAGGCACTaGCGCTGGGATCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQGQVRH*RWDLRH
Trigger: ATGCCTCAGATCCCAGCGTCAGTGCCTCACCTGCCC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTCATTCCAACACGTGCTaGTGGGGAGTTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPHSNTC*WGVAGA
Trigger: GGCTCCTGCAACTCCCCAGCAGCACGTGTTGGAATG...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCGGGGCTGCGATGGGCTaGCCTCCGTGTGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVGAAMG*PPCGSR
Trigger: CCGGCTCCCACACGGAGGGCAGCCCATCGCAGCCCC...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTAAACGCATGAAGCCGTaGTGCAGGGAGTTGTCGCGC +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPKRMKP*CRELSR
Trigger: GCGCGACAACTCCCTGCAGCACGGCTTCATGCGTTT...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGTTGCTGGACTCCTCGTaGTCCGTGTCCTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQLLDSS*SVSLAP
Trigger: GGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAA...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGATGAGGCCCTTGCTTaGAGAGATCCTCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPDEALA*RDPLHD
Trigger: ATCATGGAGAGGATCTCTGCAAGCAAGGGCCTCATC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAAGAGCTCAGACCACTGTaGAGGCCAGTGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EQGLLAPLLAPTPETRGEELRPL*RPVTAW
Trigger: CCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTC...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCGCAGGCAGTGGAAGTaGGTGCTGGTGCCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQRRQWK*VLVPEK
Trigger: CTTCTCGGGCACCAGCACGCACTTCCACTGCCTGCG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAATGTGTGTGTTTGGGATaGAGCGCCGCGGGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: EQGLLAPLLAPTPETRGECVCLG*SAAGAH
Trigger: ATGCGCGCCCGCGGCGCTCCATCCCAAACACACACA...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCACTTGGGGCGGCTTTaGGTGACTTTCCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQHLGRL*VTFQVR
Trigger: CCGGACTTGGAAAGTCACCCAAAGCCGCCCCAAGTG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCCTGGCGGCTCAGCTTaGCGCAGATGGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQPGGSA*RRWRSA
Trigger: AGCTGAACGCCATCTGCGCCAAGCTGAGCCGCCAGG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGTTCTCCACCACCACCTaGCGGCTCAGCTTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQFSTTT*RLSLAQ
Trigger: CTGCGCCAAGCTGAGCCGCCAGGTGGTGGTGGAGAA...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGCGAGGAACTCGGTCATaGTGGAGGCCGCGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQRGTRS*WRPRSP
Trigger: GGGACTACGCGGCCTCCACCATGACCGAGTTCCTCG...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCGAGCCAGGCTGGGGGTaGGCGGAACCTTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVEPGWG*AEPWRG
Trigger: GCCCCGCCAAGGTTCCGCCCACCCCCAGCCTGGCTC...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGTGGCTCGGAAGCGCTaGAAGCCGTCGTTAATGAGC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQVARKR*KPSLMS
Trigger: GCTCATTAACGACGGCTTCCAGCGCTTCCGAGCCAC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCTGCAGTGGAAGTGCGTaGTCTTCTGTCCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPCSGSA*SSVRRT
Trigger: AGTTCTACGGACAGAAGACCACGCACTTCCACTGCA...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCTGGAGGAAGTCACACTaGCCGTCACAGAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPWRKSH*PSQKSF
Trigger: AAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCA...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGCATCTGGGGTATGGTaGAAGCCAGCTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGASGVW*KPAASR
Trigger: CCTGGAAGCAGCTGGCTTCCACCATACCCCAGATGC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGCATCTGGGGTATGGTaGAAGCCAGCTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQASGVW*KPAASR
Trigger: CCTGGAAGCAGCTGGCTTCCACCATACCCCAGATGC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACAGCTCCGGTCCATGGTaGATGACTCAGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDSSGPW*MTQRTW
Trigger: CCATGTCCTCTGAGTCATCCACCATGGACCGGAGCT...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CAA 72 bp GCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTaGTCAGGCTGGGAGTTGTCCTCTGAGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: ANTEARRETQPS*SGWELSSEDHH
Trigger: GTGGTGGTCCTCAGAGGACAACTCCCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTGCAGCTTCTCAAAGCTaGTCTTCCTGGCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPAASQS*SSWPAR
Trigger: ACGAGCTGGCCAGGAAGATCAGCTTTGAGAAGCTGC...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGGCAGCCACGGGGGCTaGGTCTCCAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARGSHGG*VSSSRG
Trigger: GCCTCGGGAGCTGGAGACTCAGCCCCCGTGGCTGCC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACCAGCACCATCCGCAGTaGGGAACAGGGCCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDQHHPQ*GTGPPS
Trigger: GCTAGGAGGCCCTGTTCCTCACTGCGGATGGTGCTG...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCAGGATAAACGGGACTaGGCCTCCAACCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQQDKRD*ASNLRP
Trigger: CGGCCTGAGGTTGGAGGCTCAGTCCCGTTTATCCTG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGGTCTTCCTCATCGCTaGACCCCTGGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDGLPHR*TPGAAP
Trigger: TGGTGCAGCCCCAGGGGTGCAGCGATGAGGAAGACC...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCTCTCCAGGTGGGCCGTaGTGCTGGGCAGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVSPGGP*CWAAAG
Trigger: GCCTGCGGCTGCCCAGCAGCACGGCCCACCTGGAGA...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCTACAGCCCACCTGCATaGAGTGATAGTGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFYSPPA*SDSGCS
Trigger: AGAGCACCCACTATCACTGCATGCAGGTGGGCTGTA...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCGATGGAGGCGGGTGGTaGCGGGACAGAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVDGGGW*RDRGGS
Trigger: GCTGCCGCCTCTGTCCCGGCACCACCCGCCTCCATC...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGATCACCACATGCCCTaGAGGAGCAGTAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWDHHMP*RSSSHC
Trigger: GCAGTGGCTACTGCTCCTGCAGGGCATGTGGTGATC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTCGTGCTTGCGCTTGTaGGAGTCCATCTGCGACATG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQSCLRL*ESICDM
Trigger: CATGTCGCAGATGGACTCGCACAAGCGCAAGCACGA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCCGGCGGCCGCCGACTaGAGGAAGAGCAGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARPAAAD*RKSSEP
Trigger: GGGCTCGCTGCTCTTCCTGCAGTCGGCGGCCGCCGG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACCCTGGCGGCTCAGCTTaGCGCAGATGGCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDPGGSA*RRWRSA
Trigger: AGCTGAACGCCATCTGCGCCAAGCTGAGCCGCCAGG...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGATGTGGCCACAGTGCTaGCTGCCCGAGAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQMWPQC*LPENLA
Trigger: TGCCAGGTTCTCGGGCAGCCAGCACTGTGGCCACAT...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCCCGGCGCGGATGCAGTaGAAGTGGTTGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVPARMQ*KWLVAL
Trigger: CAAGGCTACCAACCACTTCCACTGCATCCGCGCCGG...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGCCGAGGCGACCAGCGTaGGTGTGTCAGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWPRRPA*VCQGWL
Trigger: CAGCCACCCCTGACACACCCACGCTGGTCGCCTCGG...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGGCTTCGTGGGGGCCTaGGGCGCCGGTGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARGFVGA*GAGALT
Trigger: GGTGAGAGCACCGGCGCCCCAGGCCCCCACGAAGCC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGTTTGCCGGGACTGCGTaGCCATTTGATTCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGFAGTA*PFDSLL
Trigger: CAGCAACGAATCAAATGGCCACGCAGTCCCGGCAAA...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAACCACGCAGTGGAAGTaGGCCTTGTGGAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGTTQWK*ALWRKS
Trigger: TGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGT...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCAAGGATCGTTCTCCTaGAACTGGAGGAATCCGGGT +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDQGSFS*NWRNPG
Trigger: ACCCGGATTCCTCCAGTTCCAGGAGAACGATCCTTG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGTTGTCCACGCGGTCGTaGTGCTGCGCGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQLSTRS*CCACLY
Trigger: GTACAAGCACGCGCAGCACCACGACCGCGTGGACAA...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCCTCCTGGAGACCTCTaGGGAGGAGGCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQPPGDL*GGGFWM
Trigger: CATCCAGAAGCCTCCTCCCCAGAGGTCTCCAGGAGG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCGTCCTGCTTACTCGTaGACCTCTGGTAGTTACACT +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGRPAYS*TSGSYT
Trigger: AGTGTAACTACCAGAGGTTCACGAGTAAGCAGGACG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCCCATCATGGGCGAGATaGGGCCCTTGCTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVPSWAR*GPCLQR
Trigger: TCTCTGCAAGCAAGGGCCTCATCTCGCCCATGATGG...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGAGGCCAGGGTTGCCCTaGGACATCTTATTCATAAGC +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGRPGLP*DILFIS
Trigger: GCTTATGAATAAGATGTCTCAGGGCAACCCTGGCCT...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACTCTGCCAACTTCTCCTaGACCAGCGCCTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDSANFS*TSAFTA
Trigger: GGCCGTGAAGGCGCTGGTTCAGGAGAAGTTGGCAGA...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGCCCCGTCCAAGGTGCTaGAGAGCGCGCCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWPRPRC*RARRIP
Trigger: AGGAATGCGGCGCGCTCTTCAGCACCTTGGACGGGG...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGCGACATGTCCTCGATaGTCCAGAAGCGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQATCPR*SRSAFW
Trigger: CCAAAAAGCGCTTCTGGATCATCGAGGACATGTCGC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGGGGCTGCGATGGGCTaGCCTCCGTGTGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTGAAMG*PPCGSR
Trigger: CCGGCTCCCACACGGAGGGCAGCCCATCGCAGCCCC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCATCATAGCCAAACATaGCGAGGAACTCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: GLLAPLLAPTPETRGERGHHSQT*RGTRSW
Trigger: CCATGACCGAGTTCCTCGGCATGTTTGGCTATGATG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGTGCCCACCACCTCCTTaGCCACCCGCTCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWCPPPP*PPAPRS
Trigger: AGACCGAGGAGCGGGTGGGCAAGGAGGTGGTGGGCA...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGCGGGCTACCAGGTTCTaGATCTGGACACTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQRATRF*IWTLLC
Trigger: GCACAGCAGTGTCCAGATGCAGAACCTGGTAGCCCG...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGGCCACAGTGCTGGCTaGCCGAGAACCTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQGHSAG*PRTWQY
Trigger: ATATTGCCAGGTTCTCGGGCAGCCAGCACTGTGGCC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACCGCATGAAGCCGTGCTaGAGGGAGTTGTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDRMKPC*RELSRF
Trigger: GAAGCGCGACAACTCCCTGCAGCACGGCTTCATGCG...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGGCCTGGGGCGCCGGTaGTCTCACCGGGTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSGLGRR*SHRVPA
Trigger: AGCCGGAACCCGGTGAGAGCACCGGCGCCCCAGGCC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGGGCCCAGGCGGGTCTaGACTCTCACCACGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGGPRRV*TLTTPA
Trigger: AGCAGGCGTGGTGAGAGTGCAGACCCGCCTGGGCCC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCGCAGCTCCCATCAGTaGTATTGTGAAGACAGACAG +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDRSSHQ*YCEDRQ
Trigger: CTGTCTGTCTTCACAATAGCACTGATGGGAGCTGCG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAAAAATGTGTGTGTGTTTaGGATGGAGCGCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: EQGLLAPLLAPTPETRGEKCVCV*DGAPRA
Trigger: CGCCCGCGGCGCTCCATCCCAAACACACACACATTT...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACACTTGGGGCGGCTTTaGGTGACTTTCCAAGTCCGG +
Preference number: 4 (lower is better)
Translates to: EQGLLAPLLAPTPETRGEHLGRL*VTFQVR
Trigger: CCGGACTTGGAAAGTCACCCAAAGCCGCCCCAAGTG...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAGGGCTGCCCTCCGTGTaGGAGCCGGCGTCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPGLPSV*EPASAR
Trigger: GCGAGCTGACGCCGGCTCCCACACGGAGGGCAGCCC...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGGGCTGCCCTCCGTGTaGGAGCCGGCGTCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTGLPSV*EPASAR
Trigger: GCGAGCTGACGCCGGCTCCCACACGGAGGGCAGCCC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGAAGCCTGCCTGGTGCTaGGGCCGCTGTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWKPAWC*GRCPPW
Trigger: CCAAGGAGGACAGCGGCCCCAGCACCAGGCAGGCTT...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCCGCTCCTCGGTCTTaGTGCTGGGGGCCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPPAPRS*CWGPAR
Trigger: CCTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGACCAGGTTCTGCATCTaGACACTGCTGTGCGACGGC +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQTRFCI*TLLCDG
Trigger: GCCGTCGCACAGCAGTGTCCAGATGCAGAACCTGGT...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGACCAGGTTCTGCATCTaGACACTGCTGTGCGACGGC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQTRFCI*TLLCDG
Trigger: GCCGTCGCACAGCAGTGTCCAGATGCAGAACCTGGT...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGAACCTTGGCGGGGCCTaGCTTCTGGATGCCCCGGAC +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWNLGGA*LLDAPD
Trigger: GTCCGGGGCATCCAGAAGCCAGGCCCCGCCAAGGTT...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAAGTGGCTCGGAAGCGCTaGAAGCCGTCGTTAATGAGC +
Preference number: 4 (lower is better)
Translates to: EQGLLAPLLAPTPETRGEVARKR*KPSLMS
Trigger: GCTCATTAACGACGGCTTCCAGCGCTTCCGAGCCAC...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATGGGCAGGCCCGAGTTaGAGAGGGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPWAGPS*RGPGPG
Trigger: CCCTGGCCCTGGCCCTCTCCAACTCGGGCCTGCCCA...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGGCTTCGTGGGGGCCTaGGGCGCCGGTGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSGFVGA*GAGALT
Trigger: GGTGAGAGCACCGGCGCCCCAGGCCCCCACGAAGCC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTTTGCCGGGACTGCGTaGCCATTTGATTCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQFAGTA*PFDSLL
Trigger: CAGCAACGAATCAAATGGCCACGCAGTCCCGGCAAA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAATGGAAGTGGGCCTTGTaGAGGAAGTCACACTGGCCG +
Preference number: 4 (lower is better)
Translates to: EQGLLAPLLAPTPETRGEWKWAL*RKSHWP
Trigger: CGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCA...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGAGGCATCTGGGGTATaGTGGAAGCCAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQEASGV*WKPAAS
Trigger: GGAAGCAGCTGGCTTCCACCATACCCCAGATGCCTC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTCGTTCTCCTGGAACTaGAGGAATCCGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQSFSWN*RNPGLT
Trigger: GGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGCGTGGGAGGTCATCTaGTGCTTGAGGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQAWEVI*CLRRKE
Trigger: CTCCTTCCTCCTCAAGCACCAGATGACCTCCCACGC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGGCTACTCTGGGTTTTaGACGCAGCCTCGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQGYSGF*TQPRFP
Trigger: GGGAAACCGAGGCTGCGTCCAAAACCCAGAGTAGCC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCGACTGCGTGGCCATTTaGTTCGTTGCTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVDCVAI*FVAGLL
Trigger: AAGGAGCCCAGCAACGAATCAAATGGCCACGCAGTC...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGAGGTCATCTGGTGCTTaGGGAGGAAGGAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQRSSGA*GGRRTG
Trigger: GCCAGTTCTCCTTCCTCCTCAAGCACCAGATGACCT...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACGCCCGTCCCAGTCCTaGGCAATGGTCGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRRPSQS*AMVAGP
Trigger: CGGCCCCGCGACCATTGCTCAGGACTGGGACGGGCG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGTCAGCAAGGTCTGTTTaGCTGCACTTGGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQSARSV*LHLGRL
Trigger: AAGCCGCCCCAAGTGCAGGCAAACAGACCTTGCTGA...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGTCCATTCCAACACGTaGTGCTGGGGAGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQVHSNT*CWGVAG
Trigger: TCCTGCAACTCCCCAGCAGCACGTGTTGGAATGGAC...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCATCATAGCCAAACATaGCGAGGAACTCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQHHSQT*RGTRSW
Trigger: CCATGACCGAGTTCCTCGGCATGTTTGGCTATGATG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGCCGGCCAGGAGAGCTaGTCGCCAGCCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGAGQES*SPALSL
Trigger: CAAGCTCAAGGCTGGCGAGCAGCTCTCCTGGCCGGC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGACCGGGTTTGAAGAGGTaGAGGTACTTGACATTCTCC +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGPGLKR*RYLTFS
Trigger: GGAGAATGTCAAGTACCTGCACCTCTTCAAACCCGG...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGTGGCGGATCACGTCCTaGTTACTCGTGAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQWRITS*LLVNLW
Trigger: CCAGAGGTTCACGAGTAAGCAGGACGTGATCCGCCA...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCCGGCGCTCATGCTTaGGCTTGTGAGAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDAGAHA*ACERSS
Trigger: AGATGACCTCTCACAAGCGCAAGCATGAGCGCCGGC...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTGATGAGGCCCTTGCTTaGAGAGATCCTCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPDEALA*RDPLHD
Trigger: ATCATGGAGAGGATCTCTGCAAGCAAGGGCCTCATC...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCTGGCTGGGGTGACCTaGTGCCCGCTTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGLAGVT*CPLPGS
Trigger: TGACCCAGGAAGCGGGCAGCAGGTCACCCCAGCCAG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGAAGTGGAAGTTTGCGTaGTTGATGGCCCCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWKWKFA*LMAPSK
Trigger: CTTGGACGGGGCCATCAAGCACGCAAACTTCCACTT...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGACTTGTTGGCGTACTTaGAGTCCGTGGCGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQTCWRT*SPWRGK
Trigger: CTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGT...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACAGCCAGTGTAGTCCATaGACTCATCTGTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDSQCSP*THLSQH
Trigger: ATGCTGAGACAGATGAGTGCATGGACTACACTGGCT...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGCTTGTACATGTGCGTaGGCCCGCAGAACTTGTAGC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQACTCA*ARRTCS
Trigger: GCTACAAGTTCTGCGGGCGCACGCACATGTACAAGC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCCTTGGTGCTGTCGGTaGAGCGGAAGCGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGPWCCR*SGSGSA
Trigger: TGCGCTGCCGCTTCCGCTGCACCGACAGCACCAAGG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGTCACCCGTGCTGACTaGCTTCTGCCCGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGVTRAD*LLPVSP
Trigger: GGGGGAGACGGGCAGAAGGCAGTCAGCACGGGTGAC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGGAGGGCAGGTGGGATaGAGGAGTCTTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDGGQVG*RSLCLQ
Trigger: CTGAAGGCAAAGACTCCTCCATCCCACCTGCCCTCC...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCTCCTGAAGCCTGCCTaGTGCTGGGGCCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGLLKPA*CWGRCP
Trigger: AGGACAGCGGCCCCAGCACCAGGCAGGCTTCAGGAG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTCTCCAGGTCGTACTTaGATGGCTTCTTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPSPGRT*MASCRC
Trigger: GCACCTACAAGAAGCCATCCAAGTACGACCTGGAGA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCCCGGACGTCGTACTTaGAAGGGCGCCCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVPGRRT*KGAPPC
Trigger: GCAAGGTGGGGCGCCCTTCCAAGTACGACGTCCGGG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGGGCACTGGGCACGCTaGCGAGGGGTGCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRGHWAR*RGVREP
Trigger: TGGCTCCCGCACCCCTCGCCAGCGTGCCCAGTGCCC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTTGTGGAAGTTCTCGTaGGTCATCACGTCAGACGTG +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPLWKFS*VITSDV
Trigger: CACGTCTGACGTGATGACCCACGAGAACTTCCACAA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAGAGCCAGGCAGGCCCTaGGGCAGCAGCCCCGAGATC +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPEPGRP*GSSPEI
Trigger: GATCTCGGGGCTGCTGCCCCAGGGCCTGCCTGGCTC...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGATGGAGGAAGTCACACTaGCCGTCACAGAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGWRKSH*PSQKSF
Trigger: AAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCA...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGGGCCATGGGAGGTTTaGTCTCGGCGGCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSGPWEV*SRRPRP
Trigger: CGGCCTCGGCCGCCGAGACCAAACCTCCCATGGCCC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGGGACGAGGGGGCCATaGGAGGTTTGGTCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARGTRGP*EVWSRR
Trigger: CCGCCGAGACCAAACCTCCCATGGCCCCCTCGTCCC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCACGGCCTGGAGGGGCCTaGCCCCTACCCGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPRPGGA*PLPVTS
Trigger: TGAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCG...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGATGCCCACCACCGTGTaGCGGCAGCCCGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARMPTTV*RQPGKV
Trigger: CACCTTCCCGGGCTGCCGCCACACGGTGGTGGGCAT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCTTTGCACCACCAGGGTaGCCGAGACCCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTFAPPG*PRPRPG
Trigger: GCCGGGGCGGGGTCTCGGCCACCCTGGTGGTGCAAA...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGTGGCCCGGGCTTCGATaGCATCATCATCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQWPGLR*HHHLQE
Trigger: TTCCTGGAGATGATGATGCCATCGAAGCCCGGGCCA...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGAAGGTGGGCAGGTGTaGCCTCGGGCAGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSAREGGQV*PRAACP
Trigger: AGGGCAGGCTGCCCGAGGCCACACCTGCCCACCTTC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCACCGCGCCCGCTTGCTaGGGGTATCCTCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTTAPAC*GYPRRW
Trigger: CCACCTCCGAGGATACCCTCAGCAAGCGGGCGCGGT...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGAGAGGTGCAGGTACTTaGCATTCTCCAGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: EEANTEARRETQPSLSGWRGAGT*HSPGRT
Trigger: AGTACGACCTGGAGAATGTCAAGTACCTGCACCTCT...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTGTTTTGGAGAAGGTTaGCTTCAGGTACTCGGGAGT +
Preference number: 4 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPCFGEG*LQVLGS
Trigger: ACTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTGTTTTGGAGAAGGTTaGCTTCAGGTACTCGGGAGT +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQCFGEG*LQVLGS
Trigger: ACTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGGAACCTGGCTGGGGTaGCCTGCTGCCCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSGTWLG*PAARFL
Trigger: CAGGAAGCGGGCAGCAGGTCACCCCAGCCAGGTTCC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTCCCCGCCTCTGTCCTaGGACGGACTCGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFSPPLS*DGLGVR
Trigger: CCGGACCCCGAGTCCGTCTCAGGACAGAGGCGGGGA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGCTCCTCGGTCTTGGTaGTGGGGGCCGGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTAPRSW*WGPARR
Trigger: TCTCCTGGCCGGCCCCCAGCACCAAGACCGAGGAGC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTCTCCAGGTGGGCCGTaGTGCTGGGCAGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFSPGGP*CWAAAG
Trigger: GCCTGCGGCTGCCCAGCAGCACGGCCCACCTGGAGA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCCGCAGCCCTCGTACTTaGACTCCTCGTACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVRSPRT*TPRTCR
Trigger: TCTACAAGTACGAGGAGTGCAAGTACGAGGGCTGCG...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCCCCGAGGAGCGGATGTaGCGGCGCTCATGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSPEERM*RRSCLR
Trigger: GCGCAAGCATGAGCGCCGGCACATCCGCTCCTCGGG...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGTGGGAGGTCATCTGGTaGTTGAGGAGGAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQWEVIW*LRRKEN
Trigger: GTTCTCCTTCCTCCTCAAGCACCAGATGACCTCCCA...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGTCCTCCTCGTCCTCCTaGGAGGACTCCCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARSSSSS*EDSPAA
Trigger: CGCAGCTGGGGAGTCCTCGCAGGAGGACGAGGAGGA...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGATGGCCTCGGGCAGCCTaGCCTCGCAGGGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRWPRAA*PRRGLG
Trigger: ACCGAGTCCCCTGCGAGGGCAGGCTGCCCGAGGCCA...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCCTCGGTCTTGGTGCTaGGGGCCGGCCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTPRSWC*GPARRA
Trigger: AGCTCTCCTGGCCGGCCCCCAGCACCAAGACCGAGG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGCCTTGGTCTCCAGGTaGGCCGTGCTGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSALVSR*AVLLGS
Trigger: GCTGCCCAGCAGCACGGCCCACCTGGAGACCAAGGC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCAGGTCGTACTTGGATaGCTTCTTGTAGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQQVVLG*LLVGAP
Trigger: GGGAGCACCTACAAGAAGCCATCCAAGTACGACCTG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTGTGCGGGAGCCAGGCTaGGGGTGGGCGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFVREPG*GWAEPW
Trigger: CCAAGGTTCCGCCCACCCCCAGCCTGGCTCCCGCAC...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGTGCCACAGTCTTCGGTaGCTCGGAAGCGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWCHSLR*LGSAGS
Trigger: GCTTCCAGCGCTTCCGAGCCACCGAAGACTGTGGCA...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCCGGGGCGCCTGCAGTaGAAGTGCGTGGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVPGRLQ*KCVVFC
Trigger: ACAGAAGACCACGCACTTCCACTGCAGGCGCCCCGG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGCGGATGCAGTGGAAGTaGTTGGTAGCCTTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQRMQWK*LVALLY
Trigger: GTACAGCAAGGCTACCAACCACTTCCACTGCATCCG...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCGTGCTCCGTGTCCTTaGCGCCCAGCAGCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFRAPCP*RPAARA
Trigger: CGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGATGTTTACATCTTCAGTaGCGGCTGGTTTATCTGTGG +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGCLHLQ*RLVYLW
Trigger: CCACAGATAAACCAGCCGTCACTGAAGATGTAAACA...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTGTTTACATCTTCAGTaGCGGCTGGTTTATCTGTGG +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQCLHLQ*RLVYLW
Trigger: CCACAGATAAACCAGCCGTCACTGAAGATGTAAACA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGGGTGCTCTTCCCATTaGGGTGGCAGCCGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGGCSSH*GGSRGS
Trigger: ACTACCACGGCTGCCACCTCAATGGGAAGAGCACCC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAGGGCAGGTGAGGCACTaGCGCTGGGATCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPGQVRH*RWDLRH
Trigger: ATGCCTCAGATCCCAGCGTCAGTGCCTCACCTGCCC...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCTCTGGGACAGGCAGTaGGGTAGGAGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVLWDRQ*GRSSSI
Trigger: GATGCTGCTGCTCCTACCTCACTGCCTGTCCCAGAG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCTGGCCCCTACCCGTaGCTTCACGTGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPPGPYP*LHVPCR
Trigger: TCTGCAGGGCACGTGAAGTCACGGGTAGGGGCCAGG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAGTCGGCGCTGGAGCTaGACTGGCAGAAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRSRRWS*TGRSPR
Trigger: CCGCGGGCTTCTGCCAGTTCAGCTCCAGCGCCGACT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGAGGAGGCTTCTGGATaGCAGCCTCCCCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTEEASG*QPPRQP
Trigger: AGGCTGGCGGGGAGGCTGTCATCCAGAAGCCTCCTC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACCCACTTCTCGATCACTaGCCGTCTCTTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDPLLDH*PSLVFL
Trigger: GAGGAAGACAAGAGACGGGCAGTGATCGAGAAGTGG...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCTGAAGCCTGCCTGGTaGTGGGGCCGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTLKPAW*WGRCPP
Trigger: AGGAGGACAGCGGCCCCAGCACCAGGCAGGCTTCAG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGCCGGCCAGGAGAGCTaGTCGCCAGCCTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSAGQES*SPALSL
Trigger: CAAGCTCAAGGCTGGCGAGCAGCTCTCCTGGCCGGC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTCTGCATCTGGACACTaGTGTGCGACGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGSASGH*CATAGA
Trigger: TGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCAGGGACGCAGAGGACTaGTGGCTGGTAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTRDAED*WLVGEA
Trigger: CGCCTCCCCTACCAGCCAGCAGTCCTCTGCGTCCCT...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACTGGCTGGGGTGACCTaGTGCCCGCTTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPLAGVT*CPLPGS
Trigger: TGACCCAGGAAGCGGGCAGCAGGTCACCCCAGCCAG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGAGTCACCGTTCTCCCTaGAAGGAGCCACCACCATCC +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWSHRSP*KEPPPS
Trigger: GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACT...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTCCTGTTTGCCGTGGTaGTTGCGATGCGCCGTGACC +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGSCLPW*LRCAVT
Trigger: GGTCACGGCGCATCGCAAGCACCACGGCAAACAGGA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGGCAGCCCGGGAAGGTaGAGTGGAAGTGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARGSPGR*SGSAST
Trigger: AGTGCTCGCACTTCCACTGCACCTTCCCGGGCTGCC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGTGCTGACTGCCTTCTaGCCGTCTCCCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTVLTAF*PSPPGQ
Trigger: CTGCCCAGGGGGAGACGGGCAGAAGGCAGTCAGCAC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACTTCTTAATAACCAGGTaGCGAGGAGACCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDFLITR*RGDQIQ
Trigger: TTGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAA...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCTCCAACACGTGCTGCTaGGGAGTTGCAGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVSNTCC*GVAGAP
Trigger: AGGGGCTCCTGCAACTCCCCAGCAGCACGTGTTGGA...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAGGAACTCGGTCATGGTaGAGGCCGCGTAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPGTRSW*RPRSPA
Trigger: TGCGGGACTACGCGGCCTCCACCATGACCGAGTTCC...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGCAGCATGGAGGAGGTaGCTGCCTCCGGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRAAWRR*LPPGWS
Trigger: GCTCCACCCCGGAGGCAGCCACCTCCTCCATGCTGC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCCCGGACGTCGTACTTaGAAGGGCGCCCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTPGRRT*KGAPPC
Trigger: GCAAGGTGGGGCGCCCTTCCAAGTACGACGTCCGGG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTGGGTGGGCGGAACCTTaGCGGGGCCTGGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFGWAEP*RGLASG
Trigger: TCCAGAAGCCAGGCCCCGCCAAGGTTCCGCCCACCC...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGATGGGTATTCTTCTTGTaGAAGTTCTCGTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: STYSRDARGTRDSRLIEGWVFFL*KFSWVI
Trigger: GATGACCCACGAGAACTTCCACAAGAAGAATACCCA...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTGGGTATTCTTCTTGTaGAAGTTCTCGTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQWVFFL*KFSWVI
Trigger: GATGACCCACGAGAACTTCCACAAGAAGAATACCCA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCCGGGGCGCCTGCAGTaGAAGTGCGTGGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARPGRLQ*KCVVFC
Trigger: ACAGAAGACCACGCACTTCCACTGCAGGCGCCCCGG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAGACGCAGAGGACTGCTaGCTGGTAGGGGAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPDAEDC*LVGEAL
Trigger: GAGCGCCTCCCCTACCAGCCAGCAGTCCTCTGCGTC...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAAGTAGGGCGTGGGGGTaGGCAGGCCCGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPSRAWG*AGPSWR
Trigger: TCTCCAACTCGGGCCTGCCCACCCCCACGCCCTACT...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCAGTAGGGCGTGGGGGTaGGCAGGCCCGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTSRAWG*AGPSWR
Trigger: TCTCCAACTCGGGCCTGCCCACCCCCACGCCCTACT...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACCGAGGCGACCAGCGTaGGTGTGTCAGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRPRRPA*VCQGWL
Trigger: CAGCCACCCCTGACACACCCACGCTGGTCGCCTCGG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGGAGGCATCTGGGGTATaGTGGAAGCCAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWEASGV*WKPAAS
Trigger: GGAAGCAGCTGGCTTCCACCATACCCCAGATGCCTC...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGAAGGACATCACCCGATaGCCATGCCCCAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWKDITR*PCPREA
Trigger: AGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTT...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCCCAGTCCACCCCACCTaGCCCTGGCAGGATCACCAC +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSPVHPT*PWQDHH
Trigger: GTGGTGATCCTGCCAGGGCCAGGTGGGGTGGACTGG...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAGGAGGAAGGAGAACTaGCAGCCCTCCCGGATGCAG +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGRRKEN*QPSRMQ
Trigger: CTGCATCCGGGAGGGCTGCCAGTTCTCCTTCCTCCT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCCCGGGAAGGTGCAGTaGAAGTGCGAGCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGPGKVQ*KCEHLS
Trigger: GCTCAAGTGCTCGCACTTCCACTGCACCTTCCCGGG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACAGAGATCCTCTCCATaGTGGAGGCGGGTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPQRSSP*WRRVVP
Trigger: CGGCACCACCCGCCTCCATCATGGAGAGGATCTCTG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGACTGACGCTGGGATCTaGGGCATCTGGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGTDAGI*GIWGMV
Trigger: CACCATACCCCAGATGCCTCAGATCCCAGCGTCAGT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAAAGGAAGCCGCACACATaGCAATACAAAGTCACCGTT +
Preference number: 4 (lower is better)
Translates to: EQGLLAPLLAPTPETRGERKPHT*QYKVTV
Trigger: AACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCT...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGCTTGCGATGCGCCGTaGCCTTGGTGCTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRACDAP*PWCCRC
Trigger: GCACCGACAGCACCAAGGTCACGGCGCATCGCAAGC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGATGGCTTCTTGTAGGTaGTCCCGTTCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGMASCR*SRSGAA
Trigger: TGCGGCCCCAGAACGGGAGCACCTACAAGAAGCCAT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGTCATCACGTCAGACGTaGTCGTGTACACCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQSSRQT*SCTPCY
Trigger: GTAACAAGGTGTACACGAGCACGTCTGACGTGATGA...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAGGCAGGATCACCACATaGCCTGCAGGAGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPGRITT*PAGAVA
Trigger: GGCTACTGCTCCTGCAGGGCATGTGGTGATCCTGCC...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGATGTTCCCTGCCGCGGTaGTCTCGTTACCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRCSLPR*SRYPRG
Trigger: CCCCCGTGGGTAACGAGAGCACCGCGGCAGGGAACA...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCGCATCCTTCCTGTTTaGACCACCAGGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARRILPV*TTRVAE
Trigger: CTCGGCCACCCTGGTGGTGCAAACAGGAAGGATGCG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACACTGGCCAGGTGTGTaGCTGCCAGGTCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRHWPGV*LPGQAL
Trigger: CAGGGCCTGACCTGGCAGGCACACACCTGGCCAGTG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTAAGCCTGCCTGGTGCTaGGGCCGCTGTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFKPAWC*GRCPPW
Trigger: CCAAGGAGGACAGCGGCCCCAGCACCAGGCAGGCTT...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTGCAGGGGCAGGATGGTaGCCTTGGTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFAGAGW*PWSPGG
Trigger: CCCACCTGGAGACCAAGGCCACCATCCTGCCCCTGC...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACTGCAGTGGAAGTGCGTaGTCTTCTGTCCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDCSGSA*SSVRRT
Trigger: AGTTCTACGGACAGAAGACCACGCACTTCCACTGCA...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCATCTAGACTGCGGTCCTaGGAGGCTTCGTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPSRLRS*EASWGP
Trigger: AGGCCCCCACGAAGCCTCCCAGGACCGCAGTCTAGA...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGCATTTGATTCGTTGCTaGGCTCCTTCACAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQHLIRC*APSQSG
Trigger: ACCTGACTGTGAAGGAGCCCAGCAACGAATCAAATG...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCCCAGTCCTGAGCAATaGTCGCGGGGCCGAATCGGC +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFPSPEQ*SRGRIG
Trigger: GCCGATTCGGCCCCGCGACCATTGCTCAGGACTGGG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCCTGTTCTCTCCCGGTaGCCCAATCTGACACCAGCT +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGPVLSR*PNLTPA
Trigger: AGCTGGTGTCAGATTGGGCCACCGGGAGAGAACAGG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGAGCCAGGTTCCTCCTaGAGACCTCTGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTEPGSS*RPLGRR
Trigger: CCTCCTCCCCAGAGGTCTCCAGGAGGAACCTGGCTC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGCTGCTCGCCAGCCTTaGGCTTGCGGATGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSAARQP*ACGCTP
Trigger: AGGAGTACATCCGCAAGCTCAAGGCTGGCGAGCAGC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGCGTAGGCATCGTCCTTaGTGTGGTAGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWRRHRP*CGSSCA
Trigger: AGCACAAGAGCTACCACATCAAGGACGATGCCTACG...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCTCTGCCAACTTCTCCTaGACCAGCGCCTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTSANFS*TSAFTA
Trigger: GGCCGTGAAGGCGCTGGTTCAGGAGAAGTTGGCAGA...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGGGGTGGAGCCCGCGTaGAGCTTCTCAAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSGVEPA*SFSKLI
Trigger: GATCAGCTTTGAGAAGCTGCACGCGGGCTCCACCCC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCATCTGGACACTGCTGTaGGACGGCAGGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTIWTLL*DGRGRM
Trigger: CATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGAT...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCTCTGCATCTGGACACTaGTGTGCGACGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSSASGH*CATAGA
Trigger: TGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGA...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAATGGCTTCTTGTAGGTaGTCCCGTTCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPMASCR*SRSGAA
Trigger: TGCGGCCCCAGAACGGGAGCACCTACAAGAAGCCAT...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAAACGCATGAAGCCGTaGTGCAGGGAGTTGTCGCGC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARKRMKP*CRELSR
Trigger: GCGCGACAACTCCCTGCAGCACGGCTTCATGCGTTT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAACTGGCAGTCGGCTGTaGCACAGTCTTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPTGSRL*HSLRWL
Trigger: GAGCCACCGAAGACTGTGGCACAGCCGACTGCCAGT...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTTGCTGGACTCCTCGTaGTCCGTGTCCTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFLLDSS*SVSLAP
Trigger: GGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGTGCCCAGGCCAGGGTTaGCCTGAGACATCTTATTCA +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWCPGQG*PETSYS
Trigger: TGAATAAGATGTCTCAGGGCAACCCTGGCCTGGGCA...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCACCTTCCAGGGCTCTaGCAACTTCTCCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGHLPGL*QLLLNQ
Trigger: CTGGTTCAGGAGAAGTTGGCAGAGCCCTGGAAGGTG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACCGTCTTCCGCCGCTTaGCGAAGGGCGACATGTCCT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRPSSAA*RRATCP
Trigger: AGGACATGTCGCCCTTCGGCAAGCGGCGGAAGACGG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAGTCCATCTGCGACATaGCCACCACCGTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRSPSAT*PPPCGG
Trigger: GCCGCCACACGGTGGTGGGCATGTCGCAGATGGACT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAACTCCTCCGAGTCGGTaGGCAGGTCCTCGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRTPPSR*AGPRRR
Trigger: ACGACGACGAGGACCTGCGCACCGACTCGGAGGAGT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAAATGTGTGTGTGTTTaGGATGGAGCGCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARKCVCV*DGAPRA
Trigger: CGCCCGCGGCGCTCCATCCCAAACACACACACATTT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTGGAACTCGGTCATGGTaGAGGCCGCGTAGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFGTRSW*RPRSPA
Trigger: TGCGGGACTACGCGGCCTCCACCATGACCGAGTTCC...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCGAGGAACTCGGTCATaGTGGAGGCCGCGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFRGTRS*WRPRSP
Trigger: GGGACTACGCGGCCTCCACCATGACCGAGTTCCTCG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAACGGCAGGGGCAGGATaGTGGCCTTGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRTAGAG*WPWSPG
Trigger: ACCTGGAGACCAAGGCCACCATCCTGCCCCTGCCGT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGGCTGCCCGAGAACCTaGCAATATATTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: PQRRPIRRLGGRRSPPCQGCPRT*QYISGK
Trigger: TTTACCAGAAATATATTGCCAGGTTCTCGGGCAGCC...CTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCCGGCGCGGATGCAGTaGAAGTGGTTGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTPARMQ*KWLVAL
Trigger: CAAGGCTACCAACCACTTCCACTGCATCCGCGCCGG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCTGCTGCCCGCTTCCTaGGTCAAAGGTGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFLLPAS*VKGGRG
Trigger: CCCTCTGCCACCTTTGACCCAGGAAGCGGGCAGCAG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGACCACGCAGTGGAAGTaGGCCTTGTGGAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGTTQWK*ALWRKS
Trigger: TGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCATCCTCCACCACGCAGTaGAAGTGGGCCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPSSTTQ*KWALWR
Trigger: CCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGA...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGGAGCAGCAGCATCTTTaGCTAGAAGGACATCACCCG +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWEQQHL*LEGHHP
Trigger: CGGGTGATGTCCTTCTAGCCAAAGATGCTGCTGCTC...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGATGTGGTCCAGGCAGTaGGATTCGGCCTTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARMWSRQ*DSALPD
Trigger: GTCTGGCAAGGCCGAATCCCACTGCCTGGACCACAT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCCCTCCCGGATGCAGTaGAAGTGGCTGTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTPSRMQ*KWLFTW
Trigger: CCAGGTGAACAGCCACTTCCACTGCATCCGGGAGGG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGATGTGCTTCCGCGCGTaGGAGGTCATCTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARMCFRA*EVIWCL
Trigger: CAAGCACCAGATGACCTCCCACGCGCGGAAGCACAT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCACCAGCTGGTGGCCTaGAGTAGGGAAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFHQLVA*SREGGQ
Trigger: CTGCCCACCTTCCCTACTCCAGGCCACCAGCTGGTG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCGTAGGCATCGTCCTTaGTGTGGTAGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGRRHRP*CGSSCA
Trigger: AGCACAAGAGCTACCACATCAAGGACGATGCCTACG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTGGAGGAATCCGGGTTTaGCCTGGGGCTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFGGIRV*PGAWRS
Trigger: AGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCC...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAATTCAGCCATGGGTGTaGGCCACAGAGGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPIQPWV*ATEEAN
Trigger: ATTGGCCTCCTCTGTGGCTCACACCCATGGCTGAAT...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGAAGTGGCAGCTGAGTaGGGCCTTGAAGCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSAREVAAE*GLEALE
Trigger: TTCAAGCGCTTCAAGGCCTCACTCAGCTGCCACTTC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGTCAGCAAGGTCTGTTTaGCTGCACTTGGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARSARSV*LHLGRL
Trigger: AAGCCGCCCCAAGTGCAGGCAAACAGACCTTGCTGA...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGGGATGGAGGAGTCTTTaGCTTCAGTCAGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWGWRSL*LQSARS
Trigger: AGACCTTGCTGACTGAAGGCAAAGACTCCTCCATCC...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGTGTCACTTCATCCTTTaGATCCCAAGAGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWCHFIL*IPRGQG
Trigger: ACCCTGGCCTCTTGGGATGCAAAGGATGAAGTGACA...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGATGGATGTGGCCACAGTaGTGGCTGCCCGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRWMWPQ*WLPENL
Trigger: CAGGTTCTCGGGCAGCCAGCACTGTGGCCACATCCA...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAGGCTGGAGTTCTTGCTaGTCAGGGCGGAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPGWSSC*SGRRSQ
Trigger: TTGACTTCTCCGCCCTGAGCAGCAAGAACTCCAGCC...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGGCTGGAGTTCTTGCTaGTCAGGGCGGAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARGWSSC*SGRRSQ
Trigger: TTGACTTCTCCGCCCTGAGCAGCAAGAACTCCAGCC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCAGGCTGGAGTTCTTaGTGCTCAGGGCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPSGWSS*CSGRRS
Trigger: ACTTCTCCGCCCTGAGCAGCAAGAACTCCAGCCTGA...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACAGTCAGGTCTAGACTaGGGTCCTGGGAGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPQSGLD*GPGRLR
Trigger: ACGAAGCCTCCCAGGACCGCAGTCTAGACCTGACTG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTCATGCTTCTTGATGTaGCAGGGGAGCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGSCFLM*QGSLVV
Trigger: CACCACCAAGCTCCCCTGGCACATCAAGAAGCATGA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGCGTGCTTGTACATGTaGGTGCGCCCGCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTACLYM*VRPQNL
Trigger: CAAGTTCTGCGGGCGCACGCACATGTACAAGCACGC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCTTGTGCGAGTCCATCTaGGACATGCCCACCACCGTG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTLCESI*DMPTTV
Trigger: CACGGTGGTGGGCATGTCGCAGATGGACTCGCACAA...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGGAGGGCAGGTGGGATaGAGGAGTCTTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTGGQVG*RSLCLQ
Trigger: CTGAAGGCAAAGACTCCTCCATCCCACCTGCCCTCC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGGCAGCATGGAGGAGGTaGCTGCCTCCGGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLAAWRR*LPPGWS
Trigger: GCTCCACCCCGGAGGCAGCCACCTCCTCCATGCTGC...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCCGGTCTTCAGTTTTTaGATGAAGAAGTCGTACTTG +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQPVFSF*MKKSYL
Trigger: CAAGTACGACTTCTTCATCCAAAAACTGAAGACCGG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCAGGTCGTACTTGGATaGCTTCTTGTAGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVQVVLG*LLVGAP
Trigger: GGGAGCACCTACAAGAAGCCATCCAAGTACGACCTG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGATGCCACAGTCTTCGGTaGCTCGGAAGCGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRCHSLR*LGSAGS
Trigger: GCTTCCAGCGCTTCCGAGCCACCGAAGACTGTGGCA...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACAAGGTCGTCGTTGCTaGACTCCTCGTGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPQGRRC*TPRAPC
Trigger: ACACGGAGCACGAGGAGTCCAGCAACGACGACCTTG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGGAGGTTTGGTGGCACTaGGCCCAGCCTCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLEVWWH*AQPRWR
Trigger: CCGCCACCGAGGCTGGGCCCAGTGCCACCAAACCTC...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTCCTCCACCACGCAGTaGAAGTGGGCCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFSSTTQ*KWALWR
Trigger: CCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCCTCCTTGTCAGGCTaGGAGTTGTCCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPPSLSG*ELSSED
Trigger: GTCCTCAGAGGACAACTCCCAGCCTGACAAGGAGGG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATTCAAGTTAAGAGTTaGAATCACGCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQIQVKS*NHAAPI
Trigger: GATGGGAGCTGCGTGATTCCAACTCTTAACTTGAAT...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGATGGCGGGTCACTGTCTaGGCAGATGCTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRWRVTV*ADAHSS
Trigger: GCTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCA...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAGAGGTGCAGGTACTTaGCATTCTCCAGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGRGAGT*HSPGRT
Trigger: AGTACGACCTGGAGAATGTCAAGTACCTGCACCTCT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACACCTTCTGTTTCCCTaGAGAGACCCGGCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRHLLFP*RDPASL
Trigger: TAGGGAGGCCGGGTCTCTTCAGGGAAACAGAAGGTG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCGCAGCCCTCGTACTTaGACTCCTCGTACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARRSPRT*TPRTCR
Trigger: TCTACAAGTACGAGGAGTGCAAGTACGAGGGCTGCG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGCCGGCGCTCATGCTTaGGCTTGTGAGAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRAGAHA*ACERSS
Trigger: AGATGACCTCTCACAAGCGCAAGCATGAGCGCCGGC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCACCTTTGTACCAAACCTaGGCAGGTACACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPPLYQT*AGTPSR
Trigger: CCTGGAAGGTGTACCTGCGCAGGTTTGGTACAAAGG...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCCTTGCCAGACGTTTTaGAGACGTACTTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGPCQTF*RRTCSS
Trigger: GGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAGTGGGATTCGGCCTTaGCAGACGTTTTGCAGACGT +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARSGIRP*QTFCRR
Trigger: ACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGACAAGCTGCGTCCTTaGAGTCCTCGTAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARDKLRP*SPRKGR
Trigger: TCGACCTTTACGAGGACTGCAAGGACGCAGCTTGTC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCCAATCTGGGTAGACTaGACCAGCGAAGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARPIWVD*TSEEAS
Trigger: GGATGCTTCTTCGCTGGTGCAGTCTACCCAGATTGG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCTCCTCGGATGTAGCTaGGGGTGTCACTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARLLGCS*GCHFIL
Trigger: AAGGATGAAGTGACACCCCCAGCTACATCCGAGGAG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGGCAGGGGCAGGATGGTaGCCTTGGTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLAGAGW*PWSPGG
Trigger: CCCACCTGGAGACCAAGGCCACCATCCTGCCCCTGC...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCGGATGCAGTGGAAGTaGTTGGTAGCCTTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARRMQWK*LVALLY
Trigger: GTACAGCAAGGCTACCAACCACTTCCACTGCATCCG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCACGGCCAGCCAGTATaGGGAAGTAGGGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLHGQPV*GSRAWG
Trigger: CCCCCACGCCCTACTTCCCCATACTGGCTGGCCGTG...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTGGAAGTGGGCCTTGTaGAGGAAGTCACACTGGCCG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFWKWAL*RKSHWP
Trigger: CGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCACACTTCTCCTGGAACTaGAGGAATCCGGGTTTGACC +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPHFSWN*RNPGLT
Trigger: GGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTG...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCGGGACTCACTTCTCCTaGAACTGGAGGAATCCGGGT +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSGTHFS*NWRNPG
Trigger: ACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCC...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAAAGGGAACCCAATCTaGGTAGACTGCACCAGCGAA +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGKGNPI*VDCTSE
Trigger: TTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAGACGGTCCCCGTGGTaGTGGAGTCTGTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRRRSPW*WSLFWR
Trigger: TCTCCAAAACAGACTCCATCACCACGGGGACCGTCT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAACTTGTAGAACTTCTTaGAGCCGTCCTTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPTCRTS*SRPWRR
Trigger: CCTACGCCAAGGACGGCTTCAAGAAGTTCTACAAGT...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAGGCCAGGGTTGCCCTaGGACATCTTATTCATAAGC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARRPGLP*DILFIS
Trigger: GCTTATGAATAAGATGTCTCAGGGCAACCCTGGCCT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAGGGGAGCTTGGTGGTaGTGTTGGTCACAAAATAGC +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARRGAWW*CWSQNS
Trigger: GCTATTTTGTGACCAACATCACCACCAAGCTCCCCT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGGAAGTGCGAGCACTTaGGCTTGTACTTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRGSAST*ACTCSR
Trigger: CCGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGTGTCACTTCATCCTTTaGATCCCAAGAGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARCHFIL*IPRGQG
Trigger: ACCCTGGCCTCTTGGGATGCAAAGGATGAAGTGACA...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCTACAGCCCACCTGCATaGAGTGATAGTGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTYSPPA*SDSGCS
Trigger: AGAGCACCCACTATCACTGCATGCAGGTGGGCTGTA...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGATCACCCGATGGCCATaGCCCAGAGAGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLITRWP*PREAGD
Trigger: GTCCCCAGCCTCTCTGGGGCATGGCCATCGGGTGAT...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCTGCAGAGAGTAGTATaGAAACTGGTCTCGCACGTT +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGLQRVV*KLVSHV
Trigger: AACGTGCGAGACCAGTTTGCATACTACTCTCTGCAG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCATTCGGAACTCGCAGTaGTGGTTGGGACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTIRNSQ*WLGQRH
Trigger: GTGTCTCTGTCCCAACCAGCACTGCGAGTTCCGAAT...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCCTCCTCGGATGTAGCTaGGGGTGTCACTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSLLGCS*GCHFIL
Trigger: AAGGATGAAGTGACACCCCCAGCTACATCCGAGGAG...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGGAGGGCTCCTCCGCGTaGTCTTCCTCATCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLEGSSA*SSSSLH
Trigger: GTGCAGCGATGAGGAAGACCACGCGGAGGAGCCCTC...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGACGGCAGGGGCAGGATaGTGGCCTTGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLTAGAG*WPWSPG
Trigger: ACCTGGAGACCAAGGCCACCATCCTGCCCCTGCCGT...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAGAGCCAGGCAGGCCCTaGGGCAGCAGCCCCGAGATC +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSEPGRP*GSSPEI
Trigger: GATCTCGGGGCTGCTGCCCCAGGGCCTGCCTGGCTC...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAATCCGGGTTTGACCTaGGGCTTGGCGTTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSNPGLT*GLAFSR
Trigger: TCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATT...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGATGCCCCAGAGAGGCTaGGGACAGCAGCACCATCCG +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLMPQRG*GQQHHP
Trigger: CGGATGGTGCTGCTGTCCCCAGCCTCTCTGGGGCAT...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACGTACTTGCAGTCCGTaGCGAGGCAAGGATCGTTCT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRRTCSP*RGKDRS
Trigger: AGAACGATCCTTGCCTCGCCACGGACTGCAAGTACG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAAGTGGCTGTTCACCTaGTTGTACTTGCAACCTAGC +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGKWLFT*LYLQPS
Trigger: GCTAGGTTGCAAGTACAACCAGGTGAACAGCCACTT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCCTGGGGCGGAGGCTaGGGCCAGGGAGTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPWGGG*GQGVAK
Trigger: TTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCGTCCTGCTTACTCGTaGACCTCTGGTAGTTACACT +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTRPAYS*TSGSYT
Trigger: AGTGTAACTACCAGAGGTTCACGAGTAAGCAGGACG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGGATGGAGGAGTCTTTaGCTTCAGTCAGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTGWRSL*LQSARS
Trigger: AGACCTTGCTGACTGAAGGCAAAGACTCCTCCATCC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACCACTTCTCGATCACTaGCCGTCTCTTGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRPLLDH*PSLVFL
Trigger: GAGGAAGACAAGAGACGGGCAGTGATCGAGAAGTGG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAAGTGGAAGTTTGCGTaGTTGATGGCCCCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRKWKFA*LMAPSK
Trigger: CTTGGACGGGGCCATCAAGCACGCAAACTTCCACTT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGATGGTGGAAGCCAGCTaGTTCCAGGCGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLMVEAS*FQASRV
Trigger: CACCCTGCTCGCCTGGAAGCAGCTGGCTTCCACCAT...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGGAAGGGGGATGTTTTaGAAAGGGAACCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTGRGMF*KGNPIW
Trigger: CCAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGGAAAAGTAAACCACTaGCCCCCAGTTGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRGKVNH*PPVEPG
Trigger: ACCTGGCTCAACTGGGGGGCAGTGGTTTACTTTTCC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAATCTTCAGTGACGGCTaGTTTATCTGTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPIFSDG*FICGQS
Trigger: GGACTGCCCACAGATAAACCAGCCGTCACTGAAGAT...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGGCTGCCCGAGAACCTaGCAATATATTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGGCPRT*QYISGK
Trigger: TTTACCAGAAATATATTGCCAGGTTCTCGGGCAGCC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCTTGTGGAAGTTCTCGTaGGTCATCACGTCAGACGTG +
Preference number: 4 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTLWKFS*VITSDV
Trigger: CACGTCTGACGTGATGACCCACGAGAACTTCCACAA...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCCGTCGTTAATGAGCTaGGTATTCTTCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVPSLMS*VFFLWK
Trigger: CTTCCACAAGAAGAATACCCAGCTCATTAACGACGG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTTGTTGGGGTTGATGTaGTCCAGGCAGTGGGATTCG +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFLLGLM*SRQWDS
Trigger: CGAATCCCACTGCCTGGACCACATCAACCCCAACAA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTCTTCAGTTTTTGGATaGAGAAGTCGTACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ARASMASSSPGRGMFCKGSSVFG*RSRTWR
Trigger: CCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCACCTTGCCTGTCTTaGAGGCGATGGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPPCLS*RRWPRP
Trigger: TGGGCGGGGCCATCGCCTTCAAGACAGGCAAGGTGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACCGGGTTTGAAGAGGTaGAGGTACTTGACATTCTCC +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRPGLKR*RYLTFS
Trigger: GGAGAATGTCAAGTACCTGCACCTCTTCAAACCCGG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAGGCTCGCCGCGCTCCTaGTTCTCGTGCTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSGSPRS*FSCLRL
Trigger: CAAGCGCAAGCACGAGAAGCAGGAGCGCGGCGAGCC...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTCTCCAGGTCGTACTTaGATGGCTTCTTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFSPGRT*MASCRC
Trigger: GCACCTACAAGAAGCCATCCAAGTACGACCTGGAGA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTATCTTCAGTGACGGCTaGTTTATCTGTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFIFSDG*FICGQS
Trigger: GGACTGCCCACAGATAAACCAGCCGTCACTGAAGAT...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
3UTR CAA 72 bp TTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTaGCAAAGGGAACCCAATCTGGGTAGACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: FDGIIISRKGDV*QREPNLGRLHQ
Trigger: CTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATGGGGCGGCTTTGGGTaGCTTTCCAAGTCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSWGGFG*LSKSGG
Trigger: TCCCCCGGACTTGGAAAGTCACCCAAAGCCGCCCCA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGAGACGGTCCCCGTGGTaGTGGAGTCTGTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLRRSPW*WSLFWR
Trigger: TCTCCAAAACAGACTCCATCACCACGGGGACCGTCT...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR TCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAAGAAGCCCGCGGCGCTaGTCACGTCCTGTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSRSPRR*SRPVCR
Trigger: ACGGCAAACAGGACGTGATCAGCGCCGCGGGCTTCT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCACCTTCCAGGGCTCTaGCAACTTCTCCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLHLPGL*QLLLNQ
Trigger: CTGGTTCAGGAGAAGTTGGCAGAGCCCTGGAAGGTG...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCGTGGTGCTTGCGATaGGCCGTGACCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPWCLR*AVTLVL
Trigger: CAGCACCAAGGTCACGGCGCATCGCAAGCACCACGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATGTTGGGAGGTTTGGTaGCACTGGGCCCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSCWEVW*HWAQPR
Trigger: CCGAGGCTGGGCCCAGTGCCACCAAACCTCCCAACA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACATTTGATTCGTTGCTaGGCTCCTTCACAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRHLIRC*APSQSG
Trigger: ACCTGACTGTGAAGGAGCCCAGCAACGAATCAAATG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAGCTGCTCGCCAGCCTTaGGCTTGCGGATGTACTCCT +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSAARQP*ACGCTP
Trigger: AGGAGTACATCCGCAAGCTCAAGGCTGGCGAGCAGC...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCTCTTCAGTTTTTGGATaGAGAAGTCGTACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSSSVFG*RSRTWR
Trigger: CCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGA...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAGTCCTCCTTGGAGGCTaGCCCGTCCGAATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSVLLGG*PVRILL
Trigger: GAGAAGGATTCGGACGGGGCAGCCTCCAAGGAGGAC...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACGCTCCTGCTTCTCGTaGTTGCGCTTGTGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSRSCFS*LRLCES
Trigger: GGACTCGCACAAGCGCAAGCACGAGAAGCAGGAGCG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACACAGCAGCACGTGGTaGCCACAGAGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSHSSTW*PQSSGG
Trigger: GCCTCCTGAACTCTGTGGGCACCACGTGCTGCTGTG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATCCAACACGTGCTGCTaGGGAGTTGCAGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSSNTCC*GVAGAP
Trigger: AGGGGCTCCTGCAACTCCCCAGCAGCACGTGTTGGA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCGGTCTTCAGTTTTTaGATGAAGAAGTCGTACTTG +
Preference number: 4 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPPVFSF*MKKSYL
Trigger: CAAGTACGACTTCTTCATCCAAAAACTGAAGACCGG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAATGTGGCCACAGTGCTaGCTGCCCGAGAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSMWPQC*LPENLA
Trigger: TGCCAGGTTCTCGGGCAGCCAGCACTGTGGCCACAT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACCGTCGTTAATGAGCTaGGTATTCTTCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRPSLMS*VFFLWK
Trigger: CTTCCACAAGAAGAATACCCAGCTCATTAACGACGG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATCCAGAAGCGCTTTTTaGCCCCCGAGGCTGTCGGCA +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSSRSAF*PPRLSA
Trigger: TGCCGACAGCCTCGGGGGCCAAAAAGCGCTTCTGGA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCCTCTACAAAAACCCTaGACCAAATCCCACAGGATA +
Preference number: 4 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFPLQKP*TKSHRI
Trigger: TATCCTGTGGGATTTGGTCCAGGGTTTTTGTAGAGG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACAAAATAGCAGCCGGTaGGGAGGCAGTGGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSQNSSR*GGSGSA
Trigger: GGCACTACCACTGCCTCCGCACCGGCTGCTATTTTG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAACTTGCAACCTAGCCTaGCACACTCCTCGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSTCNLA*HTPRAW
Trigger: CCAAGCGCGAGGAGTGTGGCAGGCTAGGTTGCAAGT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCTGTCCAGTTCGGGTaGTCCTGGCTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPVQFG*SWLSGC
Trigger: ACAGCCAGAAAGCCAGGACCACCCGAACTGGACAGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR TCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAACCTTGAGCGAGAACTaGCAAGCTGCGTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSTLSEN*QAASLQ
Trigger: CTGCAAGGACGCAGCTTGTCAGTTCTCGCTCAAGGT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATCAGGCTGGAGTTCTTaGTGCTCAGGGCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSSGWSS*CSGRRS
Trigger: ACTTCTCCGCCCTGAGCAGCAAGAACTCCAGCCTGA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACAATCTGACACCAGCTaGTGGCCTGGAGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSQSDTS*WPGVGK
Trigger: CTTCCCTACTCCAGGCCACCAGCTGGTGTCAGATTG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACGGATGCAGTGGAAGTaGCTGTTCACCTGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSRMQWK*LFTWLY
Trigger: GTACAACCAGGTGAACAGCCACTTCCACTGCATCCG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR GCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATCATCACGTCAGACGTaGTCGTGTACACCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSSSRQT*SCTPCY
Trigger: GTAACAAGGTGTACACGAGCACGTCTGACGTGATGA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CCA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAAAGAGACAGTGGAAGTaGAACTTGTTGGCGTACTTG +
Preference number: 4 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSKRQWK*NLLAYL
Trigger: CAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp TCGCCCGCGTCGCCCAGCGCCAGGCCCAGGCCGGCGGCCGCCGACTaGAGGAAGAGCAGCGAGCCCGGCTCGGCGCCCAGCGACAGGGAG +
Preference number: 5 (lower is better)
Translates to: SPASPSARPRPAAAD*RKSSEPGSAPSDRE
Trigger: CTCCCTGTCGCTGGGCGCCGAGCCGGGCTCGCTGCTCTTCCTGCAGTCGGCGGCCGCCGGCCTGGGCCTGGCGCTGGGCGACGCGGGCGA
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp CGGGCTGCCCCAGACTCAGGGCCACTGCGCTCTTGGTCCCGGGGCTaGGATGGGCTGCCCTCCGTGTGGGAGCCGGCGTCAGCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: RAAPDSGPLRSWSRG*DGLPSVWEPASARF
Trigger: GAAGCGAGCTGACGCCGGCTCCCACACGGAGGGCAGCCCATCGCAGCCCCGGGACCAAGAGCGCAGTGGCCCTGAGTCTGGGGCAGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS GCA 90 bp TCTCCAGGTGGGCCGTGCTGCTGGGCAGCCGCAGGCCGGGCAGGGTaGCCACCACCTCCTTGCCCACCCGCTCCTCGGTCTTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SPGGPCCWAAAGRAG*PPPPCPPAPRSWCW
Trigger: CCAGCACCAAGACCGAGGAGCGGGTGGGCAAGGAGGTGGTGGGCACCCTGCCCGGCCTGCGGCTGCCCAGCAGCACGGCCCACCTGGAGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 90 bp GCGTGGCCGGCGAGAAGGATGGAGTCGCTGGCGGCTGCGGGGCCGTaGGGGCAGCCTCATCACCAGCGGCCGCAGGAGGAGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: AWPARRMESLAAAGP*GQPHHQRPQEEEEE
Trigger: CTCCTCTTCCTCCTCCTGCGGCCGCTGGTGATGAGGCTGCCCGCACGGCCCCGCAGCCGCCAGCGACTCCATCCTTCTCGCCGGCCACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS GCA 90 bp GTGGTGCTGGCGGCAAAGGGAGGAATCCACCGGCCCCAGCGAGAGTaGAGGGCGCGGGCCGGGCCTGCCCTACACCGGGCCGCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: VVLAAKGGIHRPQRE*RARAGPALHRAASD
Trigger: ATCAGAGGCGGCCCGGTGTAGGGCAGGCCCGGCCCGCGCCCTGCACTCTCGCTGGGGCCGGTGGATTCCTCCCTTTGCCGCCAGCACCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472814.1
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGGGCCGCTGTCCTCCTaGGAGGCTGCCCCGTCCGAA +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPGPLSS*EAAPSE
Trigger: TTCGGACGGGGCAGCCTCCAAGGAGGACAGCGGCCC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGAGAACCGCGCCCGCTaGCTGAGGGTATCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLENRAR*LRVSSE
Trigger: CTCCGAGGATACCCTCAGCAAGCGGGCGCGGTTCTC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp GGCGCGGGGCCCTCTGCCGCGGGCTCGCCGCGCTCCTGCTTCTCGTaGTTGCGCTTGTGCGAGTCCATCTGCGACATGCCCACCACCGTG +
Preference number: 5 (lower is better)
Translates to: GAGPSAAGSPRSCFS*LRLCESICDMPTTV
Trigger: CACGGTGGTGGGCATGTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGAGCGCGGCGAGCCCGCGGCAGAGGGCCCCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp GGCCGCAGGAGGAGGAAGAGGAGGAGGAGGAGGAGCCGGGCAGCCTaGCGCGGTGCTCTCGTTACCCACGGGGGTGCTGGAGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: GRRRRKRRRRRSRAA*RGALVTHGGAGAAP
Trigger: CGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGCTGCCCGGCTCCTCCTCCTCCTCCTCTTCCTCCTCCTGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS-3UTR CAA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCCAGGGCCAGGGGGATaGAGCCAGGCAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SALASTYSRDARGTRDSRPGPGG*SQAGPG
Trigger: CCCAGGGCCTGCCTGGCTCAATCCCCCTGGCCCTGG...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS GCA 90 bp CGGGGCCCTCTGCCGCGGGCTCGCCGCGCTCCTGCTTCTCGTGCTTaGGCTTGTGCGAGTCCATCTGCGACATGCCCACCACCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: RGPLPRARRAPASRA*ACASPSATCPPPCG
Trigger: GCCACACGGTGGTGGGCATGTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGAGCGCGGCGAGCCCGCGGCAGAGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp AGGTTGGGCCACCCGGGGAGGGCAGGAGTCCGGGCAGGGCCTGAGTaGAGCCTCCTTACTGTGGCCACCCCGGGCACACCAGGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: RLGHPGRAGVRAGPE*SLLTVATPGTPGSL
Trigger: CAGGCTTCCTGGTGTGCCCGGGGTGGCCACAGTAAGGAGGCTGCACTCAGGCCCTGCCCGGACTCCTGCCCTCCCCGGGTGGCCCAACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CCA 90 bp GCATCTGGACACTGCTGTGCGACGGCAGGGGCAGGATGGTGGCCTTaGTCTCCAGGTGGGCCGTGCTGCTGGGCAGCCGCAGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: ASGHCCATAGAGWWP*SPGGPCCWAAAGRA
Trigger: TGCCCGGCCTGCGGCTGCCCAGCAGCACGGCCCACCTGGAGACCAAGGCCACCATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCACCTGGCGGCTCAGCTaGGCGCAGATGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPTWRLS*AQMAFS
Trigger: GCTGAACGCCATCTGCGCCAAGCTGAGCCGCCAGGT...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACAGGGCCACTGCGCTCTaGGTCCCGGGGCTGCGATGG +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDRATAL*VPGLRW
Trigger: CCATCGCAGCCCCGGGACCAAGAGCGCAGTGGCCCT...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGAGGGCACCGCCGTCCTaGGAGGGCTCCTCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQRAPPS*EGSSAW
Trigger: CCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCCT...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCTGGTGCTGCGCGTGCTaGTACATGTGCGTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPWCCAC*YMCVRP
Trigger: CGGGCGCACGCACATGTACAAGCACGCGCAGCACCA...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGGGCTACTCTGGGTTTaGGACGCAGCCTCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLGLLWV*DAASVS
Trigger: GGAAACCGAGGCTGCGTCCAAAACCCAGAGTAGCCC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 90 bp AGAGTGCAGGGCGCGGGCCGGGCCTGCCCTACACCGGGCCGCCTCTaGTCACGTTTTCAGGGCCACTGCCCGCCAGCGCAGACAATGCTG +
Preference number: 5 (lower is better)
Translates to: RVQGAGRACPTPGRL*SRFQGHCPPAQTML
Trigger: CAGCATTGTCTGCGCTGGCGGGCAGTGGCCCTGAAAACGTGATCAGAGGCGGCCCGGTGTAGGGCAGGCCCGGCCCGCGCCCTGCACTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472814.1
CDS GCA 90 bp CCAGCCTCGGTGGCGGCAGTGGCGGCAGCCAGGGACGCAGAGGACTaGTGGCTGGTAGGGGAGGCGCTCAGGCTGGAGTTCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PASVAAVAAARDAED*WLVGEALRLEFLLL
Trigger: GAGCAGCAAGAACTCCAGCCTGAGCGCCTCCCCTACCAGCCAGCAGTCCTCTGCGTCCCTGGCTGCCGCCACTGCCGCCACCGAGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 90 bp GAGGAGGAAGAGGAGGAGGAGGAGGAGCCGGGCAGCCTGCCGCGGTaGTCTCGTTACCCACGGGGGTGCTGGAGCAGCTCCGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: EEEEEEEEEPGSLPR*SRYPRGCWSSSGPW
Trigger: CCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGCTGCCCGGCTCCTCCTCCTCCTCCTCTTCCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS CCA 90 bp AGTCAACAAGGTCGTCGTTGCTGGACTCCTCGTGCTCCGTGTCCTTaGCGCCCAGCAGCGAGGGCGGCAGCCCCAGCGCGCCCGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SQQGRRCWTPRAPCP*RPAARAAAPARPRS
Trigger: GCTCCTCGGGCGCGCTGGGGCTGCCGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS-3UTR CAA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGAGGGCACCGCCGTCCTaGGAGGGCTCCTCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: EEANTEARRETQPSLSGWRAPPS*EGSSAW
Trigger: CCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCCT...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTCGTGCTCCGTGTCCTaGGCGCCCAGCAGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQSCSVS*APSSEG
Trigger: GCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCAGCGCCTTCACGGCCTaGCCTAGGAAGGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFSAFTA*PRKGEG
Trigger: GCCCTCGCCCTTCCTAGGCAAGGCCGTGAAGGCGCT...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGCCGTCTTCCGCCGCTaGCCGAAGGGCGACATGTCC +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDAVFRR*PKGDMS
Trigger: GGACATGTCGCCCTTCGGCAAGCGGCGGAAGACGGC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCGATGCGCCGTGACCTaGGTGCTGTCGGTGCAGCGG +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDRCAVT*VLSVQR
Trigger: CCGCTGCACCGACAGCACCAAGGTCACGGCGCATCG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCTGATCACGTCCTGTTaGCCGTGGTGCTTGCGATGC +
Preference number: 5 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLLITSC*PWCLRC
Trigger: GCATCGCAAGCACCACGGCAAACAGGACGTGATCAG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGTGCGAGCACTTGAGCTaGTACTTGCAGTCGGGCACG +
Preference number: 5 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLCEHLS*YLQSGT
Trigger: CGTGCCCGACTGCAAGTACAAGCTCAAGTGCTCGCA...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp GGTCATGGTGGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCTCTCCTaGAGAGGAGGATGGGGGCGCATCACCTCTGGGAGGGAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GHGGGRVVPQRGGLS*RGGWGRITSGREWE
Trigger: CTCCCACTCCCTCCCAGAGGTGATGCGCCCCCATCCTCCTCTGCAGGAGAGGCCTCCTCGCTGCGGGACTACGCGGCCTCCACCATGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CCA 90 bp GAGGCAGCTCCAGGCCCTCGCGGGCAATCCGCCCCAACACGGGTGTaGGTGCCGGCTCCTCGCTGTACTCCCCGTTCACCCACTTCTCGA +
Preference number: 5 (lower is better)
Translates to: EAAPGPRGQSAPTRV*VPAPRCTPRSPTSR
Trigger: TCGAGAAGTGGGTGAACGGGGAGTACAGCGAGGAGCCGGCACCCACACCCGTGTTGGGGCGGATTGCCCGCGAGGGCCTGGAGCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS CCA 90 bp AGGCTGCCCCGTCCGAATCCTTCTCCTCCAGGGCACCGCCGTCCTTaGAGGGCTCCTCCGCGTGGTCTTCCTCATCGCTGCACCCCTGGG +
Preference number: 5 (lower is better)
Translates to: RLPRPNPSPPGHRRP*RAPPRGLPHRCTPG
Trigger: CCCAGGGGTGCAGCGATGAGGAAGACCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCCTGGAGGAGAAGGATTCGGACGGGGCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS CCA 90 bp GGTTCTGCATCTGGACACTGCTGTGCGACGGCAGGGGCAGGATGGTaGCCTTGGTCTCCAGGTGGGCCGTGCTGCTGGGCAGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: GSASGHCCATAGAGW*PWSPGGPCCWAAAG
Trigger: GCCTGCGGCTGCCCAGCAGCACGGCCCACCTGGAGACCAAGGCCACCATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 90 bp TTGAGCCAGGCAGGCCCTGGGGCAGCAGCCCCGAGATCTTGCTGTTaGGAGGTTTGGTGGCACTGGGCCCAGCCTCGGTGGCGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LSQAGPGAAAPRSCC*EVWWHWAQPRWRQW
Trigger: CCACTGCCGCCACCGAGGCTGGGCCCAGTGCCACCAAACCTCCCAACAGCAAGATCTCGGGGCTGCTGCCCCAGGGCCTGCCTGGCTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp CTGAGTCTCCAGCTCCCGAGGCGACCAGCGTGGGTGTGTCAGGGGTaGCTGAGGCTGCTGACCCAGACGACACGGCACCCAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LSLQLPRRPAWVCQG*LRLLTQTTRHPGGW
Trigger: CCAGCCTCCTGGGTGCCGTGTCGTCTGGGTCAGCAGCCTCAGCCACCCCTGACACACCCACGCTGGTCGCCTCGGGAGCTGGAGACTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp GAGCCGGGCAGCCTGCCGCGGTGCTCTCGTTACCCACGGGGGTGCTaGAGCAGCTCCGGTCCATGGTGGATGACTCAGAGGACATGGCGC +
Preference number: 5 (lower is better)
Translates to: EPGSLPRCSRYPRGC*SSSGPWWMTQRTWR
Trigger: GCGCCATGTCCTCTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGCTGCCCGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS-3UTR CAA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGGGGATGGAGGAGTCTTaGCCTTCAGTCAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLGMEES*PSVSKV
Trigger: GACCTTGCTGACTGAAGGCAAAGACTCCTCCATCCC...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACCTGGCGGCTCAGCTaGGCGCAGATGGCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GLLAPLLAPTPETRGERGTWRLS*AQMAFS
Trigger: GCTGAACGCCATCTGCGCCAAGCTGAGCCGCCAGGT...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGGAGAACCGCGCCCGCTaGCTGAGGGTATCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GLLAPLLAPTPETRGERGENRAR*LRVSSE
Trigger: CTCCGAGGATACCCTCAGCAAGCGGGCGCGGTTCTC...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCACCCGCTCCTCGGTCTaGGTGCTGGGGGCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVTRSSV*VLGAGQ
Trigger: CTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGGT...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTGGCAGGATGGTGGCCTaGGTCTCCAGGTGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPGRMVA*VSRWAV
Trigger: CACGGCCCACCTGGAGACCAAGGCCACCATCCTGCC...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCCCTCCGCTTCCGCCTaGATGTTCAGCAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GLLAPLLAPTPETRGERGPSASA*MFSRLP
Trigger: GGGCAGCCTGCTGAACATCAAGGCGGAAGCGGAGGG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGGGGCCATGGGAGGTTaGGTCTCGGCGGCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQGAMGG*VSAAEA
Trigger: GGCCTCGGCCGCCGAGACCAAACCTCCCATGGCCCC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCGAGGCCTTGAAGCGCTaGAAGTCGTCCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPEALKR*KSSSTR
Trigger: CCTGGTGCTGGACGACTTCAAGCGCTTCAAGGCCTC...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCCACTTGAGCTTGTACTaGCAGTCGGGCACGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPHLSLY*QSGTAQ
Trigger: CTGCGCCGTGCCCGACTGCAAGTACAAGCTCAAGTG...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp CAGCTCCAGGCCCTCGCGGGCAATCCGCCCCAACACGGGTGTGGGTaGCGGCTCCTCGCTGTACTCCCCGTTCACCCACTTCTCGATCAC +
Preference number: 5 (lower is better)
Translates to: QLQALAGNPPQHGCG*RLLAVLPVHPLLDH
Trigger: GTGATCGAGAAGTGGGTGAACGGGGAGTACAGCGAGGAGCCGGCACCCACACCCGTGTTGGGGCGGATTGCCCGCGAGGGCCTGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS GCA 90 bp GTGGGCAGCATGGAGGAGGTGGCTGCCTCCGGGGTGGAGCCCGCGTaGAGCTTCTCAAAGCTGATCTTCCTGGCCAGCTCGTCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: VGSMEEVAASGVEPA*SFSKLIFLASSSRV
Trigger: CACGCGGGACGAGCTGGCCAGGAAGATCAGCTTTGAGAAGCTGCACGCGGGCTCCACCCCGGAGGCAGCCACCTCCTCCATGCTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 90 bp CTCAGGGCGGAGAAGTCAACAAGGTCGTCGTTGCTGGACTCCTCGTaGTCCGTGTCCTTGGCGCCCAGCAGCGAGGGCGGCAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: LRAEKSTRSSLLDSS*SVSLAPSSEGGSPS
Trigger: GCTGGGGCTGCCGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGACTTCTCCGCCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 90 bp TTGGTGCTGTCGGTGCAGCGGAAGCGGCAGCGCAGGCAGTGGAAGTaGGTGCTGGTGCCCGAGAAGGGGCAGTCGGCGAAGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LVLSVQRKRQRRQWK*VLVPEKGQSAKWQL
Trigger: CAGCTGCCACTTCGCCGACTGCCCCTTCTCGGGCACCAGCACGCACTTCCACTGCCTGCGCTGCCGCTTCCGCTGCACCGACAGCACCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp GAGGAGCCGGGCAGCCTGCCGCGGTGCTCTCGTTACCCACGGGGGTaGTGGAGCAGCTCCGGTCCATGGTGGATGACTCAGAGGACATGG +
Preference number: 5 (lower is better)
Translates to: EEPGSLPRCSRYPRG*WSSSGPWWMTQRTW
Trigger: CCATGTCCTCTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGCTGCCCGGCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS CCA 90 bp CCAGGTTCTGCATCTGGACACTGCTGTGCGACGGCAGGGGCAGGATaGTGGCCTTGGTCTCCAGGTGGGCCGTGCTGCTGGGCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: PGSASGHCCATAGAG*WPWSPGGPCCWAAA
Trigger: TGCGGCTGCCCAGCAGCACGGCCCACCTGGAGACCAAGGCCACCATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGAACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 90 bp AGATCTTGCTGTTGGGAGGTTTGGTGGCACTGGGCCCAGCCTCGGTaGCGGCAGTGGCGGCAGCCAGGGACGCAGAGGACTGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RSCCWEVWWHWAQPR*RQWRQPGTQRTAGW
Trigger: CCAGCCAGCAGTCCTCTGCGTCCCTGGCTGCCGCCACTGCCGCCACCGAGGCTGGGCCCAGTGCCACCAAACCTCCCAACAGCAAGATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp GGCTCCTTCACAGTCAGGTCTAGACTGCGGTCCTGGGAGGCTTCGTaGGGGCCTGGGGCGCCGGTGCTCTCACCGGGTTCCGGCTTCACT +
Preference number: 5 (lower is better)
Translates to: GSFTVRSRLRSWEAS*GPGAPVLSPGSGFT
Trigger: AGTGAAGCCGGAACCCGGTGAGAGCACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGACCGCAGTCTAGACCTGACTGTGAAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000490176.1
CDS CCA 90 bp GTGACCTTGGTGCTGTCGGTGCAGCGGAAGCGGCAGCGCAGGCAGTaGAAGTGCGTGCTGGTGCCCGAGAAGGGGCAGTCGGCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: VTLVLSVQRKRQRRQ*KCVLVPEKGQSAKW
Trigger: CCACTTCGCCGACTGCCCCTTCTCGGGCACCAGCACGCACTTCCACTGCCTGCGCTGCCGCTTCCGCTGCACCGACAGCACCAAGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp CCCGGCCCTAACTGGGGGCACAGGCTGCTGAGGGAATGTGTGGCCTaGACTACACAGAGCGGAGGGAGGCTCCCAAACGGGCGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PGPNWGHRLLRECVA*TTQSGGRLPNGRAG
Trigger: CCCTGCACGCCCGTTTGGGAGCCTCCCTCCGCTCTGTGTAGTCCAGGCCACACATTCCCTCAGCAGCCTGTGCCCCCAGTTAGGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCAAAATGTGTGTGTGTTaGGGATGGAGCGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPKMCVC*GWSAAG
Trigger: GCCCGCGGCGCTCCATCCCAAACACACACACATTTT...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGGTGGGCAGTCCGTTCTaGACAGTGGAGACGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SALASTYSRDARGTRDSRVGSPF*TVETVP
Trigger: GGGGACCGTCTCCACTGTCAAGAACGGACTGCCCAC...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGTGGGCAGGCCCGAGTaGGAGAGGGCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDVGRPE*ERARAR
Trigger: CCTGGCCCTGGCCCTCTCCAACTCGGGCCTGCCCAC...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp ACCGCCGCCGCCTGTGTCCTCGGCCGCGGAGCACCAGAGGGGTCCCCGCCTCTGCAGTGGAAGTGGAACTaGTTGGCGTACTTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: TAAACVLGRGAPEGSPPLQWKWN*LAYLQS
Trigger: GGACTGCAAGTACGCCAACAAGTTCCACTTCCACTG...CAGAGGCGGGGACCCCTCTGGTGCTCCGCGGCCGAGGACACAGGCGGCGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp GATTCGTTGCTGGGCTCCTTCACAGTCAGGTCTAGACTGCGGTCCTaGGAGGCTTCGTGGGGGCCTGGGGCGCCGGTGCTCTCACCGGGT +
Preference number: 5 (lower is better)
Translates to: DSLLGSFTVRSRLRS*EASWGPGAPVLSPG
Trigger: ACCCGGTGAGAGCACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGACCGCAGTCTAGACCTGACTGTGAAGGAGCCCAGCAACGAATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000490176.1
CDS CCA 90 bp TGCACCCTACTCAAGGCTCTGTGTGACAGCAGGACCCAGGCAAGCTaGGGGAGCTGCACTCACCTGTGGCCAGGCCCTGCGTCGGGACCC +
Preference number: 5 (lower is better)
Translates to: CTLLKALCDSRTQAS*GSCTHLWPGPASGP
Trigger: GGGTCCCGACGCAGGGCCTGGCCACAGGTGAGTGCAGCTCCCCCAGCTTGCCTGGGTCCTGCTGTCACACAGAGCCTTGAGTAGGGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS-3UTR CAA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGGGCCGCTGTCCTCCTaGGAGGCTGCCCCGTCCGAA +
Preference number: 5 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDGPLSS*EAAPSE
Trigger: TTCGGACGGGGCAGCCTCCAAGGAGGACAGCGGCCC...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGAGCTGCTCGCCAGCCTaGAGCTTGCGGATGTACTCC +
Preference number: 5 (lower is better)
Translates to: SALASTYSRDARGTRDSRSCSPA*SLRMYS
Trigger: GGAGTACATCCGCAAGCTCAAGGCTGGCGAGCAGCT...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCTGCCCTCCCCGGGTTaGAAGAGGTGCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: GLLAPLLAPTPETRGERGLPSPG*KRCRYL
Trigger: CAAGTACCTGCACCTCTTCAAACCCGGGGAGGGCAG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCCGTGCTGCAGGGAGTaGTCGCGCTTCTTGTGCATG +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDPCCRE*SRFLCM
Trigger: CATGCACAAGAAGCGCGACAACTCCCTGCAGCACGG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACTGTTTGCCGTGGTGCTaGCGATGCGCCGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDCLPWC*RCAVTL
Trigger: CAAGGTCACGGCGCATCGCAAGCACCACGGCAAACA...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp CTGCCCGCTTCCTGGGTCAAAGGTGGCAGAGGGCTTGAGGGCAGCTaGAGCCAGCCTGGCCATCATGGGCGAGATGAGGCCCTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: LPASWVKGGRGLEGS*SQPGHHGRDEALAC
Trigger: GCAAGCAAGGGCCTCATCTCGCCCATGATGGCCAGGCTGGCTGCAGCTGCCCTCAAGCCCTCTGCCACCTTTGACCCAGGAAGCGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS GCA 90 bp CTCTGCAGCCTGAGGCCAGGTGGCCACCCCAGTCCAGAAGGTGCCTaGTTTCTGGGCAGGACCCAGCCTGCTCACCTGGGTCAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LCSLRPGGHPSPEGA*FLGRTQPAHLGQRW
Trigger: CCACCTTTGACCCAGGTGAGCAGGCTGGGTCCTGCCCAGAAAGCAGGCACCTTCTGGACTGGGGTGGCCACCTGGCCTCAGGCTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS CCA 90 bp CTGAACTGGCAGAAGCCCGCGGCGCTGATCACGTCCTGTTTGCCGTaGTGCTTGCGATGCGCCGTGACCTTGGTGCTGTCGGTGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LNWQKPAALITSCLP*CLRCAVTLVLSVQR
Trigger: CCGCTGCACCGACAGCACCAAGGTCACGGCGCATCGCAAGCACCACGGCAAACAGGACGTGATCAGCGCCGCGGGCTTCTGCCAGTTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTGCACTTGGGGCGGCTTaGGGTGACTTTCCAAGTCCG +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPALGAA*GDFPSP
Trigger: CGGACTTGGAAAGTCACCCAAAGCCGCCCCAAGTGC...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGATGAAGAAGTCGTACTaGGAGGCCCGGGCTACCAGG +
Preference number: 5 (lower is better)
Translates to: GLLAPLLAPTPETRGERGMKKSY*EARATR
Trigger: CCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCAT...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGAAGGGCGCCCCACCTaGCCTGTCTTGAAGGCGATG +
Preference number: 5 (lower is better)
Translates to: EEANTEARRETQPSLSGWEGRPT*PVLKAM
Trigger: CATCGCCTTCAAGACAGGCAAGGTGGGGCGCCCTTC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTCCGTGCTGCAGGGAGTaGTCGCGCTTCTTGTGCATG +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPPCCRE*SRFLCM
Trigger: CATGCACAAGAAGCGCGACAACTCCCTGCAGCACGG...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCTCAGGCTGGAGTTCTaGCTGCTCAGGGCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQLRLEF*LLRAEK
Trigger: CTTCTCCGCCCTGAGCAGCAAGAACTCCAGCCTGAG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGTGGAAGTTTGCGTGCTaGATGGCCCCGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GLLAPLLAPTPETRGERGWKFAC*MAPSKV
Trigger: CACCTTGGACGGGGCCATCAAGCACGCAAACTTCCA...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTCTCTAGAGAAGTCGTaGCCAAGGGCGAGGCGGGCA +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPSLEKS*PRARRA
Trigger: TGCCCGCCTCGCCCTTGGCAACGACTTCTCTAGAGA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCGGCCTCCTAGCGCCCTaGCTAGCACCTACTCCCGAG +
Preference number: 5 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVGLLAP*LAPTPE
Trigger: CTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGTTGTCAGGCTGGGAGTaGTCCTCTGAGGACCACCAC +
Preference number: 5 (lower is better)
Translates to: SALASTYSRDARGTRDSRLSGWE*SSEDHH
Trigger: GTGGTGGTCCTCAGAGGACAACTCCCAGCCTGACAA...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCTTCACCTGGTTGTACTaGCAACCTAGCCTGCCACAC +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPFTWLY*QPSLPH
Trigger: GTGTGGCAGGCTAGGTTGCAAGTACAACCAGGTGAA...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp CCCACCCGCTCCTCGGTCTTGGTGCTGGGGGCCGGCCAGGAGAGCTaGTCGCCAGCCTTGAGCTTGCGGATGTACTCCTCATACTTAGAG +
Preference number: 5 (lower is better)
Translates to: PTRSSVLVLGAGQES*SPALSLRMYSSYLE
Trigger: CTCTAAGTATGAGGAGTACATCCGCAAGCTCAAGGCTGGCGAGCAGCTCTCCTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 90 bp GGCCATTTGATTCGTTGCTGGGCTCCTTCACAGTCAGGTCTAGACTaGGGTCCTGGGAGGCTTCGTGGGGGCCTGGGGCGCCGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GHLIRCWAPSQSGLD*GPGRLRGGLGRRCS
Trigger: AGAGCACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGACCGCAGTCTAGACCTGACTGTGAAGGAGCCCAGCAACGAATCAAATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000490176.1
CDS GCA 90 bp GGTTGTCCACGCGGTCGTGGTGCTGCGCGTGCTTGTACATGTGCGTaGGCCCGCAGAACTTGTAGCCGCAGTTCTCGCGCGTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: GCPRGRGAARACTCA*ARRTCSRSSRACSG
Trigger: ACCACTGCACGCGCGAGAACTGCGGCTACAAGTTCTGCGGGCGCACGCACATGTACAAGCACGCGCAGCACCACGACCGCGTGGACAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp AGCCTGCTCACCTGGGTCAAAGGTGGCAGAGGGCTTGAGGGCAGCTaGAGCCAGCCTGGCCATCATGGGCGAGATGAGGCCCTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SLLTWVKGGRGLEGS*SQPGHHGRDEALAC
Trigger: GCAAGCAAGGGCCTCATCTCGCCCATGATGGCCAGGCTGGCTGCAGCTGCCCTCAAGCCCTCTGCCACCTTTGACCCAGGTGAGCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS GCA 90 bp TCTGCTCTGCAGCCTGAGGCCAGGTGGCCACCCCAGTCCAGAAGGTaGCTGCTTTCTGGGCAGGACCCAGCCTGCTCACCTGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SALQPEARWPPQSRR*LLSGQDPACSPGSK
Trigger: CTTTGACCCAGGTGAGCAGGCTGGGTCCTGCCCAGAAAGCAGGCACCTTCTGGACTGGGGTGGCCACCTGGCCTCAGGCTGCAGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS CCA 90 bp AGATGGTGTTCCCTGCCGCGGTGCTCTCGTTACCCACGGGGGTGCTaGAGCAGCTCCGGTCCATGGTGGATGACTCAGAGGACATGGCGC +
Preference number: 5 (lower is better)
Translates to: RWCSLPRCSRYPRGC*SSSGPWWMTQRTWR
Trigger: GCGCCATGTCCTCTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGGAACACCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp GTCCAGAAGGTGCCTGCTTTCTGGGCAGGACCCAGCCTGCTCACCTaGGTCAAAGGTGGCAGAGGGCTTGAGGGCAGCTGCAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VQKVPAFWAGPSLLT*VKGGRGLEGSCSQP
Trigger: AGGCTGGCTGCAGCTGCCCTCAAGCCCTCTGCCACCTTTGACCCAGGTGAGCAGGCTGGGTCCTGCCCAGAAAGCAGGCACCTTCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTCTGTTTGCCTGCACTaGGGGCGGCTTTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPSVCLH*GRLWVT
Trigger: AGTCACCCAAAGCCGCCCCAAGTGCAGGCAAACAGA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGGTCAGCAAGGTCTGTTaGCCTGCACTTGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: EEANTEARRETQPSLSGWVSKVC*PALGAA
Trigger: AGCCGCCCCAAGTGCAGGCAAACAGACCTTGCTGAC...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGGGGATGGAGGAGTCTTaGCCTTCAGTCAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: SALASTYSRDARGTRDSRGMEES*PSVSKV
Trigger: GACCTTGCTGACTGAAGGCAAAGACTCCTCCATCCC...CCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATCACTGCCCGTCTCTaGTCTTCCTCGCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQITARL*SSSLRG
Trigger: CCCCCGCAGCGAGGAAGACAAGAGACGGGCAGTGAT...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGACCCGCTCCTCGGTCTaGGTGCTGGGGGCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGTRSSV*VLGAGQ
Trigger: CTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGGT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGCCGGGAGCTGCGCCGCATTCGCCCGGGACCCCTGCTCCTAGGTTCCCTACCCAAGAGGTGCAGGTACTaGACATTCTCCAGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: GRELRRIRPGPLLLGSLPKRCRY*TFSRSY
Trigger: GTACGACCTGGAGAATGTCAAGTACCTGCACCTCTT...GGGTAGGGAACCTAGGAGCAGGGGTCCCGGGCGAATGCGGCGCAGCTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGAAGGGCGCCCCACCTaGCCTGTCTTGAAGGCGATG +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQEGRPT*PVLKAM
Trigger: CATCGCCTTCAAGACAGGCAAGGTGGGGCGCCCTTC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGTCGTGCTCCGTGTCCTaGGCGCCCAGCAGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWSCSVS*APSSEG
Trigger: GCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGA...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTTCAACAAGGTCGTCGTaGCTGGACTCCTCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPSTRSS*LDSSCS
Trigger: GGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGA...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGCGGGCCTCTGTGTTTCCTTTaGCTGCTCCTCCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: GLLAPLLAPTPETRGERGPLCFL*LLLPLS
Trigger: GGACAGAGGGAGGAGCAGCAAAAGGAAACACAGAGG...CCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATCCAGAAGCGCTTTTaGGCCCCCGAGGCTGTCGGC +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQIQKRF*APEAVG
Trigger: GCCGACAGCCTCGGGGGCCAAAAAGCGCTTCTGGAT...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGCGCATCCTTCCTGTTaGCACCACCAGGGTGGCCGA +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQAHPSC*HHQGGR
Trigger: TCGGCCACCCTGGTGGTGCAAACAGGAAGGATGCGC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 90 bp AGGTGGCTGCCTCCGGGGTGGAGCCCGCGTGCAGCTTCTCAAAGCTaGTCTTCCTGGCCAGCTCGTCCCGCGTGTTCTGGTCATCATAGC +
Preference number: 5 (lower is better)
Translates to: RWLPPGWSPRAASQS*SSWPARPACSGHHS
Trigger: GCTATGATGACCAGAACACGCGGGACGAGCTGGCCAGGAAGATCAGCTTTGAGAAGCTGCACGCGGGCTCCACCCCGGAGGCAGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS TCA 90 bp CCAAACCTGCGCAGGTACACCTTCCAGGGCTCTGCCAACTTCTCCTaGACCAGCGCCTTCACGGCCTTGCCTAGGAAGGGCGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PNLRRYTFQGSANFS*TSAFTALPRKGEGS
Trigger: GGAGCCCTCGCCCTTCCTAGGCAAGGCCGTGAAGGCGCTGGTTCAGGAGAAGTTGGCAGAGCCCTGGAAGGTGTACCTGCGCAGGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS TCA 90 bp CGTGCTGGTGCCCGAGAAGGGGCAGTCGGCGAAGTGGCAGCTGAGTaGGGCCTTGAAGCGCTTGAAGTCGTCCAGCACCAGGTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: RAGAREGAVGEVAAE*GLEALEVVQHQVVH
Trigger: GTGGACAACCTGGTGCTGGACGACTTCAAGCGCTTCAAGGCCTCACTCAGCTGCCACTTCGCCGACTGCCCCTTCTCGGGCACCAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp TCCTGGCCAGCTCGTCCCGCGTGTTCTGGTCATCATAGCCAAACATaGCGAGGAACTCGGTCATGGTGGAGGCCGCGTAGTCCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: SWPARPACSGHHSQT*RGTRSWWRPRSPAA
Trigger: CGCTGCGGGACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATGACCAGAACACGCGGGACGAGCTGGCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 90 bp AGCTGCAGCCAGCCTGGCCATCATGGGCGAGATGAGGCCCTTGCTTaGAGAGATCCTCTCCATGATGGAGGCGGGTGGTGCCGGGACAGA +
Preference number: 5 (lower is better)
Translates to: SCSQPGHHGRDEALA*RDPLHDGGGWCRDR
Trigger: TCTGTCCCGGCACCACCCGCCTCCATCATGGAGAGGATCTCTGCAAGCAAGGGCCTCATCTCGCCCATGATGGCCAGGCTGGCTGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp AGTTCTTGCTGCTCAGGGCGGAGAAGTCAACAAGGTCGTCGTTGCTaGACTCCTCGTGCTCCGTGTCCTTGGCGCCCAGCAGCGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SSCCSGRRSQQGRRC*TPRAPCPWRPAARA
Trigger: CGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGACTTCTCCGCCCTGAGCAGCAAGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp CAGTGGAAGTGCGTGCTGGTGCCCGAGAAGGGGCAGTCGGCGAAGTaGCAGCTGAGTGAGGCCTTGAAGCGCTTGAAGTCGTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: QWKCVLVPEKGQSAK*QLSEALKRLKSSST
Trigger: GGTGCTGGACGACTTCAAGCGCTTCAAGGCCTCACTCAGCTGCCACTTCGCCGACTGCCCCTTCTCGGGCACCAGCACGCACTTCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp GCAGGGCAGCCCTCGGTGCGGTGGAGGGACCGAAGTGGATGGGGATaGGAGGAGGCAGCTACCTTGGCCCTAGAGGTCAGATATCAAACG +
Preference number: 5 (lower is better)
Translates to: AGQPSVRWRDRSGWG*EEAATLALEVRYQT
Trigger: CGTTTGATATCTGACCTCTAGGGCCAAGGTAGCTGCCTCCTCCCATCCCCATCCACTTCGGTCCCTCCACCGCACCGAGGGCTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS-3UTR CAA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAACGTGCTGCTGGGGAGTaGCAGGAGCCCCTTGTAAAG +
Preference number: 5 (lower is better)
Translates to: EQGLLAPLLAPTPETRGERAAGE*QEPLVK
Trigger: CTTTACAAGGGGCTCCTGCAACTCCCCAGCAGCACG...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGTGTCACTTCATCCTTaGCATCCCAAGAGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQVSLHP*HPKRPG
Trigger: CCCTGGCCTCTTGGGATGCAAAGGATGAAGTGACAC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGAAGTGGTTGGTAGCCTaGCTGTACACGCAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: EEANTEARRETQPSLSGWKWLVA*LYTQPS
Trigger: CGAGGGCTGCGTGTACAGCAAGGCTACCAACCACTT...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCCTCAGGCTGGAGTTCTaGCTGCTCAGGGCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVLRLEF*LLRAEK
Trigger: CTTCTCCGCCCTGAGCAGCAAGAACTCCAGCCTGAG...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCCAGGGCCAGGGGGATaGAGCCAGGCAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARPGPGG*SQAGPG
Trigger: CCCAGGGCCTGCCTGGCTCAATCCCCCTGGCCCTGG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGTCTCTAGAGAAGTCGTaGCCAAGGGCGAGGCGGGCA +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQSLEKS*PRARRA
Trigger: TGCCCGCCTCGCCCTTGGCAACGACTTCTCTAGAGA...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAGGTTTGACCTGGGGCTaGGCGTTCTCTAGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: STYSRDARGTRDSRLIEGGLTWG*AFSREV
Trigger: GACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACC...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGGTTTGACCTGGGGCTaGGCGTTCTCTAGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQGLTWG*AFSREV
Trigger: GACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACTGGAAGTGGAACTTGTaGGCGTACTTGCAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDWKWNL*AYLQSV
Trigger: CACGGACTGCAAGTACGCCAACAAGTTCCACTTCCA...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACACGTTCACCAGGTTGTaGTTGGGGTTGATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDTFTRL*LGLMWS
Trigger: GGACCACATCAACCCCAACAACAACCTGGTGAACGT...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp TGGAGTTCTTGCTGCTCAGGGCGGAGAAGTCAACAAGGTCGTCGTTaGTGGACTCCTCGTGCTCCGTGTCCTTGGCGCCCAGCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: WSSCCSGRRSQQGRR*WTPRAPCPWRPAAR
Trigger: CCTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGACTTCTCCGCCCTGAGCAGCAAGAACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 90 bp CTGGCCTGCCTCTACCTTCCCAGCCCTGACAGTTTCACGGTGGCCTaGACCCTACTCAAGGCTCTGTGTGACAGCAGGACCCAGGCAAGC +
Preference number: 5 (lower is better)
Translates to: LACLYLPSPDSFTVA*TLLKALCDSRTQAS
Trigger: GCTTGCCTGGGTCCTGCTGTCACACAGAGCCTTGAGTAGGGTGCAGGCCACCGTGAAACTGTCAGGGCTGGGAAGGTAGAGGCAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CCA 90 bp CCGTCCAAGGTGCTGAAGAGCGCGCCGCATTCCTCCACCACGCAGTaGAAGTGGGCCTTGTGGAGGAAGTCACACTGGCCGTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: PSKVLKSAPHSSTTQ*KWALWRKSHWPSQK
Trigger: CTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGGCGCGCTCTTCAGCACCTTGGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 90 bp GAGGGGAACGCGGGACTCCCGGCTCATCGAGGGACTCACTTCTCCTaGAACTGGAGGAATCCGGGTTTGACCTGGGGCTTGGCGTTCTCT +
Preference number: 5 (lower is better)
Translates to: EGNAGLPAHRGTHFS*NWRNPGLTWGLAFS
Trigger: AGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS CCA 90 bp GCGTGTTCTGGTCATCATAGCCAAACATGCCGAGGAACTCGGTCATaGTGGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCTCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ACSGHHSQTCRGTRS*WRPRSPAARRPLLQ
Trigger: CTGCAGGAGAGGCCTCCTCGCTGCGGGACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATGACCAGAACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS-3UTR CAA 90 bp GAACAGGGCCTCCTAGCGCCCTTGCTAGCACCTACTCCCGAGACGCGAGGGGAAAAAATGTGTGTGTGTTaGGGATGGAGCGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: EQGLLAPLLAPTPETRGEKMCVC*GWSAAG
Trigger: GCCCGCGGCGCTCCATCCCAAACACACACACATTTT...TTCCCCTCGCGTCTCGGGAGTAGGTGCTAGCAAGGGCGCTAGGAGGCCCTGTTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGTCGCCAGCCTTGAGCTaGCGGATGTACTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: EEANTEARRETQPSLSGWSPALS*RMYSSY
Trigger: GTATGAGGAGTACATCCGCAAGCTCAAGGCTGGCGA...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCCCACCTTGCCTGTCTaGAAGGCGATGGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVPTLPV*KAMAPP
Trigger: GGGCGGGGCCATCGCCTTCAAGACAGGCAAGGTGGG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTACCCGTGACTTCCTGTTTTGGAGAAGGTaGACTTCAGGTACTCGGGAG +
Preference number: 5 (lower is better)
Translates to: PLCRPVTAWRGLAPTRDFLFWRR*TSGTRE
Trigger: CTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACAG...GAAGTCACGGGTAGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACCTGTTTTGGAGAAGGTaGACTTCAGGTACTCGGGAG +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDLFWRR*TSGTRE
Trigger: CTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACAG...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGTGGGCAGGCCCGAGTaGGAGAGGGCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTVGRPE*ERARAR
Trigger: CCTGGCCCTGGCCCTCTCCAACTCGGGCCTGCCCAC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGCGTCACAGAAGTCCTTaGTACCAAACCTGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQRHRSP*YQTCAG
Trigger: ACCTGCGCAGGTTTGGTACAAAGGACTTCTGTGACG...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGTGGAAGTTTGCGTGCTaGATGGCCCCGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQWKFAC*MAPSKV
Trigger: CACCTTGGACGGGGCCATCAAGCACGCAAACTTCCA...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAGGGGCCATGGGAGGTTaGGTCTCGGCGGCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPGAMGG*VSAAEA
Trigger: GGCCTCGGCCGCCGAGACCAAACCTCCCATGGCCCC...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGGCCTTGCCAGACGTTTaGCAGACGTACTTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQALPDV*QTYLQF
Trigger: GAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGC...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGCAGTGGGATTCGGCCTaGCCAGACGTTTTGCAGACG +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQQWDSA*PDVLQT
Trigger: CGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTG...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp CTCGGCGGCCGAGGCCGGAAAGGCAGCCTCTGTGTTTCCTTTTGCTaGTCCTCCCTCTGTCCGGAAGTGGAAGTTTGCGTGCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: LGGRGRKGSLCVSFC*SSLCPEVEVCVLDG
Trigger: GCCATCAAGCACGCAAACTTCCACTTCCGGACAGAGGGAGGAGCAGCAAAAGGAAACACAGAGGCTGCCTTTCCGGCCTCGGCCGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS GCA 90 bp GCGCGTGCAGTGGTAGTGGGTGACCTTGAGCGAGAACTGACAAGCTaGGTCCTTGCAGTCCTCGTAAAGGTCGAAGCGCCGGAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: ARAVVVGDLERELTS*VLAVLVKVEAPEAL
Trigger: GAGGGCTTCCGGCGCTTCGACCTTTACGAGGACTGCAAGGACGCAGCTTGTCAGTTCTCGCTCAAGGTCACCCACTACCACTGCACGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp CATCCCAAGAGGCCAGGGTCCGAAGTCCATTCCAACACGTGCTGCTaGGGAGTTGCAGGAGCCCCTTGTAAAGGAGGGGTCGATGGCCGT +
Preference number: 5 (lower is better)
Translates to: HPKRPGSEVHSNTCC*GVAGAPCKGGVDGR
Trigger: ACGGCCATCGACCCCTCCTTTACAAGGGGCTCCTGCAACTCCCCAGCAGCACGTGTTGGAATGGACTTCGGACCCTGGCCTCTTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 90 bp GCGTGTTCTGGTCATCATAGCCAAACATGCCGAGGAACTCGGTCATaGTGGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCTCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: ACSGHHSQTCRGTRS*WRPRSPAARRPLLK
Trigger: CTTCAGGAGAGGCCTCCTCGCTGCGGGACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATGACCAGAACACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp ATGAAGAAGTCGTACTTGGAGGCCCGGGCTACCAGGTTCTGCATCTaGACACTGCTGTGCGACGGCAGGGGCAGGATGGTGGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: MKKSYLEARATRFCI*TLLCDGRGRMVALV
Trigger: GACCAAGGCCACCATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 90 bp GGGTGCTGGAGCAGCTCCGGTCCATGGTGGATGACTCAGAGGACATaGCGCCTGGGCTGCAGCCAGTGTAGTCCATGCACTCATCTGTCT +
Preference number: 5 (lower is better)
Translates to: GCWSSSGPWWMTQRT*RLGCSQCSPCTHLS
Trigger: AGACAGATGAGTGCATGGACTACACTGGCTGCAGCCCAGGCGCCATGTCCTCTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CCA 90 bp TTGAAGCGCTTGAAGTCGTCCAGCACCAGGTTGTCCACGCGGTCGTaGTGCTGCGCGTGCTTGTACATGTGCGTGCGCCCGCAGAACTTG +
Preference number: 5 (lower is better)
Translates to: LKRLKSSSTRLSTRS*CCACLYMCVRPQNL
Trigger: CAAGTTCTGCGGGCGCACGCACATGTACAAGCACGCGCAGCACCACGACCGCGTGGACAACCTGGTGCTGGACGACTTCAAGCGCTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp TGTTCTGGTCATCATAGCCAAACATGCCGAGGAACTCGGTCATGGTaGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCTCTCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: CSGHHSQTCRGTRSW*RPRSPAARRPLLQR
Trigger: CCTCTGCAGGAGAGGCCTCCTCGCTGCGGGACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATGACCAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS-3UTR CAA 90 bp CAGCATCTTTGGCTAGAAGGACATCACCCGATGGCCATGCCCCAGAGAGGCTGGATCACTGCCCGTCTCTaGTCTTCCTCGCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: QHLWLEGHHPMAMPQRGWITARL*SSSLRG
Trigger: CCCCCGCAGCGAGGAAGACAAGAGACGGGCAGTGAT...CCAGCCTCTCTGGGGCATGGCCATCGGGTGATGTCCTTCTAGCCAAAGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGAAAGAGGTGCAGGTACTaGACATTCTCCAGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: STYSRDARGTRDSRLIEGKRCRY*TFSRSY
Trigger: GTACGACCTGGAGAATGTCAAGTACCTGCACCTCTT...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCAGGCTGGATGCAGTGGAAGTGGTaGGTAGCCTTGCTGTACACG +
Preference number: 5 (lower is better)
Translates to: EEANTEARRETQPSLSGWMQWKW*VALLYT
Trigger: CGTGTACAGCAAGGCTACCAACCACTTCCACTGCAT...CCAGCCTGACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAGCGCCTTCACGGCCTaGCCTAGGAAGGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARSAFTA*PRKGEG
Trigger: GCCCTCGCCCTTCCTAGGCAAGGCCGTGAAGGCGCT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGTTTTGCAGACGTACTaGCAGTTCCCAAAGAGACAG +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDVLQTY*QFPKRQ
Trigger: CTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAAC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 90 bp TGTTACAGCCCACCTGCATGCAGTGATAGTGGGTGCTCTTCCCATTaGGGTGGCAGCCGTGGTAGTAGACGCTGCAGTCGTCCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: CYSPPACSDSGCSSH*GGSRGSRRCSRPAG
Trigger: GCCCGCTGGACGACTGCAGCGTCTACTACCACGGCTGCCACCTCAATGGGAAGAGCACCCACTATCACTGCATGCAGGTGGGCTGTAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 90 bp TTTTGGATGAAGAAGTCGTACTTGGAGGCCCGGGCTACCAGGTTCTaGATCTGGACACTGCTGTGCGACGGCAGGGGCAGGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: FWMKKSYLEARATRF*IWTLLCDGRGRMVA
Trigger: GGCCACCATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 90 bp GGTCTCGGCGGCCGAGGCCGGAAAGGCAGCCTCTGTGTTTCCTTTTaGTGCTCCTCCCTCTGTCCGGAAGTGGAAGTTTGCGTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GLGGRGRKGSLCVSF*CSSLCPEVEVCVLD
Trigger: ATCAAGCACGCAAACTTCCACTTCCGGACAGAGGGAGGAGCAGCAAAAGGAAACACAGAGGCTGCCTTTCCGGCCTCGGCCGCCGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS GCA 90 bp CCTGCCACACTCCTCGCGCTTGGTGAAGTATTTGAAGCCATTGGCTaGCCGCCGCTCCGCCTTCTCATGCTTCTTGATGTGCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PATLLALGEVFEAIG*PPLRLLMLLDVPGE
Trigger: CTCCCCTGGCACATCAAGAAGCATGAGAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAAATACTTCACCAAGCGCGAGGAGTGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CCA 90 bp CCTTGTAAAGGAGGGGTCGATGGCCGTGGCAGCTGGGAGGGCAGGTaGGATGGAGGAGTCTTTGCCTTCAGTCAGCAAGGTCTGTTTGCC +
Preference number: 5 (lower is better)
Translates to: PCKGGVDGRGSWEGR*DGGVFAFSQQGLFA
Trigger: GGCAAACAGACCTTGCTGACTGAAGGCAAAGACTCCTCCATCCCACCTGCCCTCCCAGCTGCCACGGCCATCGACCCCTCCTTTACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 90 bp TGTTCTGGTCATCATAGCCAAACATGCCGAGGAACTCGGTCATGGTaGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCTCTCCTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: CSGHHSQTCRGTRSW*RPRSPAARRPLLKP
Trigger: AGGCTTCAGGAGAGGCCTCCTCGCTGCGGGACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATGACCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp CGAGGGACTCACTTCTCCTGGAACTGGAGGAATCCGGGTTTGACCTaGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: RGTHFSWNWRNPGLT*GLAFSREVVAKGEA
Trigger: CGCCTCGCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GCAGCCTCGGTTTCCCTGGGGCGGAGGCTGGGGCCAGGGAGTCGCCAAACAGACGCCGGTCTTCAGTTTTaGGATGAAGAAGTCGTACTT +
Preference number: 5 (lower is better)
Translates to: AASVSLGRRLGPGSRQTDAGLQF*DEEVVL
Trigger: AAGTACGACTTCTTCATCCAAAAACTGAAGACCGGC...GTCTGTTTGGCGACTCCCTGGCCCCAGCCTCCGCCCCAGGGAAACCGAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCCCGGACGTCGTACTaGGAAGGGCGCCCCACCTTG +
Preference number: 5 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPPRTSY*EGRPTL
Trigger: CAAGGTGGGGCGCCCTTCCAAGTACGACGTCCGGGG...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTGTGATGGAGTCTGTTTaGGAGAAGGTTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPVMESV*EKVDFR
Trigger: CCTGAAGTCAACCTTCTCCAAAACAGACTCCATCAC...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACGCAGCCCTCCTTGTCTGGCCATTTGATTCGTaGCTGGGCTCCTTCACAGTC +
Preference number: 5 (lower is better)
Translates to: SHRGGQYGGSEGDAALLVWPFDS*LGSFTV
Trigger: GACTGTGAAGGAGCCCAGCAACGAATCAAATGGCCA...GACAAGGAGGGCTGCGTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAAGAGCTCAGACCACTGTGCAGGCCAGTGACGGCCTGGAGGGGCCTGGCCCCTATAAAAGAGATGAATTaGCCGGGACTGCGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: QELRPLCRPVTAWRGLAPIKEMN*PGLRGH
Trigger: ATGGCCACGCAGTCCCGGCAAATTCATCTCTTTTAT...AGGGGCCAGGCCCCTCCAGGCCGTCACTGGCCTGCACAGTGGTCTGAGCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS TCA 90 bp TGGCGAGGCAAGGATCGTTCTCCTGGAACTGGAGGAATCCGGGTTTaGCCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGCG +
Preference number: 5 (lower is better)
Translates to: WRGKDRSPGTGGIRV*PGAWRSLEKSLPRA
Trigger: CGCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGATCCTTGCCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp GTGCTCCCGTTCTGGGGCCGCAGATTCTCGCCGGTCTTCAGTTTTTaGATGAAGAAGTCGTACTTGGAGGCCCGGGCTACCAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: VLPFWGRRFSPVFSF*MKKSYLEARATRFC
Trigger: GCAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGAGAATCTGCGGCCCCAGAACGGGAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 90 bp AAGGTGCTGAAGAGCGCGCCGCATTCCTCCACCACGCAGTGGAAGTaGGCCTTGTGGAGGAAGTCACACTGGCCGTCACAGAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: KVLKSAPHSSTTQWK*ALWRKSHWPSQKSF
Trigger: AAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGGCGCGCTCTTCAGCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 90 bp AACGCGGGACTCCCGGCTCATCGAGGGACTCACTTCTCCTGGAACTaGAGGAATCCGGGTTTGACCTGGGGCTTGGCGTTCTCTAGAGAA +
Preference number: 5 (lower is better)
Translates to: NAGLPAHRGTHFSWN*RNPGLTWGLAFSRE
Trigger: TTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCCTCGATGAGCCGGGAGTCCCGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS CCA 90 bp AGGCAAGGATCGTTCTCCTGGAACTGGAGGAATCCGGGTTTGACCTaGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: RQGSFSWNWRNPGLT*GLAFSREVVAKGEA
Trigger: CGCCTCGCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGATCCTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGTCAGCAAGGTCTGTTaGCCTGCACTTGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGVSKVC*PALGAA
Trigger: AGCCGCCCCAAGTGCAGGCAAACAGACCTTGCTGAC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGGCAGGATGGTGGCCTaGGTCTCCAGGTGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRGRMVA*VSRWAV
Trigger: CACGGCCCACCTGGAGACCAAGGCCACCATCCTGCC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCCCCTCCGCTTCCGCCTaGATGTTCAGCAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTPSASA*MFSRLP
Trigger: GGGCAGCCTGCTGAACATCAAGGCGGAAGCGGAGGG...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 90 bp CTCATCGAGGGACTCACTTCTCCTGGAACTGGAGGAATCCGGGTTTaGCCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGCG +
Preference number: 5 (lower is better)
Translates to: LIEGLTSPGTGGIRV*PGAWRSLEKSLPRA
Trigger: CGCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCCTCGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS GCA 90 bp AGCTCCGGTCCATGGTGGATGACTCAGAGGACATGGCGCCTGGGCTaGAGCCAGTGTAGTCCATGCACTCATCTGTCTCAGCATCCATCA +
Preference number: 5 (lower is better)
Translates to: SSGPWWMTQRTWRLG*SQCSPCTHLSQHPS
Trigger: TGATGGATGCTGAGACAGATGAGTGCATGGACTACACTGGCTGCAGCCCAGGCGCCATGTCCTCTGAGTCATCCACCATGGACCGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CCA 90 bp TCCTCCACCACGCAGTGGAAGTGGGCCTTGTGGAGGAAGTCACACTaGCCGTCACAGAAGTCCTTTGTACCAAACCTGCGCAGGTACACC +
Preference number: 5 (lower is better)
Translates to: SSTTQWKWALWRKSH*PSQKSFVPNLRRYT
Trigger: GGTGTACCTGCGCAGGTTTGGTACAAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 90 bp AAGAGCGCGCCGCATTCCTCCACCACGCAGTGGAAGTGGGCCTTGTaGAGGAAGTCACACTGGCCGTCACAGAAGTCCTTTGTACCAAAC +
Preference number: 5 (lower is better)
Translates to: KSAPHSSTTQWKWAL*RKSHWPSQKSFVPN
Trigger: GTTTGGTACAAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGGCGCGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 90 bp TGGTGCTTGAGGAGGAAGGAGAACTGGCAGCCCTCCCGGATGCAGTaGAAGTGGCTGTTCACCTGGTTGTACTTGCAACCTAGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: WCLRRKENWQPSRMQ*KWLFTWLYLQPSLP
Trigger: TGGCAGGCTAGGTTGCAAGTACAACCAGGTGAACAGCCACTTCCACTGCATCCGGGAGGGCTGCCAGTTCTCCTTCCTCCTCAAGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGCACTTGGGGCGGCTTaGGGTGACTTTCCAAGTCCG +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARALGAA*GDFPSP
Trigger: CGGACTTGGAAAGTCACCCAAAGCCGCCCCAAGTGC...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGCTGCCCTCCCCGGGTTaGAAGAGGTGCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARLPSPG*KRCRYL
Trigger: CAAGTACCTGCACCTCTTCAAACCCGGGGAGGGCAG...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp ACAAAACTCCTTCCACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGGTGATGGAGTCTGTTTaGGAGAAGGTTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: TKLLPQTPGACGGSLSGQVMESV*EKVDFR
Trigger: CCTGAAGTCAACCTTCTCCAAAACAGACTCCATCAC...CTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTGGAAGGAGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCGTGGGCAGTCCGTTCTaGACAGTGGAGACGGTCCCC +
Preference number: 5 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTVGSPF*TVETVP
Trigger: GGGGACCGTCTCCACTGTCAAGAACGGACTGCCCAC...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp TCAGCCATGGGTGTGAGCCACAGAGGAGGCCAATACGGAGGCTCGGAGGGAGACAGCTGGGTATTCTTCTaGTGGAAGTTCTCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: SAMGVSHRGGQYGGSEGDSWVFF*WKFSWV
Trigger: GACCCACGAGAACTTCCACAAGAAGAATACCCAGCT...GTCTCCCTCCGAGCCTCCGTATTGGCCTCCTCTGTGGCTCACACCCATGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCCCGAGATCTTGCTGTaGGGAGGTTTGGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVPEILL*GGLVAL
Trigger: CAGTGCCACCAAACCTCCCAACAGCAAGATCTCGGG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCGGACTGCGTGGCCATTaGATTCGTTGCTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVGLRGH*IRCWAP
Trigger: AGGAGCCCAGCAACGAATCAAATGGCCACGCAGTCC...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGATCGTCCAGCACCAGGTaGTCCACGCGGTCGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRSSSTR*STRSWC
Trigger: GCACCACGACCGCGTGGACAACCTGGTGCTGGACGA...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCAGCTGAGTGAGGCCTaGAAGCGCTTGAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGQLSEA*KRLKSS
Trigger: GGACGACTTCAAGCGCTTCAAGGCCTCACTCAGCTG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTTCTCGTGCTTGCGCTaGTGCGAGTCCATCTGCGAC +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGFSCLR*CESICD
Trigger: GTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGTCCTGCTTCTCGTGCTaGCGCTTGTGCGAGTCCATC +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGSCFSC*RLCESI
Trigger: GATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGA...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 90 bp TCCCGTTCTGGGGCCGCAGATTCTCGCCGGTCTTCAGTTTTTGGATaGAGAAGTCGTACTTGGAGGCCCGGGCTACCAGGTTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SRSGAADSRRSSVFG*RSRTWRPGLPGSAS
Trigger: AGATGCAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGAGAATCTGCGGCCCCAGAACGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS TCA 90 bp AGTGGAGACGGTCCCCGTGGTGATGGAGTCTGTTTTGGAGAAGGTTaGCTTCAGGTACTCGGGAGTGTTGAAGGACAGGGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SGDGPRGDGVCFGEG*LQVLGSVEGQGGRR
Trigger: CCTCCTGCCTCCCTGTCCTTCAACACTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACAGACTCCATCACCACGGGGACCGTCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 90 bp GCAAACTGGTCTCGCACGTTCACCAGGTTGTTGTTGGGGTTGATGTaGTCCAGGCAGTGGGATTCGGCCTTGCCAGACGTTTTGCAGACG +
Preference number: 5 (lower is better)
Translates to: ANWSRTFTRLLLGLM*SRQWDSALPDVLQT
Trigger: CGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCTGGTGAACGTGCGAGACCAGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp TTATTGAGAACAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGAGGGCCACTGCGCTCTaGGTCCCGGGGCTGCGATGG +
Preference number: 5 (lower is better)
Translates to: LLRTGSRTHDNTKSPFSLRATAL*VPGLRW
Trigger: CCATCGCAGCCCCGGGACCAAGAGCGCAGTGGCCCT...CAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTGTTCTCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGATGAAGAAGTCGTACTaGGAGGCCCGGGCTACCAGG +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARMKKSY*EARATR
Trigger: CCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCAT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGGTGCTCGTGTACACCTaGTTACAGCCCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGVLVYT*LQPTCM
Trigger: CATGCAGGTGGGCTGTAACAAGGTGTACACGAGCAC...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AGCACCTACTCCCGAGACGCGAGGGGAACGCGGGACTCCCGGCTCATCGAGGGATTCTCGATGTCACACTaGTTCTTGAAAGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: STYSRDARGTRDSRLIEGFSMSH*FLKVNV
Trigger: CACATTCACTTTCAAGAACAAGTGTGACATCGAGAA...TCCCTCGATGAGCCGGGAGTCCCGCGTTCCCCTCGCGTCTCGGGAGTAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CACAGACGCCCGGGGCCTGTGGCGGGTCACTGTCTGGGCAGATGCTCACAGCAGTTCTCGATGTCACACTaGTTCTTGAAAGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: HRRPGPVAGHCLGRCSQQFSMSH*FLKVNV
Trigger: CACATTCACTTTCAAGAACAAGTGTGACATCGAGAA...CTGCTGTGAGCATCTGCCCAGACAGTGACCCGCCACAGGCCCCGGGCGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGTCAACAAGGTCGTCGTaGCTGGACTCCTCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARSTRSS*LDSSCS
Trigger: GGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGA...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGCCTCTGTGTTTCCTTTaGCTGCTCCTCCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGPLCFL*LLLPLS
Trigger: GGACAGAGGGAGGAGCAGCAAAAGGAAACACAGAGG...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACTCGCAGTGCTGGTaGGGACAGAGACACTGCAGA +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGNSQCW*GQRHCR
Trigger: TCTGCAGTGTCTCTGTCCCAACCAGCACTGCGAGTT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCCGGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGATGTGCCAGGGGAGCTaGGTGGTGATGTTGGTCACA +
Preference number: 5 (lower is better)
Translates to: ARASMASSSPGRGMFCKGMCQGS*VVMLVT
Trigger: TGTGACCAACATCACCACCAAGCTCCCCTGGCACAT...CCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 90 bp GCATGGAGGCTCGCAGCTCTGAAGATTCTAGAATTCTCAACTCCATaGGACAGGGGTGAGGCCATGGTTAAGAGGAGGACGGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: AWRLAALKILEFSTP*DRGEAMVKRRTGVA
Trigger: GGCCACTCCCGTCCTCCTCTTAACCATGGCCTCACCCCTGTCTCATGGAGTTGAGAATTCTAGAATCTTCAGAGCTGCGAGCCTCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472814.1
CDS GCA 90 bp GTGAAGTATTTGAAGCCATTGGCTGCCCGCCGCTCCGCCTTCTCATaGTTCTTGATGTGCCAGGGGAGCTTGGTGGTGATGTTGGTCACA +
Preference number: 5 (lower is better)
Translates to: VKYLKPLAARRSAFS*FLMCQGSLVVMLVT
Trigger: TGTGACCAACATCACCACCAAGCTCCCCTGGCACATCAAGAAGCATGAGAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAAATACTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CCA 90 bp CGCACGTTCACCAGGTTGTTGTTGGGGTTGATGTGGTCCAGGCAGTaGGATTCGGCCTTGCCAGACGTTTTGCAGACGTACTTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RTFTRLLLGLMWSRQ*DSALPDVLQTYLQF
Trigger: GAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCTGGTGAACGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACGTGCTGCTGGGGAGTaGCAGGAGCCCCTTGTAAAG +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRRAAGE*QEPLVK
Trigger: CTTTACAAGGGGCTCCTGCAACTCCCCAGCAGCACG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAGCTGCTCGCCAGCCTaGAGCTTGCGGATGTACTCC +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRSCSPA*SLRMYS
Trigger: GGAGTACATCCGCAAGCTCAAGGCTGGCGAGCAGCT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCAGTGCTCGTGTACACCTaGTTACAGCCCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: AAHMTIQSHRSPCKEPPPVLVYT*LQPTCM
Trigger: CATGCAGGTGGGCTGTAACAAGGTGTACACGAGCAC...TGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCAAGTGGTTGGTAGCCTaGCTGTACACGCAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTKWLVA*LYTQPS
Trigger: CGAGGGCTGCGTGTACAGCAAGGCTACCAACCACTT...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp TACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCAGTGAGGAGGGTCCGTCACAGAAGTCCTTaGTACCAAACCTGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: YKVTVLPARSHHHPVRRVRHRSP*YQTCAG
Trigger: ACCTGCGCAGGTTTGGTACAAAGGACTTCTGTGACG...GACCCTCCTCACTGGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAGGTTGTTGTTGGGGTaGATGTGGTCCAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARRLLLG*MWSRQW
Trigger: CCACTGCCTGGACCACATCAACCCCAACAACAACCT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAAGTATTTGAAGCCATaGGCTGCCCGCCGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRKYLKP*AARRSA
Trigger: GGCGGAGCGGCGGGCAGCCAATGGCTTCAAATACTT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 90 bp AGTATGCAAACTGGTCTCGCACGTTCACCAGGTTGTTGTTGGGGTTaGTGTGGTCCAGGCAGTGGGATTCGGCCTTGCCAGACGTTTTGC +
Preference number: 5 (lower is better)
Translates to: SMQTGLARSPGCCWG*CGPGSGIRPCQTFC
Trigger: GCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCTGGTGAACGTGCGAGACCAGTTTGCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp TGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTTGGCGTACTTaGAGTCCGTGGCGAGGCAAGGATCGTTCTCCTGGAACTGGAGGA +
Preference number: 5 (lower is better)
Translates to: CSSQRDSGSGTCWRT*SPWRGKDRSPGTGG
Trigger: TCCTCCAGTTCCAGGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp TTTGAAGAGGTGCAGGTACTTGACATTCTCCAGGTCGTACTTGGATaGCTTCTTGTAGGTGCTCCCGTTCTGGGGCCGCAGATTCTCGCC +
Preference number: 5 (lower is better)
Translates to: FEEVQVLDILQVVLG*LLVGAPVLGPQILA
Trigger: GGCGAGAATCTGCGGCCCCAGAACGGGAGCACCTACAAGAAGCCATCCAAGTACGACCTGGAGAATGTCAAGTACCTGCACCTCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 90 bp CGGAAGCGCTGGAAGCCGTCGTTAATGAGCTGGGTATTCTTCTTGTaGAAGTTCTCGTGGGTCATCACGTCAGACGTGCTCGTGTACACC +
Preference number: 5 (lower is better)
Translates to: RKRWKPSLMSWVFFL*KFSWVITSDVLVYT
Trigger: GGTGTACACGAGCACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAACGACGGCTTCCAGCGCTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp CAGTCTTCGGTGGCTCGGAAGCGCTGGAAGCCGTCGTTAATGAGCTaGGTATTCTTCTTGTGGAAGTTCTCGTGGGTCATCACGTCAGAC +
Preference number: 5 (lower is better)
Translates to: QSSVARKRWKPSLMS*VFFLWKFSWVITSD
Trigger: GTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAACGACGGCTTCCAGCGCTTCCGAGCCACCGAAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS-3UTR CAA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAGTGTCACTTCATCCTTaGCATCCCAAGAGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPVSLHP*HPKRPG
Trigger: CCCTGGCCTCTTGGGATGCAAAGGATGAAGTGACAC...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACCCGAGATCTTGCTGTaGGGAGGTTTGGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRPEILL*GGLVAL
Trigger: CAGTGCCACCAAACCTCCCAACAGCAAGATCTCGGG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAGGACTGCGTGGCCATTaGATTCGTTGCTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRGLRGH*IRCWAP
Trigger: AGGAGCCCAGCAACGAATCAAATGGCCACGCAGTCC...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAGGAGCAGCAGCATCTTaGGCTAGAAGGACATCACCC +
Preference number: 5 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPGAAAS*ARRTSP
Trigger: GGGTGATGTCCTTCTAGCCAAAGATGCTGCTGCTCC...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS GCA 90 bp CCAGGCAGTGGGATTCGGCCTTGCCAGACGTTTTGCAGACGTACTTaGAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTTGGCGTACT +
Preference number: 5 (lower is better)
Translates to: PGSGIRPCQTFCRRT*SSQRDSGSGTCWRT
Trigger: AGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 90 bp AGACGTACTTGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTTaGCGTACTTGCAGTCCGTGGCGAGGCAAGGATCGTTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: RRTCSSQRDSGSGTC*RTCSPWRGKDRSPG
Trigger: TCCAGGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTTCGCCAGCCTTGAGCTaGCGGATGTACTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFSPALS*RMYSSY
Trigger: GTATGAGGAGTACATCCGCAAGCTCAAGGCTGGCGA...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCGCACGTTCACCAGGTaGTTGTTGGGGTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFRTFTR*LLGLMW
Trigger: CCACATCAACCCCAACAACAACCTGGTGAACGTGCG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp TGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGGTTTCGCTTGGTGAAGTATTaGAAGCCATTGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: CRGDQIQVIRAHAVQLGFRLVKY*KPLAAR
Trigger: GCGGGCAGCCAATGGCTTCAAATACTTCACCAAGCG...AAACCCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGGTGCCGAGGAGACCAGATTCAAGTAATCAGAGCACACGCTGTTCAGCTCGGAGGAAGGGGGATGTTTaGCAAAGGGAACCCAATCTG +
Preference number: 5 (lower is better)
Translates to: QVPRRPDSSNQSTRCSARRKGDV*QREPNL
Trigger: CAGATTGGGTTCCCTTTGCAAAACATCCCCCTTCCT...CCGAGCTGAACAGCGTGTGCTCTGATTACTTGAATCTGGTCTCCTCGGCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCCACCTTGCCTGTCTaGAAGGCGATGGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPTLPV*KAMAPP
Trigger: GGGCGGGGCCATCGCCTTCAAGACAGGCAAGGTGGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCACCCCGGACGTCGTACTaGGAAGGGCGCCCCACCTTG +
Preference number: 5 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSPRTSY*EGRPTL
Trigger: CAAGGTGGGGCGCCCTTCCAAGTACGACGTCCGGGG...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAATGCAGTGGAAGTGGTaGGTAGCCTTGCTGTACACG +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRMQWKW*VALLYT
Trigger: CGTGTACAGCAAGGCTACCAACCACTTCCACTGCAT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGATGGCCATTTGATTCGTaGCTGGGCTCCTTCACAGTC +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRWPFDS*LGSFTV
Trigger: GACTGTGAAGGAGCCCAGCAACGAATCAAATGGCCA...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGACCACACTCCTCGCGCTaGGTGAAGTATTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRPHSSR*VKYLKP
Trigger: TGGCTTCAAATACTTCACCAAGCGCGAGGAGTGTGG...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 90 bp GGGTATTCTTCTTGTGGAAGTTCTCGTGGGTCATCACGTCAGACGTaGTCGTGTACACCTTGTTACAGCCCACCTGCATGCAGTGATAGT +
Preference number: 5 (lower is better)
Translates to: GYSSCGSSRGSSRQT*SCTPCYSPPACSDS
Trigger: ACTATCACTGCATGCAGGTGGGCTGTAACAAGGTGTACACGAGCACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 90 bp AAGCCGTCGTTAATGAGCTGGGTATTCTTCTTGTGGAAGTTCTCGTaGGTCATCACGTCAGACGTGCTCGTGTACACCTTGTTACAGCCC +
Preference number: 5 (lower is better)
Translates to: KPSLMSWVFFLWKFS*VITSDVLVYTLLQP
Trigger: GGGCTGTAACAAGGTGTACACGAGCACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAACGACGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAAGCTGGGTATTCTTCTaGTGGAAGTTCTCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRSWVFF*WKFSWV
Trigger: GACCCACGAGAACTTCCACAAGAAGAATACCCAGCT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAGGAAGCCGCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCAGCCGGTCTTCAGTTTTaGGATGAAGAAGTCGTACTT +
Preference number: 5 (lower is better)
Translates to: QEAAHMTIQSHRSPCKEPAGLQF*DEEVVL
Trigger: AAGTACGACTTCTTCATCCAAAAACTGAAGACCGGC...TGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGCGGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS-3UTR CAA 90 bp GCACACATGACAATACAAAGTCACCGTTCTCCCTGCAAGGAGCCACCACCATCCATGTCACACTTGTTCTaGAAAGTGAATGTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: AHMTIQSHRSPCKEPPPSMSHLF*KVNVQP
Trigger: CGGCTGCACATTCACTTTCAAGAACAAGTGTGACAT...GGATGGTGGTGGCTCCTTGCAGGGAGAACGGTGACTTTGTATTGTCATGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS TCA 90 bp CCCAGCACAGCTTTAATTTCTCTGGGTGGGGGAACGGGAGGCGTGTaGTGGATGGCTCTTACCTTATTCATAAGCGAGGATAAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: PSTALISLGGGTGGV*WMALTLFISEDKRD
Trigger: ATCTCTTTTATCCTCGCTTATGAATAAGGTAAGAGCCATCCATCACACGCCTCCCGTTCCCCCACCCAGAGAAATTAAAGCTGTGCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490176.1
CDS-3UTR CAA 90 bp AAGGGGGATGTTTTGCAAAGGGAACCCAATCTGGGTAGACTGCACCAGCGAAGAATGTCACACTTGTTCTaGAAAGTGAATGTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: KGDVLQREPNLGRLHQRRMSHLF*KVNVQP
Trigger: CGGCTGCACATTCACTTTCAAGAACAAGTGTGACAT...TCTTCGCTGGTGCAGTCTACCCAGATTGGGTTCCCTTTGCAAAACATCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp GGGCTTCGATGGCATCATCATCTCCAGGAAGGGGGATGTTTTGCAAAGGGAACCTTGGTGGATCAAGCATaGTTTCCCCACAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GLRWHHHLQEGGCFAKGTLVDQA*FPHRKK
Trigger: TTTCTTTCTGTGGGGAAACAATGCTTGATCCACCAA...GGTTCCCTTTGCAAAACATCCCCCTTCCTGGAGATGATGATGCCATCGAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAAACTTGTTGGCGTACTaGCAGTCCGTGGCGAGGCAA +
Preference number: 5 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSNLLAY*QSVARQ
Trigger: TTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATTCACCAGGTTGTTGTaGGGGTTGATGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSFTRLL*GLMWSR
Trigger: CCTGGACCACATCAACCCCAACAACAACCTGGTGAA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCATGGAAGTGCGAGCACTaGAGCTTGTACTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSWKCEH*SLYLQS
Trigger: CGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCCA...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS-3UTR CAA 90 bp CAAGTGGAAAAATATTCAGTTCTTAATAACCAGGTGCCGAGGAGACCAGATTCAATAAAAGAGATGAATTaGCCGGGACTGCGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: QVEKYSVLNNQVPRRPDSIKEMN*PGLRGH
Trigger: ATGGCCACGCAGTCCCGGCAAATTCATCTCTTTTAT...TGAATCTGGTCTCCTCGGCACCTGGTTATTAAGAACTGAATATTTTTCCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp CGGCCGGAGCGTGGCCGGCGAGAAGGATGGAGTCGCTaGCGGCTGCGGGGCCGTGCGGGCAGCCTCATCACC +
Preference number: 6 (lower is better)
Translates to: RPERGRREGWSR*RLRGRAGSLIT
Trigger: GGTGATGAGGCTGCCCGCACGGCCCCGCAGCCGCCAGCGACTCCATCCTTCTCGCCGGCCACGCTCCGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS TCA 72 bp GGCGCGGGCCGGGCCTGCCCTACACCGGGCCGCCTCTaGTCACGTTTTCAGGGCCACTGCCCGCCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: GAGRACPTPGRL*SRFQGHCPPAQ
Trigger: CTGCGCTGGCGGGCAGTGGCCCTGAAAACGTGATCAGAGGCGGCCCGGTGTAGGGCAGGCCCGGCCCGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472814.1
CDS GCA 72 bp GGTCCTGGGAGGCTTCGTGGGGGCCTGGGGCGCCGGTaGTCTCACCGGGTTCCGGCTTCACTTGGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GPGRLRGGLGRR*SHRVPASLGPG
Trigger: CCCCGGCCCAAGTGAAGCCGGAACCCGGTGAGAGCACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000490176.1
CDS GCA 72 bp CCGCCGCCGCCTCGGGCAGCGACTCCTCCGAGTCGGTaGGCAGGTCCTCGTCGTCGTCGTCCTCGTCGTCGT +
Preference number: 6 (lower is better)
Translates to: PPPPRAATPPSR*AGPRRRRPRRR
Trigger: ACGACGACGAGGACGACGACGACGAGGACCTGCGCACCGACTCGGAGGAGTCGCTGCCCGAGGCGGCGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp CTCAGGGCCACTGCGCTCTTGGTCCCGGGGCTGCGATaGGCTGCCCTCCGTGTGGGAGCCGGCGTCAGCTCG +
Preference number: 6 (lower is better)
Translates to: LRATALLVPGLR*AALRVGAGVSS
Trigger: CGAGCTGACGCCGGCTCCCACACGGAGGGCAGCCCATCGCAGCCCCGGGACCAAGAGCGCAGTGGCCCTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS CCA 72 bp GGTCGTCGTTGCTGGACTCCTCGTGCTCCGTGTCCTTaGCGCCCAGCAGCGAGGGCGGCAGCCCCAGCGCGC +
Preference number: 6 (lower is better)
Translates to: GRRCWTPRAPCP*RPAARAAAPAR
Trigger: GCGCGCTGGGGCTGCCGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 90 bp CCGGGCAGGGTGCCCACCACCTCCTTGCCCACCCGCTCCTCGGTCTaGGTGCTGGGGGCCGGCCAGGAGAGCTGCTCGCCAGCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: PGRVPTTSLPTRSSV*VLGAGQESCSPALS
Trigger: GCTCAAGGCTGGCGAGCAGCTCTCCTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGGTGGGCAAGGAGGTGGTGGGCACCCTGCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 72 bp GGCCACTGCGCTCTTGGTCCCGGGGCTGCGATGGGCTaGCCTCCGTGTGGGAGCCGGCGTCAGCTCGCTTCT +
Preference number: 6 (lower is better)
Translates to: GHCALGPGAAMG*PPCGSRRQLAS
Trigger: AGAAGCGAGCTGACGCCGGCTCCCACACGGAGGGCAGCCCATCGCAGCCCCGGGACCAAGAGCGCAGTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS GCA 72 bp CCACCACCTCCTTGCCCACCCGCTCCTCGGTCTTGGTaGTGGGGGCCGGCCAGGAGAGCTGCTCGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: PPPPCPPAPRSW*WGPARRAARQP
Trigger: AGGCTGGCGAGCAGCTCTCCTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGGTGGGCAAGGAGGTGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 72 bp GAGGAGGAGGAGGAGGAGCCGGGCAGCCTGCCGCGGTaGTCTCGTTACCCACGGGGGTGCTGGAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: EEEEEEPGSLPR*SRYPRGCWSSS
Trigger: GGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGCTGCCCGGCTCCTCCTCCTCCTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS CCA 72 bp GCAGCGAGGAGGCCTCTCCTGAAGCCTGCCTGGTGCTaGGGCCGCTGTCCTCCTTGGAGGCTGCCCCGTCCG +
Preference number: 6 (lower is better)
Translates to: AARRPLLKPAWC*GRCPPWRLPRP
Trigger: CGGACGGGGCAGCCTCCAAGGAGGACAGCGGCCCCAGCACCAGGCAGGCTTCAGGAGAGGCCTCCTCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp CCGCTCTCTCGCCTTGGCCTGAAGCCTGCCTGGTGCTaGGGCCGCTGTCCTCCTTGGAGGCTGCCCCGTCCG +
Preference number: 6 (lower is better)
Translates to: PLSRLGLKPAWC*GRCPPWRLPRP
Trigger: CGGACGGGGCAGCCTCCAAGGAGGACAGCGGCCCCAGCACCAGGCAGGCTTCAGGCCAAGGCGAGAGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478728.2
CDS CAA 72 bp GTGCCCACCACCTCCTTGCCCACCCGCTCCTCGGTCTaGGTGCTGGGGGCCGGCCAGGAGAGCTGCTCGCCA +
Preference number: 6 (lower is better)
Translates to: VPTTSLPTRSSV*VLGAGQESCSP
Trigger: TGGCGAGCAGCTCTCCTGGCCGGCCCCCAGCACCAAGACCGAGGAGCGGGTGGGCAAGGAGGTGGTGGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 72 bp GGAGGGACCGGAGGGGACGAGGGGGCCATGGGAGGTTaGGTCTCGGCGGCCGAGGCCGGAAAGGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: GGTGGDEGAMGG*VSAAEAGKAAS
Trigger: AGAGGCTGCCTTTCCGGCCTCGGCCGCCGAGACCAAACCTCCCATGGCCCCCTCGTCCCCTCCGGTCCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CAA 90 bp GCGGGGCCCTCTGCCGCGGGCTCGCCGCGCTCCTGCTTCTCGTGCTaGCGCTTGTGCGAGTCCATCTGCGACATGCCCACCACCGTGTGG +
Preference number: 6 (lower is better)
Translates to: AGPSAAGSPRSCFSC*RLCESICDMPTTVW
Trigger: CCACACGGTGGTGGGCATGTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGAGCGCGGCGAGCCCGCGGCAGAGGGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp GGGTGGGCGGAACCTTGGCGGGGCCTGGCTTCTGGATaGCCCGGACGTCGTACTTGGAAGGGCGCCCCACCT +
Preference number: 6 (lower is better)
Translates to: GWAEPWRGLASG*PGRRTWKGAPP
Trigger: AGGTGGGGCGCCCTTCCAAGTACGACGTCCGGGGCATCCAGAAGCCAGGCCCCGCCAAGGTTCCGCCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 72 bp GTGGCGGCAGTGGCGGCAGCCAGGGACGCAGAGGACTaGTGGCTGGTAGGGGAGGCGCTCAGGCTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: VAAVAAARDAED*WLVGEALRLEF
Trigger: GAACTCCAGCCTGAGCGCCTCCCCTACCAGCCAGCAGTCCTCTGCGTCCCTGGCTGCCGCCACTGCCGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 72 bp GGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCTCTCCTaGAGAGGAGGATGGGGGCGCATCACCTCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: GGRVVPQRGGLS*RGGWGRITSGR
Trigger: CCTCCCAGAGGTGATGCGCCCCCATCCTCCTCTGCAGGAGAGGCCTCCTCGCTGCGGGACTACGCGGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CCA 72 bp TCCAGGGCACCGCCGTCCTTGGAGGGCTCCTCCGCGTaGTCTTCCTCATCGCTGCACCCCTGGGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: SRAPPSLEGSSA*SSSSLHPWGCT
Trigger: GGTGCAGCCCCAGGGGTGCAGCGATGAGGAAGACCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS CAA 90 bp CCCTCTGCCGCGGGCTCGCCGCGCTCCTGCTTCTCGTGCTTGCGCTaGTGCGAGTCCATCTGCGACATGCCCACCACCGTGTGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: PSAAGSPRSCFSCLR*CESICDMPTTVWRQ
Trigger: CTGCCGCCACACGGTGGTGGGCATGTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGAGCGCGGCGAGCCCGCGGCAGAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp GAGGCTGCCCCGTCCGAATCCTTCTCCTCCAGGGCACCGCCGTCCTaGGAGGGCTCCTCCGCGTGGTCTTCCTCATCGCTGCACCCCTGG +
Preference number: 6 (lower is better)
Translates to: EAAPSESFSSRAPPS*EGSSAWSSSSLHPW
Trigger: CCAGGGGTGCAGCGATGAGGAAGACCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCCTGGAGGAGAAGGATTCGGACGGGGCAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS CAA 90 bp AAGTCAACAAGGTCGTCGTTGCTGGACTCCTCGTGCTCCGTGTCCTaGGCGCCCAGCAGCGAGGGCGGCAGCCCCAGCGCGCCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: KSTRSSLLDSSCSVS*APSSEGGSPSAPEE
Trigger: CTCCTCGGGCGCGCTGGGGCTGCCGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 72 bp GCCCTCGCGGGCAATCCGCCCCAACACGGGTGTGGGTaGCGGCTCCTCGCTGTACTCCCCGTTCACCCACTT +
Preference number: 6 (lower is better)
Translates to: ALAGNPPQHGCG*RLLAVLPVHPL
Trigger: AAGTGGGTGAACGGGGAGTACAGCGAGGAGCCGGCACCCACACCCGTGTTGGGGCGGATTGCCCGCGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS GCA 72 bp TGCAGCGGAAGCGGCAGCGCAGGCAGTGGAAGTGCGTaGTGGTGCCCGAGAAGGGGCAGTCGGCGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: CSGSGSAGSGSA*WCPRRGSRRSG
Trigger: GCCACTTCGCCGACTGCCCCTTCTCGGGCACCAGCACGCACTTCCACTGCCTGCGCTGCCGCTTCCGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp GACTACACAGAGCGGAGGGAGGCTCCCAAACGGGCGTaGAGGGCAGCCCTCGGTGCGGTGGAGGGACCGAAG +
Preference number: 6 (lower is better)
Translates to: DYTERREAPKRA*RAALGAVEGPK
Trigger: CTTCGGTCCCTCCACCGCACCGAGGGCTGCCCTGCACGCCCGTTTGGGAGCCTCCCTCCGCTCTGTGTAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CCA 72 bp GCGGCAGTGGCGGCAGCCAGGGACGCAGAGGACTGCTaGCTGGTAGGGGAGGCGCTCAGGCTGGAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: AAVAAARDAEDC*LVGEALRLEFL
Trigger: CAAGAACTCCAGCCTGAGCGCCTCCCCTACCAGCCAGCAGTCCTCTGCGTCCCTGGCTGCCGCCACTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp GGGGCAGCAGCCCCGAGATCTTGCTGTTGGGAGGTTTaGTGGCACTGGGCCCAGCCTCGGTGGCGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: GAAAPRSCCWEV*WHWAQPRWRQW
Trigger: CCACTGCCGCCACCGAGGCTGGGCCCAGTGCCACCAAACCTCCCAACAGCAAGATCTCGGGGCTGCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp GCAGGCCCTGGGGCAGCAGCCCCGAGATCTTGCTGTTaGGAGGTTTGGTGGCACTGGGCCCAGCCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: AGPGAAAPRSCC*EVWWHWAQPRW
Trigger: CCACCGAGGCTGGGCCCAGTGCCACCAAACCTCCCAACAGCAAGATCTCGGGGCTGCTGCCCCAGGGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp CAGCTCCCGAGGCGACCAGCGTGGGTGTGTCAGGGGTaGCTGAGGCTGCTGACCCAGACGACACGGCACCCA +
Preference number: 6 (lower is better)
Translates to: QLPRRPAWVCQG*LRLLTQTTRHP
Trigger: TGGGTGCCGTGTCGTCTGGGTCAGCAGCCTCAGCCACCCCTGACACACCCACGCTGGTCGCCTCGGGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp ACAGTCAGGTCTAGACTGCGGTCCTGGGAGGCTTCGTaGGGGCCTGGGGCGCCGGTGCTCTCACCGGGTTCC +
Preference number: 6 (lower is better)
Translates to: TVRSRLRSWEAS*GPGAPVLSPGS
Trigger: GGAACCCGGTGAGAGCACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGACCGCAGTCTAGACCTGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000490176.1
CDS CCA 72 bp CTGGGCTCCTTCACAGTCAGGTCTAGACTGCGGTCCTaGGAGGCTTCGTGGGGGCCTGGGGCGCCGGTGCTC +
Preference number: 6 (lower is better)
Translates to: LGSFTVRSRLRS*EASWGPGAPVL
Trigger: GAGCACCGGCGCCCCAGGCCCCCACGAAGCCTCCCAGGACCGCAGTCTAGACCTGACTGTGAAGGAGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000490176.1
CDS CCA 72 bp GTGCTGTCGGTGCAGCGGAAGCGGCAGCGCAGGCAGTaGAAGTGCGTGCTGGTGCCCGAGAAGGGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: VLSVQRKRQRRQ*KCVLVPEKGQS
Trigger: CGACTGCCCCTTCTCGGGCACCAGCACGCACTTCCACTGCCTGCGCTGCCGCTTCCGCTGCACCGACAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp CCTGGCCTCCTCCAGTCACTTGCAGTCACACAAGGTTaGGCCACCCGGGGAGGGCAGGAGTCCGGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGLLQSLAVTQG*ATRGGQESGQG
Trigger: GCCCTGCCCGGACTCCTGCCCTCCCCGGGTGGCCCAACCTTGTGTGACTGCAAGTGACTGGAGGAGGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CAA 90 bp ATTGAGCCAGGCAGGCCCTGGGGCAGCAGCCCCGAGATCTTGCTGTaGGGAGGTTTGGTGGCACTGGGCCCAGCCTCGGTGGCGGCAGTG +
Preference number: 6 (lower is better)
Translates to: IEPGRPWGSSPEILL*GGLVALGPASVAAV
Trigger: CACTGCCGCCACCGAGGCTGGGCCCAGTGCCACCAAACCTCCCAACAGCAAGATCTCGGGGCTGCTGCCCCAGGGCCTGCCTGGCTCAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 72 bp CTGCCGCGGGCTCGCCGCGCTCCTGCTTCTCGTGCTTaGGCTTGTGCGAGTCCATCTGCGACATGCCCACCA +
Preference number: 6 (lower is better)
Translates to: LPRARRAPASRA*ACASPSATCPP
Trigger: TGGTGGGCATGTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGAGCGCGGCGAGCCCGCGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp GGCAGCCTGCCGCGGTGCTCTCGTTACCCACGGGGGTaGTGGAGCAGCTCCGGTCCATGGTGGATGACTCAG +
Preference number: 6 (lower is better)
Translates to: GSLPRCSRYPRG*WSSSGPWWMTQ
Trigger: CTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS CCA 72 bp GCATCTGGACACTGCTGTGCGACGGCAGGGGCAGGATaGTGGCCTTGGTCTCCAGGTGGGCCGTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ASGHCCATAGAG*WPWSPGGPCCW
Trigger: CCAGCAGCACGGCCCACCTGGAGACCAAGGCCACCATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 72 bp CAGTCGGGCACGGCGCAGTCGGCGCTGGAGCTGAACTaGCAGAAGCCCGCGGCGCTGATCACGTCCTGTTTG +
Preference number: 6 (lower is better)
Translates to: QSGTAQSALELN*QKPAALITSCL
Trigger: CAAACAGGACGTGATCAGCGCCGCGGGCTTCTGCCAGTTCAGCTCCAGCGCCGACTGCGCCGTGCCCGACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp TCTGCCGCGGGCTCGCCGCGCTCCTGCTTCTCGTGCTaGCGCTTGTGCGAGTCCATCTGCGACATGCCCACC +
Preference number: 6 (lower is better)
Translates to: SAAGSPRSCFSC*RLCESICDMPT
Trigger: GGTGGGCATGTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGAGCGCGGCGAGCCCGCGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp CCTTGGAGGGCTCCTCCGCGTGGTCTTCCTCATCGCTaGACCCCTGGGGCTGCACCATGTAGACACCCTCGG +
Preference number: 6 (lower is better)
Translates to: PWRAPPRGLPHR*TPGAAPCRHPR
Trigger: CCGAGGGTGTCTACATGGTGCAGCCCCAGGGGTGCAGCGATGAGGAAGACCACGCGGAGGAGCCCTCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS GCA 72 bp CGCGGTCGTGGTGCTGCGCGTGCTTGTACATGTGCGTaGGCCCGCAGAACTTGTAGCCGCAGTTCTCGCGCG +
Preference number: 6 (lower is better)
Translates to: RGRGAARACTCA*ARRTCSRSSRA
Trigger: CGCGCGAGAACTGCGGCTACAAGTTCTGCGGGCGCACGCACATGTACAAGCACGCGCAGCACCACGACCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp TCCTGCTTCTCGTGCTTGCGCTTGTGCGAGTCCATCTaGGACATGCCCACCACCGTGTGGCGGCAGCCCGGG +
Preference number: 6 (lower is better)
Translates to: SCFSCLRLCESI*DMPTTVWRQPG
Trigger: CCCGGGCTGCCGCCACACGGTGGTGGGCATGTCGCAGATGGACTCGCACAAGCGCAAGCACGAGAAGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp CTGAGGCCAGGTGGCCACCCCAGTCCAGAAGGTGCCTaGTTTCTGGGCAGGACCCAGCCTGCTCACCTGGGT +
Preference number: 6 (lower is better)
Translates to: LRPGGHPSPEGA*FLGRTQPAHLG
Trigger: ACCCAGGTGAGCAGGCTGGGTCCTGCCCAGAAAGCAGGCACCTTCTGGACTGGGGTGGCCACCTGGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS CCA 72 bp CGTCCGAATCCTTCTCCTCCAGGGCACCGCCGTCCTTaGAGGGCTCCTCCGCGTGGTCTTCCTCATCGCTGC +
Preference number: 6 (lower is better)
Translates to: RPNPSPPGHRRP*RAPPRGLPHRC
Trigger: GCAGCGATGAGGAAGACCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCCTGGAGGAGAAGGATTCGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS CCA 72 bp TACCCACGGGGGTGCTGGAGCAGCTCCGGTCCATGGTaGATGACTCAGAGGACATGGCGCCTGGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: YPRGCWSSSGPW*MTQRTWRLGCS
Trigger: GCTGCAGCCCAGGCGCCATGTCCTCTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CCA 72 bp TCCCTGCCGCGGTGCTCTCGTTACCCACGGGGGTGCTaGAGCAGCTCCGGTCCATGGTGGATGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: SLPRCSRYPRGC*SSSGPWWMTQR
Trigger: CCTCTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp AGCCTGCCGCGGTGCTCTCGTTACCCACGGGGGTGCTaGAGCAGCTCCGGTCCATGGTGGATGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: SLPRCSRYPRGC*SSSGPWWMTQR
Trigger: CCTCTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS CAA 72 bp CCGTCCGAATCCTTCTCCTCCAGGGCACCGCCGTCCTaGGAGGGCTCCTCCGCGTGGTCTTCCTCATCGCTG +
Preference number: 6 (lower is better)
Translates to: PSESFSSRAPPS*EGSSAWSSSSL
Trigger: CAGCGATGAGGAAGACCACGCGGAGGAGCCCTCCAAGGACGGCGGTGCCCTGGAGGAGAAGGATTCGGACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000478728.2
ENST00000496432.6
CDS CAA 72 bp TCCTGTTTGCCGTGGTGCTTGCGATGCGCCGTGACCTaGGTGCTGTCGGTGCAGCGGAAGCGGCAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: SCLPWCLRCAVT*VLSVQRKRQRR
Trigger: CCTGCGCTGCCGCTTCCGCTGCACCGACAGCACCAAGGTCACGGCGCATCGCAAGCACCACGGCAAACAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp AGGGCAGCTGCAGCCAGCCTGGCCATCATGGGCGAGATGAGGCCCTaGCTTGCAGAGATCCTCTCCATGATGGAGGCGGGTGGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: RAAAASLAIMGEMRP*LAEILSMMEAGGAG
Trigger: CCCGGCACCACCCGCCTCCATCATGGAGAGGATCTCTGCAAGCAAGGGCCTCATCTCGCCCATGATGGCCAGGCTGGCTGCAGCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 90 bp TGGCGGCAGCCCGGGAAGGTGCAGTGGAAGTGCGAGCACTTGAGCTaGTACTTGCAGTCGGGCACGGCGCAGTCGGCGCTGGAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: WRQPGKVQWKCEHLS*YLQSGTAQSALELN
Trigger: GTTCAGCTCCAGCGCCGACTGCGCCGTGCCCGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCCACTGCACCTTCCCGGGCTGCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp CCTCCGGGGTGGAGCCCGCGTGCAGCTTCTCAAAGCTaGTCTTCCTGGCCAGCTCGTCCCGCGTGTTCTGGT +
Preference number: 6 (lower is better)
Translates to: PPGWSPRAASQS*SSWPARPACSG
Trigger: ACCAGAACACGCGGGACGAGCTGGCCAGGAAGATCAGCTTTGAGAAGCTGCACGCGGGCTCCACCCCGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS TCA 72 bp TCACGTCCTGTTTGCCGTGGTGCTTGCGATGCGCCGTaGCCTTGGTGCTGTCGGTGCAGCGGAAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: SRPVCRGACDAP*PWCCRCSGSGS
Trigger: GCTGCCGCTTCCGCTGCACCGACAGCACCAAGGTCACGGCGCATCGCAAGCACCACGGCAAACAGGACGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp GGCAGCCCGGGAAGGTGCAGTGGAAGTGCGAGCACTTaGGCTTGTACTTGCAGTCGGGCACGGCGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: GSPGRCSGSAST*ACTCSRARRSR
Trigger: CCGACTGCGCCGTGCCCGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCCACTGCACCTTCCCGGGCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp GAGAAGTCAACAAGGTCGTCGTTGCTGGACTCCTCGTaGTCCGTGTCCTTGGCGCCCAGCAGCGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: EKSTRSSLLDSS*SVSLAPSSEGG
Trigger: GCCGCCCTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGACTTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 72 bp TGTTCCCTGCCGCGGTGCTCTCGTTACCCACGGGGGTaGTGGAGCAGCTCCGGTCCATGGTGGATGACTCAG +
Preference number: 6 (lower is better)
Translates to: CSLPRCSRYPRG*WSSSGPWWMTQ
Trigger: CTGAGTCATCCACCATGGACCGGAGCTGCTCCAGCACCCCCGTGGGTAACGAGAGCACCGCGGCAGGGAACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp TCGTCCAGCACCAGGTTGTCCACGCGGTCGTGGTGCTaGGCGTGCTTGTACATGTGCGTGCGCCCGCAGAAC +
Preference number: 6 (lower is better)
Translates to: SSSTRLSTRSWC*ACLYMCVRPQN
Trigger: GTTCTGCGGGCGCACGCACATGTACAAGCACGCGCAGCACCACGACCGCGTGGACAACCTGGTGCTGGACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp AAGTCGTCCAGCACCAGGTTGTCCACGCGGTCGTGGTaGTGCGCGTGCTTGTACATGTGCGTGCGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: KSSSTRLSTRSW*CACLYMCVRPQ
Trigger: CTGCGGGCGCACGCACATGTACAAGCACGCGCAGCACCACGACCGCGTGGACAACCTGGTGCTGGACGACTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp TGGAGGAAACGCTCGGCACGCCAGGGGCCCTGGGCCTaGTCTTATCAGGGTGGACTTGGGATGTGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: WRKRSARQGPWA*SYQGGLGMWEG
Trigger: ACCCTCCCACATCCCAAGTCCACCCTGATAAGAGCAGGCCCAGGGCCCCTGGCGTGCCGAGCGTTTCCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS CCA 72 bp CCCTCGGTGCGGTGGAGGGACCGAAGTGGATGGGGATaGGAGGAGGCAGCTACCTTGGCCCTAGAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: PSVRWRDRSGWG*EEAATLALEVR
Trigger: TCTGACCTCTAGGGCCAAGGTAGCTGCCTCCTCCCATCCCCATCCACTTCGGTCCCTCCACCGCACCGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CAA 72 bp CCCGGGAAGGTGCAGTGGAAGTGCGAGCACTTGAGCTaGTACTTGCAGTCGGGCACGGCGCAGTCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: PGKVQWKCEHLS*YLQSGTAQSAL
Trigger: CAGCGCCGACTGCGCCGTGCCCGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCCACTGCACCTTCCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp CGGCAGCCCGGGAAGGTGCAGTGGAAGTGCGAGCACTaGAGCTTGTACTTGCAGTCGGGCACGGCGCAGTCG +
Preference number: 6 (lower is better)
Translates to: RQPGKVQWKCEH*SLYLQSGTAQS
Trigger: CGACTGCGCCGTGCCCGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCCACTGCACCTTCCCGGGCTGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp TCGGTCTTGGTGCTGGGGGCCGGCCAGGAGAGCTGCTCGCCAGCCTaGAGCTTGCGGATGTACTCCTCATACTTAGAGAACCGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: SVLVLGAGQESCSPA*SLRMYSSYLENRAR
Trigger: GCGGGCGCGGTTCTCTAAGTATGAGGAGTACATCCGCAAGCTCAAGGCTGGCGAGCAGCTCTCCTGGCCGGCCCCCAGCACCAAGACCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 90 bp CTGATCACGTCCTGTTTGCCGTGGTGCTTGCGATGCGCCGTGACCTaGGTGCTGTCGGTGCAGCGGAAGCGGCAGCGCAGGCAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LITSCLPWCLRCAVT*VLSVQRKRQRRQWK
Trigger: CTTCCACTGCCTGCGCTGCCGCTTCCGCTGCACCGACAGCACCAAGGTCACGGCGCATCGCAAGCACCACGGCAAACAGGACGTGATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp CTGGAGCTGAACTGGCAGAAGCCCGCGGCGCTGATCACGTCCTGTTaGCCGTGGTGCTTGCGATGCGCCGTGACCTTGGTGCTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: LELNWQKPAALITSC*PWCLRCAVTLVLSV
Trigger: CACCGACAGCACCAAGGTCACGGCGCATCGCAAGCACCACGGCAAACAGGACGTGATCAGCGCCGCGGGCTTCTGCCAGTTCAGCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp CAGCCCGGGAAGGTGCAGTGGAAGTGCGAGCACTTGAGCTTGTACTaGCAGTCGGGCACGGCGCAGTCGGCGCTGGAGCTGAACTGGCAG +
Preference number: 6 (lower is better)
Translates to: QPGKVQWKCEHLSLY*QSGTAQSALELNWQ
Trigger: CTGCCAGTTCAGCTCCAGCGCCGACTGCGCCGTGCCCGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCCACTGCACCTTCCCGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp GCCCGAGAAGGGGCAGTCGGCGAAGTGGCAGCTGAGTaGGGCCTTGAAGCGCTTGAAGTCGTCCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: AREGAVGEVAAE*GLEALEVVQHQ
Trigger: CTGGTGCTGGACGACTTCAAGCGCTTCAAGGCCTCACTCAGCTGCCACTTCGCCGACTGCCCCTTCTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp GATGGGCCAGGCCCCGGCCGGCTCCGAGAGTGGCACTaGGCAGAGAGTATGAGAGACAGGACGGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: DGPGPGRLREWH*AESMRDRTERR
Trigger: TCTTCTCTCCGTCCTGTCTCTCATACTCTCTGCTCAGTGCCACTCTCGGAGCCGGCCGGGGCCTGGCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447850.3
CDS GCA 72 bp GCGCTGATCACGTCCTGTTTGCCGTGGTGCTTGCGATaGGCCGTGACCTTGGTGCTGTCGGTGCAGCGGAAG +
Preference number: 6 (lower is better)
Translates to: ALITSCLPWCLR*AVTLVLSVQRK
Trigger: CTTCCGCTGCACCGACAGCACCAAGGTCACGGCGCATCGCAAGCACCACGGCAAACAGGACGTGATCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp TCGTACTTGGAGGCCCGGGCTACCAGGTTCTGCATCTaGACACTGCTGTGCGACGGCAGGGGCAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: SYLEARATRFCI*TLLCDGRGRMV
Trigger: CACCATCCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGAACCTGGTAGCCCGGGCCTCCAAGTACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 72 bp GTGCTGAAGAGCGCGCCGCATTCCTCCACCACGCAGTaGAAGTGGGCCTTGTGGAGGAAGTCACACTGGCCG +
Preference number: 6 (lower is better)
Translates to: VLKSAPHSSTTQ*KWALWRKSHWP
Trigger: CGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGGCGCGCTCTTCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 72 bp TTGAAGTCGTCCAGCACCAGGTTGTCCACGCGGTCGTaGTGCTGCGCGTGCTTGTACATGTGCGTGCGCCCG +
Preference number: 6 (lower is better)
Translates to: LKSSSTRLSTRS*CCACLYMCVRP
Trigger: CGGGCGCACGCACATGTACAAGCACGCGCAGCACCACGACCGCGTGGACAACCTGGTGCTGGACGACTTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp TGCGTGCTGGTGCCCGAGAAGGGGCAGTCGGCGAAGTaGCAGCTGAGTGAGGCCTTGAAGCGCTTGAAGTCG +
Preference number: 6 (lower is better)
Translates to: CVLVPEKGQSAK*QLSEALKRLKS
Trigger: CGACTTCAAGCGCTTCAAGGCCTCACTCAGCTGCCACTTCGCCGACTGCCCCTTCTCGGGCACCAGCACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp AACTGGCAGAAGCCCGCGGCGCTGATCACGTCCTGTTaGCCGTGGTGCTTGCGATGCGCCGTGACCTTGGTG +
Preference number: 6 (lower is better)
Translates to: NWQKPAALITSC*PWCLRCAVTLV
Trigger: CACCAAGGTCACGGCGCATCGCAAGCACCACGGCAAACAGGACGTGATCAGCGCCGCGGGCTTCTGCCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp CTGGAGTTCTTGCTGCTCAGGGCGGAGAAGTCAACAAGGTCGTCGTaGCTGGACTCCTCGTGCTCCGTGTCCTTGGCGCCCAGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: LEFLLLRAEKSTRSS*LDSSCSVSLAPSSE
Trigger: CTCGCTGCTGGGCGCCAAGGACACGGAGCACGAGGAGTCCAGCAACGACGACCTTGTTGACTTCTCCGCCCTGAGCAGCAAGAACTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 90 bp GCAGAGGACTGCTGGCTGGTAGGGGAGGCGCTCAGGCTGGAGTTCTaGCTGCTCAGGGCGGAGAAGTCAACAAGGTCGTCGTTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: AEDCWLVGEALRLEF*LLRAEKSTRSSLLD
Trigger: GTCCAGCAACGACGACCTTGTTGACTTCTCCGCCCTGAGCAGCAAGAACTCCAGCCTGAGCGCCTCCCCTACCAGCCAGCAGTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 90 bp CGCTTGCCGAAGGGCGACATGTCCTCGATGATCCAGAAGCGCTTTTaGGCCCCCGAGGCTGTCGGCATAGAGATGGTGTTCCCTGCCGCG +
Preference number: 6 (lower is better)
Translates to: RLPKGDMSSMIQKRF*APEAVGIEMVFPAA
Trigger: CGCGGCAGGGAACACCATCTCTATGCCGACAGCCTCGGGGGCCAAAAAGCGCTTCTGGATCATCGAGGACATGTCGCCCTTCGGCAAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp CGCAGGTACACCTTCCAGGGCTCTGCCAACTTCTCCTaGACCAGCGCCTTCACGGCCTTGCCTAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RRYTFQGSANFS*TSAFTALPRKG
Trigger: GCCCTTCCTAGGCAAGGCCGTGAAGGCGCTGGTTCAGGAGAAGTTGGCAGAGCCCTGGAAGGTGTACCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS TCA 72 bp TCTTCCGCCGCTTGCCGAAGGGCGACATGTCCTCGATaGTCCAGAAGCGCTTTTTGGCCCCCGAGGCTGTCG +
Preference number: 6 (lower is better)
Translates to: SSAACRRATCPR*SRSAFWPPRLS
Trigger: CGACAGCCTCGGGGGCCAAAAAGCGCTTCTGGATCATCGAGGACATGTCGCCCTTCGGCAAGCGGCGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp AAGAAGTCGTACTTGGAGGCCCGGGCTACCAGGTTCTaGATCTGGACACTGCTGTGCGACGGCAGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: KKSYLEARATRF*IWTLLCDGRGR
Trigger: CCTGCCCCTGCCGTCGCACAGCAGTGTCCAGATGCAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 72 bp GCGTGGTCTTCTGTCCGTAGAACTGGCAGTCGGCTGTaGCACAGTCTTCGGTGGCTCGGAAGCGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: AWSSVRRTGSRL*HSLRWLGSAGS
Trigger: GCTTCCAGCGCTTCCGAGCCACCGAAGACTGTGGCACAGCCGACTGCCAGTTCTACGGACAGAAGACCACGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 72 bp CAGCCTGGCCATCATGGGCGAGATGAGGCCCTTGCTTaGAGAGATCCTCTCCATGATGGAGGCGGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: QPGHHGRDEALA*RDPLHDGGGWC
Trigger: GCACCACCCGCCTCCATCATGGAGAGGATCTCTGCAAGCAAGGGCCTCATCTCGCCCATGATGGCCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp CATCATAGCCAAACATGCCGAGGAACTCGGTCATGGTaGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: HHSQTCRGTRSW*RPRSPAARRPL
Trigger: GAGAGGCCTCCTCGCTGCGGGACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 72 bp GGTCATCATAGCCAAACATGCCGAGGAACTCGGTCATaGTGGAGGCCGCGTAGTCCCGCAGCGAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GHHSQTCRGTRS*WRPRSPAARRP
Trigger: AGGCCTCCTCGCTGCGGGACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 72 bp AAGAGCGCGCCGCATTCCTCCACCACGCAGTGGAAGTaGGCCTTGTGGAGGAAGTCACACTGGCCGTCACAG +
Preference number: 6 (lower is better)
Translates to: KSAPHSSTTQWK*ALWRKSHWPSQ
Trigger: CTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGGCGCGCTCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 72 bp GCGGGACTCCCGGCTCATCGAGGGACTCACTTCTCCTaGAACTGGAGGAATCCGGGTTTGACCTGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: AGLPAHRGTHFS*NWRNPGLTWGL
Trigger: CAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCCTCGATGAGCCGGGAGTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS CCA 72 bp ATCCTCCGCATGTGCTTCCGCGCGTGGGAGGTCATCTaGTGCTTGAGGAGGAAGGAGAACTGGCAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: ILRMCFRAWEVI*CLRRKENWQPS
Trigger: GGAGGGCTGCCAGTTCTCCTTCCTCCTCAAGCACCAGATGACCTCCCACGCGCGGAAGCACATGCGGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CAA 72 bp TGCTGGCTGGTAGGGGAGGCGCTCAGGCTGGAGTTCTaGCTGCTCAGGGCGGAGAAGTCAACAAGGTCGTCG +
Preference number: 6 (lower is better)
Translates to: CWLVGEALRLEF*LLRAEKSTRSS
Trigger: CGACGACCTTGTTGACTTCTCCGCCCTGAGCAGCAAGAACTCCAGCCTGAGCGCCTCCCCTACCAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 72 bp GCGCCGCATTCCTCCACCACGCAGTGGAAGTGGGCCTaGTGGAGGAAGTCACACTGGCCGTCACAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: APHSSTTQWKWA*WRKSHWPSQKS
Trigger: GGACTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CAA 72 bp TCCAGCATCTTCCGGGAGGACGCCGTCTTCCGCCGCTaGCCGAAGGGCGACATGTCCTCGATGATCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SSIFREDAVFRR*PKGDMSSMIQK
Trigger: CTTCTGGATCATCGAGGACATGTCGCCCTTCGGCAAGCGGCGGAAGACGGCGTCCTCCCGGAAGATGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp GAGGCCTTGAAGCGCTTGAAGTCGTCCAGCACCAGGTaGTCCACGCGGTCGTGGTGCTGCGCGTGCTTGTAC +
Preference number: 6 (lower is better)
Translates to: EALKRLKSSSTR*STRSWCCACLY
Trigger: GTACAAGCACGCGCAGCACCACGACCGCGTGGACAACCTGGTGCTGGACGACTTCAAGCGCTTCAAGGCCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp AAGGTGCAGTGGAAGTGCGAGCACTTGAGCTTGTACTaGCAGTCGGGCACGGCGCAGTCGGCGCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: KVQWKCEHLSLY*QSGTAQSALEL
Trigger: CAGCTCCAGCGCCGACTGCGCCGTGCCCGACTGCAAGTACAAGCTCAAGTGCTCGCACTTCCACTGCACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp GGATCGTTCTCCTGGAACTGGAGGAATCCGGGTTTGACCTGGGGCTaGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGCGAGGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: GSFSWNWRNPGLTWG*AFSREVVAKGEAGR
Trigger: CCTGCCCGCCTCGCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp ATGCCCTCGTCCAGCATCTTCCGGGAGGACGCCGTCTTCCGCCGCTaGCCGAAGGGCGACATGTCCTCGATGATCCAGAAGCGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: MPSSSIFREDAVFRR*PKGDMSSMIQKRFL
Trigger: CAAAAAGCGCTTCTGGATCATCGAGGACATGTCGCCCTTCGGCAAGCGGCGGAAGACGGCGTCCTCCCGGAAGATGCTGGACGAGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp CAGCTGAGTGAGGCCTTGAAGCGCTTGAAGTCGTCCAGCACCAGGTaGTCCACGCGGTCGTGGTGCTGCGCGTGCTTGTACATGTGCGTG +
Preference number: 6 (lower is better)
Translates to: QLSEALKRLKSSSTR*STRSWCCACLYMCV
Trigger: CACGCACATGTACAAGCACGCGCAGCACCACGACCGCGTGGACAACCTGGTGCTGGACGACTTCAAGCGCTTCAAGGCCTCACTCAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp AGGCCAGGGTCCGAAGTCCATTCCAACACGTGCTGCTaGGGAGTTGCAGGAGCCCCTTGTAAAGGAGGGGTC +
Preference number: 6 (lower is better)
Translates to: RPGSEVHSNTCC*GVAGAPCKGGV
Trigger: GACCCCTCCTTTACAAGGGGCTCCTGCAACTCCCCAGCAGCACGTGTTGGAATGGACTTCGGACCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 72 bp CTCCCGGCTCATCGAGGGACTCACTTCTCCTGGAACTaGAGGAATCCGGGTTTGACCTGGGGCTTGGCGTTC +
Preference number: 6 (lower is better)
Translates to: LPAHRGTHFSWN*RNPGLTWGLAF
Trigger: GAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCCTCGATGAGCCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS CCA 72 bp CAGTCCGTGGCGAGGCAAGGATCGTTCTCCTGGAACTaGAGGAATCCGGGTTTGACCTGGGGCTTGGCGTTC +
Preference number: 6 (lower is better)
Translates to: QSVARQGSFSWN*RNPGLTWGLAF
Trigger: GAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGATCCTTGCCTCGCCACGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp CCATTGGCTGCCCGCCGCTCCGCCTTCTCATGCTTCTaGATGTGCCAGGGGAGCTTGGTGGTGATGTTGGTC +
Preference number: 6 (lower is better)
Translates to: PLAARRSAFSCF*MCQGSLVVMLV
Trigger: GACCAACATCACCACCAAGCTCCCCTGGCACATCAAGAAGCATGAGAAGGCGGAGCGGCGGGCAGCCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CAA 72 bp CCTAGCCTGCCACACTCCTCGCGCTTGGTGAAGTATTaGAAGCCATTGGCTGCCCGCCGCTCCGCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: PSLPHSSRLVKY*KPLAARRSAFS
Trigger: TGAGAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAAATACTTCACCAAGCGCGAGGAGTGTGGCAGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CAA 90 bp ACTCACTTCTCCTGGAACTGGAGGAATCCGGGTTTGACCTGGGGCTaGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGCGAGGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: THFSWNWRNPGLTWG*AFSREVVAKGEAGR
Trigger: CCTGCCCGCCTCGCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS GCA 72 bp AAGAGGCCAGGGTCCGAAGTCCATTCCAACACGTGCTaGTGGGGAGTTGCAGGAGCCCCTTGTAAAGGAGGG +
Preference number: 6 (lower is better)
Translates to: KRPGSEVHSNTC*WGVAGAPCKGG
Trigger: CCCTCCTTTACAAGGGGCTCCTGCAACTCCCCAGCAGCACGTGTTGGAATGGACTTCGGACCCTGGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS GCA 72 bp GCTCGTCCCGCGTGTTCTGGTCATCATAGCCAAACATaGCGAGGAACTCGGTCATGGTGGAGGCCGCGTAGT +
Preference number: 6 (lower is better)
Translates to: ARPACSGHHSQT*RGTRSWWRPRS
Trigger: ACTACGCGGCCTCCACCATGACCGAGTTCCTCGGCATGTTTGGCTATGATGACCAGAACACGCGGGACGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 72 bp CTGCAGTCGTCCAGCGGGCTGAAACGCATGAAGCCGTaGTGCAGGGAGTTGTCGCGCTTCTTGTGCATGTTG +
Preference number: 6 (lower is better)
Translates to: LQSSSGLKRMKP*CRELSRFLCML
Trigger: CAACATGCACAAGAAGCGCGACAACTCCCTGCAGCACGGCTTCATGCGTTTCAGCCCGCTGGACGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 72 bp GGCCGAGGCCGGAAAGGCAGCCTCTGTGTTTCCTTTTaGTGCTCCTCCCTCTGTCCGGAAGTGGAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: GRGRKGSLCVSF*CSSLCPEVEVC
Trigger: GCAAACTTCCACTTCCGGACAGAGGGAGGAGCAGCAAAAGGAAACACAGAGGCTGCCTTTCCGGCCTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS GCA 72 bp TTGAAGCCATTGGCTGCCCGCCGCTCCGCCTTCTCATaGTTCTTGATGTGCCAGGGGAGCTTGGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: LKPLAARRSAFS*FLMCQGSLVVM
Trigger: CATCACCACCAAGCTCCCCTGGCACATCAAGAAGCATGAGAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS GCA 72 bp CTCTACCTTCCCAGCCCTGACAGTTTCACGGTGGCCTaGACCCTACTCAAGGCTCTGTGTGACAGCAGGACC +
Preference number: 6 (lower is better)
Translates to: LYLPSPDSFTVA*TLLKALCDSRT
Trigger: GGTCCTGCTGTCACACAGAGCCTTGAGTAGGGTGCAGGCCACCGTGAAACTGTCAGGGCTGGGAAGGTAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CCA 72 bp CCTGCCTCTACCTTCCCAGCCCTGACAGTTTCACGGTaGCCTGCACCCTACTCAAGGCTCTGTGTGACAGCA +
Preference number: 6 (lower is better)
Translates to: PASTFPALTVSR*PAPYSRLCVTA
Trigger: TGCTGTCACACAGAGCCTTGAGTAGGGTGCAGGCCACCGTGAAACTGTCAGGGCTGGGAAGGTAGAGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492173.1
CDS CAA 72 bp CGGATGTACTCCTCATACTTAGAGAACCGCGCCCGCTaGCTGAGGGTATCCTCGGAGGTGGGCAGCATGGAG +
Preference number: 6 (lower is better)
Translates to: RMYSSYLENRAR*LRVSSEVGSME
Trigger: CTCCATGCTGCCCACCTCCGAGGATACCCTCAGCAAGCGGGCGCGGTTCTCTAAGTATGAGGAGTACATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 90 bp GGTGCTCCCGTTCTGGGGCCGCAGATTCTCGCCGGTCTTCAGTTTTaGGATGAAGAAGTCGTACTTGGAGGCCCGGGCTACCAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: GAPVLGPQILAGLQF*DEEVVLGGPGYQVL
Trigger: CAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGAGAATCTGCGGCCCCAGAACGGGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 90 bp CTGAAGAGCGCGCCGCATTCCTCCACCACGCAGTGGAAGTGGGCCTaGTGGAGGAAGTCACACTGGCCGTCACAGAAGTCCTTTGTACCA +
Preference number: 6 (lower is better)
Translates to: LKSAPHSSTTQWKWA*WRKSHWPSQKSFVP
Trigger: TGGTACAAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGGCGCGCTCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CAA 90 bp GTGGCGAGGCAAGGATCGTTCTCCTGGAACTGGAGGAATCCGGGTTaGACCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: VARQGSFSWNWRNPG*TWGLAFSREVVAKG
Trigger: GCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGATCCTTGCCTCGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp GCTCATCGAGGGACTCACTTCTCCTGGAACTGGAGGAATCCGGGTTaGACCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: AHRGTHFSWNWRNPG*TWGLAFSREVVAKG
Trigger: GCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCCTCGATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS CAA 90 bp TTCACCTGGTTGTACTTGCAACCTAGCCTGCCACACTCCTCGCGCTaGGTGAAGTATTTGAAGCCATTGGCTGCCCGCCGCTCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: FTWLYLQPSLPHSSR*VKYLKPLAARRSAF
Trigger: GAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAAATACTTCACCAAGCGCGAGGAGTGTGGCAGGCTAGGTTGCAAGTACAACCAGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS TCA 72 bp GGGGCCGCAGATTCTCGCCGGTCTTCAGTTTTTGGATaGAGAAGTCGTACTTGGAGGCCCGGGCTACCAGGT +
Preference number: 6 (lower is better)
Translates to: GAADSRRSSVFG*RSRTWRPGLPG
Trigger: ACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGAGAATCTGCGGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS TCA 72 bp CCACCTGCATGCAGTGATAGTGGGTGCTCTTCCCATTaGGGTGGCAGCCGTGGTAGTAGACGCTGCAGTCGT +
Preference number: 6 (lower is better)
Translates to: PPACSDSGCSSH*GGSRGSRRCSR
Trigger: ACGACTGCAGCGTCTACTACCACGGCTGCCACCTCAATGGGAAGAGCACCCACTATCACTGCATGCAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS TCA 72 bp ACTGGTCTCGCACGTTCACCAGGTTGTTGTTGGGGTTaGTGTGGTCCAGGCAGTGGGATTCGGCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: TGLARSPGCCWG*CGPGSGIRPCQ
Trigger: CTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCTGGTGAACGTGCGAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp CATTCTCCAGGTCGTACTTGGATGGCTTCTTGTAGGTaGTCCCGTTCTGGGGCCGCAGATTCTCGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: HSPGRTWMASCR*SRSGAADSRRS
Trigger: AGACCGGCGAGAATCTGCGGCCCCAGAACGGGAGCACCTACAAGAAGCCATCCAAGTACGACCTGGAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 72 bp CCCATGTCGGGGCTGCCCTCCCCGGGTTTGAAGAGGTaGAGGTACTTGACATTCTCCAGGTCGTACTTGGAT +
Preference number: 6 (lower is better)
Translates to: PMSGLPSPGLKR*RYLTFSRSYLD
Trigger: ATCCAAGTACGACCTGGAGAATGTCAAGTACCTGCACCTCTTCAAACCCGGGGAGGGCAGCCCCGACATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS GCA 72 bp TGTACCAAACCTGCGCAGGTACACCTTCCAGGGCTCTaGCAACTTCTCCTGAACCAGCGCCTTCACGGCCTT +
Preference number: 6 (lower is better)
Translates to: CTKPAQVHLPGL*QLLLNQRLHGL
Trigger: AAGGCCGTGAAGGCGCTGGTTCAGGAGAAGTTGGCAGAGCCCTGGAAGGTGTACCTGCGCAGGTTTGGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS GCA 72 bp GCTGCCCGCCGCTCCGCCTTCTCATGCTTCTTGATGTaGCAGGGGAGCTTGGTGGTGATGTTGGTCACAAAA +
Preference number: 6 (lower is better)
Translates to: AARRSAFSCFLM*QGSLVVMLVTK
Trigger: TTTTGTGACCAACATCACCACCAAGCTCCCCTGGCACATCAAGAAGCATGAGAAGGCGGAGCGGCGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS GCA 72 bp GTGGTAGTGGGTGACCTTGAGCGAGAACTGACAAGCTaGGTCCTTGCAGTCCTCGTAAAGGTCGAAGCGCCG +
Preference number: 6 (lower is better)
Translates to: VVVGDLERELTS*VLAVLVKVEAP
Trigger: CGGCGCTTCGACCTTTACGAGGACTGCAAGGACGCAGCTTGTCAGTTCTCGCTCAAGGTCACCCACTACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp CCGCATTCCTCCACCACGCAGTGGAAGTGGGCCTTGTaGAGGAAGTCACACTGGCCGTCACAGAAGTCCTTT +
Preference number: 6 (lower is better)
Translates to: PHSSTTQWKWAL*RKSHWPSQKSF
Trigger: AAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGTGGTGGAGGAATGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CAA 72 bp TCCTGGAACTGGAGGAATCCGGGTTTGACCTGGGGCTaGGCGTTCTCTAGAGAAGTCGTTGCCAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: SWNWRNPGLTWG*AFSREVVAKGE
Trigger: CTCGCCCTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CAA 90 bp TACTTGCAACCTAGCCTGCCACACTCCTCGCGCTTGGTGAAGTATTaGAAGCCATTGGCTGCCCGCCGCTCCGCCTTCTCATGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: YLQPSLPHSSRLVKY*KPLAARRSAFSCFL
Trigger: CAAGAAGCATGAGAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAAATACTTCACCAAGCGCGAGGAGTGTGGCAGGCTAGGTTGCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS GCA 72 bp CTCCTCGCGCTTGGTGAAGTATTTGAAGCCATTGGCTaGCCGCCGCTCCGCCTTCTCATGCTTCTTGATGTG +
Preference number: 6 (lower is better)
Translates to: LLALGEVFEAIG*PPLRLLMLLDV
Trigger: CACATCAAGAAGCATGAGAAGGCGGAGCGGCGGGCAGCCAATGGCTTCAAATACTTCACCAAGCGCGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CCA 72 bp TTCTGGGGCCGCAGATTCTCGCCGGTCTTCAGTTTTTaGATGAAGAAGTCGTACTTGGAGGCCCGGGCTACC +
Preference number: 6 (lower is better)
Translates to: FWGRRFSPVFSF*MKKSYLEARAT
Trigger: GGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGAGAATCTGCGGCCCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 72 bp GTGCAGGTACTTGACATTCTCCAGGTCGTACTTGGATaGCTTCTTGTAGGTGCTCCCGTTCTGGGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: VQVLDILQVVLG*LLVGAPVLGPQ
Trigger: CTGCGGCCCCAGAACGGGAGCACCTACAAGAAGCCATCCAAGTACGACCTGGAGAATGTCAAGTACCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CCA 72 bp TCGGCTGTGCCACAGTCTTCGGTGGCTCGGAAGCGCTaGAAGCCGTCGTTAATGAGCTGGGTATTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SAVPQSSVARKR*KPSLMSWVFFL
Trigger: CAAGAAGAATACCCAGCTCATTAACGACGGCTTCCAGCGCTTCCGAGCCACCGAAGACTGTGGCACAGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp ACGCAGTGGAAGTGGGCCTTGTGGAGGAAGTCACACTaGCCGTCACAGAAGTCCTTTGTACCAAACCTGCGC +
Preference number: 6 (lower is better)
Translates to: TQWKWALWRKSH*PSQKSFVPNLR
Trigger: GCGCAGGTTTGGTACAAAGGACTTCTGTGACGGCCAGTGTGACTTCCTCCACAAGGCCCACTTCCACTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344008.5
ENST00000377022.8
CDS CCA 72 bp TCTCGCACGTTCACCAGGTTGTTGTTGGGGTTGATGTaGTCCAGGCAGTGGGATTCGGCCTTGCCAGACGTT +
Preference number: 6 (lower is better)
Translates to: SRTFTRLLLGLM*SRQWDSALPDV
Trigger: AACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCTGGTGAACGTGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp AGGAGGAAGGAGAACTGGCAGCCCTCCCGGATGCAGTaGAAGTGGCTGTTCACCTGGTTGTACTTGCAACCT +
Preference number: 6 (lower is better)
Translates to: RRKENWQPSRMQ*KWLFTWLYLQP
Trigger: AGGTTGCAAGTACAACCAGGTGAACAGCCACTTCCACTGCATCCGGGAGGGCTGCCAGTTCTCCTTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CAA 72 bp GTTCTGGGGCCGCAGATTCTCGCCGGTCTTCAGTTTTaGGATGAAGAAGTCGTACTTGGAGGCCCGGGCTAC +
Preference number: 6 (lower is better)
Translates to: VLGPQILAGLQF*DEEVVLGGPGY
Trigger: GTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGAGAATCTGCGGCCCCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 72 bp GGGCTGCCCTCCCCGGGTTTGAAGAGGTGCAGGTACTaGACATTCTCCAGGTCGTACTTGGATGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GLPSPGLKRCRY*TFSRSYLDGFL
Trigger: CAAGAAGCCATCCAAGTACGACCTGGAGAATGTCAAGTACCTGCACCTCTTCAAACCCGGGGAGGGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 72 bp AACTGGTCTCGCACGTTCACCAGGTTGTTGTTGGGGTaGATGTGGTCCAGGCAGTGGGATTCGGCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: NWSRTFTRLLLG*MWSRQWDSALP
Trigger: TGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCTGGTGAACGTGCGAGACCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp TTGTACTTGCAACCTAGCCTGCCACACTCCTCGCGCTaGGTGAAGTATTTGAAGCCATTGGCTGCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: LYLQPSLPHSSR*VKYLKPLAARR
Trigger: GCGGCGGGCAGCCAATGGCTTCAAATACTTCACCAAGCGCGAGGAGTGTGGCAGGCTAGGTTGCAAGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377022.8
ENST00000447850.3
CDS CAA 72 bp AAGGGCGACATGTCCTCGATGATCCAGAAGCGCTTTTaGGCCCCCGAGGCTGTCGGCATAGAGATGGTGTTC +
Preference number: 6 (lower is better)
Translates to: KGDMSSMIQKRF*APEAVGIEMVF
Trigger: GAACACCATCTCTATGCCGACAGCCTCGGGGGCCAAAAAGCGCTTCTGGATCATCGAGGACATGTCGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp CGCAGATTCTCGCCGGTCTTCAGTTTTTGGATGAAGAAGTCGTACTaGGAGGCCCGGGCTACCAGGTTCTGCATCTGGACACTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: RRFSPVFSFWMKKSY*EARATRFCIWTLLC
Trigger: GCACAGCAGTGTCCAGATGCAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGAGAATCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS TCA 72 bp GGACTCACTTCTCCTGGAACTGGAGGAATCCGGGTTTaGCCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTTG +
Preference number: 6 (lower is better)
Translates to: GLTSPGTGGIRV*PGAWRSLEKSL
Trigger: CAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS GCA 72 bp GGTCCAGGCAGTGGGATTCGGCCTTGCCAGACGTTTTaGAGACGTACTTGCAGTTCCCAAAGAGACAGTGGA +
Preference number: 6 (lower is better)
Translates to: GPGSGIRPCQTF*RRTCSSQRDSG
Trigger: TCCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp CACTTCTCCTGGAACTGGAGGAATCCGGGTTTGACCTaGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAG +
Preference number: 6 (lower is better)
Translates to: HFSWNWRNPGLT*GLAFSREVVAK
Trigger: CTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS CCA 72 bp TCGTTCTCCTGGAACTGGAGGAATCCGGGTTTGACCTaGGGCTTGGCGTTCTCTAGAGAAGTCGTTGCCAAG +
Preference number: 6 (lower is better)
Translates to: SFSWNWRNPGLT*GLAFSREVVAK
Trigger: CTTGGCAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp AGTGGAAGTGGAACTTGTTGGCGTACTTGCAGTCCGTaGCGAGGCAAGGATCGTTCTCCTGGAACTGGAGGA +
Preference number: 6 (lower is better)
Translates to: SGSGTCWRTCSP*RGKDRSPGTGG
Trigger: TCCTCCAGTTCCAGGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp GGGACTCACTTCTCCTGGAACTGGAGGAATCCGGGTTaGACCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTT +
Preference number: 6 (lower is better)
Translates to: GTHFSWNWRNPG*TWGLAFSREVV
Trigger: AACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAAGTGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344008.5
CDS CAA 72 bp CCAAAGAGACAGTGGAAGTGGAACTTGTTGGCGTACTaGCAGTCCGTGGCGAGGCAAGGATCGTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PKRQWKWNLLAY*QSVARQGSFSW
Trigger: CCAGGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp TGGTCCAGGCAGTGGGATTCGGCCTTGCCAGACGTTTaGCAGACGTACTTGCAGTTCCCAAAGAGACAGTGG +
Preference number: 6 (lower is better)
Translates to: WSRQWDSALPDV*QTYLQFPKRQW
Trigger: CCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp TTGGGGTTGATGTGGTCCAGGCAGTGGGATTCGGCCTaGCCAGACGTTTTGCAGACGTACTTGCAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: LGLMWSRQWDSA*PDVLQTYLQFP
Trigger: TGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp TATGCAAACTGGTCTCGCACGTTCACCAGGTTGTTGTaGGGGTTGATGTGGTCCAGGCAGTGGGATTCGGCC +
Preference number: 6 (lower is better)
Translates to: YANWSRTFTRLL*GLMWSRQWDSA
Trigger: GGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCTGGTGAACGTGCGAGACCAGTTTGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp CCGTTCTTGACAGTGGAGACGGTCCCCGTGGTGATGGAGTCTGTTTaGGAGAAGGTTGACTTCAGGTACTCGGGAGTGTTGAAGGACAGG +
Preference number: 6 (lower is better)
Translates to: PFLTVETVPVVMESV*EKVDFRYSGVLKDR
Trigger: CCTGTCCTTCAACACTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACAGACTCCATCACCACGGGGACCGTCTCCACTGTCAAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 90 bp GCTCGGAAGCGCTGGAAGCCGTCGTTAATGAGCTGGGTATTCTTCTaGTGGAAGTTCTCGTGGGTCATCACGTCAGACGTGCTCGTGTAC +
Preference number: 6 (lower is better)
Translates to: ARKRWKPSLMSWVFF*WKFSWVITSDVLVY
Trigger: GTACACGAGCACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAACGACGGCTTCCAGCGCTTCCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 90 bp TTGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTTGGCGTACTaGCAGTCCGTGGCGAGGCAAGGATCGTTCTCCTGGAACTGGAGG +
Preference number: 6 (lower is better)
Translates to: LQFPKRQWKWNLLAY*QSVARQGSFSWNWR
Trigger: CCTCCAGTTCCAGGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp CAGACGTACTTGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTaGGCGTACTTGCAGTCCGTGGCGAGGCAAGGATCGTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: QTYLQFPKRQWKWNL*AYLQSVARQGSFSW
Trigger: CCAGGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp GGGTTGATGTGGTCCAGGCAGTGGGATTCGGCCTTGCCAGACGTTTaGCAGACGTACTTGCAGTTCCCAAAGAGACAGTGGAAGTGGAAC +
Preference number: 6 (lower is better)
Translates to: GLMWSRQWDSALPDV*QTYLQFPKRQWKWN
Trigger: GTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp GGTCCCCGTGGTGATGGAGTCTGTTTTGGAGAAGGTTaGCTTCAGGTACTCGGGAGTGTTGAAGGACAGGGA +
Preference number: 6 (lower is better)
Translates to: GPRGDGVCFGEG*LQVLGSVEGQG
Trigger: TCCCTGTCCTTCAACACTCCCGAGTACCTGAAGTCAACCTTCTCCAAAACAGACTCCATCACCACGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS TCA 72 bp AAGGATCGTTCTCCTGGAACTGGAGGAATCCGGGTTTaGCCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTTG +
Preference number: 6 (lower is better)
Translates to: KDRSPGTGGIRV*PGAWRSLEKSL
Trigger: CAACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS GCA 72 bp TCTTGTGGAAGTTCTCGTGGGTCATCACGTCAGACGTaGTCGTGTACACCTTGTTACAGCCCACCTGCATGC +
Preference number: 6 (lower is better)
Translates to: SCGSSRGSSRQT*SCTPCYSPPAC
Trigger: GCATGCAGGTGGGCTGTAACAAGGTGTACACGAGCACGTCTGACGTGATGACCCACGAGAACTTCCACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS GCA 72 bp CAAAGAGACAGTGGAAGTGGAACTTGTTGGCGTACTTaGAGTCCGTGGCGAGGCAAGGATCGTTCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: QRDSGSGTCWRT*SPWRGKDRSPG
Trigger: TCCAGGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp GTGGCTCGGAAGCGCTGGAAGCCGTCGTTAATGAGCTaGGTATTCTTCTTGTGGAAGTTCTCGTGGGTCATC +
Preference number: 6 (lower is better)
Translates to: VARKRWKPSLMS*VFFLWKFSWVI
Trigger: GATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAACGACGGCTTCCAGCGCTTCCGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp TGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTTaGCGTACTTGCAGTCCGTGGCGAGGCAAGGATCGT +
Preference number: 6 (lower is better)
Translates to: CSSQRDSGSGTC*RTCSPWRGKDR
Trigger: ACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp TCGCCGGTCTTCAGTTTTTGGATGAAGAAGTCGTACTaGGAGGCCCGGGCTACCAGGTTCTGCATCTGGACA +
Preference number: 6 (lower is better)
Translates to: SPVFSFWMKKSY*EARATRFCIWT
Trigger: TGTCCAGATGCAGAACCTGGTAGCCCGGGCCTCCAAGTACGACTTCTTCATCCAAAAACTGAAGACCGGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 72 bp CAAGGATCGTTCTCCTGGAACTGGAGGAATCCGGGTTaGACCTGGGGCTTGGCGTTCTCTAGAGAAGTCGTT +
Preference number: 6 (lower is better)
Translates to: QGSFSWNWRNPG*TWGLAFSREVV
Trigger: AACGACTTCTCTAGAGAACGCCAAGCCCCAGGTCAAACCCGGATTCCTCCAGTTCCAGGAGAACGATCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp TTGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTaGGCGTACTTGCAGTCCGTGGCGAGGCAAGGATCG +
Preference number: 6 (lower is better)
Translates to: LQFPKRQWKWNL*AYLQSVARQGS
Trigger: CGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp TTGCAGACGTACTTGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTaGTTGGCGTACTTGCAGTCCGTGGCGAGGCAAGGATCGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LQTYLQFPKRQWKWN*LAYLQSVARQGSFS
Trigger: GGAGAACGATCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp TCCAGGCAGTGGGATTCGGCCTTGCCAGACGTTTTGCAGACGTACTaGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGTTGGCGTAC +
Preference number: 6 (lower is better)
Translates to: SRQWDSALPDVLQTY*QFPKRQWKWNLLAY
Trigger: GTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 90 bp AGGTTGTTGTTGGGGTTGATGTGGTCCAGGCAGTGGGATTCGGCCTaGCCAGACGTTTTGCAGACGTACTTGCAGTTCCCAAAGAGACAG +
Preference number: 6 (lower is better)
Translates to: RLLLGLMWSRQWDSA*PDVLQTYLQFPKRQ
Trigger: CTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCACTGCCTGGACCACATCAACCCCAACAACAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CAA 72 bp CGCTGGAAGCCGTCGTTAATGAGCTGGGTATTCTTCTaGTGGAAGTTCTCGTGGGTCATCACGTCAGACGTG +
Preference number: 6 (lower is better)
Translates to: RWKPSLMSWVFF*WKFSWVITSDV
Trigger: CACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAACGACGGCTTCCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 72 bp TACTTGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTaGTTGGCGTACTTGCAGTCCGTGGCGAGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: YLQFPKRQWKWN*LAYLQSVARQG
Trigger: TCCTTGCCTCGCCACGGACTGCAAGTACGCCAACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp CTCGCAGCTCTGAAGATTCTAGAATTCTCAACTCCATaGGACAGGGGTGAGGCCATGGTTAAGAGGAGGACG +
Preference number: 6 (lower is better)
Translates to: LAALKILEFSTP*DRGEAMVKRRT
Trigger: CGTCCTCCTCTTAACCATGGCCTCACCCCTGTCTCATGGAGTTGAGAATTCTAGAATCTTCAGAGCTGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472814.1
CDS GCA 72 bp GGGATTCGGCCTTGCCAGACGTTTTGCAGACGTACTTaGAGTTCCCAAAGAGACAGTGGAAGTGGAACTTGT +
Preference number: 6 (lower is better)
Translates to: GIRPCQTFCRRT*SSQRDSGSGTC
Trigger: ACAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS CCA 72 bp TGGAAGCCGTCGTTAATGAGCTGGGTATTCTTCTTGTaGAAGTTCTCGTGGGTCATCACGTCAGACGTGCTC +
Preference number: 6 (lower is better)
Translates to: WKPSLMSWVFFL*KFSWVITSDVL
Trigger: GAGCACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAACGACGGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CCA 72 bp TGCCCTCAGCTGTTCCAAGATCCATTCTCTTCTCCTTaGTCCCAAACTCATAGTCGGAGAGTCGAAAGCCGA +
Preference number: 6 (lower is better)
Translates to: CPQLFQDPFSSP*SQTHSRRVESR
Trigger: TCGGCTTTCGACTCTCCGACTATGAGTTTGGGACCAAGGAGAAGAGAATGGATCTTGGAACAGCTGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS CAA 72 bp TGGGATTCGGCCTTGCCAGACGTTTTGCAGACGTACTaGCAGTTCCCAAAGAGACAGTGGAAGTGGAACTTG +
Preference number: 6 (lower is better)
Translates to: WDSALPDVLQTY*QFPKRQWKWNL
Trigger: CAAGTTCCACTTCCACTGTCTCTTTGGGAACTGCAAGTACGTCTGCAAAACGTCTGGCAAGGCCGAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377022.8
CDS TCA 72 bp GCTTTAATTTCTCTGGGTGGGGGAACGGGAGGCGTGTaGTGGATGGCTCTTACCTTATTCATAAGCGAGGAT +
Preference number: 6 (lower is better)
Translates to: ALISLGGGTGGV*WMALTLFISED
Trigger: ATCCTCGCTTATGAATAAGGTAAGAGCCATCCATCACACGCCTCCCGTTCCCCCACCCAGAGAAATTAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490176.1
CDS CCA 72 bp TTAATGAGCTGGGTATTCTTCTTGTGGAAGTTCTCGTaGGTCATCACGTCAGACGTGCTCGTGTACACCTTG +
Preference number: 6 (lower is better)
Translates to: LMSWVFFLWKFS*VITSDVLVYTL
Trigger: CAAGGTGTACACGAGCACGTCTGACGTGATGACCCACGAGAACTTCCACAAGAAGAATACCCAGCTCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000496432.6
CDS CAA 90 bp CTGATTACTCCCCGAATAACAAGTTGTTTTAAAGCCCTGATGTCATaGCTCCTGCCGGTAACACTCAGGGTAACAGTTTGGCAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LITPRITSCFKALMS*LLPVTLRVTVWQEG
Trigger: TCCCTCCTGCCAAACTGTTACCCTGAGTGTTACCGGCAGGAGCAATGACATCAGGGCTTTAAAACAACTTGTTATTCGGGGAGTAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS CAA 72 bp CCCCGAATAACAAGTTGTTTTAAAGCCCTGATGTCATaGCTCCTGCCGGTAACACTCAGGGTAACAGTTTGG +
Preference number: 6 (lower is better)
Translates to: PRITSCFKALMS*LLPVTLRVTVW
Trigger: CCAAACTGTTACCCTGAGTGTTACCGGCAGGAGCAATGACATCAGGGCTTTAAAACAACTTGTTATTCGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496432.6
CDS CCA 72 bp ATATTTCTGGTAAATGTTTACATCTTCAGTGACGGCTaGTTTATCTGTGGGCAGTCCGTTCTTGACAGTGGA +
Preference number: 6 (lower is better)
Translates to: IFLVNVYIFSDG*FICGQSVLDSG
Trigger: TCCACTGTCAAGAACGGACTGCCCACAGATAAACCAGCCGTCACTGAAGATGTAAACATTTACCAGAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344008.5
ENST00000377022.8
ENST00000492173.1
ENST00000496432.6
CDS CAA 72 bp GCGGAGCAGGACACGATCTATGGACGTTTGGCTCACTaGTTAGGTTTTACGACTCTTAAATTAATTTGTTTT +
Preference number: 6 (lower is better)
Translates to: AEQDTIYGRLAH*LGFTTLKLICF
Trigger: AAAACAAATTAATTTAAGAGTCGTAAAACCTAACAAGTGAGCCAAACGTCCATAGATCGTGTCCTGCTCCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492173.1