RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASTOR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000239282

Ensembl transcript IDs: ENST00000404953.7, ENST00000407689.8, ENST00000415484.5, ENST00000421236.5, ENST00000425691.5, ENST00000440704.5, ENST00000440839.5, ENST00000463795.5, ENST00000464854.1, ENST00000471480.6, ENST00000492159.5, ENST00000497605.6, ENST00000498572.1

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCTCAGGAAGCCAGGCCTTCCTGCCGCCGCTGGAGGACCTCGATaGCGCTGCCGATACCGTCCTCGGGCACCAGGGCGTGGTCGAAGT +
Preference number: 1 (lower is better)
Translates to: GLRKPGLPAAAGGPR*RCRYRPRAPGRGRS
Trigger: ACTTCGACCACGCCCTGGTGCCCGAGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTCCTGAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR CCA 90 bp GCACCGTGGGGCTGGGCCCATGCTGAGTGCGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAGGCACAGGCTCTCCGCCCACCTCGC +
Preference number: 1 (lower is better)
Translates to: APWGWAHAECGESHC*NHPSSQAQALRPPR
Trigger: GCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCCCACGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR GCA 90 bp CGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGC +
Preference number: 1 (lower is better)
Translates to: RDDRTGDLGDPSSLH*RTAVRRHVQHQPCG
Trigger: GCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR TCA 90 bp CGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTaGGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGC +
Preference number: 1 (lower is better)
Translates to: RAILVTPAACTAAPL*DDTFSTSHVASATC
Trigger: GCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR GCA 90 bp CCCACTCCACCTGTGAGTGTACACAGGTGTCCGCGTAAAAGCCGGTaGCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCA +
Preference number: 1 (lower is better)
Translates to: PTPPVSVHRCPRKSR*LHAAYIQRAERGSP
Trigger: TGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTTACGCGGACACCTGTGTACACTCACAGGTGGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR CCA 90 bp CCACGATGCCACATTCATCATGCTGAGTGCGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAGGCACAGGCTCTCCGCCCACCTCGC +
Preference number: 1 (lower is better)
Translates to: PRCHIHHAECGESHC*NHPSSQAQALRPPR
Trigger: GCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGATGAATGTGGCATCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR GCA 90 bp GTGCCACGATGCCACATTCATCATGCTGAGTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCACAGGCACAGGCTCTCCGCCCACCT +
Preference number: 1 (lower is better)
Translates to: VPRCHIHHAECGESH*WNHPSSQAQALRPP
Trigger: AGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGATGAATGTGGCATCGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR-3UTR CCA 90 bp GCCTCAGGAAGCCAGGCCTTCCTGCCGCCGCTGGAGGACCTCGATGACGCTGCCGTGGTGCTCGGCCAGTaGCGCGATGACCGAACGGGC +
Preference number: 2 (lower is better)
Translates to: ASGSQAFLPPLEDLDDAAVVLGQ*RDDRTG
Trigger: GCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCAC...GGCAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTCCTGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR-3UTR TCA 90 bp CTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGATCGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 2 (lower is better)
Translates to: LLGQRVDHHGQVLLPHQDRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...ATCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp TGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 2 (lower is better)
Translates to: CRTPGPACGSPRTGPAPARPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...TGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR CCA 90 bp GTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCCCGTGTTCCCCTGCATaGGCAGACACGCAGTCAGGC +
Preference number: 2 (lower is better)
Translates to: VSGAAGPGSLWGMAQASGPCSPA*ADTQSG
Trigger: GCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGG...GCCTGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR TCA 90 bp CTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGATAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 2 (lower is better)
Translates to: LLGQRVDHHGQVLLPHQDNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...ATCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp TCGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 2 (lower is better)
Translates to: SSQAQALRPPRGKCRTPGRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...CCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR GCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTTGCAAACGCCGAGGCTaGGCAGGGAGTGATGGGTTG +
Preference number: 2 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPCKRRG*AGSDGL
Trigger: CAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCA...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR GCA 90 bp CATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 2 (lower is better)
Translates to: HQHRHVVLGQWRDDRTGDPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...ATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR CCA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGTGGTGCTCGGCCAGTaGCGCGATGACCGAACGGGC +
Preference number: 2 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPVVLGQ*RDDRTG
Trigger: GCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCAC...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGTGCCCACTCCACCTGTaGGTGTACACAGGTGTCCGC +
Preference number: 2 (lower is better)
Translates to: AQASGRDCANAEAAQGVMCPLHL*VYTGVR
Trigger: GCGGACACCTGTGTACACTCACAGGTGGAGTGGGCA...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR TCA 90 bp GGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGTGCCCACTCCACCTGTaGGTGTACACAGGTGTCCGC +
Preference number: 2 (lower is better)
Translates to: GLRQGLCKRRGCAGSDGLCPLHL*VYTGVR
Trigger: GCGGACACCTGTGTACACTCACAGGTGGAGTGGGCA...CAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR GCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCACTCAGGCAGGGACTGTaGAAACGCCGAGGCTGCGCA +
Preference number: 2 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSLRQGL*KRRGCA
Trigger: TGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAG...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR GCA 90 bp CGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 2 (lower is better)
Translates to: RHRHRLSAHLAVNVELLGSTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...GCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR GCA 90 bp CATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 2 (lower is better)
Translates to: HQHRHVVLGQWRDDRTGDSTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...ATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR CCA 90 bp CAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATCCGTGTTCCCCTGCATaGGCAGACACGCAGTCAGGC +
Preference number: 2 (lower is better)
Translates to: QRQNGGQRGSWPRKPLGNPCSPA*ADTQSG
Trigger: GCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGG...ATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR TCA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAACTGCCGCACCGCTGTaGGACGACACGTTCAGCACC +
Preference number: 2 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPTAAPL*DDTFST
Trigger: GGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGT...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp AGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTACTGCCGCACCGCTGTaGGACGACACGTTCAGCACC +
Preference number: 2 (lower is better)
Translates to: SSLHCRTAVRRHVQHQPCTAAPL*DDTFST
Trigger: GGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGT...ACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp TCGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 2 (lower is better)
Translates to: SSQAQALRPPRGKCRTPGNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...CCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp CTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 2 (lower is better)
Translates to: LSAHLAVNVELLGQRVDHNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...GTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp ATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 2 (lower is better)
Translates to: MSNSWASVWITTDRSCSRAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...GCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR GCA 90 bp GTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCCCGCGTAAAAGCCGGTaGCTGCACGCAGCTTACATA +
Preference number: 2 (lower is better)
Translates to: VSGAAGPGSLWGMAQASGPRKSR*LHAAYI
Trigger: TATGTAAGCTGCGTGCAGGCACCGGCTTTTACGCGG...GCCTGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR GCA 90 bp GGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGC +
Preference number: 2 (lower is better)
Translates to: GDLGDPSSLHCRTAVRRHVASAT*RNSDGG
Trigger: GCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCAC...GTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
3UTR-3UTR GCA 90 bp GGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 2 (lower is better)
Translates to: GGAVRVEEDIYEGGGDGWPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...CCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp GGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTAAGTCTTTGGAAGCCTaGGTCGAGGGGAGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GRTEVSGAAGPGSLWGMAKSLEA*VEGRAG
Trigger: CCCTGCTCTCCCCTCGACCCAGGCTTCCAAAGACTT...AGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR CCA 90 bp AGCATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGAAGTCTTTGGAAGCCTaGGTCGAGGGGAGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SISTDTWCSASGAMTERAKSLEA*VEGRAG
Trigger: CCCTGCTCTCCCCTCGACCCAGGCTTCCAAAGACTT...CGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR-3UTR CCA 90 bp CTTGGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCGTGGTGCTCGGCCAGTaGCGCGATGACCGAACGGGC +
Preference number: 2 (lower is better)
Translates to: LGGAVRVEEDIYEGGGDGVVLGQ*RDDRTG
Trigger: GCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCAC...GCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp TCGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGTCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 2 (lower is better)
Translates to: SSQAQALRPPRGKCRTPGSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...CCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR TCA 90 bp GAACGTGATGGAGCTGGGTTCAGGACTGCTAGAGGCTGCCTCCTTGGGGGTGCTACTGCCGCACCGCTGTaGGACGACACGTTCAGCACC +
Preference number: 2 (lower is better)
Translates to: ERDGAGFRTARGCLLGGATAAPL*DDTFST
Trigger: GGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGT...AGCACCCCCAAGGAGGCAGCCTCTAGCAGTCCTGAACCCAGCTCCATCACGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421236.5
3UTR-3UTR TCA 90 bp GGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 2 (lower is better)
Translates to: GGAVRVEEDIYEGGGDGWNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...CCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR GCA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCACCGCGTAAAAGCCGGTaGCTGCACGCAGCTTACATA +
Preference number: 2 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASPRKSR*LHAAYI
Trigger: TATGTAAGCTGCGTGCAGGCACCGGCTTTTACGCGG...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR CCA 90 bp GGCTGGGCCCATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATCCCTCGTCATCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 2 (lower is better)
Translates to: GWAHAECGESHCWNHPSSSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp GGGTCCAGTGTGAGGACACAGAAGCGGTTCTGTGGGCTCTGGATGGGATGCACCTCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 2 (lower is better)
Translates to: GSSVRTQKRFCGLWMGCTSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...GGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACACTGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp GGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGTCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 2 (lower is better)
Translates to: GGAVRVEEDIYEGGGDGWSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...CCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR TCA 90 bp CCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 2 (lower is better)
Translates to: PRGKCRTPGPACGSPRTGAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...ACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR GCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTGTAAAAGCCGGTGCCTaGACGCAGCTTACATACAGA +
Preference number: 2 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPVKAGA*TQLTYR
Trigger: TCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTTAC...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR GCA 90 bp TCGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGC +
Preference number: 2 (lower is better)
Translates to: SSQAQALRPPRGKCRTPGVASAT*RNSDGG
Trigger: GCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCAC...CCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
3UTR-3UTR GCA 90 bp CCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 2 (lower is better)
Translates to: PRGKCRTPGPACGSPRTGTTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...ACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR GCA 90 bp GGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGTGGGCCCATGCTGAGTaGGGGGAAAGCCATTGCTGG +
Preference number: 2 (lower is better)
Translates to: GGAVRVEEDIYEGGGDGWWAHAE*GESHCW
Trigger: CCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCA...CCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR GCA 90 bp GGGTCCAGTGTGAGGACACAGAAGCGGTTCTGTGGGCTCTGGATGGGATGCACCTGGGCCCATGCTGAGTaGGGGGAAAGCCATTGCTGG +
Preference number: 2 (lower is better)
Translates to: GSSVRTQKRFCGLWMGCTWAHAE*GESHCW
Trigger: CCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCA...GGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACACTGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR TCA 90 bp GGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGAAGAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 2 (lower is better)
Translates to: GAVRVEEDIYEGGGDGWKNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...CTTCCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp ACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGAAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 2 (lower is better)
Translates to: TPGPACGSPRTGPAPAPGSPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...TCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR CCA 90 bp AAAAGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAAAGTCTTTGGAAGCCTaGGTCGAGGGGAGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: KSRCLHAAYIQRAERGSPKSLEA*VEGRAG
Trigger: CCCTGCTCTCCCCTCGACCCAGGCTTCCAAAGACTT...TGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR CAA 90 bp GCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGGCAGCTCTTTAAAGCCCTCCTCGTC +
Preference number: 2 (lower is better)
Translates to: AVRRHVQHQPCGLSY*QELRWGQLFKALLV
Trigger: GACGAGGAGGGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
3UTR-3UTR CCA 90 bp TCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 2 (lower is better)
Translates to: SAHLAVNVELLGQRVDHHSPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...GTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR CCA 90 bp CTTGGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 2 (lower is better)
Translates to: LGGAVRVEEDIYEGGGDGGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...GCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp GTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGAAGCGTCTCGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 2 (lower is better)
Translates to: VRVEEDIYEGGGDGWKRLGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...GAGACGCTTCCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp CTCCTTGGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 2 (lower is better)
Translates to: LLGGAVRVEEDIYEGGGDGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...ATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCCAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CCA 90 bp AGCAGGAGGTCACTGGGGAACTTTTTCTGTGTTTCAGCATCCATGACAATGGAGATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 2 (lower is better)
Translates to: SRRSLGNFFCVSASMTMEISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...CTCCATTGTCATGGATGCTGAAACACAGAAAAAGTTCCCCAGTGACCTCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421236.5
3UTR-3UTR CCA 90 bp CAGGAGGTCACTGGGGAACTTTTTCTGTGTTTCAGCATCCATGACAATGGAGATACAGAAGCGGTTCTGTaGGCTCTGGATGGGATGCAC +
Preference number: 2 (lower is better)
Translates to: QEVTGELFLCFSIHDNGDTEAVL*ALDGMH
Trigger: GTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGT...ATCTCCATTGTCATGGATGCTGAAACACAGAAAAAGTTCCCCAGTGACCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421236.5
3UTR TCA 72 bp AAGCCAGGCCTTCCTGCCGCCGCTGGAGGACCTCGATaGCGCTGCCGATACCGTCCTCGGGCACCAGGGCGT +
Preference number: 3 (lower is better)
Translates to: KPGLPAAAGGPR*RCRYRPRAPGR
Trigger: ACGCCCTGGTGCCCGAGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR CCA 72 bp CATGGGCCTCAGGAAGCCAGGCCTTCCTGCCGCCGCTaGAGGACCTCGATGACGCTGCCGATACCGTCCTCG +
Preference number: 3 (lower is better)
Translates to: HGPQEARPSCRR*RTSMTLPIPSS
Trigger: CGAGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTCCTGAGGCCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR-3UTR CAA 90 bp GAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: ELLGQRVDHHGQVLLPHQTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...CTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR TCA 72 bp GCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTaGTGGGTTGGGGGCTTAAGCCCCGAGCACCGTGTT +
Preference number: 3 (lower is better)
Translates to: AGTVQTPRLRRE*WVGGLSPEHRV
Trigger: AACACGGTGCTCGGGGCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR GCA 72 bp CGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGACACGTTCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: RTGDLGDPSSLH*RTAVRRHVQHQ
Trigger: CTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR CAA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR TCA 72 bp TTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTaGGACGACACGTTCAGCACCAGCCATGTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: LVTPAACTAAPL*DDTFSTSHVAS
Trigger: TGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
3UTR-3UTR CAA 90 bp TGGAGGACCTCGATGACGCTGCCGATACCGTCCTCGGGCACCAGGGCGTGGTCGAGCTTAGAGAAGTCTTaGGAAGCCTGGGTCGAGGGG +
Preference number: 3 (lower is better)
Translates to: WRTSMTLPIPSSGTRAWSSLEKS*EAWVEG
Trigger: CCCCTCGACCCAGGCTTCCAAAGACTTCTCTAAGCT...CGACCACGCCCTGGTGCCCGAGGACGGTATCGGCAGCGTCATCGAGGTCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
3UTR-3UTR CAA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGAGCTTAGAGAAGTCTTaGGAAGCCTGGGTCGAGGGG +
Preference number: 3 (lower is better)
Translates to: AQASGRDCANAEAAQGVMSLEKS*EAWVEG
Trigger: CCCCTCGACCCAGGCTTCCAAAGACTTCTCTAAGCT...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR CAA 90 bp ATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCTGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGG +
Preference number: 3 (lower is better)
Translates to: MSNSWASVWITTDRSCSRCGLSY*QELRWG
Trigger: CCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACA...GCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
3UTR-3UTR CAA 90 bp CTTGGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: LGGAVRVEEDIYEGGGDGTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...GCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR-3UTR CAA 90 bp AGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAAGCTTAGAGAAGTCTTaGGAAGCCTGGGTCGAGGGG +
Preference number: 3 (lower is better)
Translates to: SRCLHAAYIQRAERGSPASLEKS*EAWVEG
Trigger: CCCCTCGACCCAGGCTTCCAAAGACTTCTCTAAGCT...TGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR-3UTR CAA 90 bp GGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGGTGCGGGGAAAGCCATaGCTGGAATCATCCCTCGTC +
Preference number: 3 (lower is better)
Translates to: GGAVRVEEDIYEGGGDGWVRGKP*LESSLV
Trigger: GACGAGGGATGATTCCAGCAATGGCTTTCCCCGCAC...CCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
3UTR GCA 72 bp GAACGTGATGGAGCTGGGTTCAGGACTGCTAGAGGCTaGCTCCTTGGGGGTGCTGTGCGAGTAGAAGAGGAC +
Preference number: 3 (lower is better)
Translates to: ERDGAGFRTARG*LLGGAVRVEED
Trigger: GTCCTCTTCTACTCGCACAGCACCCCCAAGGAGGCAGCCTCTAGCAGTCCTGAACCCAGCTCCATCACGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421236.5
3UTR CCA 72 bp CACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTaGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCA +
Preference number: 3 (lower is better)
Translates to: HRCETTRSAPAM*PQLLAGTQMGA
Trigger: TGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
3UTR-3UTR CAA 90 bp TGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTTGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGG +
Preference number: 3 (lower is better)
Translates to: CETTRSAPAMWPQLLAGTCGLSY*QELRWG
Trigger: CCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACA...AGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
3UTR-3UTR CAA 90 bp CTCCTTGGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGTCAGGCTGAAGAACTaGCACCTGCCTTACGGCGAT +
Preference number: 3 (lower is better)
Translates to: LLGGAVRVEEDIYEGGGDVRLKN*HLPYGD
Trigger: ATCGCCGTAAGGCAGGTGCAAGTTCTTCAGCCTGAC...ATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCCAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425691.5
3UTR GCA 72 bp CCTGTGAGTGTACACAGGTGTCCGCGTAAAAGCCGGTaGCTGCACGCAGCTTACATACAGAGAGCGGAACGA +
Preference number: 3 (lower is better)
Translates to: PVSVHRCPRKSR*LHAAYIQRAER
Trigger: TCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTTACGCGGACACCTGTGTACACTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR GCA 72 bp GACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGCAGCTCTTTAAAGCCC +
Preference number: 3 (lower is better)
Translates to: DTFSTSHVASAT*RNSDGGSSLKP
Trigger: GGGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR GCA 90 bp CCGCTGGAGGACCTCGATGACGCTGCCGATACCGTCCTCGGGCACCAGGGCGTGTGGGGGCAGCTCGGCTaGGGCGGGGCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLEDLDDAADTVLGHQGVWGQLG*GGAGRA
Trigger: TGCTCTTCCTGCCCCGCCGCAGCCGAGCTGCCCCCA...CACGCCCTGGTGCCCGAGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR GCA 90 bp GGCGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCCCCAGCCCCTATCTaGGCTCCCGAACCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: GAMTERAILVTPAACTAAPPAPI*APEPGR
Trigger: GCGCCCGGGTTCGGGAGCGCAGATAGGGGCTGGGGG...TGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR GCA 90 bp GCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCCCCCAGCCCCTATCTaGGCTCCCGAACCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: AMTERAILVTPAACTAAPPPAPI*APEPGR
Trigger: GCGCCCGGGTTCGGGAGCGCAGATAGGGGCTGGGGG...CGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR GCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTGGGCGGCGGGGGTGGTaGCCGAGCCTTAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPGRRGW*PSLKGA
Trigger: GGCTCCTTTAAGGCTCGGGCACCACCCCCGCCGCCC...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404953.7
CDS-3UTR CCA 90 bp GGCGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCAGCGGGGCGGCGGGGGTaGTGCCCGAGCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GAMTERAILVTPAACTAAAGRRG*CPSLKG
Trigger: TCCTTTAAGGCTCGGGCACCACCCCCGCCGCCCCGC...TGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR TCA 90 bp TGGCGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCCGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WRDDRTGDLGDPSSLHCRRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...GCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp GGCGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCAGGGCTCTGGATGGGATaGACCGTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GAMTERAILVTPAACTAAGLWMG*TVGLGP
Trigger: TGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCC...TGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTGAAGCCAGGCCTTCCTaGCGCCGCTGGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPEARPS*RRWRTS
Trigger: CGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTC...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTGGTCAGCGGGGCAGCTaGCCCAGGAAGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPGQRGS*PRKPLG
Trigger: CCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACC...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
3UTR CAA 72 bp TGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: CSASGAMTERAI*VTPAACTAAPL
Trigger: CAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp GGCAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCAGGCTGCGCAGGGAGTaGTGGGTTGGGGGCTTAAGC +
Preference number: 4 (lower is better)
Translates to: GNPTRGRTEVSGAAGPGSRLRRE*WVGGLS
Trigger: GCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCT...GCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: VSGAAGPGSLWGMAQASGPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...GCCTGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGGGGCTCTGGATGGGATaGACCGTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLRQGLCKRRGCAGSDGLGLWMG*TVGLGP
Trigger: TGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCC...CAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp ACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGAGGGCTCTGGATGGGATaGACCGTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TPGPACGSPRTGPAPAPGGLWMG*TVGLGP
Trigger: TGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCC...TCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGAAGCCAGGCCTTCCTaGCGCCGCTGGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMEARPS*RRWRTS
Trigger: CGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTC...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCAGAAGCCAGGCCTTCCTaGCGCCGCTGGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: PSSLHCRTAVRRHVQHQPEARPS*RRWRTS
Trigger: CGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTC...TGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp GGCAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: GNPTRGRTEVSGAAGPGSISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...GCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGATGCACCGTGGGGCTaGGCCCATGCTGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: DDRTGDLGDPSSLHCRTADAPWG*AHAECG
Trigger: CCCGCACTCAGCATGGGCCCAGCCCCACGGTGCATC...AGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTGGATGGGATGCACCGTaGGGCTGGGCCCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPGWDAP*GWAHAE
Trigger: CTCAGCATGGGCCCAGCCCCACGGTGCATCCCATCC...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTCCTTCCTGCCGCCGCTaGAGGACCTCGATGACGCTG +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPPSCRR*RTSMTL
Trigger: CAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGG...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GAGCACCGTGTTCCCCTGCATGGGCAGACACGCAGTCAGGCTAGCACCTGCCCAGCGGGGCGGCGGGGGTaGTGCCCGAGCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: EHRVPLHGQTRSQASTCPAGRRG*CPSLKG
Trigger: TCCTTTAAGGCTCGGGCACCACCCCCGCCGCCCCGC...TGGGCAGGTGCTAGCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404953.7
CDS-3UTR TCA 90 bp GCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGGGGTCTCCGTCAGGCTaGAGAACTTGCACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: AMTERAILVTPAACTAAPGSPSG*RTCTGC
Trigger: GCAGCCGGTGCAAGTTCTTCAGCCTGACGGAGACCC...CGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR TCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp TGGCGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: WRDDRTGDLGDPSSLHCRNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...GCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCACGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp AGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTCGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 4 (lower is better)
Translates to: RHRLSAHLAVNVELLGQRRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...ACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp CGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGCGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 4 (lower is better)
Translates to: RPPRGKCRTPGPACGSPRRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...CCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp GAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGGGGCTGGGCCCATGCTaGGTGCGGGGAAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: EWLRPQAGTVQTPRLRREGLGPC*VRGKPL
Trigger: CAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCC...CTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTGCTGGAGGACCTCGATaGCGCTGCCGATACCGTCCT +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPAGGPR*RCRYRP
Trigger: AGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGC...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp ATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: MTERAILVTPAACTAAPLPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...CAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp AGCATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: SISTDTWCSASGAMTERAPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...CGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp GGCAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCAGGACTGCTAGAGGCTaGCTCCTTGGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GNPTRGRTEVSGAAGPGSRTARG*LLGGAV
Trigger: CACAGCACCCCCAAGGAGGCAGCCTCTAGCAGTCCT...GCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407689.8
CDS-3UTR GCA 90 bp ACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCGGCAGCCAGGGGACCTaGAATCTGTGCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: TEVSGAAGPGSLWGMAQAGSQGT*NLCHDA
Trigger: GGCATCGTGGCACAGATTGCAGGTCCCCTGGCTGCC...GGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp TGGCGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCGGCAGCCAGGGGACCTaGAATCTGTGCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: WRDDRTGDLGDPSSLHCRGSQGT*NLCHDA
Trigger: GGCATCGTGGCACAGATTGCAGGTCCCCTGGCTGCC...GCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421236.5
ENST00000440839.5
CDS-3UTR GCA 90 bp GGCAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCAGCACCGTGTTCCCCTaGATGGGCAGACACGCAGTC +
Preference number: 4 (lower is better)
Translates to: GNPTRGRTEVSGAAGPGSSTVFP*MGRHAV
Trigger: GACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCT...GCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp ACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCCTCAGGCAGGGACTGTaGAAACGCCGAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: TEVSGAAGPGSLWGMAQALRQGL*KRRGCA
Trigger: TGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAG...GGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: VSGAAGPGSLWGMAQASGISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...GCCTGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCTCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSGAAGPGSLWGMAQASGSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...GCCTGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTGGATGGGATGCACCGTaGGGCTGGGCCCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRTEVSGAAGPGSLWGMAGWDAP*GWAHAE
Trigger: CTCAGCATGGGCCCAGCCCCACGGTGCATCCCATCC...AGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGGATGGGATGCACCGTaGGGCTGGGCCCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: ELLGQRVDHHGQVLLPHQGWDAP*GWAHAE
Trigger: CTCAGCATGGGCCCAGCCCCACGGTGCATCCCATCC...CTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCGGTTCTGTGGGCTCTaGATGGGATGCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPRFCGL*MGCTVG
Trigger: CCCCACGGTGCATCCCATCCAGAGCCCACAGAACCG...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCCTGCTCTGTTGCCCATaGGCCTCAGGAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VSGAAGPGSLWGMAQASGLLCCP*ASGSQA
Trigger: GGCCTGGCTTCCTGAGGCCCATGGGCAACAGAGCAG...GCCTGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTCCGTGTTCCCCTGCATaGGCAGACACGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPPCSPA*ADTQSG
Trigger: GCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGG...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp TGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGGGGGCTTAAGCCCCGAGGTCAGCGGGGCAGCTaGCCCAGGAAGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CANAEAAQGVMGWGLKPRGQRGS*PRKPLG
Trigger: CCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACC...TCGGGGCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGGTCTCCGTCAGGCTaGAGAACTTGCACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASGSPSG*RTCTGC
Trigger: GCAGCCGGTGCAAGTTCTTCAGCCTGACGGAGACCC...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATGGGCTGGGCCCATGCTaGGTGCGGGGAAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: HQHRHVVLGQWRDDRTGDGLGPC*VRGKPL
Trigger: CAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCC...ATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR TCA 90 bp CCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCAGCTGGAGGACCTCGATaGCGCTGCCGATACCGTCCT +
Preference number: 4 (lower is better)
Translates to: PSSLHCRTAVRRHVQHQPAGGPR*RCRYRP
Trigger: AGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGC...TGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR TCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGAGGCTGCGCAGGGAGTaGTGGGTTGGGGGCTTAAGC +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMRLRRE*WVGGLS
Trigger: GCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCT...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGAGAACTTGCACCGGCTaGGGCGGGGCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMRTCTG*GGAGRA
Trigger: TGCTCTTCCTGCCCCGCCGCAGCCGGTGCAAGTTCT...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp ATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: ISTDTWCSASGAMTERAIPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...GATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp TCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: SNSWASVWITTDRSCSRTSTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...GGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPTTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPTTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp TCGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGGGGCTCTGGATGGGATaGACCGTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSQAQALRPPRGKCRTPGGLWMG*TVGLGP
Trigger: TGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCC...CCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCAGCCAGGGGACCTaGAATCTGTGCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASGSQGT*NLCHDA
Trigger: GGCATCGTGGCACAGATTGCAGGTCCCCTGGCTGCC...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp ACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCCGGTGTTCTAGGATGTaGAGCTCCATCGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: TEVSGAAGPGSLWGMAQARCSRM*SSIAAR
Trigger: GCGAGCCGCGATGGAGCTGCACATCCTAGAACACCG...GGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404953.7
CDS-3UTR GCA 90 bp GCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCGGTGTTCTAGGATGTaGAGCTCCATCGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: AMTERAILVTPAACTAAPRCSRM*SSIAAR
Trigger: GCGAGCCGCGATGGAGCTGCACATCCTAGAACACCG...CGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CCA 90 bp CGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGGTGGTGCTCGGCCAGTaGCGCGATGACCGAACGGGC +
Preference number: 4 (lower is better)
Translates to: RSLHTESGTRVPSRTGGSVVLGQ*RDDRTG
Trigger: GCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCAC...CGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: GDPSSLHCRTAVRRHVQHISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...GTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp CAGCATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCTCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: QHQHRHVVLGQWRDDRTGSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...GCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp GGAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGATCTGTGGGCTCTGGATaGGATGCACCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GMAQASGRDCANAEAAQGSVGSG*DAPWGW
Trigger: CCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGA...TCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp ACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGATCTGTGGGCTCTGGATaGGATGCACCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPGPACGSPRTGPAPAPGSVGSG*DAPWGW
Trigger: CCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGA...TCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp GGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACTCTGTGGGCTCTGGATaGGATGCACCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GDLGDPSSLHCRTAVRRHSVGSG*DAPWGW
Trigger: CCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGA...GTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGCGGTTCTGTGGGCTCTaGATGGGATGCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMRFCGL*MGCTVG
Trigger: CCCCACGGTGCATCCCATCCAGAGCCCACAGAACCG...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCACGGTTCTGTGGGCTCTaGATGGGATGCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSSLHCRTAVRRHVQHQPRFCGL*MGCTVG
Trigger: CCCCACGGTGCATCCCATCCAGAGCCCACAGAACCG...TGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp AGCACCGTGTTCCCCTGCATGGGCAGACACGCAGTCAGGCTAGCACCTGCCCACGCTCCCCCGAGGAGCTaGTCAGCAGGAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: STVFPCMGRHAVRLAPAHAPPRS*SAGGHW
Trigger: CCAGTGACCTCCTGCTGACCAGCTCCTCGGGGGAGC...GTGGGCAGGTGCTAGCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp TGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGGGGGCTTAAGCCCCGACCTTCCTGCCGCCGCTaGAGGACCTCGATGACGCTG +
Preference number: 4 (lower is better)
Translates to: CANAEAAQGVMGWGLKPRPSCRR*RTSMTL
Trigger: CAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGG...TCGGGGCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp ATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCCCTTCCTGCCGCCGCTaGAGGACCTCGATGACGCTG +
Preference number: 4 (lower is better)
Translates to: ISTDTWCSASGAMTERAIPSCRR*RTSMTL
Trigger: CAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGG...GATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCTGTCAGGACTCACCTaGCCAGGGAAGGCAACCCCA +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPLSGLT*PGKATP
Trigger: TGGGGTTGCCTTCCCTGGCCAGGTGAGTCCTGACAG...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGGTCTCCGTCAGGCTaGAGAACTTGCACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSGSPSG*RTCTGC
Trigger: GCAGCCGGTGCAAGTTCTTCAGCCTGACGGAGACCC...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp TGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGGGGGCTTAAGCCCCGAACTGCCGCACCGCTGTaGGACGACACGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: CANAEAAQGVMGWGLKPRTAAPL*DDTFST
Trigger: GGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGT...TCGGGGCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: HCRTAVRRHVQHQPCGLSNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...GCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp CGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RPPRGKCRTPGPACGSPRNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...CCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp GCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: ALPHRCETTRSAPAMWPQNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...CTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp GGAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: GMAQASGRDCANAEAAQGAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...TCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp GAGGACCTCGATGACGCTGCCGATACCGTCCTCGGGCACCAGGGCGTGGTCGAAGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: EDLDDAADTVLGHQGVVEAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...TTCGACCACGCCCTGGTGCCCGAGGACGGTATCGGCAGCGTCATCGAGGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR TCA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGGGCTGGGCCCATGCTaGGTGCGGGGAAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPGLGPC*VRGKPL
Trigger: CAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCC...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp CAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: QRQNGGQRGSWPRKPLGNSTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...ATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CAGCATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QHQHRHVVLGQWRDDRTGTTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...GCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp GCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTGGGCTCTGGATGGGATaGACCGTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: AAYIQRAERGSPAEQGARGLWMG*TVGLGP
Trigger: TGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCC...ACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GAGCACCGTGTTCCCCTGCATGGGCAGACACGCAGTCAGGCTAGCACCTGCCCAGGGGCTGTCCACCGATaGGCACCATCCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: EHRVPLHGQTRSQASTCPGAVHR*APSSTA
Trigger: AGCTGTGGAGGATGGTGCGCATCGGTGGACAGCCCC...TGGGCAGGTGCTAGCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCGGCAGCCAGGGGACCTaGAATCTGTGCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: HCRTAVRRHVQHQPCGLSGSQGT*NLCHDA
Trigger: GGCATCGTGGCACAGATTGCAGGTCCCCTGGCTGCC...GCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421236.5
ENST00000440839.5
CDS-3UTR GCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGAGAGCAGGGAGGCTaGTCTGTTGCCCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSGEQGG*SVAHGP
Trigger: AGGCCCATGGGCAACAGAGCAGCCTCCCTGCTCTCC...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCATGCAAACGCCGAGGCTaGGCAGGGAGTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASCKRRG*AGSDGL
Trigger: CAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCA...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CTTGGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCGGGCGGCGGGGGTGGTaGCCGAGCCTTAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGGAVRVEEDIYEGGGDGGRRGW*PSLKGA
Trigger: GGCTCCTTTAAGGCTCGGGCACCACCCCCGCCGCCC...GCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR GCA 90 bp ACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGTGGGGGCAGCTCGGCTaGGGCGGGGCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TAVRRHVQHQPCGLSYLQWGQLG*GGAGRA
Trigger: TGCTCTTCCTGCCCCGCCGCAGCCGAGCTGCCCCCA...CTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421236.5
ENST00000440839.5
CDS-3UTR CCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCATCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: QQPALPHRCETTRSAPAMSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...CATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp ACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGGATGCACCGTGGGGCTaGGCCCATGCTGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: TYRERNEGPQQNRGLVPEDAPWG*AHAECG
Trigger: CCCGCACTCAGCATGGGCCCAGCCCCACGGTGCATC...CTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTGATGCACCGTGGGGCTaGGCCCATGCTGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AAYIQRAERGSPAEQGARDAPWG*AHAECG
Trigger: CCCGCACTCAGCATGGGCCCAGCCCCACGGTGCATC...ACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCGGTTCTGTGGGCTCTaGATGGGATGCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGDPSSLHCRTAVRRHVQRFCGL*MGCTVG
Trigger: CCCCACGGTGCATCCCATCCAGAGCCCACAGAACCG...CTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp CTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCAGCTCCCCCGAGGAGCTaGTCAGCAGGAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LRPPRGKCRTPGPACGSPAPPRS*SAGGHW
Trigger: CCAGTGACCTCCTGCTGACCAGCTCCTCGGGGGAGC...TGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR CCA 90 bp GGAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGATCGGGCACCAGGGCGTaGTCGAAGTTGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GMAQASGRDCANAEAAQGSGTRA*SKLKVL
Trigger: CAGCACCTTCAACTTCGACCACGCCCTGGTGCCCGA...TCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCATCGGGCACCAGGGCGTaGTCGAAGTTGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASSGTRA*SKLKVL
Trigger: CAGCACCTTCAACTTCGACCACGCCCTGGTGCCCGA...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCACTGCTCTGTTGCCCATaGGCCTCAGGAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSLLCCP*ASGSQA
Trigger: GGCCTGGCTTCCTGAGGCCCATGGGCAACAGAGCAG...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp ATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCCTGCTCTGTTGCCCATaGGCCTCAGGAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: MSNSWASVWITTDRSCSRLLCCP*ASGSQA
Trigger: GGCCTGGCTTCCTGAGGCCCATGGGCAACAGAGCAG...GCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp GTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGCAAGTCTTTGGAAGCCTaGGTCGAGGGGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSGAAGPGSLWGMAQASGKSLEA*VEGRAG
Trigger: CCCTGCTCTCCCCTCGACCCAGGCTTCCAAAGACTT...GCCTGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGCAGGGAGTGATGGGTTaGGGGCTTAAGCCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: EWLRPQAGTVQTPRLRREQGVMG*GLKPRA
Trigger: TGCTCGGGGCTTAAGCCCCCAACCCATCACTCCCTG...CTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGCCCAGGAAGCCTTTaGGGAATGGCTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMGPGSL*GMAQAS
Trigger: TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCC...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp AGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAACTGCCGCACCGCTGTaGGACGACACGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SRCLHAAYIQRAERGSPATAAPL*DDTFST
Trigger: GGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGT...TGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp TGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: CRTAVRRHVQHQPCGLSYNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...GTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp GAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGCTTAAGGAAGGGCTGGGCCCATGCTaGGTGCGGGGAAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: ERNEGPQQNRGLVPELKEGLGPC*VRGKPL
Trigger: CAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCC...TTCCTTAAGCTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGC +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMVASAT*RNSDGG
Trigger: GCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCAC...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: RCLHAAYIQRAERGSPAEPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...TTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp TCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: SAHLAVNVELLGQRVDHHSTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...GTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp ATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: ISTDTWCSASGAMTERAITTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...GATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp CATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: HQHRHVVLGQWRDDRTGDTTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...ATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp TGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGGGGGCTTAAGCCCCGATGGGCCCATGCTGAGTaGGGGGAAAGCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: CANAEAAQGVMGWGLKPRWAHAE*GESHCW
Trigger: CCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCA...TCGGGGCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp AGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTTGGGCCCATGCTGAGTaGGGGGAAAGCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: RHRLSAHLAVNVELLGQRWAHAE*GESHCW
Trigger: CCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCA...ACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp CGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCTGGGCCCATGCTGAGTaGGGGGAAAGCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: RHRHRLSAHLAVNVELLGWAHAE*GESHCW
Trigger: CCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCA...GCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp CGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGAGGACTGCTAGAGGCTaGCTCCTTGGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPPRGKCRTPGPACGSPRRTARG*LLGGAV
Trigger: CACAGCACCCCCAAGGAGGCAGCCTCTAGCAGTCCT...CCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR GCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTCCGCGTAAAAGCCGGTaGCTGCACGCAGCTTACATA +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPPRKSR*LHAAYI
Trigger: TATGTAAGCTGCGTGCAGGCACCGGCTTTTACGCGG...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAAGCACCGTGTTCCCCTaGATGGGCAGACACGCAGTC +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSSTVFP*MGRHAV
Trigger: GACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCT...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGCTCAGGCAGGGACTGTaGAAACGCCGAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RSLHTESGTRVPSRTGGSLRQGL*KRRGCA
Trigger: TGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAG...CGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCGGTGTTCTAGGATGTaGAGCTCCATCGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: QPALPHRCETTRSAPAMWRCSRM*SSIAAR
Trigger: GCGAGCCGCGATGGAGCTGCACATCCTAGAACACCG...CCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR GCA 90 bp CTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCGGTGTTCTAGGATGTaGAGCTCCATCGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LGDPSSLHCRTAVRRHVQRCSRM*SSIAAR
Trigger: GCGAGCCGCGATGGAGCTGCACATCCTAGAACACCG...CTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CCA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp TCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: SAHLAVNVELLGQRVDHHISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...GTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCATCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp CTTGGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCGATGCACCGTGGGGCTaGGCCCATGCTGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LGGAVRVEEDIYEGGGDGDAPWG*AHAECG
Trigger: CCCGCACTCAGCATGGGCCCAGCCCCACGGTGCATC...GCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp ACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGATGCACCGTGGGGCTaGGCCCATGCTGAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: TAVRRHVQHQPCGLSYLQDAPWG*AHAECG
Trigger: CCCGCACTCAGCATGGGCCCAGCCCCACGGTGCATC...CTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp GGCTGGGCCCATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATCCCTCGTCAGGATGGGATGCACCGTaGGGCTGGGCCCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: GWAHAECGESHCWNHPSSGWDAP*GWAHAE
Trigger: CTCAGCATGGGCCCAGCCCCACGGTGCATCCCATCC...TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp CCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTGGATGGGATGCACCGTaGGGCTGGGCCCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: PRGKCRTPGPACGSPRTGGWDAP*GWAHAE
Trigger: CTCAGCATGGGCCCAGCCCCACGGTGCATCCCATCC...ACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp AGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCATCTGTGGGCTCTGGATaGGATGCACCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRCLHAAYIQRAERGSPASVGSG*DAPWGW
Trigger: CCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGA...TGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTACAGAAGCGGTTCTGTaGGCTCTGGATGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: QPHQRQNGGQRGSWPRKPTEAVL*ALDGMH
Trigger: GTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGT...AGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGCTTAAGGAAGCTCCCCCGAGGAGCTaGTCAGCAGGAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: ERNEGPQQNRGLVPELKEAPPRS*SAGGHW
Trigger: CCAGTGACCTCCTGCTGACCAGCTCCTCGGGGGAGC...TTCCTTAAGCTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGCCGTGTTCCCCTGCATaGGCAGACACGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RSLHTESGTRVPSRTGGSPCSPA*ADTQSG
Trigger: GCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGG...CGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCACTAATCCTCCGACCCTaGCCCGGAGCGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPLILRP*PGARAE
Trigger: CTCTGCTCTCGCTCCGGGCCAGGGTCGGAGGATTAG...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR TCA 90 bp GCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTAACGGGCGATCTTGGTaGCCCCAGCAGCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: AAYIQRAERGSPAEQGARNGRSW*PQQPAL
Trigger: CAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTT...ACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATCCCTCGTCACAGGCACAGCGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 4 (lower is better)
Translates to: HAECGESHCWNHPSSQAQRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...CTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR TCA 90 bp TCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: SQAQALRPPRGKCRTPGPAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...TGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp TCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: SAHLAVNVELLGQRVDHHAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...GTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp GGAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGATCTCAGGGTCCAGTGTaGGGACACAGAAGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GMAQASGRDCANAEAAQGSQGPV*GHRSGS
Trigger: AGAACCGCTTCTGTGTCCTCACACTGGACCCTGAGA...TCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp AGCATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGTCTCAGGGTCCAGTGTaGGGACACAGAAGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SISTDTWCSASGAMTERASQGPV*GHRSGS
Trigger: AGAACCGCTTCTGTGTCCTCACACTGGACCCTGAGA...CGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR TCA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAAGAAGAGGACATCTATaGGGGTGGTGGCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASRRGHL*GWWRWL
Trigger: CAGCCATCGCCACCACCCTCATAGATGTCCTCTTCT...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTAGAAGGCAAAGAACGTaGTGGAGCTGGGTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPRRQRT*WSWVQD
Trigger: GTCCTGAACCCAGCTCCATCACGTTCTTTGCCTTCT...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407689.8
CDS-3UTR TCA 90 bp CGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAAGCTGGAGGACCTCGATaGCGCTGCCGATACCGTCCT +
Preference number: 4 (lower is better)
Translates to: RCLHAAYIQRAERGSPAEAGGPR*RCRYRP
Trigger: AGGACGGTATCGGCAGCGTCATCGAGGTCCTCCAGC...TTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp ACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGAGAACTTGCACCGGCTaGGGCGGGGCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TYRERNEGPQQNRGLVPERTCTG*GGAGRA
Trigger: TGCTCTTCCTGCCCCGCCGCAGCCGGTGCAAGTTCT...CTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGC +
Preference number: 4 (lower is better)
Translates to: QRQNGGQRGSWPRKPLGNVASAT*RNSDGG
Trigger: GCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCAC...ATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCCCAGCAGCCTGCACTaGCGCACCGCTGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: VQHQPCGLSYLQELRWGQPSSLH*RTAVRR
Trigger: TCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG...CTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
CDS-3UTR GCA 90 bp GCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: AAYIQRAERGSPAEQGARSTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...ACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAAGGGGCTGTCCACCGATaGGCACCATCCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RCLHAAYIQRAERGSPAEGAVHR*APSSTA
Trigger: AGCTGTGGAGGATGGTGCGCATCGGTGGACAGCCCC...TTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGGGGCTGTCCACCGATaGGCACCATCCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: HLAVNVELLGQRVDHHGQGAVHR*APSSTA
Trigger: AGCTGTGGAGGATGGTGCGCATCGGTGGACAGCCCC...CTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR GCA 90 bp ACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCGGGACCTGCAATCTGTaGCACGATGCCACATTCATC +
Preference number: 4 (lower is better)
Translates to: TEVSGAAGPGSLWGMAQAGTCNL*HDATFI
Trigger: GATGAATGTGGCATCGTGGCACAGATTGCAGGTCCC...GGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGGAGAGCAGGGAGGCTaGTCTGTTGCCCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: HLAVNVELLGQRVDHHGQGEQGG*SVAHGP
Trigger: AGGCCCATGGGCAACAGAGCAGCCTCCCTGCTCTCC...CTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp GGCAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCTTGCAGGAACTCAGATaGGGGCAGCTCTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GNPTRGRTEVSGAAGPGSLQELR*GQLFKA
Trigger: GGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAA...GCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGACAGAAGCGGTTCTGTaGGCTCTGGATGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: AQASGRDCANAEAAQGVMTEAVL*ALDGMH
Trigger: GTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGT...CATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GAGCACCGTGTTCCCCTGCATGGGCAGACACGCAGTCAGGCTAGCACCTGCCCAAAGTCTTTGGAAGCCTaGGTCGAGGGGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EHRVPLHGQTRSQASTCPKSLEA*VEGRAG
Trigger: CCCTGCTCTCCCCTCGACCCAGGCTTCCAAAGACTT...TGGGCAGGTGCTAGCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCCAGGGAGTGATGGGTTaGGGGCTTAAGCCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: ARSLHTESGTRVPSRTGGQGVMG*GLKPRA
Trigger: TGCTCGGGGCTTAAGCCCCCAACCCATCACTCCCTG...GCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp GGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGTCAGCAGGAGGTCACTaGGGAACCTGTGCGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GLRQGLCKRRGCAGSDGLSAGGH*GTCASR
Trigger: TCTACTCGCACAGGTTCCCCAGTGACCTCCTGCTGA...CAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404953.7
CDS-3UTR TCA 90 bp TGGGGGCAGCTCTTTAAAGCCCTCCTCGTCCACCATAAGCGTGTAATCCTCAGGCGGCCAGTGGCGCGATaGCCGAACGGGCGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WGQLFKALLVHHKRVILRRPVAR*PNGRSW
Trigger: CCAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCG...CCTGAGGATTACACGCTTATGGTGGACGAGGAGGGCTTTAAAGAGCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR TCA 90 bp CGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCTGGGCCCATGCTaGGTGCGGGGAAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: RHVQHQPCGLSYLQELRWGLGPC*VRGKPL
Trigger: CAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCC...CCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415484.5
ENST00000425691.5
CDS-3UTR TCA 90 bp GAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGCTTAAGGAATGCCCACTCCACCTGTaGGTGTACACAGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: ERNEGPQQNRGLVPELKECPLHL*VYTGVR
Trigger: GCGGACACCTGTGTACACTCACAGGTGGAGTGGGCA...TTCCTTAAGCTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAATGCCCACTCCACCTGTaGGTGTACACAGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: RCLHAAYIQRAERGSPAECPLHL*VYTGVR
Trigger: GCGGACACCTGTGTACACTCACAGGTGGAGTGGGCA...TTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp TCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGATGCCACATTCATCATGCTaGGTGCGGGGAAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SWASVWITTDRSCSRTRMPHSSC*VRGKPL
Trigger: CAATGGCTTTCCCCGCACTCAGCATGATGAATGTGG...CATCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR GCA 90 bp GTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGAGAACTTGCACCGGCTaGGGCGGGGCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VQHQPCGLSYLQELRWGQRTCTG*GGAGRA
Trigger: TGCTCTTCCTGCCCCGCCGCAGCCGGTGCAAGTTCT...CTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR GCA 90 bp ACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGTGGGCCCATGCTGAGTaGGGGGAAAGCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: TYRERNEGPQQNRGLVPEWAHAE*GESHCW
Trigger: CCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCA...CTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGGACCTGCAATCTGTaGCACGATGCCACATTCATC +
Preference number: 4 (lower is better)
Translates to: RTPGPACGSPRTGPAPAPGTCNL*HDATFI
Trigger: GATGAATGTGGCATCGTGGCACAGATTGCAGGTCCC...TGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421236.5
ENST00000440839.5
CDS-3UTR GCA 90 bp AAAAGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGGAGAGCAGGGAGGCTaGTCTGTTGCCCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: KSRCLHAAYIQRAERGSPGEQGG*SVAHGP
Trigger: AGGCCCATGGGCAACAGAGCAGCCTCCCTGCTCTCC...TGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCACCGCGTAAAAGCCGGTaGCTGCACGCAGCTTACATA +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSPRKSR*LHAAYI
Trigger: TATGTAAGCTGCGTGCAGGCACCGGCTTTTACGCGG...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp TGGCGCGATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: WRDDRTGDLGDPSSLHCRSPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...GCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCATCGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCAGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: PSSLHCRTAVRRHVQHQPGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...TGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp GAGGACCTCGATGACGCTGCCGATACCGTCCTCGGGCACCAGGGCGTGGTCGAAGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: EDLDDAADTVLGHQGVVEGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...TTCGACCACGCCCTGGTGCCCGAGGACGGTATCGGCAGCGTCATCGAGGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp CTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGACAGAAGCGGTTCTGTaGGCTCTGGATGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: LGDPSSLHCRTAVRRHVQTEAVL*ALDGMH
Trigger: GTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGT...CTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp CTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACAAGTCTTTGGAAGCCTaGGTCGAGGGGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSAHLAVNVELLGQRVDHKSLEA*VEGRAG
Trigger: CCCTGCTCTCCCCTCGACCCAGGCTTCCAAAGACTT...GTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp GCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTGGCCCAGGAAGCCTTTaGGGAATGGCTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AAYIQRAERGSPAEQGARGPGSL*GMAQAS
Trigger: TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCC...ACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: HRCETTRSAPAMWPQLLAAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...TGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR TCA 90 bp CCTCGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGTCTCAGGGTCCAGTGTaGGGACACAGAAGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: PRHRHRLSAHLAVNVELLSQGPV*GHRSGS
Trigger: AGAACCGCTTCTGTGTCCTCACACTGGACCCTGAGA...CAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR TCA 90 bp GCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCAGAAGAGGACATCTATaGGGGTGGTGGCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: ARSLHTESGTRVPSRTGGRRGHL*GWWRWL
Trigger: CAGCCATCGCCACCACCCTCATAGATGTCCTCTTCT...GCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp CTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACAGAAGAGGACATCTATaGGGGTGGTGGCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: LSAHLAVNVELLGQRVDHRRGHL*GWWRWL
Trigger: CAGCCATCGCCACCACCCTCATAGATGTCCTCTTCT...GTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp GCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAAAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: AVRRHVQHQPCGLSYLQESTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...TTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR GCA 90 bp CATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: HQHRHVVLGQWRDDRTGDCGESH*WNHPSS
Trigger: TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCA...ATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR GCA 90 bp CGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAATCTGTGCCACGATaGCACATTCATCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRSAGQLAQEAFGEWLRPQSVPR*HIHQSP
Trigger: TGGGCTTTGATGAATGTGGCATCGTGGCACAGATTG...AGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp AGCACCGTGTTCCCCTGCATGGGCAGACACGCAGTCAGGCTAGCACCTGCCCACGGGACCTGCAATCTGTaGCACGATGCCACATTCATC +
Preference number: 4 (lower is better)
Translates to: STVFPCMGRHAVRLAPAHGTCNL*HDATFI
Trigger: GATGAATGTGGCATCGTGGCACAGATTGCAGGTCCC...GTGGGCAGGTGCTAGCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTGTAAAAGCCGGTGCCTaGACGCAGCTTACATACAGA +
Preference number: 4 (lower is better)
Translates to: GRTEVSGAAGPGSLWGMAVKAGA*TQLTYR
Trigger: TCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTTAC...AGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp AAAAGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCATGCAAACGCCGAGGCTaGGCAGGGAGTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: KSRCLHAAYIQRAERGSPCKRRG*AGSDGL
Trigger: CAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCA...TGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATCCCTCGTCACAGGCACAGATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: HAECGESHCWNHPSSQAQISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...CTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CCA 90 bp GAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: EWLRPQAGTVQTPRLRRESPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...CTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp TCCTGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCAGGATGAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: SWASVWITTDRSCSRTRMSPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...CATCCTGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp ATGACCGAACGGGCGATCTTGGTGACCCCAGCAGCCTGCACTGCCGCACCGCTGAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: MTERAILVTPAACTAAPLSPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...CAGCGGTGCGGCAGTGCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp ATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: ISTDTWCSASGAMTERAIGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...GATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp GAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGCGGTTCTGTGGGCTCTaGATGGGATGCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: ETTRSAPAMWPQLLAGTQRFCGL*MGCTVG
Trigger: CCCCACGGTGCATCCCATCCAGAGCCCACAGAACCG...CTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415484.5
ENST00000425691.5
CDS-3UTR CCA 90 bp CGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGATCGGGCACCAGGGCGTaGTCGAAGTTGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RCETTRSAPAMWPQLLAGSGTRA*SKLKVL
Trigger: CAGCACCTTCAACTTCGACCACGCCCTGGTGCCCGA...TCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp CACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCAGATGGGGGCAGCTCTaGGTTCAAATCCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: HCRTAVRRHVQHQPCGLSRWGQL*VQIPAL
Trigger: CAAAGCTGGGATTTGAACCCAGAGCTGCCCCCATCT...GCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR TCA 90 bp CGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGCTCCCGCACCAGGATaGAGTCCGTCTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: RHVQHQPCGLSYLQELRWAPAPG*SPSGKW
Trigger: CCACTTACCAGACGGACTTCATCCTGGTGCGGGAGC...CCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
CDS-3UTR TCA 90 bp GAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGCTTAAGGAATCTCAGGGTCCAGTGTaGGGACACAGAAGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ERNEGPQQNRGLVPELKESQGPV*GHRSGS
Trigger: AGAACCGCTTCTGTGTCCTCACACTGGACCCTGAGA...TTCCTTAAGCTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR TCA 90 bp GGCTGGGCCCATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATCCCTCGTCAAGAAGAGGACATCTATaGGGGTGGTGGCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: GWAHAECGESHCWNHPSSRRGHL*GWWRWL
Trigger: CAGCCATCGCCACCACCCTCATAGATGTCCTCTTCT...TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp TGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTAGCACAGACACGTGGTaGTCGGCCAGTGGCGCGATG +
Preference number: 4 (lower is better)
Translates to: CETTRSAPAMWPQLLAGTSTDTW*SASGAM
Trigger: CATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT...AGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
CDS-3UTR GCA 90 bp CTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LSAHLAVNVELLGQRVDHCGESH*WNHPSS
Trigger: TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCA...GTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR GCA 90 bp TGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGGGGGCTTAAGCCCCGAGTAAAAGCCGGTGCCTaGACGCAGCTTACATACAGA +
Preference number: 4 (lower is better)
Translates to: CANAEAAQGVMGWGLKPRVKAGA*TQLTYR
Trigger: TCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTTAC...TCGGGGCTTAAGCCCCCAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp AGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGAATCAGCACAGACACGTaGTGCTCGGCCAGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: RRHVQHQPCGLSYLQELRISTDT*CSASGA
Trigger: CGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT...TCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
CDS-3UTR CCA 90 bp CAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: QRQNGGQRGSWPRKPLGNSPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...ATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp CATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATAGTCCGTCTGGTAAGTaGACAGCATCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: HQHRHVVLGQWRDDRTGDSPSGK*TASAQT
Trigger: TGTCTGTGCTGATGCTGTCCACTTACCAGACGGACT...ATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp TGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: CRTAVRRHVQHQPCGLSYGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...GTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CCA 90 bp CTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCTCTGGGTTCAAATCCCAGCTTCTGTGGGCTCTGGATaGGATGCACCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSYLQELRWGQLWVQIPASVGSG*DAPWGW
Trigger: CCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGA...AGCTGGGATTTGAACCCAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR CCA 90 bp CACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGACAGAAGCGGTTCTGTaGGCTCTGGATGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: HLAVNVELLGQRVDHHGQTEAVL*ALDGMH
Trigger: GTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGT...CTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CCA 90 bp TGGGGGCAGCTCTTTAAAGCCCTCCTCGTCCACCATAAGCGTGTAATCCTCAGGCTAATCCTCCGACCCTaGCCCGGAGCGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WGQLFKALLVHHKRVILRLILRP*PGARAE
Trigger: CTCTGCTCTCGCTCCGGGCCAGGGTCGGAGGATTAG...CCTGAGGATTACACGCTTATGGTGGACGAGGAGGGCTTTAAAGAGCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR TCA 90 bp ACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGAGAAGAGGACATCTATaGGGGTGGTGGCGATGGCTG +
Preference number: 4 (lower is better)
Translates to: TAVRRHVQHQPCGLSYLQRRGHL*GWWRWL
Trigger: CAGCCATCGCCACCACCCTCATAGATGTCCTCTTCT...CTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR TCA 90 bp GAACGTGATGGAGCTGGGTTCAGGACTGCTAGAGGCTGCCTCCTTGGGGGTGCTAGAAGGCAAAGAACGTaGTGGAGCTGGGTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: ERDGAGFRTARGCLLGGARRQRT*WSWVQD
Trigger: GTCCTGAACCCAGCTCCATCACGTTCTTTGCCTTCT...AGCACCCCCAAGGAGGCAGCCTCTAGCAGTCCTGAACCCAGCTCCATCACGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR TCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAAGATATAACCCTCGATaGGGGAGAAGGCAAAGAACG +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSRYNPR*GRRQRT
Trigger: CGTTCTTTGCCTTCTCCCTCATCGAGGGTTATATCT...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407689.8
CDS-3UTR GCA 90 bp ACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TYRERNEGPQQNRGLVPECGESH*WNHPSS
Trigger: TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCA...CTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp GGGTCCAGTGTGAGGACACAGAAGCGGTTCTGTGGGCTCTGGATGGGATGCACCTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: GSSVRTQKRFCGLWMGCTCGESH*WNHPSS
Trigger: TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCA...GGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACACTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp AGCACCGTGTTCCCCTGCATGGGCAGACACGCAGTCAGGCTAGCACCTGCCCACCAATCTGTGCCACGATaGCACATTCATCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: STVFPCMGRHAVRLAPAHQSVPR*HIHQSP
Trigger: TGGGCTTTGATGAATGTGGCATCGTGGCACAGATTG...GTGGGCAGGTGCTAGCCTGACTGCGTGTCTGCCCATGCAGGGGAACACGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp AGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCATTGCAGGAACTCAGATaGGGGCAGCTCTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: SRCLHAAYIQRAERGSPALQELR*GQLFKA
Trigger: GGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAA...TGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CCA 90 bp TGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGATaGGGGCAGCTCTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: CRTAVRRHVQHQPCGLSYLQELR*GQLFKA
Trigger: GGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAA...GTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR CCA 90 bp GAACTCAGATGGGGGCAGCTCTTTAAAGCCCTCCTCGTCCACCATAAGCGTGTATCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: ELRWGQLFKALLVHHKRVSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...TACACGCTTATGGTGGACGAGGAGGGCTTTAAAGAGCTGCCCCCATCTGAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR CCA 90 bp GGGGGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAG +
Preference number: 4 (lower is better)
Translates to: GGAVRVEEDIYEGGGDGWGESHC*NHPSSQ
Trigger: CTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCC...CCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACCCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR GCA 90 bp CAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCTCTTTAAAACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QPCGLSYLQELRWGQLFKTTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...TTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR GCA 90 bp AAAAGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCATGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: KSRCLHAAYIQRAERGSPCGESH*WNHPSS
Trigger: TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCA...TGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR GCA 90 bp ACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TAVRRHVQHQPCGLSYLQCGESH*WNHPSS
Trigger: TGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCA...CTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CCA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCATCAGCAGGAGGTCACTaGGGAACTTTTTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSSAGGH*GTFSVF
Trigger: AAACACAGAAAAAGTTCCCCAGTGACCTCCTGCTGA...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407689.8
CDS-3UTR CCA 90 bp AGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTTCAGCAGGAGGTCACTaGGGAACTTTTTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RHRLSAHLAVNVELLGQRSAGGH*GTFSVF
Trigger: AAACACAGAAAAAGTTCCCCAGTGACCTCCTGCTGA...ACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421236.5
3UTR CAA 72 bp CGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGGCAGCTCTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: RHVQHQPCGLSY*QELRWGQLFKA
Trigger: GGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR TCA 90 bp CATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCTCTGGGTTCAAATCTCAGGGTCCAGTGTaGGGACACAGAAGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: HVASATCRNSDGGSSGFKSQGPV*GHRSGS
Trigger: AGAACCGCTTCTGTGTCCTCACACTGGACCCTGAGA...TTTGAACCCAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR TCA 90 bp GAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGCTGGGGTGGGTGATTTaGGTCTCAGTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: ETTRSAPAMWPQLLAGTQLGWVI*VSVSSS
Trigger: AGATGAGGAAACTGAGACTCAAATCACCCACCCCAG...CTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR GCA 90 bp CACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCACAATCTGTGCCACGATaGCACATTCATCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: HRCETTRSAPAMWPQLLAQSVPR*HIHQSP
Trigger: TGGGCTTTGATGAATGTGGCATCGTGGCACAGATTG...TGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR CCA 90 bp GAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGTTGCAGGAACTCAGATaGGGGCAGCTCTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: ETTRSAPAMWPQLLAGTQLQELR*GQLFKA
Trigger: GGCTTTAAAGAGCTGCCCCCATCTGAGTTCCTGCAA...CTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425691.5
ENST00000440704.5
CDS-3UTR TCA 90 bp GGTGCTGTGCGAGTAGAAGAGGACATCTATGAGGGTGGTGGCGATGGCTGGAAGAGATATAACCCTCGATaGGGGAGAAGGCAAAGAACG +
Preference number: 4 (lower is better)
Translates to: GAVRVEEDIYEGGGDGWKRYNPR*GRRQRT
Trigger: CGTTCTTTGCCTTCTCCCTCATCGAGGGTTATATCT...CTTCCAGCCATCGCCACCACCCTCATAGATGTCCTCTTCTACTCGCACAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR GCA 90 bp AGCAGGAGGTCACTGGGGAACTTTTTCTGTGTTTCAGCATCCATGACAATGGAGTGGGCCCATGCTGAGTaGGGGGAAAGCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRRSLGNFFCVSASMTMEWAHAE*GESHCW
Trigger: CCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCA...CTCCATTGTCATGGATGCTGAAACACAGAAAAAGTTCCCCAGTGACCTCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR GCA 90 bp CATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATCCCTCGTCACAGGCACAGCAATCTGTGCCACGATaGCACATTCATCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: HAECGESHCWNHPSSQAQQSVPR*HIHHAE
Trigger: CTCAGCATGATGAATGTGGCATCGTGGCACAGATTG...CTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS-3UTR CCA 90 bp CAGGAGGTCACTGGGGAACTTTTTCTGTGTTTCAGCATCCATGACAATGGAGATTCCTGGGCCAGCGTGTaGATCACCACGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: QEVTGELFLCFSIHDNGDSWASV*ITTDRS
Trigger: GGACCTGTCCGTGGTGATCCACACGCTGGCCCAGGA...ATCTCCATTGTCATGGATGCTGAAACACAGAAAAAGTTCCCCAGTGACCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR GCA 90 bp CAGGAGGTCACTGGGGAACTTTTTCTGTGTTTCAGCATCCATGACAATGGAGATACCACGGACAGGTCCTaGTCCCGCACCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QEVTGELFLCFSIHDNGDTTDRS*SRTRMK
Trigger: CTTCATCCTGGTGCGGGAGCAGGACCTGTCCGTGGT...ATCTCCATTGTCATGGATGCTGAAACACAGAAAAAGTTCCCCAGTGACCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421236.5
CDS-3UTR GCA 90 bp CCACGATGCCACATTCATCATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATGGGACCTGCAATCTGTaGCACGATGCCACATTCATC +
Preference number: 4 (lower is better)
Translates to: PRCHIHHAECGESHCWNHGTCNL*HDATFI
Trigger: GATGAATGTGGCATCGTGGCACAGATTGCAGGTCCC...ATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGATGAATGTGGCATCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS GCA 90 bp CCGGGACGGGCGACGCTCAGCACCCGCACCCGGTGTTCTAGGATGTaGAGCTCCATCGCGGCTCGCGCGGACCCGACCCCGCCGCCAACT +
Preference number: 5 (lower is better)
Translates to: PGRATLSTRTRCSRM*SSIAARADPTPPPT
Trigger: AGTTGGCGGCGGGGTCGGGTCCGCGCGAGCCGCGATGGAGCTGCACATCCTAGAACACCGGGTGCGGGTGCTGAGCGTCGCCCGTCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000404953.7
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
ENST00000463795.5
ENST00000471480.6
ENST00000497605.6
ENST00000498572.1
CDS-3UTR CAA 90 bp GGCAACCCCACCAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCTGGCCCAGGAAGCCTTaGGGGAATGGCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: GNPTRGRTEVSGAAGPGSWPRKP*GNGSGL
Trigger: GAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCA...GCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTGGTGGGGTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS CCA 90 bp CCGTGGGGCTGGGCCCTGCATGCTGAGTGCGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAGGCACAGGCTCTCCGCCCACCTCGC +
Preference number: 5 (lower is better)
Translates to: PWGWALHAECGESHC*NHPSSQAQALRPPR
Trigger: GCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGCAGGGCCCAGCCCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463795.5
CDS-3UTR CAA 90 bp CAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGTCAGGCTGAAGAACTaGCACCGGCTGCGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: QNGGQRGSWPRKPLGNGSVRLKN*HRLRRG
Trigger: GCCCCGCCGCAGCCGGTGCAAGTTCTTCAGCCTGAC...TGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp ATCAGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCGTCAGGCTGAAGAACTaGCACCGGCTGCGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: ISTDTWCSASGAMTERAIVRLKN*HRLRRG
Trigger: GCCCCGCCGCAGCCGGTGCAAGTTCTTCAGCCTGAC...GATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR CAA 90 bp GGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGTGATGGGTTGACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GLRQGLCKRRGCAGSDGLTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...CAACCCATCACTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS GCA 90 bp GCACCGTGGGGCTGGGCCCTGCATGCTGAGTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCACAGGCACAGGCTCTCCGCCCACCT +
Preference number: 5 (lower is better)
Translates to: APWGWALHAECGESH*WNHPSSQAQALRPP
Trigger: AGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGCAGGGCCCAGCCCCACGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463795.5
CDS GCA 90 bp CTGGGAAGGAGCTGGTATGGTGGCCTGGGCAGGCTCTGCCATATCTaGTACCCGCCCAAGGGTCCAGCCCTCTGGAAGGTGTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LGRSWYGGLGRLCHI*YPPKGPALWKVWVG
Trigger: CCCCACCCACACCTTCCAGAGGGCTGGACCCTTGGGCGGGTAGCAGATATGGCAGAGCCTGCCCAGGCCACCATACCAGCTCCTTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS GCA 90 bp GGGAGGGATGGGAGGTTTAGGGGCTCTACCAGGCACCCAGCCTACTaGCCCTGCTCCCGATCAGCCTCCAGAACCCTGGGAAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRDGRFRGSTRHPAY*PCSRSASRTLGRSW
Trigger: CCAGCTCCTTCCCAGGGTTCTGGAGGCTGATCGGGAGCAGGGGCAGTAGGCTGGGTGCCTGGTAGAGCCCCTAAACCTCCCATCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS CCA 90 bp TCAGGGGGCGGCCCTCACCATGCTGAGTGCGGGGAAAGCCATTGCTaGAATCATCCCTCGTCACAGGCACAGGCTCTCCGCCCACCTCGC +
Preference number: 5 (lower is better)
Translates to: SGGGPHHAECGESHC*NHPSSQAQALRPPR
Trigger: GCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGTGAGGGCCGCCCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471480.6
ENST00000492159.5
CDS-3UTR CAA 90 bp CAGAGGCAGAACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QRQNGGQRGSWPRKPLGNTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...ATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGTTCTGCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp CGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: RHRHRLSAHLAVNVELLGTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...GCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS-3UTR CAA 90 bp CAGCAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QQPALPHRCETTRSAPAMTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...CATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440704.5
ENST00000440839.5
CDS GCA 90 bp GTGTCAGGGGGCGGCCCTCACCATGCTGAGTGCGGGGAAAGCCATTaGTGGAATCATCCCTCGTCACAGGCACAGGCTCTCCGCCCACCT +
Preference number: 5 (lower is better)
Translates to: VSGGGPHHAECGESH*WNHPSSQAQALRPP
Trigger: AGGTGGGCGGAGAGCCTGTGCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGTGAGGGCCGCCCCCTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471480.6
ENST00000492159.5
CDS CCA 90 bp GTCTCAGGGTCCAGTGTGAGGACACAGAAGCGGTTCTGTGGGCTCTaGATGGGATGCACCGTGGGGCTGGGCCCTGCTGGAGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: VSGSSVRTQKRFCGL*MGCTVGLGPAGGQQ
Trigger: CTGCTGTCCTCCAGCAGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACACTGGACCCTGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471480.6
CDS CCA 90 bp TACTGCCCCTGCTCCCGATCAGCCTCCAGAACCCTGGGAAGGAGCTaGTATGGTGGCCTGGGCAGGCTCTGCCATATCTGCTACCCGCCC +
Preference number: 5 (lower is better)
Translates to: YCPCSRSASRTLGRS*YGGLGRLCHICYPP
Trigger: GGGCGGGTAGCAGATATGGCAGAGCCTGCCCAGGCCACCATACCAGCTCCTTCCCAGGGTTCTGGAGGCTGATCGGGAGCAGGGGCAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS CCA 90 bp GGCACCCAGCCTACTGCCCCTGCTCCCGATCAGCCTCCAGAACCCTaGGAAGGAGCTGGTATGGTGGCCTGGGCAGGCTCTGCCATATCT +
Preference number: 5 (lower is better)
Translates to: GTQPTAPAPDQPPEP*EGAGMVAWAGSAIS
Trigger: AGATATGGCAGAGCCTGCCCAGGCCACCATACCAGCTCCTTCCCAGGGTTCTGGAGGCTGATCGGGAGCAGGGGCAGTAGGCTGGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS-3UTR CAA 90 bp ACGGAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: TEVSGAAGPGSLWGMAQACGLSY*QELRWG
Trigger: CCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACA...GGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp GCACCGTGGGGCTGGGCCCATGCTGAGTGCGGGGAAAGCCATTGCTGGAATCATACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: APWGWAHAECGESHCWNHTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...ATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGGCCCAGCCCCACGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
CDS-3UTR CAA 90 bp GCCTCAGGAAGCCAGGCCTTCCTGCCGCCGCTGGAGGACCTCGATGACGCTGCCAGCTTAGAGAAGTCTTaGGAAGCCTGGGTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: ASGSQAFLPPLEDLDDAASLEKS*EAWVEG
Trigger: CCCCTCGACCCAGGCTTCCAAAGACTTCTCTAAGCT...GGCAGCGTCATCGAGGTCCTCCAGCGGCGGCAGGAAGGCCTGGCTTCCTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440839.5
CDS TCA 90 bp AGGCCCTGCCCAAGTCCAAGTGTCAGGGGGCGGCCCTCACCATGCTaGGTGCGGGGAAAGCCATTGCTGGAATCATCCCTCGTCACAGGC +
Preference number: 5 (lower is better)
Translates to: RPCPSPSVRGRPSPC*VRGKPLLESSLVTG
Trigger: GCCTGTGACGAGGGATGATTCCAGCAATGGCTTTCCCCGCACTCAGCATGGTGAGGGCCGCCCCCTGACACTTGGACTTGGGCAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471480.6
ENST00000492159.5
CDS GCA 90 bp TCCAGAACCCTGGGAAGGAGCTGGTATGGTGGCCTGGGCAGGCTCTaGCATATCTGCTACCCGCCCAAGGGTCCAGCCCTCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SRTLGRSWYGGLGRL*HICYPPKGPALWKV
Trigger: CACCTTCCAGAGGGCTGGACCCTTGGGCGGGTAGCAGATATGGCAGAGCCTGCCCAGGCCACCATACCAGCTCCTTCCCAGGGTTCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS CCA 90 bp GCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTaGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: ALPHRCETTRSAPAM*PQLLAGTQMGAARL
Trigger: CAGCCGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421236.5
ENST00000440839.5
ENST00000471480.6
ENST00000497605.6
CDS CCA 90 bp TGGGCCAGCGTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCTaGGCCACAGCAGATGGCACATCACATGGGCTCCCAGGTACCTAT +
Preference number: 5 (lower is better)
Translates to: WASVWITTDRSCSRT*ATADGTSHGLPGTY
Trigger: ATAGGTACCTGGGAGCCCATGTGATGTGCCATCTGCTGTGGCCCAGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACACGCTGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492159.5
CDS-3UTR CAA 90 bp AAAAGCCGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGTCAGGCTGAAGAACTaGCACCGGCTGCGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: KSRCLHAAYIQRAERGSPVRLKN*HRLRRG
Trigger: GCCCCGCCGCAGCCGGTGCAAGTTCTTCAGCCTGAC...TGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCGGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCATGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASCGLSY*QELRWG
Trigger: CCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACA...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp GAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGGTGCGGGGAAAGCCATaGCTGGAATCATCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: EWLRPQAGTVQTPRLRREVRGKP*LESSLV
Trigger: GACGAGGGATGATTCCAGCAATGGCTTTCCCCGCAC...CTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS GCA 90 bp GATGGGAGGTTTAGGGGCTCTACCAGGCACCCAGCCTACTGCCCCTaGTCCCGATCAGCCTCCAGAACCCTGGGAAGGAGCTGGTATGGT +
Preference number: 5 (lower is better)
Translates to: DGRFRGSTRHPAYCP*SRSASRTLGRSWYG
Trigger: ACCATACCAGCTCCTTCCCAGGGTTCTGGAGGCTGATCGGGAGCAGGGGCAGTAGGCTGGGTGCCTGGTAGAGCCCCTAAACCTCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS-3UTR CAA 90 bp CACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGGGACCGAACGGGCGATCTaGGTGACCCCAGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: HVQHQPCGLSYLQELRWGTERAI*VTPAAC
Trigger: GCAGGCTGCTGGGGTCACCAAGATCGCCCGTTCGGT...CCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415484.5
ENST00000425691.5
ENST00000440704.5
CDS-3UTR CAA 90 bp AGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGCGGGGAAAGCCATaGCTGGAATCATCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: RHRLSAHLAVNVELLGQRVRGKP*LESSLV
Trigger: GACGAGGGATGATTCCAGCAATGGCTTTCCCCGCAC...ACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CAA 90 bp CAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGGTGCGGGGAAAGCCATaGCTGGAATCATCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: QPALPHRCETTRSAPAMWVRGKP*LESSLV
Trigger: GACGAGGGATGATTCCAGCAATGGCTTTCCCCGCAC...CCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CAA 90 bp GAGGTCAGCGGGGCAGCTGGCCCAGGAAGCCTTTGGGGAATGGCTCAGGCCTCAAGCTTAGAGAAGTCTTaGGAAGCCTGGGTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: EVSGAAGPGSLWGMAQASSLEKS*EAWVEG
Trigger: CCCCTCGACCCAGGCTTCCAAAGACTTCTCTAAGCT...TGAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCAGCTGCCCCGCTGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp GCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTGGCCCAGGAAGCCTTaGGGGAATGGCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: AAYIQRAERGSPAEQGARWPRKP*GNGSGL
Trigger: GAGGCCTGAGCCATTCCCCAAAGGCTTCCTGGGCCA...ACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS CCA 90 bp GCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTaGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCTCTCACT +
Preference number: 5 (lower is better)
Translates to: ALPHRCETTRSAPAM*PQLLAGTQMGAALT
Trigger: AGTGAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464854.1
CDS CCA 90 bp CAGGTCCTGCTCCCGCACCTGGGCCACAGCAGATGGCACATCACATaGGCTCCCAGGTACCTATATCCACCCTGCTCTGCATCAGCACCA +
Preference number: 5 (lower is better)
Translates to: QVLLPHLGHSRWHIT*APRYLYPPCSASAP
Trigger: TGGTGCTGATGCAGAGCAGGGTGGATATAGGTACCTGGGAGCCCATGTGATGTGCCATCTGCTGTGGCCCAGGTGCGGGAGCAGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492159.5
CDS CCA 90 bp GCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTaGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCTCTTACG +
Preference number: 5 (lower is better)
Translates to: ALPHRCETTRSAPAM*PQLLAGTQMGAALT
Trigger: CGTAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498572.1
CDS-3UTR CAA 90 bp CTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACGTGCGGGGAAAGCCATaGCTGGAATCATCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: LSAHLAVNVELLGQRVDHVRGKP*LESSLV
Trigger: GACGAGGGATGATTCCAGCAATGGCTTTCCCCGCAC...GTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CAA 90 bp GAATGGCTCAGGCCTCAGGCAGGGACTGTGCAAACGCCGAGGCTGCGCAGGGAGGTCAAAATACTTTCCTaGGAGGCCCCAGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: EWLRPQAGTVQTPRLRREVKILS*EAPGGR
Trigger: TCTCCCTCCTGGGGCCTCCAAGGAAAGTATTTTGAC...CTCCCTGCGCAGCCTCGGCGTTTGCACAGTCCCTGCCTGAGGCCTGAGCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp CAGCCTGCACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGGTCAGGCTGAAGAACTaGCACCTGCCTTACGGCGAT +
Preference number: 5 (lower is better)
Translates to: QPALPHRCETTRSAPAMWVRLKN*HLPYGD
Trigger: ATCGCCGTAAGGCAGGTGCAAGTTCTTCAGCCTGAC...CCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTGCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425691.5
CDS-3UTR CAA 90 bp CGGTGCCTGCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAAGTGCGGGGAAAGCCATaGCTGGAATCATCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: RCLHAAYIQRAERGSPAEVRGKP*LESSLV
Trigger: GACGAGGGATGATTCCAGCAATGGCTTTCCCCGCAC...TTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCAGGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp CACCTCGCGGTAAATGTCGAACTCCTGGGCCAGCGTGTGGATCACCACGGACAGGTGCGGGGAAAGCCATaGCTGGAATCATCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: HLAVNVELLGQRVDHHGQVRGKP*LESSLV
Trigger: GACGAGGGATGATTCCAGCAATGGCTTTCCCCGCAC...CTGTCCGTGGTGATCCACACGCTGGCCCAGGAGTTCGACATTTACCGCGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415484.5
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
CDS-3UTR CAA 90 bp CACTGCCGCACCGCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCCCTGGGGTGGGTGATTaGAGTCTCAGTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: HCRTAVRRHVQHQPCGLSPGVGD*SLSFLI
Trigger: GATGAGGAAACTGAGACTCAAATCACCCACCCCAGG...GCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGCGGTGCGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS-3UTR CAA 90 bp GAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCTCGTTCCAGAGCTTAAGGAAAGCTTAGAGAAGTCTTaGGAAGCCTGGGTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: ERNEGPQQNRGLVPELKESLEKS*EAWVEG
Trigger: CCCCTCGACCCAGGCTTCCAAAGACTTCTCTAAGCT...TTCCTTAAGCTCTGGAACGAGCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp GCACGCAGCTTACATACAGAGAGCGGAACGAGGGTCCCCAGCAGAACAGGGGGCGTCAAAATACTTTCCTaGGAGGCCCCAGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: ARSLHTESGTRVPSRTGGVKILS*EAPGGR
Trigger: TCTCCCTCCTGGGGCCTCCAAGGAAAGTATTTTGAC...GCCCCCTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404953.7
ENST00000407689.8
CDS-3UTR CAA 90 bp TCGTCACAGGCACAGGCTCTCCGCCCACCTCGCGGTAAATGTCGAACTCCTGGGGTCAGGCTGAAGAACTaGCACCTTACGGCGATCCTA +
Preference number: 5 (lower is better)
Translates to: SSQAQALRPPRGKCRTPGVRLKN*HLTAIL
Trigger: TAGGATCGCCGTAAGGTGCAAGTTCTTCAGCCTGAC...CCCAGGAGTTCGACATTTACCGCGAGGTGGGCGGAGAGCCTGTGCCTGTGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440704.5
CDS TCA 90 bp GAGGACAATGAACCCAGCCTGTGCCAAAAACAAAGGATTCCACGGTaGGAGGGCCAGACCAGGGCATGGCTCAGACGACCCCACTGGAAA +
Preference number: 5 (lower is better)
Translates to: EDNEPSLCQKQRIPR*EGQTRAWLRRPHWK
Trigger: TTTCCAGTGGGGTCGTCTGAGCCATGCCCTGGTCTGGCCCTCTCACCGTGGAATCCTTTGTTTTTGGCACAGGCTGGGTTCATTGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463795.5
ENST00000497605.6
CDS GCA 90 bp ATGGCACATCACATGGGCTCCCAGGTACCTATATCCACCCTGCTCTaGATCAGCACCAGCAGGAAACTCACCAGGATGAAGTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: MAHHMGSQVPISTLL*ISTSRKLTRMKSVW
Trigger: CCAGACGGACTTCATCCTGGTGAGTTTCCTGCTGGTGCTGATGCAGAGCAGGGTGGATATAGGTACCTGGGAGCCCATGTGATGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492159.5
CDS GCA 90 bp ACTGATAGATGGGCGGAAAGTGGTGGGACAGAGTGTAGGGAACAGTaGTGTGAGGACAAAGACGAAGTTCCAAGGTCCACCTGTGCGAGT +
Preference number: 5 (lower is better)
Translates to: TDRWAESGGTECREQ*CEDKDEVPRSTCAS
Trigger: ACTCGCACAGGTGGACCTTGGAACTTCGTCTTTGTCCTCACAGCACTGTTCCCTACACTCTGTCCCACCACTTTCCGCCCATCTATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463795.5
ENST00000471480.6
ENST00000497605.6
CDS CCA 90 bp CAGGAACCCCAAGAGAGGACAAGCAAGAGGTGCAAAACTGATAGATaGGCGGAAAGTGGTGGGACAGAGTGTAGGGAACAGTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: QEPQERTSKRCKTDR*AESGGTECREQCCE
Trigger: CTCACAGCACTGTTCCCTACACTCTGTCCCACCACTTTCCGCCCATCTATCAGTTTTGCACCTCTTGCTTGTCCTCTCTTGGGGTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463795.5
ENST00000471480.6
ENST00000497605.6
CDS-3UTR CAA 90 bp AGCACAGACACGTGGTGCTCGGCCAGTGGCGCGATGACCGAACGGGCGATCTTGGTTCAAATCCCAGCTTaGTTAATTTGTCTTATGACC +
Preference number: 5 (lower is better)
Translates to: STDTWCSASGAMTERAILVQIPA*LICLMT
Trigger: GGTCATAAGACAAATTAACAAAGCTGGGATTTGAAC...CAAGATCGCCCGTTCGGTCATCGCGCCACTGGCCGAGCACCACGTGTCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS CCA 90 bp CCATGTGGCCTCAGCTACTTGCAGGAACTCAGATGGGGGCAGCTCTaGGTTCAAATCCCAGCTTTGTTAATTTGTCTTATGACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: PCGLSYLQELRWGQL*VQIPALLICLMTWG
Trigger: ACCCCAGGTCATAAGACAAATTAACAAAGCTGGGATTTGAACCCAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415484.5
CDS GCA 72 bp TGGCCCGGAGCGAGAGCAGAGCCCCCAGCCCCTATCTaGGCTCCCGAACCCGGGCGCGCACCGGCTGCGGCG +
Preference number: 6 (lower is better)
Translates to: WPGARAEPPAPI*APEPGRAPAAA
Trigger: CGCCGCAGCCGGTGCGCGCCCGGGTTCGGGAGCGCAGATAGGGGCTGGGGGCTCTGCTCTCGCTCCGGGCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425691.5
ENST00000440704.5
ENST00000498572.1
CDS GCA 72 bp GCGACGCTCAGCACCCGCACCCGGTGTTCTAGGATGTaGAGCTCCATCGCGGCTCGCGCGGACCCGACCCCG +
Preference number: 6 (lower is better)
Translates to: ATLSTRTRCSRM*SSIAARADPTP
Trigger: CGGGGTCGGGTCCGCGCGAGCCGCGATGGAGCTGCACATCCTAGAACACCGGGTGCGGGTGCTGAGCGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000404953.7
ENST00000421236.5
ENST00000425691.5
ENST00000440839.5
ENST00000463795.5
ENST00000471480.6
ENST00000497605.6
ENST00000498572.1
CDS CCA 72 bp TGCACCTGCCTTACGGCGATCCTAATCCTCCGACCCTaGCCCGGAGCGAGAGCAGAGCCCCCAGCCCCTATC +
Preference number: 6 (lower is better)
Translates to: CTCLTAILILRP*PGARAEPPAPI
Trigger: GATAGGGGCTGGGGGCTCTGCTCTCGCTCCGGGCCAGGGTCGGAGGATTAGGATCGCCGTAAGGCAGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425691.5
CDS GCA 72 bp CTGGGAAGGAGCTGGTATGGTGGCCTGGGCAGGCTCTaGCATATCTGCTACCCGCCCAAGGGTCCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: LGRSWYGGLGRL*HICYPPKGPAL
Trigger: GAGGGCTGGACCCTTGGGCGGGTAGCAGATATGGCAGAGCCTGCCCAGGCCACCATACCAGCTCCTTCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS GCA 72 bp GACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGCAGCTCGGCTGCGGCG +
Preference number: 6 (lower is better)
Translates to: DTFSTSHVASAT*RNSDGGSSAAA
Trigger: CGCCGCAGCCGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421236.5
ENST00000440839.5
ENST00000471480.6
ENST00000497605.6
CDS GCA 72 bp AGCTGGTATGGTGGCCTGGGCAGGCTCTGCCATATCTaGTACCCGCCCAAGGGTCCAGCCCTCTGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: SWYGGLGRLCHI*YPPKGPALWKV
Trigger: CACCTTCCAGAGGGCTGGACCCTTGGGCGGGTAGCAGATATGGCAGAGCCTGCCCAGGCCACCATACCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS GCA 72 bp TTTAGGGGCTCTACCAGGCACCCAGCCTACTGCCCCTaGTCCCGATCAGCCTCCAGAACCCTGGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: FRGSTRHPAYCP*SRSASRTLGRS
Trigger: GCTCCTTCCCAGGGTTCTGGAGGCTGATCGGGAGCAGGGGCAGTAGGCTGGGTGCCTGGTAGAGCCCCTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS CCA 72 bp AACTTGCACCTTACGGCGATCCTAATCCTCCGACCCTaGCCCGGAGCGAGAGCAGAGCCCCCAGCCCCTATC +
Preference number: 6 (lower is better)
Translates to: NLHLTAILILRP*PGARAEPPAPI
Trigger: GATAGGGGCTGGGGGCTCTGCTCTCGCTCCGGGCCAGGGTCGGAGGATTAGGATCGCCGTAAGGTGCAAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440704.5
CDS CCA 72 bp TCCAGTGTGAGGACACAGAAGCGGTTCTGTGGGCTCTaGATGGGATGCACCGTGGGGCTGGGCCCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: SSVRTQKRFCGL*MGCTVGLGPAG
Trigger: TCCAGCAGGGCCCAGCCCCACGGTGCATCCCATCCAGAGCCCACAGAACCGCTTCTGTGTCCTCACACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471480.6
CDS CCA 72 bp GTGTGGATCACCACGGACAGGTCCTGCTCCCGCACCTaGGCCACAGCAGATGGCACATCACATGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: VWITTDRSCSRT*ATADGTSHGLP
Trigger: TGGGAGCCCATGTGATGTGCCATCTGCTGTGGCCCAGGTGCGGGAGCAGGACCTGTCCGTGGTGATCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492159.5
CDS CCA 72 bp GAGGGCCAGACCAGGGCATGGCTCAGACGACCCCACTaGAAAGGGATCCAGCTTTGGGGCAAGAACCTTCCC +
Preference number: 6 (lower is better)
Translates to: EGQTRAWLRRPH*KGIQLWGKNLP
Trigger: GGGAAGGTTCTTGCCCCAAAGCTGGATCCCTTTCCAGTGGGGTCGTCTGAGCCATGCCCTGGTCTGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463795.5
ENST00000497605.6
CDS CCA 72 bp TGCTCCCGATCAGCCTCCAGAACCCTGGGAAGGAGCTaGTATGGTGGCCTGGGCAGGCTCTGCCATATCTGC +
Preference number: 6 (lower is better)
Translates to: CSRSASRTLGRS*YGGLGRLCHIC
Trigger: GCAGATATGGCAGAGCCTGCCCAGGCCACCATACCAGCTCCTTCCCAGGGTTCTGGAGGCTGATCGGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497605.6
CDS CCA 72 bp CTCCCGCACCTGGGCCACAGCAGATGGCACATCACATaGGCTCCCAGGTACCTATATCCACCCTGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: LPHLGHSRWHIT*APRYLYPPCSA
Trigger: TGCAGAGCAGGGTGGATATAGGTACCTGGGAGCCCATGTGATGTGCCATCTGCTGTGGCCCAGGTGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492159.5
CDS TCA 72 bp GAACCCAGCCTGTGCCAAAAACAAAGGATTCCACGGTaGGAGGGCCAGACCAGGGCATGGCTCAGACGACCC +
Preference number: 6 (lower is better)
Translates to: EPSLCQKQRIPR*EGQTRAWLRRP
Trigger: GGGTCGTCTGAGCCATGCCCTGGTCTGGCCCTCTCACCGTGGAATCCTTTGTTTTTGGCACAGGCTGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463795.5
ENST00000497605.6
CDS CAA 72 bp CGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGGCAGCTCTCACTACGG +
Preference number: 6 (lower is better)
Translates to: RHVQHQPCGLSY*QELRWGQLSLR
Trigger: CCGTAGTGAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464854.1
CDS CAA 72 bp CGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGGCAGCTCTTACGGCGA +
Preference number: 6 (lower is better)
Translates to: RHVQHQPCGLSY*QELRWGQLLRR
Trigger: TCGCCGTAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498572.1
CDS CAA 90 bp GCTGTGAGACGACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTaGCAGGAACTCAGATGGGGGCAGCTCTCACTACGGTGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: AVRRHVQHQPCGLSY*QELRWGQLSLRCLL
Trigger: CAGAAGACACCGTAGTGAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTCGTCTCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464854.1
CDS GCA 72 bp GACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGCAGCTCTCACTACGGT +
Preference number: 6 (lower is better)
Translates to: DTFSTSHVASAT*RNSDGGSSHYG
Trigger: ACCGTAGTGAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464854.1
CDS GCA 72 bp GACACGTTCAGCACCAGCCATGTGGCCTCAGCTACTTaGAGGAACTCAGATGGGGGCAGCTCTTACGGCGAT +
Preference number: 6 (lower is better)
Translates to: DTFSTSHVASAT*RNSDGGSSYGD
Trigger: ATCGCCGTAAGAGCTGCCCCCATCTGAGTTCCTGCAAGTAGCTGAGGCCACATGGCTGGTGCTGAACGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498572.1
CDS CCA 72 bp TGGCTCAGACGACCCCACTGGAAAGGGATCCAGCTTTaGGGCAAGAACCTTCCCCGAACATCAGTGAAGCAC +
Preference number: 6 (lower is better)
Translates to: WLRRPHWKGIQL*GKNLPRTSVKH
Trigger: GTGCTTCACTGATGTTCGGGGAAGGTTCTTGCCCCAAAGCTGGATCCCTTTCCAGTGGGGTCGTCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463795.5
ENST00000497605.6
CDS TCA 72 bp GGCAAGAACCTTCCCCGAACATCAGTGAAGCACAAGTaGGCATCATGGGCTGCCAGGAACCCCAAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: GKNLPRTSVKHK*ASWAARNPKRG
Trigger: TCCTCTCTTGGGGTTCCTGGCAGCCCATGATGCTCACTTGTGCTTCACTGATGTTCGGGGAAGGTTCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463795.5
ENST00000497605.6
CDS GCA 72 bp TGGGCGGAAAGTGGTGGGACAGAGTGTAGGGAACAGTaGTGTGAGGACAAAGACGAAGTTCCAAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: WAESGGTECREQ*CEDKDEVPRST
Trigger: GGTGGACCTTGGAACTTCGTCTTTGTCCTCACAGCACTGTTCCCTACACTCTGTCCCACCACTTTCCGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463795.5
ENST00000471480.6
ENST00000497605.6
CDS GCA 72 bp CCGAACATCAGTGAAGCACAAGTGAGCATCATGGGCTaGCAGGAACCCCAAGAGAGGACAAGCAAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: PNISEAQVSIMG*QEPQERTSKRC
Trigger: GCACCTCTTGCTTGTCCTCTCTTGGGGTTCCTGGCAGCCCATGATGCTCACTTGTGCTTCACTGATGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463795.5
ENST00000497605.6
CDS GCA 72 bp CACATGGGCTCCCAGGTACCTATATCCACCCTGCTCTaGATCAGCACCAGCAGGAAACTCACCAGGATGAAG +
Preference number: 6 (lower is better)
Translates to: HMGSQVPISTLL*ISTSRKLTRMK
Trigger: CTTCATCCTGGTGAGTTTCCTGCTGGTGCTGATGCAGAGCAGGGTGGATATAGGTACCTGGGAGCCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492159.5
CDS GCA 72 bp CACATCACATGGGCTCCCAGGTACCTATATCCACCCTaGTCTGCATCAGCACCAGCAGGAAACTCACCAGGA +
Preference number: 6 (lower is better)
Translates to: HITWAPRYLYPP*SASAPAGNSPG
Trigger: TCCTGGTGAGTTTCCTGCTGGTGCTGATGCAGAGCAGGGTGGATATAGGTACCTGGGAGCCCATGTGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492159.5
CDS CCA 72 bp CTCAGATGGGGGCAGCTCTCACTACGGTGTCTTCTGTaGGTTAGCAGAAGCTTTGTACCACATGGCACCACC +
Preference number: 6 (lower is better)
Translates to: LRWGQLSLRCLL*VSRSFVPHGTT
Trigger: GGTGGTGCCATGTGGTACAAAGCTTCTGCTAACCCACAGAAGACACCGTAGTGAGAGCTGCCCCCATCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464854.1
CDS CCA 72 bp CAAGAGAGGACAAGCAAGAGGTGCAAAACTGATAGATaGGCGGAAAGTGGTGGGACAGAGTGTAGGGAACAG +
Preference number: 6 (lower is better)
Translates to: QERTSKRCKTDR*AESGGTECREQ
Trigger: CTGTTCCCTACACTCTGTCCCACCACTTTCCGCCCATCTATCAGTTTTGCACCTCTTGCTTGTCCTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463795.5
ENST00000471480.6
ENST00000497605.6