RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASTOR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000274070

Ensembl transcript IDs: ENST00000616305.2, ENST00000622472.1

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCAGGAGGGACCGGCTTCCCTCGGCATCTGCCCCTGGCCGTGGGTaGGGCCGGATGAGAAGGCGGATCAGCTCACAAGCTCCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: RRRDRLPSASAPGRG*GRMRRRISSQAPWA
Trigger: GGCCCAGGGAGCTTGTGAGCTGATCCGCCTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAGGGAAGCCGGTCCCTCCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp TGGCACACCGGTGTCTCGCAGGAGGGACCGGCTTCCCTCGGCATCTaGCCCTGGCCGTGGGTGAGGCCGGATGAGAAGGCGGATCAGCTC +
Preference number: 1 (lower is better)
Translates to: WHTGVSQEGPASLGI*PWPWVRPDEKADQL
Trigger: GAGCTGATCCGCCTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAGGGAAGCCGGTCCCTCCTGCGAGACACCGGTGTGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp GCCCTCTTGGCAGTCTTGCTGGGAGTCGGGCCCAGGCCCTGTGGTTaGCAGGCGAGGTACAGGGGGAGTCTGGGTCCTTCCCAGCTCGGG +
Preference number: 1 (lower is better)
Translates to: ALLAVLLGVGPRPCG*QARYRGSLGPSQLG
Trigger: CCCGAGCTGGGAAGGACCCAGACTCCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp ACCGGTGTCTCGCAGGAGGGACCGGCTTCCCTCGGCATCTGCCCCTaGCCGTGGGTGAGGCCGGATGAGAAGGCGGATCAGCTCACAAGC +
Preference number: 1 (lower is better)
Translates to: TGVSQEGPASLGICP*PWVRPDEKADQLTS
Trigger: GCTTGTGAGCTGATCCGCCTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAGGGAAGCCGGTCCCTCCTGCGAGACACCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp TCGGGCCCAGGCCCTGTGGTTGGCAGGCGAGGTACAGGGGGAGTCTaGGTCCTTCCCAGCTCGGGGATCCCACCTGGGTTCCTGTCTGAG +
Preference number: 1 (lower is better)
Translates to: SGPGPVVGRRGTGGV*VLPSSGIPPGFLSE
Trigger: CTCAGACAGGAACCCAGGTGGGATCCCCGAGCTGGGAAGGACCCAGACTCCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp CAGGGCCCTCTTGGCAGTCTTGCTGGGAGTCGGGCCCAGGCCCTGTaGTTGGCAGGCGAGGTACAGGGGGAGTCTGGGTCCTTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: QGPLGSLAGSRAQAL*LAGEVQGESGSFPA
Trigger: AGCTGGGAAGGACCCAGACTCCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp TGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCTaGGAGTCGGGCCCAGGCCCTGTGGTTGGCAGGCGAGGTACAGGG +
Preference number: 1 (lower is better)
Translates to: CLWGRVWTGPSWQSC*ESGPGPVVGRRGTG
Trigger: CCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp ACCCTCCCTCCTCCCCCAAGGACTGAGTGCTTGTGGGGGAGGGTCTaGACAGGGCCCTCTTGGCAGTCTTGCTGGGAGTCGGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: TLPPPPRTECLWGRV*TGPSWQSCWESGPG
Trigger: GCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCTTGGGGGAGGAGGGAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 90 bp ACCGGCTTCCCTCGGCATCTGCCCCTGGCCGTGGGTGAGGCCGGATaGGAAGGCGGATCAGCTCACAAGCTCCCTGGGCCTCCGAAAGCA +
Preference number: 1 (lower is better)
Translates to: TGFPRHLPLAVGEAG*EGGSAHKLPGPPKA
Trigger: TGCTTTCGGAGGCCCAGGGAGCTTGTGAGCTGATCCGCCTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAGGGAAGCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp GAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTaGTGGGAGTCGGGCCCAGGCCCTGTGGTTGGCAGGCGAGGTACA +
Preference number: 1 (lower is better)
Translates to: ECLWGRVWTGPSWQS*WESGPGPVVGRRGT
Trigger: TGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp CCACGGCTAACCCCATGCCTCCTGGACATGACCACTCAGCTGGCCTaGCACCTGGCTGTCCACCTCCCCATGGCCCTCGGGTTCCCTCAC +
Preference number: 1 (lower is better)
Translates to: PRLTPCLLDMTTQLA*HLAVHLPMALGFPH
Trigger: GTGAGGGAACCCGAGGGCCATGGGGAGGTGGACAGCCAGGTGGCAGGCCAGCTGAGTGGTCATGTCCAGGAGGCATGGGGTTAGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp CCAAGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTaGCAGTCTTGCTGGGAGTCGGGCCCAGGCCCTGTGGTTGGCAGG +
Preference number: 1 (lower is better)
Translates to: PRTECLWGRVWTGPS*QSCWESGPGPVVGR
Trigger: CCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 90 bp GAGGGGGCCACGCTGGCCTCCACTCCGAGGGAACCAGCCCTGAGCTaGTGGAAGCAGAGACCAGTGACCACAGTACTCACCCCCAAACCC +
Preference number: 1 (lower is better)
Translates to: EGATLASTPREPALS*WKQRPVTTVLTPKP
Trigger: GGGTTTGGGGGTGAGTACTGTGGTCACTGGTCTCTGCTTCCATCAGCTCAGGGCTGGTTCCCTCGGAGTGGAGGCCAGCGTGGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp CTGCGTAAAAAGTGCCACCCACGGAGGCAGGACACAGGCAGCGTGTaGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTGCTGGCG +
Preference number: 1 (lower is better)
Translates to: LRKKCHPRRQDTGSV*PIQQAQVFRVRLLA
Trigger: CGCCAGCAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTCCTGCCTCCGTGGGTGGCACTTTTTACGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp AGCCTCTCCAGCTCAGATGCATGCCTCGGGCTGAGGACAGTGGTGTaGGCAGTGCCCCTTGAAGGAGGGCGGTCCTGGAGATGCCCATGG +
Preference number: 1 (lower is better)
Translates to: SLSSSDACLGLRTVV*AVPLEGGRSWRCPW
Trigger: CCATGGGCATCTCCAGGACCGCCCTCCTTCAAGGGGCACTGCCCACACCACTGTCCTCAGCCCGAGGCATGCATCTGAGCTGGAGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 90 bp GTCACCTCAGAGGGGCAAGCCCCTCCAGACCAAGCCTCCTCCTGCTaGACAAATGTCACCCTGGCTACGCTGCTGCTTCCGGAGGCCACA +
Preference number: 1 (lower is better)
Translates to: VTSEGQAPPDQASSC*TNVTLATLLLPEAT
Trigger: TGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTCAGCAGGAGGAGGCTTGGTCTGGAGGGGCTTGCCCCTCTGAGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp GGGTTCCCTCACCCCCTCCGGTGCTCAGATAGAACTACAGCTGGTTaGTGGGAGTTCCCATGTGGGGTGCCAGCGGCTCCAGCGTCTTGT +
Preference number: 1 (lower is better)
Translates to: GFPHPLRCSDRTTAG*WEFPCGVPAAPASC
Trigger: ACAAGACGCTGGAGCCGCTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACCGGAGGGGGTGAGGGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp TGCCAGTGGTTTGGAGTGAGGCTTTGGGTCCCCGCCTCTGAATCTTaGGGAGGGGAAGCTACCAGGGTCAGGCCTGCAAGCCTCTCCAGC +
Preference number: 1 (lower is better)
Translates to: CQWFGVRLWVPASES*GGEATRVRPASLSS
Trigger: GCTGGAGAGGCTTGCAGGCCTGACCCTGGTAGCTTCCCCTCCCCAAGATTCAGAGGCGGGGACCCAAAGCCTCACTCCAAACCACTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 90 bp GCACCTGCCCCATCCGCCAGCGCCAAGACAACAGGCCCACTCCTCTaGTTACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCAT +
Preference number: 1 (lower is better)
Translates to: APAPSASAKTTGPLL*LPPGDGRQTGKEFH
Trigger: ATGGAACTCCTTACCTGTTTGCCGTCCATCCCCCGGAGGTAATCAGAGGAGTGGGCCTGTTGTCTTGGCGCTGGCGGATGGGGCAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp CAGACCAAGCCTCCTCCTGCTGAACAAATGTCACCCTGGCTACGCTaGTGCTTCCGGAGGCCACACTGGAAGCCTCTGATCCCCCAGCTC +
Preference number: 1 (lower is better)
Translates to: QTKPPPAEQMSPWLR*CFRRPHWKPLIPQL
Trigger: GAGCTGGGGGATCAGAGGCTTCCAGTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTCAGCAGGAGGAGGCTTGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp GAACAAATGTCACCCTGGCTACGCTGCTGCTTCCGGAGGCCACACTaGAAGCCTCTGATCCCCCAGCTCCTTCCTTTCCCACCAGCAGCC +
Preference number: 1 (lower is better)
Translates to: EQMSPWLRCCFRRPH*KPLIPQLLPFPPAA
Trigger: GGCTGCTGGTGGGAAAGGAAGGAGCTGGGGGATCAGAGGCTTCCAGTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 90 bp TCTCTGCTCCTAGCTTCCCTTCAGAAGAGAGGGCCCAGGCTCCTGTaGCATCTCCCGATTCCCACTGCCTGTCCCTGGAGCCACAGAGCA +
Preference number: 1 (lower is better)
Translates to: SLLLASLQKRGPRLL*HLPIPTACPWSHRA
Trigger: TGCTCTGTGGCTCCAGGGACAGGCAGTGGGAATCGGGAGATGTCACAGGAGCCTGGGCCCTCTCTTCTGAAGGGAAGCTAGGAGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp TCCAATGCTCCAGGCCCTGCTCGGAGCGGACTAGAAGGTTGGGGGTaGTTCTTCCCATCCCCATGCAAAGCGCTTCACTCAGGAAGTGGC +
Preference number: 1 (lower is better)
Translates to: SNAPGPARSGLEGWG*FFPSPCKALHSGSG
Trigger: GCCACTTCCTGAGTGAAGCGCTTTGCATGGGGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp AGGGAGGAGGACGGCGGGGAGTCCTATGCTGGTCTAGTTGTCTGTTaGGGAGGTGGGACACCACCTAAGAAACCTCAGGCCTGGAAAGCC +
Preference number: 1 (lower is better)
Translates to: REEDGGESYAGLVVC*GGGTPPKKPQAWKA
Trigger: GGCTTTCCAGGCCTGAGGTTTCTTAGGTGGTGTCCCACCTCCCCAACAGACAACTAGACCAGCATAGGACTCCCCGCCGTCCTCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp TTCCCTCACCCCCTCCGGTGCTCAGATAGAACTACAGCTGGTTGGTaGGAGTTCCCATGTGGGGTGCCAGCGGCTCCAGCGTCTTGTAAC +
Preference number: 1 (lower is better)
Translates to: FPHPLRCSDRTTAGW*EFPCGVPAAPASCN
Trigger: GTTACAAGACGCTGGAGCCGCTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACCGGAGGGGGTGAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp AAGCCCCTCCAGACCAAGCCTCCTCCTGCTGAACAAATGTCACCCTaGCTACGCTGCTGCTTCCGGAGGCCACACTGGAAGCCTCTGATC +
Preference number: 1 (lower is better)
Translates to: KPLQTKPPPAEQMSP*LRCCFRRPHWKPLI
Trigger: GATCAGAGGCTTCCAGTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTCAGCAGGAGGAGGCTTGGTCTGGAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp GGCTCTGCCTATTACACTAACCAATGTCTCCAATGCTCCAGGCCCTaGTCGGAGCGGACTAGAAGGTTGGGGGTGCTTCTTCCCATCCCC +
Preference number: 1 (lower is better)
Translates to: GSAYYTNQCLQCSRP*SERTRRLGVLLPIP
Trigger: GGGGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTGGAGACATTGGTTAGTGTAATAGGCAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp CGGCCTCACTCAGGCTCTGCCTATTACACTAACCAATGTCTCCAATaGTCCAGGCCCTGCTCGGAGCGGACTAGAAGGTTGGGGGTGCTT +
Preference number: 1 (lower is better)
Translates to: RPHSGSAYYTNQCLQ*SRPCSERTRRLGVL
Trigger: AAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTGGAGACATTGGTTAGTGTAATAGGCAGAGCCTGAGTGAGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp GTGTACAATAGATACGTCCTAGGAAGTCTAGGGGACACACGACTCTaGGGTCACGGGGCCGACACACTTGCACGGCGGGAAGGAAAGGCA +
Preference number: 1 (lower is better)
Translates to: VYNRYVLGSLGDTRL*GHGADTLARREGKA
Trigger: TGCCTTTCCTTCCCGCCGTGCAAGTGTGTCGGCCCCGTGACCCCAGAGTCGTGTGTCCCCTAGACTTCCTAGGACGTATCTATTGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp AATGTCTCCAATGCTCCAGGCCCTGCTCGGAGCGGACTAGAAGGTTaGGGGTGCTTCTTCCCATCCCCATGCAAAGCGCTTCACTCAGGA +
Preference number: 1 (lower is better)
Translates to: NVSNAPGPARSGLEG*GCFFPSPCKALHSG
Trigger: TCCTGAGTGAAGCGCTTTGCATGGGGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTGGAGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp AAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTaGGGGGTGGAGGCCATCACGCCCATACACGTGTGCACACACAGC +
Preference number: 1 (lower is better)
Translates to: KNIWWLKCARVYGRR*GVEAITPIHVCTHS
Trigger: GCTGTGTGTGCACACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp CTCAGCACCCTTCCCACGTCCCATGTCACAGGCTCTTTGAGCTGCTaGCTTTGTTCTCTCAAGTCAGGTCTGAGGGAACCCATCGGCTTC +
Preference number: 1 (lower is better)
Translates to: LSTLPTSHVTGSLSC*LCSLKSGLREPIGF
Trigger: GAAGCCGATGGGTTCCCTCAGACCTGACTTGAGAGAACAAAGCCAGCAGCTCAAAGAGCCTGTGACATGGGACGTGGGAAGGGTGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp GGGCCTTCAACACCCACAAGGATTTTAAAGAACAGCTTCTCCTTCTaGTGGGCTTCCAGGGCTCAGAGGGTCCCACTCAGAGAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: GPSTPTRILKNSFSF*WASRAQRVPLREAG
Trigger: CCCTGCTTCTCTGAGTGGGACCCTCTGAGCCCTGGAAGCCCACCAGAAGGAGAAGCTGTTCTTTAAAATCCTTGTGGGTGTTGAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp GGGAGGTGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTaGGCTTTAACAGGGGCCTGGCCCTTCCTGTCTTCCCAGTCTTCT +
Preference number: 1 (lower is better)
Translates to: GRWPVFTFEDHQIVP*ALTGAWPFLSSQSS
Trigger: AGAAGACTGGGAAGACAGGAAGGGCCAGGCCCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp CCTTCAACACCCACAAGGATTTTAAAGAACAGCTTCTCCTTCTGGTaGGCTTCCAGGGCTCAGAGGGTCCCACTCAGAGAAGCAGGGAAC +
Preference number: 1 (lower is better)
Translates to: PSTPTRILKNSFSFW*ASRAQRVPLREAGN
Trigger: GTTCCCTGCTTCTCTGAGTGGGACCCTCTGAGCCCTGGAAGCCCACCAGAAGGAGAAGCTGTTCTTTAAAATCCTTGTGGGTGTTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 90 bp CAGCCCCTTCCAATCAGAGCTGGGCTGTATCAAACCAGAGCATGGTaGAGGCAACGGCGTGTGAATTCTGAGGCTAGGGATAAAAATAAC +
Preference number: 1 (lower is better)
Translates to: QPLPIRAGLYQTRAW*RQRRVNSEARDKNN
Trigger: GTTATTTTTATCCCTAGCCTCAGAATTCACACGCCGTTGCCTCCACCATGCTCTGGTTTGATACAGCCCAGCTCTGATTGGAAGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 90 bp CCAGGGTCTGCATTCGAGTCCTGCCCTCACTCACCTAATCATTTCTaGACTCAAGGCCTGACAACAAGACTGCTACTGAGAACTCAAAAT +
Preference number: 1 (lower is better)
Translates to: PGSAFESCPHSPNHF*TQGLTTRLLLRTQN
Trigger: ATTTTGAGTTCTCAGTAGCAGTCTTGTTGTCAGGCCTTGAGTGCAGAAATGATTAGGTGAGTGAGGGCAGGACTCGAATGCAGACCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CAA 90 bp GGCCCTCTTGGCAGTCTTGCTGGGAGTCGGGCCCAGGCCCTGTGGTaGGCAGGCGAGGTACAGGGGGAGTCTGGGTCCTTCCCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: GPLGSLAGSRAQALW*AGEVQGESGSFPAR
Trigger: CCGAGCTGGGAAGGACCCAGACTCCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGGAGAGGCCTTGGCGTaGGCCCCTGCCCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCGEALA*APALEG
Trigger: TCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTGGGCCCAGGCTCCTGTaGCATCTCCCGATTCCCACT +
Preference number: 2 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRGPRLL*HLPIPT
Trigger: AGTGGGAATCGGGAGATGTCACAGGAGCCTGGGCCC...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACCCTCTTGGCAGTCTTaGTGGGAGTCGGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSPSWQS*WESGPG
Trigger: GCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTCGAGGGAACCAGCCCTaGGCTGATGGAAGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRRGNQP*ADGSRD
Trigger: GTCTCTGCTTCCATCAGCTCAGGGCTGGTTCCCTCG...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTAGTTCCCATGTGGGGTaGCAGCGGCTCCAGCGTCTT +
Preference number: 2 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRSSHVG*QRLQRL
Trigger: AAGACGCTGGAGCCGCTGGCACCCCACATGGGAACT...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGTGGGTGAGGCCGGATaGGAAGGCGGATCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCVGEAG*EGGSAH
Trigger: GTGAGCTGATCCGCCTTCTCATCCGGCCTCACCCAC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTTGGGTCAAGTACTCATaGATGCCACAGCCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRWVKYS*MPQPPA
Trigger: GGCTGGGGGCTGTGGCATTCATGAGTACTTGACCCA...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGGCTTCCCTCGGCATCTaGCCCTGGCCGTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTASLGI*PWPWVR
Trigger: CCTCACCCACGGCCAGGGGCAGATGCCGAGGGAAGC...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGGCATGGAGAGGCCTTaGCGTGGGCCCCTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGGMERP*RGPLPW
Trigger: CCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATGCC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGGAAGCAGAGACCAGTaGCCACAGTACTCACCCCCA +
Preference number: 2 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCGSRDQ*PQYSPP
Trigger: TGGGGGTGAGTACTGTGGTCACTGGTCTCTGCTTCC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCTCGGCATCTGCCCCTaGCCGTGGGTGAGGCCGGAT +
Preference number: 2 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGLGICP*PWVRPD
Trigger: ATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGGGTACAGGGGGAGTCTaGGTCCTTCCCAGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQGTGGV*VLPSSG
Trigger: CCCCGAGCTGGGAAGGACCCAGACTCCCCCTGTACC...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACGGGGAGTCCTATGCTaGTCTAGTTGTCTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSRGVLC*SSCLLG
Trigger: CCCCAACAGACAACTAGACCAGCATAGGACTCCCCG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCTGTCCACCTCCCCATaGCCCTCGGGTTCCCTCACC +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTLSTSP*PSGSLT
Trigger: GGTGAGGGAACCCGAGGGCCATGGGGAGGTGGACAG...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCATGCCTCCTGGACATaGCCACTCAGCTGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTHASWT*PLSWPA
Trigger: GGCAGGCCAGCTGAGTGGTCATGTCCAGGAGGCATG...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGACCACTCAGCTGGCCTaGCACCTGGCTGTCCACCTC +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTTTQLA*HLAVHL
Trigger: GAGGTGGACAGCCAGGTGGCAGGCCAGCTGAGTGGT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGGTGTATGGCAGACGGTaGGGGGTGGAGGCCATCACG +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTVYGRR*GVEAIT
Trigger: CGTGATGGCCTCCACCCCGCACCGTCTGCCATACAC...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGGCGCCCAGGGATCTTaGCTGGGGAAAGTGGGGTGC +
Preference number: 2 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGGAQGS*LGKVGC
Trigger: GCACCCCACTTTCCCCAGGCAAGATCCCTGGGCGCC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGAACAGGGACCACCCCTaGAGAGCCAGCCAGGGCGGA +
Preference number: 2 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGNRDHP*RASQGG
Trigger: TCCGCCCTGGCTGGCTCTGCAGGGGTGGTCCCTGTT...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGTCTTGGCAGTCTTGCTaGGAGTCGGGCCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQSWQSC*ESGPGP
Trigger: AGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGA...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAAGAACTACAGCTGGTTaGTGGGAGTTCCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSRTTAG*WEFPCG
Trigger: CCCACATGGGAACTCCCACCAACCAGCTGTAGTTCT...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCATGGCCACCTCCCTTTTaGGACCAGCAATGTACGAGT +
Preference number: 2 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSWPPPF*DQQCTS
Trigger: ACTCGTACATTGCTGGTCCCAAAAGGGAGGTGGCCA...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGATGTGCCCGCGTGTATaGCAGACGGTGCGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTMCPRV*QTVRGG
Trigger: TCCACCCCGCACCGTCTGCCATACACGCGGGCACAT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CAA 90 bp CAATGTCTCCAATGCTCCAGGCCCTGCTCGGAGCGGACTAGAAGGTaGGGGGTGCTTCTTCCCATCCCCATGCAAAGCGCTTCACTCAGG +
Preference number: 2 (lower is better)
Translates to: QCLQCSRPCSERTRR*GVLLPIPMQSASLR
Trigger: CCTGAGTGAAGCGCTTTGCATGGGGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTGGAGACATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCCCTGCAAGGTGACATaGCAGCTGGCACACCGGTGT +
Preference number: 2 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQPCKVT*QLAHRC
Trigger: ACACCGGTGTGCCAGCTGTCATGTCACCTTGCAGGG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCTCACCAGCCCCGATaGCCTGAGGGGGCCACGCTG +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPHQPR*PEGATL
Trigger: CAGCGTGGCCCCCTCAGGTCATCGGGGCTGGTGAGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCTGCCCTGGAGGGATTaGCAATCGAGGGAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQLPWRD*QSRESP
Trigger: GGGAGACTCCCTCGATTGCCAATCCCTCCAGGGCAG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCAGCTCACAAGCTCCCTaGGCCTCCGAAAGCATTTTC +
Preference number: 2 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCSSQAP*ASESIF
Trigger: GAAAATGCTTTCGGAGGCCCAGGGAGCTTGTGAGCT...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGGGGTGCAGAAGGCATaGCCCACGCCACAGCGGGCT +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAGVQKA*PTPQRA
Trigger: AGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACCCAGGTCTTCAGGGTaGGGCTGCTGGCGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAPRSSG*GCWRGQ
Trigger: CTGCCCTCGCCAGCAGCCTCACCCTGAAGACCTGGG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCACGGCTAACCCCATaGCTCCTGGACATGACCACT +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTPRLTP*LLDMTT
Trigger: AGTGGTCATGTCCAGGAGGCATGGGGTTAGCCGTGG...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGGGAGGGGTGGTCACTaGTCTGTTCCTCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGGRGGH*SVPPHP
Trigger: AGGATGGGGAGGAACAGAGCAGTGACCACCCCTCCC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCGGGCCCAGGCCCTGTaGTTGGCAGGCGAGGTACAG +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGRAQAL*LAGEVQ
Trigger: CTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGGGAAAGGCAGAGAAGTaGCACCGTCAGGGGGAAATG +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTGKAEK*HRQGEM
Trigger: CATTTCCCCCTGACGGTGTCACTTCTCTGCCTTTCC...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCCCAGGCCCTGTGGTTaGCAGGCGAGGTACAGGGGG +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEPRPCG*QARYRG
Trigger: CCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCGCAGACGGTGCGGGGTaGAGGCCATCACGCCCATAC +
Preference number: 2 (lower is better)
Translates to: GDQTKTTLHTERREDKPSADGAG*RPSRPY
Trigger: GTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGC...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCTCCAAGTGGGGTCTaGGGCCTGGAGAGACCCTCC +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPPSGV*GLERPS
Trigger: GGAGGGTCTCTCCAGGCCCCAGACCCCACTTGGAGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACTTGGCGTGGGCCCCTaGCCTGGAGGGATTGGCAAT +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSALGVGP*PGGIGN
Trigger: ATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGGGGGACAGGAGCTGGTaGTCCAGGCTGGTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: ELKIYGGSNVPACMADGAGDRSW*SRLVGL
Trigger: GAGACCCACCAGCCTGGAGCACCAGCTCCTGTCCCC...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTCACCCTGGCTACGCTaGTGCTTCCGGAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGSPWLR*CFRRPH
Trigger: GTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGATCTGCCCCTGGCCGTaGGTGAGGCCGGATGAGAAG +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGICPWP*VRPDEK
Trigger: CTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGAT...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCTGAGGGGGCCACGCTaGCCTCCACTCCGAGGGAAC +
Preference number: 2 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHLRGPR*PPLRGN
Trigger: GTTCCCTCGGAGTGGAGGCCAGCGTGGCCCCCTCAG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTTGTGGGGGAGGGTCTaGACAGGGCCCTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGLWGRV*TGPSWQ
Trigger: CTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGACACAGGCAGCGTGTaGCCCATTCAGCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGDTGSV*PIQQAQ
Trigger: CTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGACCTGGGTTCCTGTCTaGGCCTCACCAGCCCCGATG +
Preference number: 2 (lower is better)
Translates to: ELKIYGGSNVPACMADGATWVPV*ASPAPM
Trigger: CATCGGGGCTGGTGAGGCTCAGACAGGAACCCAGGT...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAACAGGCCCACTCCTCTaGTTACCTCCGGGGGATGGA +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSATGPLL*LPPGDG
Trigger: TCCATCCCCCGGAGGTAATCAGAGGAGTGGGCCTGT...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCGTGGGCCCCTGCCCTaGAGGGATTGGCAATCGAGG +
Preference number: 2 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHRGPLP*RDWQSR
Trigger: CCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACGTGGGAGTTCCCATGTaGGGTGCCAGCGGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHVGVPM*GASGSS
Trigger: GCTGGAGCCGCTGGCACCCCACATGGGAACTCCCAC...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGAGCAGCCCTGTGGGTTaGCCCACCTGGGGAAGGACT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESSPVG*PTWGRT
Trigger: AGTCCTTCCCCAGGTGGGCCAACCCACAGGGCTGCT...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CAA 90 bp GAGCCACAGAGCACCAGCTTAGTGACACAGAGCCTCCAGGCTCCCTaGACAGAACTCAAACAGGTCCTATCCCTGCCAAACAGAAACTAC +
Preference number: 2 (lower is better)
Translates to: EPQSTSLVTQSLQAP*TELKQVLSLPNRNY
Trigger: GTAGTTTCTGTTTGGCAGGGATAGGACCTGTTTGAGTTCTGTCAAGGGAGCCTGGAGGCTCTGTGTCACTAAGCTGGTGCTCTGTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCGAACCAGCCCTGAGCTaGTGGAAGCAGAGACCAGTG +
Preference number: 2 (lower is better)
Translates to: GDQTKTTLHTERREDKPSEPALS*WKQRPV
Trigger: CACTGGTCTCTGCTTCCATCAGCTCAGGGCTGGTTC...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCCTACTGGGGGAAGCTaGGGCTCTACCTGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEPTGGS*GSTCPS
Trigger: ACTTGGGCAGGTAGAGCCTCAGCTTCCCCCAGTAGG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGCCTCCAGGCTCCCTTaGCAGAACTCAAACAGGTCC +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGASRLP*QNSNRS
Trigger: GGACCTGTTTGAGTTCTGTCAAGGGAGCCTGGAGGC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGGGAAAATCAAGGCCTTaGAAGGTCAGAAAGGGGACT +
Preference number: 2 (lower is better)
Translates to: PHPEELWRPNQDYATHRTGKSRP*KVRKGT
Trigger: AGTCCCCTTTCTGACCTTGCAAGGCCTTGATTTTCC...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCACTGGTACTCTGAGTaGAGCAAGGGGAGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGHWYSE*SKGRGW
Trigger: CCACCCTCTCCCCTTGCTGCACTCAGAGTACCAGTG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTGGACAGGGCCCTCTTaGCAGTCTTGCTGGGAGTCG +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEWTGPS*QSCWES
Trigger: CGACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGAGGACTGAGTGCTTGTaGGGGAGGGTCTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIERTECL*GRVWTG
Trigger: CCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCAGCTTCTCCTTCTGGTaGGCTTCCAGGGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: GDQTKTTLHTERREDKPSSFSFW*ASRAQR
Trigger: CCTCTGAGCCCTGGAAGCCCACCAGAAGGAGAAGCT...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCCTTGCCTGGGGAAAGTaGGGTGCAGAAGGCATGACC +
Preference number: 2 (lower is better)
Translates to: GDQTKTTLHTERREDKPSLAWGK*GAEGMT
Trigger: GGTCATGCCTTCTGCACCCCACTTTCCCCAGGCAAG...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCATATCCCTGGAAAATGTaGCCAGGAGGAGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAYPWKM*PGGGGQ
Trigger: CTGGCCCCCTCCTCCTGGCCACATTTTCCAGGGATA...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGTTGCTGCAGTGAGCTaGGATCATGCCACAGCACTC +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAVAAVS*DHATAL
Trigger: GAGTGCTGTGGCATGATCTCAGCTCACTGCAGCAAC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACAAGCCTCCTCCTGCTaGACAAATGTCACCCTGGCT +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAQASSC*TNVTLA
Trigger: AGCCAGGGTGACATTTGTTCAGCAGGAGGAGGCTTG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCCTCCAAAGTTTGGGTaGGGGGCAGGGGTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEPPKFG*GAGVSN
Trigger: ATTGGAGACCCCTGCCCCTCACCCAAACTTTGGAGG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGATTGCAGGGCTGAGGTaGTCTTGCCCTAAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEIAGLR*SCPKAP
Trigger: GGGGGCTTTAGGGCAAGAGCACCTCAGCCCTGCAAT...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACTAGAAGGTTGGGGGTaGTTCTTCCCATCCCCATGC +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSALEGWG*FFPSPC
Trigger: GCATGGGGATGGGAAGAAGCACCCCCAACCTTCTAG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCAGGGATGTCCCTACTaGGGGAAGCTGAGGCTCTAC +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEQGCPY*GKLRLY
Trigger: GTAGAGCCTCAGCTTCCCCCAGTAGGGACATCCCTG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGACTAGCCAGACGTGGTaGTGCGTGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGTSQTW*CVPVIP
Trigger: TGGGATTACAGGCACGCACCACCACGTCTGGCTAGT...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAAGCGGACTAGAAGGTTaGGGGTGCTTCTTCCCATCC +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSASGLEG*GCFFPS
Trigger: GGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCT...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCTCTCAAGTCAGGTCTaGGGGAACCCATCGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIELSSQV*GNPSAS
Trigger: AGAAGCCGATGGGTTCCCTCAGACCTGACTTGAGAG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCTCAAGTACTCATGAATaGCACAGCCCCCAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: GDQTKTTLHTERREDKPSSSTHE*HSPQPR
Trigger: CCTTGGCTGGGGGCTGTGGCATTCATGAGTACTTGA...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCCTCACCCCCTCCGGTaGTCAGATAGAACTACAGCT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEPHPLR*SDRTTA
Trigger: AGCTGTAGTTCTATCTGAGCACCGGAGGGGGTGAGG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCCGAGATCGCACCACTaGACTCCAGCCTGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEPRSHH*TPACLK
Trigger: TTTGAGACAGGCTGGAGTGCAGTGGTGCGATCTCGG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGGCCTGCTGTTCACCCTaGCACCTCCAAAGTTTGGGT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEACCSP*HLQSLG
Trigger: ACCCAAACTTTGGAGGTGGCAGGGTGAACAGCAGGC...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCAAGAAACCTCAGGCCTaGAAAGCCAGGGATGTCCCT +
Preference number: 2 (lower is better)
Translates to: GDQTKTTLHTERREDKPSKKPQA*KARDVP
Trigger: AGGGACATCCCTGGCTTTCCAGGCCTGAGGTTTCTT...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGGGTCTAGTTGTCTGTTaGGGAGGTGGGACACCACCT +
Preference number: 2 (lower is better)
Translates to: ELKIYGGSNVPACMADGAGLVVC*GGGTPP
Trigger: AGGTGGTGTCCCACCTCCCCAACAGACAACTAGACC...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTCCTGGAGATGCCCATaGAGGAAGGAGGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESWRCP*RKEVQS
Trigger: ACTCTGCACCTCCTTCCTCCATGGGCATCTCCAGGA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCACCAAATAGTGCCCTaGGCTTTAACAGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEHQIVP*ALTGAW
Trigger: CCAGGCCCCTGTTAAAGCCCAGGGCACTATTTGGTG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAAAGGCTCAGTTAAGCTaGCTCCTGGGTCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAKAQLS*LLGQVL
Trigger: GAGTACTTGACCCAGGAGGCAGCTTAACTGAGCCTT...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAACAGGCTCTTTGAGCTaGTGGCTTTGTTCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: ENSKYSKSQSHISGVGSATGSLS*WLCSLK
Trigger: CTTGAGAGAACAAAGCCAGCAGCTCAAAGAGCCTGT...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCGTCAAAAATCCCATTaGCCAGGCGGGGTATCTCAT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIERQKSH*PGGVSH
Trigger: ATGAGATACCCCGCCTGGCCAATGGGATTTTTGACG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTCTGCATTCGAGTCCTaGCCTCACTCACCTAATCAT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESAFES*PHSPNH
Trigger: ATGATTAGGTGAGTGAGGGCAGGACTCGAATGCAGA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR TCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGGGGGTTGAGACTATCTaGGCTTTTCTTAATGGAGAA +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEGVETI*AFLNGE
Trigger: TTCTCCATTAAGAAAAGCTCAGATAGTCTCAACCCC...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTCTGTAGAGAAATACTaGAAGATCAATCTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESVEKY*KINLQG
Trigger: ACCCTGAAGATTGATCTTGCAGTATTTCTCTACAGA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp GGTGTCTCGCAGGAGGGACCGGCTTCCCTCGGCATCTaGCCCTGGCCGTGGGTGAGGCCGGATGAGAAGGCG +
Preference number: 3 (lower is better)
Translates to: GVSQEGPASLGI*PWPWVRPDEKA
Trigger: CGCCTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAGGGAAGCCGGTCCCTCCTGCGAGACACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 72 bp CCACCTGGGTTCCTGTCTGAGCCTCACCAGCCCCGATaGCCTGAGGGGGCCACGCTGGCCTCCACTCCGAGG +
Preference number: 3 (lower is better)
Translates to: PPGFLSEPHQPR*PEGATLASTPR
Trigger: CCTCGGAGTGGAGGCCAGCGTGGCCCCCTCAGGTCATCGGGGCTGGTGAGGCTCAGACAGGAACCCAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp AGCTCCCACGGAGCGGGCTTGAACAGGGACCACCCCTaGAGAGCCAGCCAGGGCGGAGAGCCATACCCTGGC +
Preference number: 3 (lower is better)
Translates to: SSHGAGLNRDHP*RASQGGEPYPG
Trigger: GCCAGGGTATGGCTCTCCGCCCTGGCTGGCTCTGCAGGGGTGGTCCCTGTTCAAGCCCGCTCCGTGGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 72 bp CCTCGGCATCTGCCCCTGGCCGTGGGTGAGGCCGGATaGGAAGGCGGATCAGCTCACAAGCTCCCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: PRHLPLAVGEAG*EGGSAHKLPGP
Trigger: AGGCCCAGGGAGCTTGTGAGCTGATCCGCCTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp ACCCCATGCCTCCTGGACATGACCACTCAGCTGGCCTaGCACCTGGCTGTCCACCTCCCCATGGCCCTCGGG +
Preference number: 3 (lower is better)
Translates to: TPCLLDMTTQLA*HLAVHLPMALG
Trigger: CCCGAGGGCCATGGGGAGGTGGACAGCCAGGTGGCAGGCCAGCTGAGTGGTCATGTCCAGGAGGCATGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp GAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTaGCAATCGAGGGAGTCTCCCACAGAGGCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: ERPWRGPLPWRD*QSRESPTEAPS
Trigger: GGAAGGGGCCTCTGTGGGAGACTCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp GCAGTCTTGCTGGGAGTCGGGCCCAGGCCCTGTGGTTaGCAGGCGAGGTACAGGGGGAGTCTGGGTCCTTCC +
Preference number: 3 (lower is better)
Translates to: AVLLGVGPRPCG*QARYRGSLGPS
Trigger: GGAAGGACCCAGACTCCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CTTGGCAGTCTTGCTGGGAGTCGGGCCCAGGCCCTGTaGTTGGCAGGCGAGGTACAGGGGGAGTCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: LGSLAGSRAQAL*LAGEVQGESGS
Trigger: GGACCCAGACTCCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTCTGGACAGGGCCCTCTaGGCAGTCTTGCTGGGAGTC +
Preference number: 3 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRLDRAL*AVLLGV
Trigger: GACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCAG...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 72 bp GGGATCTTGCCTGGGGAAAGTGGGGTGCAGAAGGCATaGCCCACGCCACAGCGGGCTCTCAGCACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: GILPGESGVQKA*PTPQRALSTLP
Trigger: GGGAAGGGTGCTGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCAAGATCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CCTCCCCCAAGGACTGAGTGCTTGTGGGGGAGGGTCTaGACAGGGCCCTCTTGGCAGTCTTGCTGGGAGTCG +
Preference number: 3 (lower is better)
Translates to: PPPRTECLWGRV*TGPSWQSCWES
Trigger: CGACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCTTGGGGGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp TGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTaGGGGGTGGAGGCCATCACGCCCATACACGTGTGC +
Preference number: 3 (lower is better)
Translates to: WWLKCARVYGRR*GVEAITPIHVC
Trigger: GCACACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CCCCTCCGGTGCTCAGATAGAACTACAGCTGGTTGGTaGGAGTTCCCATGTGGGGTGCCAGCGGCTCCAGCG +
Preference number: 3 (lower is better)
Translates to: PLRCSDRTTAGW*EFPCGVPAAPA
Trigger: CGCTGGAGCCGCTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACCGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CAAATAAGGGCGCCCAGGGATCTTGCCTGGGGAAAGTaGGGTGCAGAAGGCATGACCCACGCCACAGCGGGC +
Preference number: 3 (lower is better)
Translates to: QIRAPRDLAWGK*GAEGMTHATAG
Trigger: GCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCAAGATCCCTGGGCGCCCTTATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGGGGCGCCCAGGGATCTaGCCTGGGGAAAGTGGGGTG +
Preference number: 3 (lower is better)
Translates to: PHPEELWRPNQDYATHRTGRPGI*PGESGV
Trigger: CACCCCACTTTCCCCAGGCAAGATCCCTGGGCGCCC...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 72 bp GAGGGGCAAGCCCCTCCAGACCAAGCCTCCTCCTGCTaGACAAATGTCACCCTGGCTACGCTGCTGCTTCCG +
Preference number: 3 (lower is better)
Translates to: EGQAPPDQASSC*TNVTLATLLLP
Trigger: CGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTCAGCAGGAGGAGGCTTGGTCTGGAGGGGCTTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CACCCCCTCCGGTGCTCAGATAGAACTACAGCTGGTTaGTGGGAGTTCCCATGTGGGGTGCCAGCGGCTCCA +
Preference number: 3 (lower is better)
Translates to: HPLRCSDRTTAG*WEFPCGVPAAP
Trigger: TGGAGCCGCTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACCGGAGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 72 bp CCATCCGCCAGCGCCAAGACAACAGGCCCACTCCTCTaGTTACCTCCGGGGGATGGACGGCAAACAGGTAAG +
Preference number: 3 (lower is better)
Translates to: PSASAKTTGPLL*LPPGDGRQTGK
Trigger: CTTACCTGTTTGCCGTCCATCCCCCGGAGGTAATCAGAGGAGTGGGCCTGTTGTCTTGGCGCTGGCGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp CCAGGCCCTGCTCGGAGCGGACTAGAAGGTTGGGGGTaGTTCTTCCCATCCCCATGCAAAGCGCTTCACTCA +
Preference number: 3 (lower is better)
Translates to: PGPARSGLEGWG*FFPSPCKALHS
Trigger: TGAGTGAAGCGCTTTGCATGGGGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp AGATACGTCCTAGGAAGTCTAGGGGACACACGACTCTaGGGTCACGGGGCCGACACACTTGCACGGCGGGAA +
Preference number: 3 (lower is better)
Translates to: RYVLGSLGDTRL*GHGADTLARRE
Trigger: TTCCCGCCGTGCAAGTGTGTCGGCCCCGTGACCCCAGAGTCGTGTGTCCCCTAGACTTCCTAGGACGTATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp TTTGGAGTGAGGCTTTGGGTCCCCGCCTCTGAATCTTaGGGAGGGGAAGCTACCAGGGTCAGGCCTGCAAGC +
Preference number: 3 (lower is better)
Translates to: FGVRLWVPASES*GGEATRVRPAS
Trigger: GCTTGCAGGCCTGACCCTGGTAGCTTCCCCTCCCCAAGATTCAGAGGCGGGGACCCAAAGCCTCACTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CGAGCGCCATATTGTGAAGACACTCAAGCAGCCCTGTaGGTTGGCCCACCTGGGGAAGGACTGAGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: RAPYCEDTQAAL*VGPPGEGLRPP
Trigger: AGGAGGCCTCAGTCCTTCCCCAGGTGGGCCAACCCACAGGGCTGCTTGAGTGTCTTCACAATATGGCGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGGGCATGGAGAGGCCTaGGCGTGGGCCCCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAGHGEA*AWAPAL
Trigger: CAGGGCAGGGGCCCACGCCAAGGCCTCTCCATGCCC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp CCTCCTCCTGCTGAACAAATGTCACCCTGGCTACGCTaGTGCTTCCGGAGGCCACACTGGAAGCCTCTGATC +
Preference number: 3 (lower is better)
Translates to: PPPAEQMSPWLR*CFRRPHWKPLI
Trigger: GATCAGAGGCTTCCAGTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTCAGCAGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp GACGGCGGGGAGTCCTATGCTGGTCTAGTTGTCTGTTaGGGAGGTGGGACACCACCTAAGAAACCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: DGGESYAGLVVC*GGGTPPKKPQA
Trigger: GGCCTGAGGTTTCTTAGGTGGTGTCCCACCTCCCCAACAGACAACTAGACCAGCATAGGACTCCCCGCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CAGACCAAGCCTCCTCCTGCTGAACAAATGTCACCCTaGCTACGCTGCTGCTTCCGGAGGCCACACTGGAAG +
Preference number: 3 (lower is better)
Translates to: QTKPPPAEQMSP*LRCCFRRPHWK
Trigger: CTTCCAGTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTCAGCAGGAGGAGGCTTGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGCCCTCTTGGCAGTCTaGCTGGGAGTCGGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGALLAV*LGVGPR
Trigger: CCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCATCCCACGGAGCGGGCTaGAACAGGGACCACCCCTGC +
Preference number: 3 (lower is better)
Translates to: ENSKYSKSQSHISGVGSASHGAG*NRDHPC
Trigger: GCAGGGGTGGTCCCTGTTCAAGCCCGCTCCGTGGGA...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp GAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTaGCAGCGGCTCCAGCGTCTTGTAACAGATCTCTGC +
Preference number: 3 (lower is better)
Translates to: ELQLVGGSSHVG*QRLQRLVTDLC
Trigger: GCAGAGATCTGTTACAAGACGCTGGAGCCGCTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp CCCTCTCCCCTGGAGCCAGGGTCTGCATTCGAGTCCTaGCCTCACTCACCTAATCATTTCTGCACTCAAGGC +
Preference number: 3 (lower is better)
Translates to: PSPLEPGSAFES*PHSPNHFCTQG
Trigger: GCCTTGAGTGCAGAAATGATTAGGTGAGTGAGGGCAGGACTCGAATGCAGACCCTGGCTCCAGGGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGAGCCTCCAGGCTCCCTaGACAGAACTCAAACAGGTC +
Preference number: 3 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQSLQAP*TELKQV
Trigger: GACCTGTTTGAGTTCTGTCAAGGGAGCCTGGAGGCT...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTGTGGGCAGTGCCCCTaGAAGGAGGGCGGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGCGQCP*KEGGPG
Trigger: TCCAGGACCGCCCTCCTTCAAGGGGCACTGCCCACA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGACGGGGCCGACACACTaGCACGGCGGGAAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIETGPTH*HGGKER
Trigger: CCTTTCCTTCCCGCCGTGCAAGTGTGTCGGCCCCGT...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp TCAGGCTCTGCCTATTACACTAACCAATGTCTCCAATaGTCCAGGCCCTGCTCGGAGCGGACTAGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: SGSAYYTNQCLQ*SRPCSERTRRL
Trigger: CAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTGGAGACATTGGTTAGTGTAATAGGCAGAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTaGGCTTTAACAGGGGCCTGGCCCTTCCTGTCTTCC +
Preference number: 3 (lower is better)
Translates to: PVFTFEDHQIVP*ALTGAWPFLSS
Trigger: GGAAGACAGGAAGGGCCAGGCCCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CCAATCAGAGCTGGGCTGTATCAAACCAGAGCATGGTaGAGGCAACGGCGTGTGAATTCTGAGGCTAGGGAT +
Preference number: 3 (lower is better)
Translates to: PIRAGLYQTRAW*RQRRVNSEARD
Trigger: ATCCCTAGCCTCAGAATTCACACGCCGTTGCCTCCACCATGCTCTGGTTTGATACAGCCCAGCTCTGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCCTGCCCTGGAGGGATaGGCAATCGAGGGAGTCTCC +
Preference number: 3 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHPALEG*AIEGVS
Trigger: GGAGACTCCCTCGATTGCCAATCCCTCCAGGGCAGG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTGCCACCTCCAAAGTTaGGGTGAGGGGCAGGGGTCT +
Preference number: 3 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIECHLQS*GEGQGS
Trigger: AGACCCCTGCCCCTCACCCAAACTTTGGAGGTGGCA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 72 bp GACACACTTGCACGGCGGGAAGGAAAGGCAGAGAAGTaGCACCGTCAGGGGGAAATGACAGAAAGGAAAATC +
Preference number: 3 (lower is better)
Translates to: DTLARREGKAEK*HRQGEMTERKI
Trigger: GATTTTCCTTTCTGTCATTTCCCCCTGACGGTGTCACTTCTCTGCCTTTCCTTCCCGCCGTGCAAGTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp TATTACACTAACCAATGTCTCCAATGCTCCAGGCCCTaGTCGGAGCGGACTAGAAGGTTGGGGGTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: YYTNQCLQCSRP*SERTRRLGVLL
Trigger: AAGAAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTGGAGACATTGGTTAGTGTAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CCA 72 bp CCCACAAGGATTTTAAAGAACAGCTTCTCCTTCTGGTaGGCTTCCAGGGCTCAGAGGGTCCCACTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: PTRILKNSFSFW*ASRAQRVPLRE
Trigger: TTCTCTGAGTGGGACCCTCTGAGCCCTGGAAGCCCACCAGAAGGAGAAGCTGTTCTTTAAAATCCTTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTTGGCCACCTCCCTTTaGGGACCAGCAATGTACGAG +
Preference number: 3 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGLATSL*GPAMYE
Trigger: CTCGTACATTGCTGGTCCCAAAAGGGAGGTGGCCAA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCAAACCACAGGGGCCCTaGGTCCTGCTCATTCAGAAA +
Preference number: 3 (lower is better)
Translates to: GDQTKTTLHTERREDKPSKPQGP*VLLIQK
Trigger: TTTCTGAATGAGCAGGACCAAGGGCCCCTGTGGTTT...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTTTGAGCTGCTGGCTTaGTTCTCTCAAGTCAGGTCT +
Preference number: 3 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGFELLA*FSQVRS
Trigger: AGACCTGACTTGAGAGAACAAAGCCAGCAGCTCAAA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR-3UTR CAA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCGAAGCAGGGAACACTTaGTCAGGACTAGAAAATATC +
Preference number: 3 (lower is better)
Translates to: GDQTKTTLHTERREDKPSEAGNT*SGLENI
Trigger: GATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTC...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR TCA 72 bp TGTATCAAACCAGAGCATGGTGGAGGCAACGGCGTGTaGATTCTGAGGCTAGGGATAAAAATAACACGTTGG +
Preference number: 3 (lower is better)
Translates to: CIKPEHGGGNGV*ILRLGIKITRW
Trigger: CCAACGTGTTATTTTTATCCCTAGCCTCAGAATTCACACGCCGTTGCCTCCACCATGCTCTGGTTTGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR GCA 72 bp CAAAGTATGGTTTTCTCTATTAAGGCTCAGTTAAGCTaGCTCCTGGGTCAAGTACTCATGAATGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: QSMVFSIKAQLS*LLGQVLMNATA
Trigger: GGCTGTGGCATTCATGAGTACTTGACCCAGGAGGCAGCTTAACTGAGCCTTAATAGAGAAAACCATACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTCCCCCGCCAGGCACCTaGCCCATCCGCCAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRPPPGT*PIRQRQ
Trigger: TTGGCGCTGGCGGATGGGGCAGGTGCCTGGCGGGGG...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTGGGGTGCAGAAGGCATaGCCCACGCCACAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRGVQKA*PTPQRA
Trigger: AGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCC...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACCCACGGAGCGGGCTTaGACAGGGACCACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGPTERA*TGTTPA
Trigger: TGCAGGGGTGGTCCCTGTTCAAGCCCGCTCCGTGGG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAGTGGGCAGTGCCCCTTaGAGGAGGGCGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGVGSAP*RRAVLE
Trigger: CTCCAGGACCGCCCTCCTTCAAGGGGCACTGCCCAC...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTCTGAGGGGGCCACGCTaGCCTCCACTCCGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRLRGPR*PPLRGN
Trigger: GTTCCCTCGGAGTGGAGGCCAGCGTGGCCCCCTCAG...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CAA 72 bp GGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATaGGCAATCGAGGGAGTCTCCCACAGAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GEALAWAPALEG*AIEGVSHRGPF
Trigger: GAAGGGGCCTCTGTGGGAGACTCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CAA 72 bp GGCAGTCTTGCTGGGAGTCGGGCCCAGGCCCTGTGGTaGGCAGGCGAGGTACAGGGGGAGTCTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSLAGSRAQALW*AGEVQGESGSF
Trigger: GAAGGACCCAGACTCCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCGACTCCCAGCAAGACTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACCCAGGTCTTCAGGGTaGGGCTGCTGGCGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSPRSSG*GCWRGQ
Trigger: CTGCCCTCGCCAGCAGCCTCACCCTGAAGACCTGGG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACCCTGGCTACGCTGCTaGTTCCGGAGGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGPWLRC*FRRPHW
Trigger: CCAGTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTGGTACAGGGGGAGTCTaGGTCCTTCCCAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRGTGGV*VLPSSG
Trigger: CCCCGAGCTGGGAAGGACCCAGACTCCCCCTGTACC...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAGCAGACGGTGCGGGGTaGAGGCCATCACGCCCATAC +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGADGAG*RPSRPY
Trigger: GTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGC...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACCCCACCCTCTCCCCTaGAGCCAGGGTCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGPHPLP*SQGLHS
Trigger: CGAATGCAGACCCTGGCTCCAGGGGAGAGGGTGGGG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTAGCAGCCAAGGGCTCTaGGATCTGGGCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRSSQGL*DLGHDA
Trigger: GGCATCGTGGCCCAGATCTCAGAGCCCTTGGCTGCT...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAATGCATGCCTCGGGCTaGGGACAGTGGTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGMHASG*GQWCGQ
Trigger: CTGCCCACACCACTGTCCTCAGCCCGAGGCATGCAT...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTATCTGCCCCTGGCCGTaGGTGAGGCCGGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRICPWP*VRPDEK
Trigger: CTTCTCATCCGGCCTCACCCACGGCCAGGGGCAGAT...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACTGTCCACCTCCCCATaGCCCTCGGGTTCCCTCACC +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSLSTSP*PSGSLT
Trigger: GGTGAGGGAACCCGAGGGCCATGGGGAGGTGGACAG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACAGCCCTGCCCCACTTaGCCACCTCCCTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGQPCPT*PPPFWD
Trigger: GTCCCAAAAGGGAGGTGGCCAAGTGGGGCAGGGCTG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACCTCCAAGTGGGGTCTaGGGCCTGGAGAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSPPSGV*GLERPS
Trigger: GGAGGGTCTCTCCAGGCCCCAGACCCCACTTGGAGG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCCTGCCCCCACTACGATaGTGGGGGCTCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCLPPLR*WGLWAG
Trigger: CCCTGCCCAGAGCCCCCACCATCGTAGTGGGGGCAG...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTACGCCAGGTGAGGGTTaGAGGGGGTTGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRTPGEG*RGLWAG
Trigger: TCCTGCCCACAACCCCCTCCAACCCTCACCTGGCGT...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACGGATGGAGCCCCTCTaGGAAACACATGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGRMEPL*ETHAPP
Trigger: TGGAGGGGCATGTGTTTCTCAGAGGGGCTCCATCCG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACTCCCACTGGTACTCTaGGTGCAGCAAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGLPLVL*VQQGER
Trigger: CCTCTCCCCTTGCTGCACTCAGAGTACCAGTGGGAG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCCACCTGGGGAAGGACTaGGGCCTCCTGCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCHLGKD*GLLPTA
Trigger: GGCTGTAGGCAGGAGGCCTCAGTCCTTCCCCAGGTG...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACTTGGCGTGGGCCCCTaGCCTGGAGGGATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSLGVGP*PGGIGN
Trigger: ATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCCGGGGCCGACACACTTaGACGGCGGGAAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCRGRHT*TAGRKG
Trigger: GCCTTTCCTTCCCGCCGTGCAAGTGTGTCGGCCCCG...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGTGTATGGCAGACGGTaGGGGGTGGAGGCCATCACG +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSVYGRR*GVEAIT
Trigger: CGTGATGGCCTCCACCCCGCACCGTCTGCCATACAC...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTAGGACTGAGGCCTCCTaGCTACAGCCAGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRRTEAS*LQPGLT
Trigger: AGTGAGGCCTGGCTGTAGGCAGGAGGCCTCAGTCCT...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACTCCAGGAGCTCAAGTaGCAGCCCCAGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSLQELK*QPQGHL
Trigger: CAGGTGACCCTGGGGCTGCCACTTGAGCTCCTGGAG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGTGGGTTGGCCCACCTaGGGAAGGACTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCVGWPT*GRTEAS
Trigger: GGAGGCCTCAGTCCTTCCCCAGGTGGGCCAACCCAC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAGAACCAGCCCTGAGCTaGTGGAAGCAGAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGEPALS*WKQRPV
Trigger: CACTGGTCTCTGCTTCCATCAGCTCAGGGCTGGTTC...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACGAGGGAACCAGCCCTaGGCTGATGGAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSRGNQP*ADGSRD
Trigger: GTCTCTGCTTCCATCAGCTCAGGGCTGGTTCCCTCG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCCGGGCACGCCAGGTaGGGGTTGGAGGGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTPGHAR*GLEGVV
Trigger: CACAACCCCCTCCAACCCTCACCTGGCGTGCCCGGG...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACCACGGCTAACCCCATaGCTCCTGGACATGACCACT +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGPRLTP*LLDMTT
Trigger: AGTGGTCATGTCCAGGAGGCATGGGGTTAGCCGTGG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCCAGTGGTGTGGGCAGTaGCCCTTGAAGGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCQWCGQ*PLKEGG
Trigger: ACCGCCCTCCTTCAAGGGGCACTGCCCACACCACTG...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGATCCAGCTCAGATGCATaGCTCGGGCTGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGSSSDA*LGLRTV
Trigger: CACTGTCCTCAGCCCGAGGCATGCATCTGAGCTGGA...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTGACCTGAACTTGGCCTaGTGTTCACCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRDLNLA*CSPCHL
Trigger: GAGGTGGCAGGGTGAACAGCAGGCCAAGTTCAGGTC...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTCAGACGGCCCCTGCCTaGGAAAAACCACACTCACAC +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRQTAPA*EKPHSH
Trigger: GTGTGAGTGTGGTTTTTCCCAGGCAGGGGCCGTCTG...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACCCGCCTCTGAATCTTaGGGAGGGGAAGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSPASES*GGEATR
Trigger: CCTGGTAGCTTCCCCTCCCCAAGATTCAGAGGCGGG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAGGGGCCAGTGGGAGGTaGCCTGTGTTCACCTTTGAA +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGGASGR*PVFTFE
Trigger: TTCAAAGGTGAACACAGGCCACCTCCCACTGGCCCC...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTTATCCCTGGAAAATGTaGCCAGGAGGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRYPWKM*PGGGGQ
Trigger: CTGGCCCCCTCCTCCTGGCCACATTTTCCAGGGATA...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCATGTCCCTGGATGCCATaGCTCAGGCCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSCPWMP*LRPQAP
Trigger: AGGAGCCTGAGGCCTGAGCCATGGCATCCAGGGACA...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACCCATATCTCAGGTGTaGGCTCTGCACACGTGCACG +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGPISQV*ALHTCT
Trigger: CGTGCACGTGTGCAGAGCCCACACCTGAGATATGGG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTAGATCTTGGGAGCGATaGAACGCCGCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRRSWER*NAAAAA
Trigger: AGCAGCAGCAGCGGCGTTCCATCGCTCCCAAGATCT...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTGGAAAGGCAGAGAAGTaGCACCGTCAGGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRGKAEK*HRQGEM
Trigger: CATTTCCCCCTGACGGTGTCACTTCTCTGCCTTTCC...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACTCTCAAGTCAGGTCTaGGGGAACCCATCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGLSSQV*GNPSAS
Trigger: AGAAGCCGATGGGTTCCCTCAGACCTGACTTGAGAG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTTGGAGGTTGCTGCAGTaGGCTGAGATCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRWRLLQ*AEIMPQ
Trigger: CTGTGGCATGATCTCAGCTCACTGCAGCAACCTCCA...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACAAGCCTCCTCCTGCTaGACAAATGTCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGQASSC*TNVTLA
Trigger: AGCCAGGGTGACATTTGTTCAGCAGGAGGAGGCTTG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAAGGATGGGATGCCTTTaGAGAGTCAGCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSRMGCL*RVSTGS
Trigger: GCTGCCCGTGCTGACTCTTCAAAGGCATCCCATCCT...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTCGGGGAGTCCTATGCTaGTCTAGTTGTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRRGVLC*SSCLLG
Trigger: CCCCAACAGACAACTAGACCAGCATAGGACTCCCCG...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACCATGCAACTGCGGATaGAGCCCCTCTGAGAAACAC +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGPCNCG*SPSEKH
Trigger: GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCTTCCCACCAGCAGCCTaGTGCCTGGAGGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCFPPAA*CLEVRG
Trigger: TCCTCTCACCTCCAGGCACCAGGCTGCTGGTGGGAA...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTCCCCCTCCCTCAGCATaGTACCCAAAGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRPPPSA*YPKPMS
Trigger: AGACATTGGCTTTGGGTACCATGCTGAGGGAGGGGG...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGAAGGGAAACCGCACTaGCCTTGGCCTGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSEGKPH*PWPVLG
Trigger: TCCCAAGACAGGCCAAGGCCAGTGCGGTTTCCCTTC...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCGATGGTGGGGGCTCTaGGCAGGGCAGAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGRWWGL*AGQRPL
Trigger: GAGGGGCCTCTGCCCTGCCCAGAGCCCCCACCATCG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAACATGCTTTTCTCCATaGCACGAGGCCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSTCFSP*HEASPQ
Trigger: CTGGGGACTGGCCTCGTGTCATGGAGAAAAGCATGT...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAAGATCTGGGCCACGATaGCACACTCATCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGRSGPR*HTHQTP
Trigger: TGGGGTTTGATGAGTGTGGCATCGTGGCCCAGATCT...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCTGCCTGCGTAAAAAGTaGCACCCACGGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCCLRKK*HPRRQD
Trigger: GTCCTGCCTCCGTGGGTGGCACTTTTTACGCAGGCA...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGGAGTTCCATGCAACTaGGGATGGAGCCCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCGVPCN*GWSPSE
Trigger: CTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTTCCTTCAGCTCCCACTaGTACTCTGAGTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRSFSSH*YSECSK
Trigger: CTTGCTGCACTCAGAGTACCAGTGGGAGCTGAAGGA...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAGGCTGGGAAAAGCCCTaGTTGTCACCACATCCAGAT +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGGWEKP*LSPHPD
Trigger: ATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGCC...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CAA 72 bp CAATGCTCCAGGCCCTGCTCGGAGCGGACTAGAAGGTaGGGGGTGCTTCTTCCCATCCCCATGCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: QCSRPCSERTRR*GVLLPIPMQSA
Trigger: AGCGCTTTGCATGGGGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGGGGCCCAGGCTCCTGTaGCATCTCCCGATTCCCACT +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTGPRLL*HLPIPT
Trigger: AGTGGGAATCGGGAGATGTCACAGGAGCCTGGGCCC...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGTTGCTGCAGTGAGCTaGGATCATGCCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCVAAVS*DHATAL
Trigger: GAGTGCTGTGGCATGATCTCAGCTCACTGCAGCAAC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGACCTTCTTCCAGAATaGGCCCCAGTAGATGAGGGA +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSDLLPE*APVDEG
Trigger: TCCCTCATCTACTGGGGCTCATTCTGGAAGAAGGTC...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCCCCAAGGACTGAGTaGTTGTGGGGGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTPPRTE*LWGRVW
Trigger: CCAGACCCTCCCCCACAAGCACTCAGTCCTTGGGGG...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACCAGGAAGTGGAGGTTaGTGCAGTGAGCTGAGATCA +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSPGSGG*CSELRS
Trigger: TGATCTCAGCTCACTGCAGCAACCTCCACTTCCTGG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGCCTGCTGTTCACCCTaGCACCTCCAAAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCACCSP*HLQSLG
Trigger: ACCCAAACTTTGGAGGTGGCAGGGTGAACAGCAGGC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGATGTGCCCGCGTGTATaGCAGACGGTGCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQMCPRV*QTVRGG
Trigger: TCCACCCCGCACCGTCTGCCATACACGCGGGCACAT...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCTCCTGGAGATGCCCATaGAGGAAGGAGGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCSWRCP*RKEVQS
Trigger: ACTCTGCACCTCCTTCCTCCATGGGCATCTCCAGGA...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGAGCAGCCCTGTGGGTTaGCCCACCTGGGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTSSPVG*PTWGRT
Trigger: AGTCCTTCCCCAGGTGGGCCAACCCACAGGGCTGCT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGGTTGGAGGGGGTTGTaGGCAGGAAGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGGWRGL*AGSPLP
Trigger: GGGCAGGGGACTTCCTGCCCACAACCCCCTCCAACC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGACCTGGGTTCCTGTCTaGGCCTCACCAGCCCCGATG +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGTWVPV*ASPAPM
Trigger: CATCGGGGCTGGTGAGGCTCAGACAGGAACCCAGGT...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGACAGGCCCACTCCTCTaGTTACCTCCGGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTTGPLL*LPPGDG
Trigger: TCCATCCCCCGGAGGTAATCAGAGGAGTGGGCCTGT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGAGCCCGGCCTCCTTTaGATGGGCCCCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGEPGLL*MGPHQA
Trigger: GGCCTGGTGGGGGCCCATTCAAAGGAGGCCGGGCTC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCGGCATGGAGAGGCCTTaGCGTGGGCCCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSGMERP*RGPLPW
Trigger: CCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATGCC...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGTCTTGGCAGTCTTGCTaGGAGTCGGGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGSWQSC*ESGPGP
Trigger: AGGGCCTGGGCCCGACTCCCAGCAAGACTGCCAAGA...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCACGTTGGCTTTTACCCTaGGCCCTTGAATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSRWLLP*ALESLA
Trigger: AGCAAGAGATTCAAGGGCCCAGGGTAAAAGCCAACG...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCCCTGCAAGGTGACATaGCAGCTGGCACACCGGTGT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGPCKVT*QLAHRC
Trigger: ACACCGGTGTGCCAGCTGTCATGTCACCTTGCAGGG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCCTCACCAGCCCCGATaGCCTGAGGGGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEPHQPR*PEGATL
Trigger: CAGCGTGGCCCCCTCAGGTCATCGGGGCTGGTGAGG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCCTACTGGGGGAAGCTaGGGCTCTACCTGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGPTGGS*GSTCPS
Trigger: ACTTGGGCAGGTAGAGCCTCAGCTTCCCCCAGTAGG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGTTAGGACGACGGGCTaGGGGAGGAAGGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGVRTTG*GRKGCL
Trigger: AAGACACCCCTTCCTCCCTCAGCCCGTCGTCCTAAC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGCCTGTGTTCACCTTTaGAGATCACCAAATAGTGCC +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSACVHL*RSPNSA
Trigger: GGCACTATTTGGTGATCTTCAAAGGTGAACACAGGC...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCTTACTAGGAAACCTCTaGTGCGTCTGCACGTCCATC +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCLLGNL*CVCTSI
Trigger: GATGGACGTGCAGACGCAGCAGAGGTTTCCTAGTAA...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGCTTCCCTCGGCATCTaGCCCTGGCCGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAASLGI*PWPWVR
Trigger: CCTCACCCACGGCCAGGGGCAGATGCCGAGGGAAGC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCAAGGCTCAGTTAAGCTaGCTCCTGGGTCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCKAQLS*LLGQVL
Trigger: GAGTACTTGACCCAGGAGGCAGCTTAACTGAGCCTT...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCACTGGTACTCTGAGTaGAGCAAGGGGAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQHWYSE*SKGRGW
Trigger: CCACCCTCTCCCCTTGCTGCACTCAGAGTACCAGTG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCCTCTCCAGCTCAGATaGATGCCTCGGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGPLQLR*MPRAED
Trigger: GTCCTCAGCCCGAGGCATGCATCTGAGCTGGAGAGG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCAATGCTCCAGGCCCTaGTCGGAGCGGACTAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGQCSRP*SERTRR
Trigger: CCTTCTAGTCCGCTCCGAGCAGGGCCTGGAGCATTG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAACATGCACAAACGTGTaGATAAACACACCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: HGEALAWAPALEGLAIEGTCTNV*INTPRP
Trigger: AGGCCTAGGTGTGTTTATGCACACGTTTGTGCATGT...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGTGGATGACTGGCCTCTaGACCAGCTTGGGCTTCACG +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQWMTGL*TSLGFT
Trigger: CGTGAAGCCCAAGCTGGTCCAGAGGCCAGTCATCCA...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGGAGAAGAAGCGGATGTaGCCGCAGTCATCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTEKKRM*PQSSPV
Trigger: CACTGGGGATGACTGCGGCCACATCCGCTTCTTCTC...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCCAGGCCCTGTGGTTaGCAGGCGAGGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPRPCG*QARYRG
Trigger: CCCCCTGTACCTCGCCTGCCAACCACAGGGCCTGGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACGGGCCCAGGCCCTGTaGTTGGCAGGCGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSARAQAL*LAGEVQ
Trigger: CTGTACCTCGCCTGCCAACCACAGGGCCTGGGCCCG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCAGAAAGAGGAGGGCTTaGGACTGTTATCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCRKRRA*DCYQLP
Trigger: AGGGAGCTGATAACAGTCCCAAGCCCTCCTCTTTCT...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCCCCACTACGATGGTaGGGGCTCTGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPPLRW*GLWAGQ
Trigger: CTGCCCTGCCCAGAGCCCCCACCATCGTAGTGGGGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCATCGGGGACAAGTGCATaGTCAAACTTGAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSSGTSA*SNLKVL
Trigger: CAGTACTTTCAAGTTTGATCATGCACTTGTCCCCGA...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGAGCCGCGTGTGGTGGTaGGTGCCTGTAATCTCACCT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGSRVWW*VPVISP
Trigger: AGGTGAGATTACAGGCACTCACCACCACACGCGGCT...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGGTGGGCGGATCACCTaGGGTCAGGAGTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGGGRIT*GQEFKN
Trigger: GTTCTTGAACTCCTGACCTCAGGTGATCCGCCCACC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCCTCCAAAGTTTGGGTaGGGGGCAGGGGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGPPKFG*GAGVSN
Trigger: ATTGGAGACCCCTGCCCCTCACCCAAACTTTGGAGG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGAACCTCTGCTGCGTCTaGACGTCCATCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGNLCCV*TSITRE
Trigger: CTCCCTGGTGATGGACGTGCAGACGCAGCAGAGGTT...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCTAGGAAACCTCTGCTaGGTCTGCACGTCCATCACC +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQLGNLC*VCTSIT
Trigger: GGTGATGGACGTGCAGACGCAGCAGAGGTTTCCTAG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGGGGACAGGAGCTGGTaGTCCAGGCTGGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGGDRSW*SRLVGL
Trigger: GAGACCCACCAGCCTGGAGCACCAGCTCCTGTCCCC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCTCACCCCCTCCGGTaGTCAGATAGAACTACAGCT +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTPHPLR*SDRTTA
Trigger: AGCTGTAGTTCTATCTGAGCACCGGAGGGGGTGAGG...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGAGCCCCAGGGTCACCTaGTCACCCCTAGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTSPRVT*SPLEIP
Trigger: TGGAATTTCTAGGGGTGAGCAGGTGACCCTGGGGCT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCGGGCAGGAAGTCCCCTaGCCCCACTACGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSGQEVP*PHYDGG
Trigger: CCCACCATCGTAGTGGGGGCAGGGGACTTCCTGCCC...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACGTGGGCCCCTGCCCTaGAGGGATTGGCAATCGAGG +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSARGPLP*RDWQSR
Trigger: CCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACGGAGAGGCCTTGGCGTaGGCCCCTGCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHGEALA*APALEG
Trigger: TCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCC...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCTCGGCATCTGCCCCTaGCCGTGGGTGAGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIELGICP*PWVRPD
Trigger: ATCCGGCCTCACCCACGGCCAGGGGCAGATGCCGAG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGGGGACACACGACTCTaGGGTCACGGGGCCGACACA +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGGDTRL*GHGADT
Trigger: TGTGTCGGCCCCGTGACCCCAGAGTCGTGTGTCCCC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCCCAGGGATCTTGCCTaGGGAAAGTGGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGPRDLA*GKWGAE
Trigger: TTCTGCACCCCACTTTCCCCAGGCAAGATCCCTGGG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCACCAAATAGTGCCCTaGGCTTTAACAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQHQIVP*ALTGAW
Trigger: CCAGGCCCCTGTTAAAGCCCAGGGCACTATTTGGTG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGAAACCGCACTGGCCTTaGCCTGTCTTGGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTKPHWP*PVLGPE
Trigger: TTCAGGTCCCAAGACAGGCCAAGGCCAGTGCGGTTT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACATGCCTCCTGGACATaGCCACTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAHASWT*PLSWPA
Trigger: GGCAGGCCAGCTGAGTGGTCATGTCCAGGAGGCATG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCGCCAGTGGTTTGGAGTaGGGCTTTGGGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSASGLE*GFGSPP
Trigger: AGGCGGGGACCCAAAGCCTCACTCCAAACCACTGGC...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCCCTCTTGGCAGTCTTaGTGGGAGTCGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEPSWQS*WESGPG
Trigger: GCCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCACCACTCAGCTGGCCTaGCACCTGGCTGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSTTQLA*HLAVHL
Trigger: GAGGTGGACAGCCAGGTGGCAGGCCAGCTGAGTGGT...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGGGCGCCCAGGGATCTTaGCTGGGGAAAGTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGAGAQGS*LGKVGC
Trigger: GCACCCCACTTTCCCCAGGCAAGATCCCTGGGCGCC...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGCAATGCCCAGATCTTTaGTGGGTTAGGACGACGGGC +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGQCPDL*WVRTTG
Trigger: GCCCGTCGTCCTAACCCAGCAAAGATCTGGGCATTG...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCACCCCGAAGAGCTGTaGAGACCAAACCAAGACTAC +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQHPEEL*RPNQDY
Trigger: GTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCACATGCCCCTCCAAGTaGGGTCTGGGGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSTCPSK*GLGPGE
Trigger: CTCTCCAGGCCCCAGACCCCACTTGGAGGGGCATGT...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGAGAATGCCAGTGGTTTaGAGTGAGGCTTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTRMPVV*SEALGP
Trigger: GGGACCCAAAGCCTCACTCCAAACCACTGGCATTCT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGGTGGGTGAGGCCGGATaGGAAGGCGGATCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEVGEAG*EGGSAH
Trigger: GTGAGCTGATCCGCCTTCTCATCCGGCCTCACCCAC...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCTGGTGCCTGGAGGTaGGAGGAGGTGAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPGAWR*EEVRMP
Trigger: TGGCATTCTCACCTCCTCTCACCTCCAGGCACCAGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGAGTTCCCATGTGGGGTaGCAGCGGCTCCAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGSSHVG*QRLQRL
Trigger: AAGACGCTGGAGCCGCTGGCACCCCACATGGGAACT...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGAGGGCAGACGGCCCCTaGCTGGGAAAAACCACACTC +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGRADGP*LGKTTL
Trigger: GAGTGTGGTTTTTCCCAGGCAGGGGCCGTCTGCCCT...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGTTCTTCCCATCCCCATaGAAAGCGCTTCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQFFPSP*KALHSG
Trigger: TCCTGAGTGAAGCGCTTTGCATGGGGATGGGAAGAA...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGCACACAGGCCACCCTaGACTTCCAATTTCCATAGC +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGAHRPP*TSNFHS
Trigger: GCTATGGAAATTGGAAGTGCAGGGTGGCCTGTGTGC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACGCAGTCATCCCCAGTaGCCATGGGGTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSARSHPQ*PWGPSL
Trigger: GAGTGAAGGACCCCATGGCCACTGGGGATGACTGCG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCCTGCCCTGGAGGGATTaGCAATCGAGGGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSLPWRD*QSRESP
Trigger: GGGAGACTCCCTCGATTGCCAATCCCTCCAGGGCAG...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGAAGAAACCTCAGGCCTaGAAAGCCAGGGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGKKPQA*KARDVP
Trigger: AGGGACATCCCTGGCTTTCCAGGCCTGAGGTTTCTT...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCGTCAAAAATCCCATTaGCCAGGCGGGGTATCTCAT +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQRQKSH*PGGVSH
Trigger: ATGAGATACCCCGCCTGGCCAATGGGATTTTTGACG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTGGGTCAAGTACTCATaGATGCCACAGCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGWVKYS*MPQPPA
Trigger: GGCTGGGGGCTGTGGCATTCATGAGTACTTGACCCA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGACAGGCTCTTTGAGCTaGTGGCTTTGTTCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PHPEELWRPNQDYATHRTTGSLS*WLCSLK
Trigger: CTTGAGAGAACAAAGCCAGCAGCTCAAAGAGCCTGT...CGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGGGGAGGGGTGGTCACTaGTCTGTTCCTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEGRGGH*SVPPHP
Trigger: AGGATGGGGAGGAACAGAGCAGTGACCACCCCTCCC...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACGGGCGGTCCTGGAGATaGCCATGGAGGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHGRSWR*PWRKEV
Trigger: CACCTCCTTCCTCCATGGGCATCTCCAGGACCGCCC...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACTCACCCTGGCTACGCTaGTGCTTCCGGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHSPWLR*CFRRPH
Trigger: GTGTGGCCTCCGGAAGCAGCAGCGTAGCCAGGGTGA...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGGGCTGAGGTGCTCTTaGCCTAAAGCCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAGLRCS*PKAPSL
Trigger: AAGAGAGGGGGCTTTAGGGCAAGAGCACCTCAGCCC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGATTGCAGGGCTGAGGTaGTCTTGCCCTAAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGIAGLR*SCPKAP
Trigger: GGGGGCTTTAGGGCAAGAGCACCTCAGCCCTGCAAT...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACATCCCCAGTGGCCATaGGGTCCTTCACTCCATTGG +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAHPQWP*GPSLHW
Trigger: CCAATGGAGTGAAGGACCCCATGGCCACTGGGGATG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACTTGTGGGGGAGGGTCTaGACAGGGCCCTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHLWGRV*TGPSWQ
Trigger: CTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAA...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGAGGACTGAGTGCTTGTaGGGGAGGGTCTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGARTECL*GRVWTG
Trigger: CCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACAGGGATGTCCCTACTaGGGGAAGCTGAGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAQGCPY*GKLRLY
Trigger: GTAGAGCCTCAGCTTCCCCCAGTAGGGACATCCCTG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGCTTTAACAGGGGCCTaGCCCTTCCTGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAALTGA*PFLSSQ
Trigger: CTGGGAAGACAGGAAGGGCCAGGCCCCTGTTAAAGC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGGCTTCACTCAGGAAGTaGCGTCAAAAATCCCATTGG +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQASLRK*RQKSHW
Trigger: CCAATGGGATTTTTGACGCCACTTCCTGAGTGAAGC...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCTTCACCCAGATCTTaGGAGCGATGGAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPSPRS*ERWNAA
Trigger: AGCGGCGTTCCATCGCTCCCAAGATCTGGGTGAAGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGGGAAGCAGAGACCAGTaGCCACAGTACTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGAGSRDQ*PQYSPP
Trigger: TGGGGGTGAGTACTGTGGTCACTGGTCTCTGCTTCC...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGGCCTGTCTTGGGACCTaGACTTGGCCTGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEACLGT*TWPAVH
Trigger: GTGAACAGCAGGCCAAGTTCAGGTCCCAAGACAGGC...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCCGGCGGGGAGTCCTATaGTGGTCTAGTTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSRRGVL*WSSCLL
Trigger: CAACAGACAACTAGACCAGCATAGGACTCCCCGCCG...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCGAGATCGCACCACTaGACTCCAGCCTGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPRSHH*TPACLK
Trigger: TTTGAGACAGGCTGGAGTGCAGTGGTGCGATCTCGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCTCAGGTGTGGGCTCTaGACACGTGCACGCACACAC +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHLRCGL*TRARTH
Trigger: GTGTGTGCGTGCACGTGTGCAGAGCCCACACCTGAG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAAAGGGCTCTGAGATCTaGGCCACGATGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAKGSEI*ATMPHS
Trigger: TGAGTGTGGCATCGTGGCCCAGATCTCAGAGCCCTT...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAACTAGCCAGACGTGGTaGTGCGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSATSQTW*CVPVIP
Trigger: TGGGATTACAGGCACGCACCACCACGTCTGGCTAGT...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGGCAGAACTTATCAGTaGCAGGGAGGGGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGGRTYQ*QGGVVT
Trigger: AGTGACCACCCCTCCCTGCCACTGATAAGTTCTGCC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCAGCGGACTAGAAGGTTaGGGGTGCTTCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSSGLEG*GCFFPS
Trigger: GGATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCT...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGAGATGTAGCCCTCGATaGGGGAGAAGGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGRCSPR*GRRRRS
Trigger: GCTTCTTCTCCTTCTCCCTCATCGAGGGCTACATCT...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGGGAGAGGGTGGGGTTaGGACTATCTGAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAGRGWG*DYLSFS
Trigger: AGAAAAGCTCAGATAGTCTCAACCCCACCCTCTCCC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCGGCAGGAGAATCACTTaGACCTGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSGRRIT*TWEAEV
Trigger: AACCTCTGCTTCCCAGGTTCAAGTGATTCTCCTGCC...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGCCAACATACAGTACATaGATCTCGAGGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQPTYST*ISRVLC
Trigger: ACACAAAACCCTCGAGATTCATGTACTGTATGTTGG...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCCCAGAGCTCTCCGGATaGGCTTGTGAACAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSPELSG*ACEQQV
Trigger: AACTTGCTGTTCACAAGCGCATCCGGAGAGCTCTGG...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTCAAGTACTCATGAATaGCACAGCCCCCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGSSTHE*HSPQPR
Trigger: CCTTGGCTGGGGGCTGTGGCATTCATGAGTACTTGA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGAGTGAGCTGAGATCATaGCACAGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESELRS*HSTPAW
Trigger: CCAGGCTGGAGTGCTGTGGCATGATCTCAGCTCACT...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCTAGAAGGTTGGGGGTaGTTCTTCCCATCCCCATGC +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIELEGWG*FFPSPC
Trigger: GCATGGGGATGGGAAGAAGCACCCCCAACCTTCTAG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCCTTGGTCTCCCAAAGTaGTGGGATGACAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSLGLPK*WDDRPK
Trigger: CTTAGGCCTGTCATCCCAGCACTTTGGGAGACCAAG...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGAGCTCACAAGCTCCCTaGGCCTCCGAAAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGSSQAP*ASESIF
Trigger: GAAAATGCTTTCGGAGGCCCAGGGAGCTTGTGAGCT...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACAGCTTCTCCTTCTGGTaGGCTTCCAGGGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHSFSFW*ASRAQR
Trigger: CCTCTGAGCCCTGGAAGCCCACCAGAAGGAGAAGCT...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCTGGCCACCTCCCTTTTaGGACCAGCAATGTACGAGT +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSWPPPF*DQQCTS
Trigger: ACTCGTACATTGCTGGTCCCAAAAGGGAGGTGGCCA...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCTTGCCTGGGGAAAGTaGGGTGCAGAAGGCATGACC +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHLAWGK*GAEGMT
Trigger: GGTCATGCCTTCTGCACCCCACTTTCCCCAGGCAAG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTTTGGAGTGAGGCTTTaGGTCCCCGCCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGFGVRL*VPASES
Trigger: AGATTCAGAGGCGGGGACCCAAAGCCTCACTCCAAA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGGAACAAATGTCACCCTaGCTACGCTGCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEEQMSP*LRCCFR
Trigger: CCGGAAGCAGCAGCGTAGCCAGGGTGACATTTGTTC...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGTCCCCAGGGTATCCCTaGAAAATGTGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGASPGYP*KMWPGG
Trigger: TCCTCCTGGCCACATTTTCCAGGGATACCCTGGGGA...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTCTCTTAGCTGGGGCTaGGAAAAGCCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGSLSWG*EKPWLS
Trigger: TGACAACCAGGGCTTTTCCCAGCCCCAGCTAAGAGA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCCAAACCAGAGCATGGTaGAGGCAACGGCGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSQTRAW*RQRRVN
Trigger: ATTCACACGCCGTTGCCTCCACCATGCTCTGGTTTG...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
3UTR CAA 72 bp GCTCAGAGGGTCCCACTCAGAGAAGCAGGGAACACTTaGTCAGGACTAGAAAATATCCCTTCTCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: AQRVPLREAGNT*SGLENIPSPLT
Trigger: GGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCTCTGAGTGGGACCCTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCACAACAGCAACCTCATaGATGACCCTGAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GDQTKTTLHTERREDKPSTTATS*MTLSQN
Trigger: GTTCTGGCTCAGGGTCATTCATGAGGTTGCTGTTGT...GCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACGGTCTAGTTGTCTGTTaGGGAGGTGGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHGLVVC*GGGTPP
Trigger: AGGTGGTGTCCCACCTCCCCAACAGACAACTAGACC...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGATTAAAAATATATGGTaGCTCAAATGTGCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQIKNIW*LKCARV
Trigger: CACGCGGGCACATTTGAGCCACCATATATTTTTAAT...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCAGCTGGCTTCCTTCCCTaGGGCCTCTTTCGTTATTTT +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSAAGFLP*GLFRYF
Trigger: AAAATAACGAAAGAGGCCCCAGGGAAGGAAGCCAGC...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGAGTAGTTCTGACAAGTaGGGTGAGGCCGTCCTACCA +
Preference number: 4 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESSSDK*GEAVLP
Trigger: TGGTAGGACGGCCTCACCCCACTTGTCAGAACTACT...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCTTCTAGTGCTTCTCTaGTTGGCTGACCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHLLVLL*LADLQG
Trigger: GCCCTGAAGGTCAGCCAAGCAGAGAAGCACTAGAAG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGTCTGCATTCGAGTCCTaGCCTCACTCACCTAATCAT +
Preference number: 4 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGSAFES*PHSPNH
Trigger: ATGATTAGGTGAGTGAGGGCAGGACTCGAATGCAGA...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGTCTGTAGAGAAATACTaGAAGATCAATCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGSVEKY*KINLQG
Trigger: ACCCTGAAGATTGATCTTGCAGTATTTCTCTACAGA...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGGGAAAATCAAGGCCTTaGAAGGTCAGAAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGAGKSRP*KVRKGT
Trigger: AGTCCCCTTTCTGACCTTGCAAGGCCTTGATTTTCC...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACGTGCAGAGTCAGCAATaGCCAGATCTTTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHVQSQQ*PDLCWV
Trigger: AACCCAGCAAAGATCTGGGCATTGCTGACTCTGCAC...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACAGTTCAAGACCAGCCTaGGCAATGTTACGAAATCCC +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHSSRPA*AMLRNP
Trigger: GGGATTTCGTAACATTGCTCAGGCTGGTCTTGAACT...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GAGAACTCAAAATACTCCAAGAGCCAGTCCCATATCTCAGGTGTGGGCTCTGCACTCTTCGGGGACAAGTaGATGATCAAACTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: ENSKYSKSQSHISGVGSALFGDK*MIKLES
Trigger: ACTTTCAAGTTTGATCATGCACTTGTCCCCGAAGAG...TGCAGAGCCCACACCTGAGATATGGGACTGGCTCTTGGAGTATTTTGAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR GCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGACGCTCACAGGTACATaGACAAACGTGTGCATAAAC +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGATLTGT*TNVCIN
Trigger: GTTTATGCACACGTTTGTGCATGTACCTGTGAGCGT...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACACACCATCTGCAGGATaGGATGCCTTTGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHTPSAG*DAFEES
Trigger: TGACTCTTCAAAGGCATCCCATCCTGCAGATGGTGT...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGGGTCTCCAATTCTTCTaGACCTTCTTCCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGAGLQFF*TFFQNE
Trigger: CTCATTCTGGAAGAAGGTCCAGAAGAATTGGAGACC...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR TCA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGCAACAAGACTGCTACTaGGAACTCAAAATACTCCAA +
Preference number: 4 (lower is better)
Translates to: ELKIYGGSNVPACMADGAQQDCY*ELKILQ
Trigger: TTGGAGTATTTTGAGTTCTCAGTAGCAGTCTTGTTG...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTGCCCTCTTGGCAGTCTaGCTGGGAGTCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRALLAV*LGVGPR
Trigger: CCTGGGCCCGACTCCCAGCAAGACTGCCAAGAGGGC...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp TGCCCGCGTGTATGGCAGACGGTGCGGGGTGGAGGCCATCACGCCCATACACGTACGGGGCCGACACACTaGCACGGCGGGAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: CPRVWQTVRGGGHHAHTRTGPTH*HGGKER
Trigger: CCTTTCCTTCCCGCCGTGCAAGTGTGTCGGCCCCGT...ACGTGTATGGGCGTGATGGCCTCCACCCCGCACCGTCTGCCATACACGCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGGGCGCCCAGGGATCTaGCCTGGGGAAAGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSGRPGI*PGESGV
Trigger: CACCCCACTTTCCCCAGGCAAGATCCCTGGGCGCCC...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp TGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCATGTGGGCAGTGCCCCTaGAAGGAGGGCGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CLGKVGCRRHDPRHSGLSCGQCP*KEGGPG
Trigger: TCCAGGACCGCCCTCCTTCAAGGGGCACTGCCCACA...TGAGAGCCCGCTGTGGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGACCTGGGAAGCAGAGGTaGCAGCGAACCGAGATCGCA +
Preference number: 5 (lower is better)
Translates to: HGEALAWAPALEGLAIEGPGKQR*QRTEIA
Trigger: TGCGATCTCGGTTCGCTGCAACCTCTGCTTCCCAGG...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGGGCATGGAGAGGCCTaGGCGTGGGCCCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGGHGEA*AWAPAL
Trigger: CAGGGCAGGGGCCCACGCCAAGGCCTCTCCATGCCC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAGCGTCAAAAATCCCATaGGCCAGGCGGGGTATCTCA +
Preference number: 5 (lower is better)
Translates to: HGEALAWAPALEGLAIEGASKIP*ARRGIS
Trigger: TGAGATACCCCGCCTGGCCAATGGGATTTTTGACGC...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGATGGGAAAAGCCCTGGTaGTCACCACATCCAGATCTC +
Preference number: 5 (lower is better)
Translates to: HGEALAWAPALEGLAIEGWEKPW*SPHPDL
Trigger: GAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCA...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CATGGAGAGGCCTTGGCGTGGGCCCCTGCCCTGGAGGGATTGGCAATCGAGGGAGTTGGTCTTGCTATCTaGGCCTCAAGCTATCCTCCC +
Preference number: 5 (lower is better)
Translates to: HGEALAWAPALEGLAIEGVGLAI*ASSYPP
Trigger: GGGAGGATAGCTTGAGGCCAAGATAGCAAGACCAAC...TCCCTCGATTGCCAATCCCTCCAGGGCAGGGGCCCACGCCAAGGCCTCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGAAGCAGCCCTGTGGGTaGGCCCACCTGGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGKQPCG*AHLGKD
Trigger: GTCCTTCCCCAGGTGGGCCAACCCACAGGGCTGCTT...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp AGGACTGAGTGCTTGTGGGGGAGGGTCTGGACAGGGCCCTCTTGGCAGTCTTGCGTCAGACTGAAGAACTaGCACCTGGTCTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RTECLWGRVWTGPSWQSCVRLKN*HLVLED
Trigger: GTCCTCCAAGACCAGGTGCAAGTTCTTCAGTCTGAC...GCAAGACTGCCAAGAGGGCCCTGTCCAGACCCTCCCCCACAAGCACTCAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS GCA 90 bp GGGCGGCGGCAGGGAGGAGCAGAAGAGACCCTTCTAGTGCTTCTCTaGTTGGCTGACCTTCAGGGCACTGATGACACCATTGATGTTCTC +
Preference number: 5 (lower is better)
Translates to: GRRQGGAEETLLVLL*LADLQGTDDTIDVL
Trigger: GAGAACATCAATGGTGTCATCAGTGCCCTGAAGGTCAGCCAAGCAGAGAAGCACTAGAAGGGTCTCTTCTGCTCCTCCCTGCCGCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGTGGTCTAGTTGTCTGTaGGGGAGGTGGGACACCACC +
Preference number: 5 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQWSSCL*GRWDTT
Trigger: GGTGGTGTCCCACCTCCCCAACAGACAACTAGACCA...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTCCCACGGAGCGGGCTaGAACAGGGACCACCCCTGC +
Preference number: 5 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESHGAG*NRDHPC
Trigger: GCAGGGGTGGTCCCTGTTCAAGCCCGCTCCGTGGGA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCGAGCCCGGCCTCCTTaGAATGGGCCCCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHRARPP*NGPPPG
Trigger: GCCTGGTGGGGGCCCATTCAAAGGAGGCCGGGCTCG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGGAGAAAGAGGAGGGCTaGGGACTGTTATCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQEKEEG*GLLSAP
Trigger: GGGAGCTGATAACAGTCCCAAGCCCTCCTCTTTCTC...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGGCCACGGTCTCGCCATaGACGACCCGCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEATVSP*TTRRMV
Trigger: CACCATCCTGCGGGTCGTCAATGGCGAGACCGTGGC...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGCCTGCCCTGGAGGGATaGGCAATCGAGGGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGPALEG*AIEGVS
Trigger: GGAGACTCCCTCGATTGCCAATCCCTCCAGGGCAGG...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGTTGGCCACCTCCCTTTaGGGACCAGCAATGTACGAG +
Preference number: 5 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGLATSL*GPAMYE
Trigger: CTCGTACATTGCTGGTCCCAAAAGGGAGGTGGCCAA...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGGCCTCTGGACCAGCTaGGGCTTCACGAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGGLWTS*GFTKPL
Trigger: CAATGGCTTCGTGAAGCCCAAGCTGGTCCAGAGGCC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGCTGGACAGGGCCCTCTaGGCAGTCTTGCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIELDRAL*AVLLGV
Trigger: GACTCCCAGCAAGACTGCCAAGAGGGCCCTGTCCAG...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGAAACCACAGGGGCCCTaGGTCCTGCTCATTCAGAAA +
Preference number: 5 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGKPQGP*VLLIQK
Trigger: TTTCTGAATGAGCAGGACCAAGGGCCCCTGTGGTTT...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGAGGAAAATCAAGGCCTaGCAAGGTCAGAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQRKIKA*QGQKGD
Trigger: GTCCCCTTTCTGACCTTGCAAGGCCTTGATTTTCCT...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GCTGGGAAAAGCCCTGGTTGTCACCACATCCAGATCTCTAGGCTCAGAAAGGGGGCACTGATGACACCATaGATGTTCTCTTCGGGGACA +
Preference number: 5 (lower is better)
Translates to: AGKSPGCHHIQISRLRKGALMTP*MFSSGT
Trigger: TGTCCCCGAAGAGAACATCAATGGTGTCATCAGTGC...CCCCTTTCTGAGCCTAGAGATCTGGATGTGGTGACAACCAGGGCTTTTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp TGGCCTGTGTTCACCTTTGAAGATCACCAAATAGTGCCCTGGGCTTTAACAGGGGAGCGGACTAGAAGGTaGGGGGTGCTTCTTCCCATC +
Preference number: 5 (lower is better)
Translates to: WPVFTFEDHQIVPWALTGERTRR*GVLLPI
Trigger: GATGGGAAGAAGCACCCCCAACCTTCTAGTCCGCTC...CCCTGTTAAAGCCCAGGGCACTATTTGGTGATCTTCAAAGGTGAACACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GAATTAAAAATATATGGTGGCTCAAATGTGCCCGCGTGTATGGCAGACGGTGCGTGCCACCTCCAAAGTTaGGGTGAGGGGCAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: ELKIYGGSNVPACMADGACHLQS*GEGQGS
Trigger: AGACCCCTGCCCCTCACCCAAACTTTGGAGGTGGCA...CGCACCGTCTGCCATACACGCGGGCACATTTGAGCCACCATATATTTTTAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACCCCTTCACCCAGATCTaGGGAGCGATGGAACGCCGC +
Preference number: 5 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHPFTQI*GAMERR
Trigger: GCGGCGTTCCATCGCTCCCAAGATCTGGGTGAAGGG...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGAGCCTCCAGGCTCCCTaGACAGAACTCAAACAGGTC +
Preference number: 5 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIESLQAP*TELKQV
Trigger: GACCTGTTTGAGTTCTGTCAAGGGAGCCTGGAGGCT...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp GGTGCTCAGATAGAACTACAGCTGGTTGGTGGGAGTTCCCATGTGGGGTGCCAGGAAGCAGGGAACACTTaGTCAGGACTAGAAAATATC +
Preference number: 5 (lower is better)
Translates to: GAQIELQLVGGSSHVGCQEAGNT*SGLENI
Trigger: GATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTC...CTGGCACCCCACATGGGAACTCCCACCAACCAGCTGTAGTTCTATCTGAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp AGAAGCAGGGAACACTTTGTCAGGACTAGAAAATATCCCTTCTCCTCTGACCACTCTTGGGACCTGAACTaGGCCTGCTGTTCACCCTGC +
Preference number: 5 (lower is better)
Translates to: RSREHFVRTRKYPFSSDHSWDLN*ACCSPC
Trigger: GCAGGGTGAACAGCAGGCCAAGTTCAGGTCCCAAGA...GTGGTCAGAGGAGAAGGGATATTTTCTAGTCCTGACAAAGTGTTCCCTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTTTGAGCTGCTGGCTTaGTTCTCTCAAGTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIEFELLA*FSQVRS
Trigger: AGACCTGACTTGAGAGAACAAAGCCAGCAGCTCAAA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS-3UTR CAA 90 bp CCATCCATCCACTCACCCCCATCTCAGGATAACGGAAATGATTTTGGCATAGAGTGTAATCTCACCTACTaGGGAGGCCAATGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: PSIHSPPSQDNGNDFGIECNLTY*GGQCRR
Trigger: TCTCCTACATTGGCCTCCCAAGTAGGTGAGATTACA...CTCTATGCCAAAATCATTTCCGTTATCCTGAGATGGGGGTGAGTGGATGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS CCA 72 bp AGGAGAAGAAGCGGATGTGGCCGCAGTCATCCCCAGTaGCCATGGGGTCCTTCACTCCATTGGAGTAGAACA +
Preference number: 6 (lower is better)
Translates to: RRRSGCGRSHPQ*PWGPSLHWSRT
Trigger: TGTTCTACTCCAATGGAGTGAAGGACCCCATGGCCACTGGGGATGACTGCGGCCACATCCGCTTCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616305.2
ENST00000622472.1
CDS GCA 72 bp CAGGGAGGAGCAGAAGAGACCCTTCTAGTGCTTCTCTaGTTGGCTGACCTTCAGGGCACTGATGACACCATT +
Preference number: 6 (lower is better)
Translates to: QGGAEETLLVLL*LADLQGTDDTI
Trigger: AATGGTGTCATCAGTGCCCTGAAGGTCAGCCAAGCAGAGAAGCACTAGAAGGGTCTCTTCTGCTCCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616305.2
CDS GCA 72 bp TCCTCCAATCCGGACCATCTTCCAGAGCTCTCCGGATaGGCTTGTGAACAGCAAGTTACTAGGAAACCTCTG +
Preference number: 6 (lower is better)
Translates to: SSNPDHLPELSG*ACEQQVTRKPL
Trigger: CAGAGGTTTCCTAGTAACTTGCTGTTCACAAGCGCATCCGGAGAGCTCTGGAAGATGGTCCGGATTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616305.2
ENST00000622472.1