RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASS4 (Homo sapiens)

Ensembl gene IDs: ENSG00000087589

Ensembl transcript IDs: ENST00000360314.7, ENST00000434344.2, ENST00000497244.1, ENST00000679529.1, ENST00000679887.1

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTaGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGT +
Preference number: 1 (lower is better)
Translates to: YLTLFPDPLRGKSMP*GCLATWYYQLWAPG
Trigger: ACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR CCA 90 bp AAGTCAATGCCCTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTaGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGG +
Preference number: 1 (lower is better)
Translates to: KSMPWGCLATWYYQL*APGLFQLIGVCPGW
Trigger: CCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAGGGCATTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR CCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTaGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACA +
Preference number: 1 (lower is better)
Translates to: HLVLPALGTRSVSAH*CMPRLAFPIGQSCT
Trigger: TGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR TCA 90 bp CATACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTaGCTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: HTPYMLNFTRSLPHT*LSFLTPCGVSQCPG
Trigger: CCCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR TCA 90 bp CCTAGAACTTGGCATGTAGTAGGCATCCAATACATAAGTGTTAAATaGGTGAATTTAAAACACGTACATGCCAGGAATGGTGGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: PRTWHVVGIQYISVK*VNLKHVHARNGGSG
Trigger: GCCTGAGCCACCATTCCTGGCATGTACGTGTTTTAAATTCACTCATTTAACACTTATGTATTGGATGCCTACTACATGCCAAGTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
3UTR-3UTR TCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAAGGCGGGGGATGGCCTaGGGTCAGGAGTTCCAGACC +
Preference number: 2 (lower is better)
Translates to: KFQEGKPSETLLCLQHLERRGMA*GQEFQT
Trigger: GGTCTGGAACTCCTGACCTCAGGCCATCCCCCGCCT...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
3UTR CAA 90 bp CCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATaGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCAC +
Preference number: 2 (lower is better)
Translates to: PLGTTSFGHQVCFSS*VYAPAGFSHRAELH
Trigger: GTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR-3UTR GCA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCCCCATAGGGCAGAGTTaGACAAGTTGTGGGTGTGAA +
Preference number: 2 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGPIGQS*TSCGCE
Trigger: TTCACACCCACAACTTGTGCAACTCTGCCCTATGGG...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR-3UTR GCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAACTGAGGCGGGAGAATTaGTTCAACCCAGAAGGCGGA +
Preference number: 2 (lower is better)
Translates to: KFQEGKPSETLLCLQHLELRREN*FNPEGG
Trigger: TCCGCCTTCTGGGTTGAAGCAATTCTCCCGCCTCAG...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
3UTR CCA 72 bp CTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTaGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAG +
Preference number: 3 (lower is better)
Translates to: LPALGTRSVSAH*CMPRLAFPIGQ
Trigger: CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR CCA 72 bp CTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTaGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: LFPDPLRGKSMP*GCLATWYYQLW
Trigger: CCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR CCA 72 bp CGGGGTAAGTCAATGCCCTGGGGTTGCTTAGCCACTTaGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: RGKSMPWGCLAT*YYQLWAPGLFQ
Trigger: CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAGGGCATTGACTTACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR-3UTR CAA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAGTCTGTTTCAGCTCATaGGTGTATGCCCCGGCTGGC +
Preference number: 3 (lower is better)
Translates to: KFQEGKPSETLLCLQHLEVCFSS*VYAPAG
Trigger: GCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
3UTR TCA 72 bp TATATGCTAAACTTCACAAGGTCTTTACCTCATACCTaGCTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAA +
Preference number: 3 (lower is better)
Translates to: YMLNFTRSLPHT*LSFLTPCGVSQ
Trigger: TTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGCAGAGTCGGCAGTaGGGCCCGGACAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHRQSRQ*GPDRSG
Trigger: CCCAGACCTGTCCGGGCCTCACTGCCGACTCTGCCT...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGGGCAGTAGGGGGCTaGGGCCCCTCCGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEWAVGG*GPSAQL
Trigger: GAGTTGGGCGGAGGGGCCCCAGCCCCCTACTGCCCA...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGAGGCAGAGTCGGCAGTaGGGCCCGGACAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKRQSRQ*GPDRSG
Trigger: CCCAGACCTGTCCGGGCCTCACTGCCGACTCTGCCT...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGCGGGCTGGCTGCTGCTaGGGCTGCCGTGAAATGCGC +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAERAGCC*GCREMR
Trigger: GCGCATTTCACGGCAGCCTCAGCAGCAGCCAGCCCG...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTTCTCAGCCTCCGCCTaGAGGTGCCCCAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSFSASA*RCPSAA
Trigger: TGCCGCGCTGGGGCACCTCCAGGCGGAGGCTGAGAA...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTCGGGCTGGCTGCTGCTaGGGCTGCCGTGAAATGCGC +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGRAGCC*GCREMR
Trigger: GCGCATTTCACGGCAGCCTCAGCAGCAGCCAGCCCG...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGAGGCGGGGGATGGCCTaGGGTCAGGAGTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAERRGMA*GQEFQT
Trigger: GGTCTGGAACTCCTGACCTCAGGCCATCCCCCGCCT...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTGGATTTGGAGGCGGTTaGCAGGGGCCAGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSGFGGG*QGPGLA
Trigger: GGCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCC...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGCAGGCCTCTCAGGAATaGGGGGCACGGCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWQASQE*GARPVC
Trigger: GCAGACAGGCCGTGCCCCCCATTCCTGAGAGGCCTG...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGCAGGCCTCTCAGGAATaGGGGGCACGGCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEQASQE*GARPVC
Trigger: GCAGACAGGCCGTGCCCCCCATTCCTGAGAGGCCTG...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGACGGGGCCCCGGTGCTaGGTAGGCACGTCATACACC +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKTGPRC*VGTSYT
Trigger: GGTGTATGACGTGCCTACCCAGCACCGGGGCCCCGT...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCATGATCTCCGCGGGCTaGCTGCTGCTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCMISAG*LLLRLP
Trigger: CGGCAGCCTCAGCAGCAGCCAGCCCGCGGAGATCAT...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGATGATCTCCGCGGGCTaGCTGCTGCTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEMISAG*LLLRLP
Trigger: CGGCAGCCTCAGCAGCAGCCAGCCCGCGGAGATCAT...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCATTCTCAGCCTCCGCCTaGAGGTGCCCCAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSFSASA*RCPSAA
Trigger: TGCCGCGCTGGGGCACCTCCAGGCGGAGGCTGAGAA...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTCCCTTCATGTCGGTaGTGTGGAGCAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGFPSCR*CGAAPL
Trigger: CAGGGGAGCTGCTCCACATCACCGACATGAAGGGAA...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGAGGCAGAGTCGGCAGTaGGGCCCGGACAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMRQSRQ*GPDRSG
Trigger: CCCAGACCTGTCCGGGCCTCACTGCCGACTCTGCCT...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGGCTGGCTGCTGCTaGGGCTGCCGTGAAATGCGC +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPRAGCC*GCREMR
Trigger: GCGCATTTCACGGCAGCCTCAGCAGCAGCCAGCCCG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTAGCAGGCTGCAGAGGTaGCTGCTGCCACGGAGGATC +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSSRLQR*LLPRRI
Trigger: GATCCTCCGTGGCAGCAGTCACCTCTGCAGCCTGCT...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCAGCAGGCTGCAGAGGTaGCTGCTGCCACGGAGGATC +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCSRLQR*LLPRRI
Trigger: GATCCTCCGTGGCAGCAGTCACCTCTGCAGCCTGCT...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTCCAGCGCTACGTCCTTaGGCAGGCTGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCPALRP*AGCRGD
Trigger: GTCACCTCTGCAGCCTGCTCAAGGACGTAGCGCTGG...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGGGGCACGGCCTGTCTaGAGCGACCTCCGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSGARPV*SDLRED
Trigger: ATCCTCACGGAGGTCGCTGCAGACAGGCCGTGCCCC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGGGGGCACGGCCTGTCTaGAGCGACCTCCGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLGARPV*SDLRED
Trigger: ATCCTCACGGAGGTCGCTGCAGACAGGCCGTGCCCC...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTACCACGGGGCCCCGGTaGTGGGTAGGCACGTCATAC +
Preference number: 4 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCTTGPR*WVGTSY
Trigger: GTATGACGTGCCTACCCAGCACCGGGGCCCCGTGGT...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTACCACGGGGCCCCGGTaGTGGGTAGGCACGTCATAC +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGTTGPR*WVGTSY
Trigger: GTATGACGTGCCTACCCAGCACCGGGGCCCCGTGGT...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCAGTGTCCCTCTGAACTaGCGCGTGTGTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGSVPLN*RVCCSS
Trigger: GCTGGAGCAACACACGCGGCAGTTCAGAGGGACACT...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGGATTTGGAGGCGGTTaGCAGGGGCCAGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSGFGGG*QGPGLA
Trigger: GGCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCC...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAACCTCCGTGAGGATTTaGAGGCGGTTGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCETSVRI*RRLAGA
Trigger: GGCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGT...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGACCTCCGTGAGGATTTaGAGGCGGTTGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKTSVRI*RRLAGA
Trigger: GGCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGT...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGAAACGGGGCCTGGAGTaGGAGGGCGGGGTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLKRGLE*EGGVEW
Trigger: CCACTCTACCCCGCCCTCCCACTCCAGGCCCCGTTT...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGGCAGTAGGGGGCTaGGGCCCCTCCGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHWAVGG*GPSAQL
Trigger: GAGTTGGGCGGAGGGGCCCCAGCCCCCTACTGCCCA...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGTGGAGGAGTCGTCGGTaGATGTGGTGGAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWWRSRR*MWWSTR
Trigger: CCTCGTGCTCCACCACATCCACCGACGACTCCTCCA...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATCCTCCGAGGAAGAGCTaGAGGAGTCGTCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHPPRKS*RSRRWM
Trigger: CATCCACCGACGACTCCTCCAGCTCTTCCTCGGAGG...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTCGCACGTCCCTCTCCTaGGTCTCCATGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCRTSLS*VSMHSV
Trigger: CACGCTGTGCATGGAGACCCAGGAGAGGGACGTGCG...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTCTGCAGCGACCTCCGTaGGGATTTGGAGGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSLQRPP*GFGGGW
Trigger: CCAACCGCCTCCAAATCCTCACGGAGGTCGCTGCAG...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCCCAGCGCTACGTCCTTaGGCAGGCTGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLPALRP*AGCRGD
Trigger: GTCACCTCTGCAGCCTGCTCAAGGACGTAGCGCTGG...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGAGGCGGGGGATGGCCTaGGGTCAGGAGTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMRRGMA*GQEFQT
Trigger: GGTCTGGAACTCCTGACCTCAGGCCATCCCCCGCCT...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCACGGAGGATCTCGTTaGGCACGTCCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPHGGSR*ARPSPG
Trigger: CCCAGGAGAGGGACGTGCGCAACGAGATCCTCCGTG...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTCACGGAGGATCTCGTTaGGCACGTCCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCHGGSR*ARPSPG
Trigger: CCCAGGAGAGGGACGTGCGCAACGAGATCCTCCGTG...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAGGGCGGGGTAGAGTaGGCACCTGATAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCEGGVE*APDRSP
Trigger: AGGAGACCTATCAGGTGCCCACTCTACCCCGCCCTC...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGAGGGCGGGGTAGAGTaGGCACCTGATAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEEGGVE*APDRSP
Trigger: AGGAGACCTATCAGGTGCCCACTCTACCCCGCCCTC...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATGGCACGTCATACACCTaGGAAGGCAGAGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHGTSYT*EGRVGS
Trigger: ACTGCCGACTCTGCCTTCCCAGGTGTATGACGTGCC...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGGCTGTCTGGGGGATaGAGTCCTGCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEWLSGG*SPAFLG
Trigger: CCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCA...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAAAGTGGAGCTGGAACTaGGGAGAGCGTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEKWSWN*GERGAL
Trigger: CAAGGCCCCACGCTCTCCCCAGTTCCAGCTCCACTT...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCTGGAGGAGTCGTCGGTaGATGTGGTGGAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCWRSRR*MWWSTR
Trigger: CCTCGTGCTCCACCACATCCACCGACGACTCCTCCA...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGCGCACGTCCCTCTCCTaGGTCTCCATGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLRTSLS*VSMHSV
Trigger: CACGCTGTGCATGGAGACCCAGGAGAGGGACGTGCG...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTTCTCAGCCTCCGCCTaGAGGTGCCCCAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHFSASA*RCPSAA
Trigger: TGCCGCGCTGGGGCACCTCCAGGCGGAGGCTGAGAA...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGGTGGAGCAGCTCCCCTaGGCTCTGCAGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQVEQLP*ALQLVS
Trigger: AGATACTAGCTGCAGAGCTCAGGGGAGCTGCTCCAC...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTGTGGAGCAGCTCCCCTaGGCTCTGCAGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSVEQLP*ALQLVS
Trigger: AGATACTAGCTGCAGAGCTCAGGGGAGCTGCTCCAC...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGATGTCCCCTCTGCTaGAAGCCAGCTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCGCPLC*KPARQS
Trigger: GCTCTGACGAGCTGGCTTTCAGCAGAGGGGACATCC...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGGATGTCCCCTCTGCTaGAAGCCAGCTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSGCPLC*KPARQS
Trigger: GCTCTGACGAGCTGGCTTTCAGCAGAGGGGACATCC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGGGATGTCCCCTCTGCTaGAAGCCAGCTCGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLGCPLC*KPARQS
Trigger: GCTCTGACGAGCTGGCTTTCAGCAGAGGGGACATCC...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCTGCAGCGACCTCCGTaGGGATTTGGAGGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMLQRPP*GFGGGW
Trigger: CCAACCGCCTCCAAATCCTCACGGAGGTCGCTGCAG...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGAGAGCGTGGGGCCTTaGTTCTTCCGCAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWESVGP*FFRKAG
Trigger: ACCAGCTTTGCGGAAGAATCAAGGCCCCACGCTCTC...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTGCCCGCGGAATTCTCTaGCACCTCCTTGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSARGIL*HLLGFL
Trigger: GAGAAAGCCAAGGAGGTGTCAGAGAATTCCGCGGGC...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGGCCCGCGGAATTCTCTaGCACCTCCTTGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEARGIL*HLLGFL
Trigger: GAGAAAGCCAAGGAGGTGTCAGAGAATTCCGCGGGC...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGGGAGAGCTCCTTTGCTaGCTCCTCCGAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKGELLC*LLRGRA
Trigger: AGCTCTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCC...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGGGCCAGCGACAGAGCTaGCCACCTTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMGQRQS*PPCAAE
Trigger: CTCTGCAGCACAAGGTGGTCAGCTCTGTCGCTGGCC...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGAGCAGGCTGCAGAGGTaGCTGCTGCCACGGAGGATC +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMSRLQR*LLPRRI
Trigger: GATCCTCCGTGGCAGCAGTCACCTCTGCAGCCTGCT...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCAGCGCTACGTCCTTaGGCAGGCTGCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMPALRP*AGCRGD
Trigger: GTCACCTCTGCAGCCTGCTCAAGGACGTAGCGCTGG...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATACCACGGGGCCCCGGTaGTGGGTAGGCACGTCATAC +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHTTGPR*WVGTSY
Trigger: GTATGACGTGCCTACCCAGCACCGGGGCCCCGTGGT...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGAACACCCTGCCCACTTaGTTGGCTGTCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAENTLPT*LAVWGM
Trigger: CATCCCCCAGACAGCCAAGCAAGTGGGCAGGGTGTT...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGCAGAGGTGACTGCTaGCACGGAGGATCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAECRGDC*HGGSRC
Trigger: GCAACGAGATCCTCCGTGGCAGCAGTCACCTCTGCA...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCACCAGAAGGCGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSPEGGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGCCTTCTGG...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATGGATTTGGAGGCGGTTaGCAGGGGCCAGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHGFGGG*QGPGLA
Trigger: GGCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCC...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGAAACGGGGCCTGGAGTaGGAGGGCGGGGTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMKRGLE*EGGVEW
Trigger: CCACTCTACCCCGCCCTCCCACTCCAGGCCCCGTTT...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATACGGGGCCCCGGTGCTaGGTAGGCACGTCATACACC +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHTGPRC*VGTSYT
Trigger: GGTGTATGACGTGCCTACCCAGCACCGGGGCCCCGT...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAACGGGGCCCCGGTGCTaGGTAGGCACGTCATACACC +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLETGPRC*VGTSYT
Trigger: GGTGTATGACGTGCCTACCCAGCACCGGGGCCCCGT...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGCGTCGGTGGATGTGGTaGAGCACGAGGAAACGATGC +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKRRWMW*STRKRC
Trigger: GCATCGTTTCCTCGTGCTCCACCACATCCACCGACG...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGTCGTCGGTGGATGTaGTGGAGCACGAGGAAACGA +
Preference number: 4 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHSRRWM*WSTRKR
Trigger: TCGTTTCCTCGTGCTCCACCACATCCACCGACGACT...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAATGATCTCCGCGGGCTaGCTGCTGCTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLEMISAG*LLLRLP
Trigger: CGGCAGCCTCAGCAGCAGCCAGCCCGCGGAGATCAT...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGCTGCAGCGACCTCCGTaGGGATTTGGAGGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRLQRPP*GFGGGW
Trigger: CCAACCGCCTCCAAATCCTCACGGAGGTCGCTGCAG...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGCTGATAGGTCTCCTCTaGGCTGGCAGGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQLIGLL*AGRSFF
Trigger: GAAGAAGCTCCTGCCAGCTCAGAGGAGACCTATCAG...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAACAGGTCTGGGAAGCGTaGGGATGGCCTGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEQVWEA*GWPVLE
Trigger: TTCCAAAACAGGCCATCCTCACGCTTCCCAGACCTG...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGCAGGTCTGGGAAGCGTaGGGATGGCCTGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKQVWEA*GWPVLE
Trigger: TTCCAAAACAGGCCATCCTCACGCTTCCCAGACCTG...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTGAGAGCGTGGGGCCTTaGTTCTTCCGCAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGESVGP*FFRKAG
Trigger: ACCAGCTTTGCGGAAGAATCAAGGCCCCACGCTCTC...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGCCAGCGACAGAGCTaGCCACCTTGTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CLATWYYQLWAPGLFQLIGQRQS*PPCAAE
Trigger: CTCTGCAGCACAAGGTGGTCAGCTCTGTCGCTGGCC...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGCTGCTGAGGCTGCCGTaGAATGCGCTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLLLRLP*NALMAL
Trigger: CAAAGCCATCAGCGCATTTCACGGCAGCCTCAGCAG...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCACTGCTGAGGCTGCCGTaGAATGCGCTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSLLRLP*NALMAL
Trigger: CAAAGCCATCAGCGCATTTCACGGCAGCCTCAGCAG...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTATGACCAGCTTGCTCTaGGTGATGATCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGMTSLL*VMISAG
Trigger: GCCCGCGGAGATCATCACTCAGAGCAAGCTGGTCAT...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATGACCAGCTTGCTCTaGGTGATGATCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLMTSLL*VMISAG
Trigger: GCCCGCGGAGATCATCACTCAGAGCAAGCTGGTCAT...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGATCCCAGTGTCCCTCTaGACTGCCGCGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLIPVSL*TAACVA
Trigger: AGCAACACACGCGGCAGTTCAGAGGGACACTGGGAT...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTCTTTACCTCATACCTaGCTCTCTTTCCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGSLPHT*LSFLTP
Trigger: GGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGA...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTAACACCCTGCCCACTTaGTTGGCTGTCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSNTLPT*LAVWGM
Trigger: CATCCCCCAGACAGCCAAGCAAGTGGGCAGGGTGTT...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTTCTCCTGGGTCTCCATaGACAGCGTGTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCSPGSP*TACPPA
Trigger: AGCTGGTGGACACGCTGTGCATGGAGACCCAGGAGA...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGCACGGAGGATCTCGTTaGGCACGTCCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRHGGSR*ARPSPG
Trigger: CCCAGGAGAGGGACGTGCGCAACGAGATCCTCCGTG...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGCAGAGGTGACTGCTaGCACGGAGGATCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLCRGDC*HGGSRC
Trigger: GCAACGAGATCCTCCGTGGCAGCAGTCACCTCTGCA...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGTGCAGAGGTGACTGCTaGCACGGAGGATCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQCRGDC*HGGSRC
Trigger: GCAACGAGATCCTCCGTGGCAGCAGTCACCTCTGCA...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAGTGTCCCTCTGAACTaGCGCGTGTGTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGSVPLN*RVCCSS
Trigger: GCTGGAGCAACACACGCGGCAGTTCAGAGGGACACT...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGCAGCTCATTGGTGTATaGCCCGGCTGGCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKQLIGV*PGWLFP
Trigger: TGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTG...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTCAATGCCCTGGGGTTaGTTAGCCACTTGGTACTAC +
Preference number: 4 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGSMPWG*LATWYY
Trigger: GTAGTACCAAGTGGCTAAGCAACCCCAGGGCATTGA...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGTCTTTCCTGACCCCCTaGGGGGTAAGTCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAESFLTP*GVSQCP
Trigger: AGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGA...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCAGAAGGCGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPPEGGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGCCTTCTGG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTCTGAGGCGGGAGAATTaGTTCAACCCAGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSLRREN*FNPEGG
Trigger: TCCGCCTTCTGGGTTGAAGCAATTCTCCCGCCTCAG...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGTTCATGTCGGTGATGTaGAGCAGCTCCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAEFMSVM*SSSPEL
Trigger: GAGCTCAGGGGAGCTGCTCCACATCACCGACATGAA...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTTTCATGTCGGTGATGTaGAGCAGCTCCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCFMSVM*SSSPEL
Trigger: GAGCTCAGGGGAGCTGCTCCACATCACCGACATGAA...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGTCATAAAGTGCCCTaGCCAGGAGTGCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLCHKVP*PGVPWA
Trigger: CGCCCAAGGCACTCCTGGCCAGGGCACTTTATGACA...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGGGAGTCCTGCCTTCTTaGGGCTGGCTGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQGVLPS*GWLVCH
Trigger: ATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCC...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTGGAGTCCTGCCTTCTTaGGGCTGGCTGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSGVLPS*GWLVCH
Trigger: ATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCC...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCTGGCTGTCTGGGGGATaGAGTCCTGCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPWLSGG*SPAFLG
Trigger: CCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCA...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGAACTGGGGAGAGCGTaGGGCCTTGATTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSELGRA*GLDSSA
Trigger: TGCGGAAGAATCAAGGCCCCACGCTCTCCCCAGTTC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGGAACTGGGGAGAGCGTaGGGCCTTGATTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQELGRA*GLDSSA
Trigger: TGCGGAAGAATCAAGGCCCCACGCTCTCCCCAGTTC...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTCCGGTTCAGGAGATaGGGAAGTTGTCCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWVRFRR*GSCPSG
Trigger: TCCAGACGGACAACTTCCCCATCTCCTGAACCGGAC...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGTCCGGTTCAGGAGATaGGGAAGTTGTCCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCVRFRR*GSCPSG
Trigger: TCCAGACGGACAACTTCCCCATCTCCTGAACCGGAC...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCGTCGGTGGATGTGGTaGAGCACGAGGAAACGATGC +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPRRWMW*STRKRC
Trigger: GCATCGTTTCCTCGTGCTCCACCACATCCACCGACG...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTAGTCGTCGGTGGATGTaGTGGAGCACGAGGAAACGA +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSSRRWM*WSTRKR
Trigger: TCGTTTCCTCGTGCTCCACCACATCCACCGACGACT...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCTCCGAGGAAGAGCTaGAGGAGTCGTCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPPPRKS*RSRRWM
Trigger: CATCCACCGACGACTCCTCCAGCTCTTCCTCGGAGG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATCGCACGTCCCTCTCCTaGGTCTCCATGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHRTSLS*VSMHSV
Trigger: CACGCTGTGCATGGAGACCCAGGAGAGGGACGTGCG...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGTCTGTTTCAGCTCATTaGTGTATGCCCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWSVSAH*CMPRLA
Trigger: AGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR CAA 72 bp ACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATaGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTSFGHQVCFSS*VYAPAGFSHRA
Trigger: TGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCTGGGCGCACAGTCCATaGTGCCTGTTCCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPWAHSP*CLFPSC
Trigger: ACATGAAGGGAACAGGCATCATGGACTGTGCGCCCA...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTTGGGCGCACAGTCCATaGTGCCTGTTCCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGWAHSP*CLFPSC
Trigger: ACATGAAGGGAACAGGCATCATGGACTGTGCGCCCA...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCACTGATAGGTCTCCTCTaGGCTGGCAGGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSLIGLL*AGRSFF
Trigger: GAAGAAGCTCCTGCCAGCTCAGAGGAGACCTATCAG...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTATTCAGTTGTGGAGTaGGGGACCTGGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSYSVVE*GTWICH
Trigger: GTGGCAGATCCAGGTCCCTCACTCCACAACTGAATA...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAGCTCCTTCCCAGCCTaGGAAACACTCGACGTTGCT +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGSSFPA*ETLDVA
Trigger: AGCAACGTCGAGTGTTTCTCAGGCTGGGAAGGAGCT...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCGTCTGGAGAACCATaGGGAATTATGGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPPSGEP*GIMARG
Trigger: TCCGCGGGCCATAATTCCTCATGGTTCTCCAGACGG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGATCTCCACTTCCTGCTaGCAAAGAGCATCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAEISTSC*QRASGQ
Trigger: CTGGCCTGATGCTCTTTGTCAGCAGGAAGTGGAGAT...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGGAGCTGACCACCTTGTaGTGCAGAGCCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLELTTL*CRAITV
Trigger: GACAGTGATGGCTCTGCAGCACAAGGTGGTCAGCTC...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCGAGCTGACCACCTTGTaGTGCAGAGCCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLELTTL*CRAITV
Trigger: GACAGTGATGGCTCTGCAGCACAAGGTGGTCAGCTC...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCGAGGCTGCCGTGAAATaGGCTGATGGCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCEAAVK*ADGFEE
Trigger: CTCTTCAAAGCCATCAGCGCATTTCACGGCAGCCTC...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGAGGCTGCCGTGAAATaGGCTGATGGCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWEAAVK*ADGFEE
Trigger: CTCTTCAAAGCCATCAGCGCATTTCACGGCAGCCTC...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGTCTCCTGGGTCTCCATaGACAGCGTGTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMSPGSP*TACPPA
Trigger: AGCTGGTGGACACGCTGTGCATGGAGACCCAGGAGA...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCAGCTCATTGGTGTATaGCCCGGCTGGCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPQLIGV*PGWLFP
Trigger: TGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTG...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCAGCTCATTGGTGTATaGCCCGGCTGGCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQQLIGV*PGWLFP
Trigger: TGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTG...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTGAGGCGGGAGAATTaGTTCAACCCAGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQLRREN*FNPEGG
Trigger: TCCGCCTTCTGGGTTGAAGCAATTCTCCCGCCTCAG...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTTCATGTCGGTGATGTaGAGCAGCTCCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLFMSVM*SSSPEL
Trigger: GAGCTCAGGGGAGCTGCTCCACATCACCGACATGAA...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCTGTCATAAAGTGCCCTaGCCAGGAGTGCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPCHKVP*PGVPWA
Trigger: CGCCCAAGGCACTCCTGGCCAGGGCACTTTATGACA...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTACTTGCTTGGCTGTCTaGGGGATGGAGTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSTCLAV*GMESCL
Trigger: AAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGT...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGACTTGCTTGGCTGTCTaGGGGATGGAGTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQTCLAV*GMESCL
Trigger: AAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGT...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAAAGTGGAGCTGGAACTaGGGAGAGCGTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLEKWSWN*GERGAL
Trigger: CAAGGCCCCACGCTCTCCCCAGTTCCAGCTCCACTT...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679887.1
CDS-3UTR CCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCTGTAGAAAGTGGAGCTaGAACTGGGGAGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLCRKWS*NWGERG
Trigger: CCCACGCTCTCCCCAGTTCCAGCTCCACTTTCTACA...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCCTCTGCTGTCAGAACTaGAACCTGATAATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGLCCQN*NLIICP
Trigger: CGGACAGATTATCAGGTTCCAGTTCTGACAGCAGAG...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGTTACAGGCAGTCCCATaGACTCCTCGGGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQLQAVP*TPRAKS
Trigger: GGATTTTGCCCGAGGAGTCCATGGGACTGCCTGTAA...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCGGTAGGAGTTGGAGATaGTCTGCATCTGGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCGRSWR*SASGPE
Trigger: TTCGGGACCAGATGCAGACCATCTCCAACTCCTACC...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCCCTCTCAAGGTCATCTaGGCTGTTCTGGACACTGTC +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCPLKVI*AVLDTV
Trigger: GACAGTGTCCAGAACAGCCCAGATGACCTTGAGAGG...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTCCTCTCAAGGTCATCTaGGCTGTTCTGGACACTGTC +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCPLKVI*AVLDTV
Trigger: GACAGTGTCCAGAACAGCCCAGATGACCTTGAGAGG...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGCCTCTTGATGTCTTCTaGAAGCATCCGTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWPLDVF*KHPCHH
Trigger: ATGGTGGCACGGATGCTTCCAGAAGACATCAAGAGG...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGTCTGTTTCAGCTCATTaGTGTATGCCCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAESVSAH*CMPRLA
Trigger: AGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGGTAAGTCAATGCCCTaGGGTTGCTTAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEGKSMP*GCLATW
Trigger: CCAAGTGGCTAAGCAACCCCAGGGCATTGACTTACC...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGGGTAAGTCAATGCCCTaGGGTTGCTTAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEGKSMP*GCLATW
Trigger: CCAAGTGGCTAAGCAACCCCAGGGCATTGACTTACC...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
3UTR CAA 72 bp GCCCTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTaGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: ALGLLSHLVLPA*GTRSVSAHWCM
Trigger: CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGGTGGAGCAGCTCCCCTaGGCTCTGCAGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMVEQLP*ALQLVS
Trigger: AGATACTAGCTGCAGAGCTCAGGGGAGCTGCTCCAC...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGGAGTCTTTTCACAGATaGTTCTGGCACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAEESFHR*FWHWWE
Trigger: CTCCCACCAGTGCCAGAATCATCTGTGAAAAGACTC...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTATTCAGTTGTGGAGTaGGGGACCTGGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSYSVVE*GTWICH
Trigger: GTGGCAGATCCAGGTCCCTCACTCCACAACTGAATA...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTCCGTCTGGAGAACCATaGGGAATTATGGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: CLATWYYQLWAPGLFQLIPSGEP*GIMARG
Trigger: TCCGCGGGCCATAATTCCTCATGGTTCTCCAGACGG...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGGAAGGTTACTGTCAGTaGGGTTACAGGCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEEGYCQ*GYRQSH
Trigger: ATGGGACTGCCTGTAACCTCACTGACAGTAACCTTC...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCTGGAGGCAAACCTCTTaGTGTCTTCTGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCWRQTS*CLLEAS
Trigger: GGATGCTTCCAGAAGACATCAAGAGGTTTGCCTCCA...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATATGACCAGCTTGCTCTaGGTGATGATCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHMTSLL*VMISAG
Trigger: GCCCGCGGAGATCATCACTCAGAGCAAGCTGGTCAT...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGATCCCAGTGTCCCTCTaGACTGCCGCGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRIPVSL*TAACVA
Trigger: AGCAACACACGCGGCAGTTCAGAGGGACACTGGGAT...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTATCCCAGTGTCCCTCTaGACTGCCGCGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CLATWYYQLWAPGLFQLIIPVSL*TAACVA
Trigger: AGCAACACACGCGGCAGTTCAGAGGGACACTGGGAT...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGAGAGGGCAAGCCCTCTaGAACACTGCTATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQRGQAL*NTAMSP
Trigger: TGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCT...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATCAGGTCTGGGAAGCGTaGGGATGGCCTGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHQVWEA*GWPDRS
Trigger: AGACCTATCAGGCCATCCTCACGCTTCCCAGACCTG...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679529.1
CDS-3UTR GCA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCGGTATGTCATATAACTaGTGCTTCTCTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGGMSYN*CFSGSF
Trigger: GAAGGAGCCAGAGAAGCAGCAGTTATATGACATACC...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAATCTCCTGGGTCTCCATaGACAGCGTGTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLESPGSP*TACPPA
Trigger: AGCTGGTGGACACGCTGTGCATGGAGACCCAGGAGA...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGCCCATAGGGCAGAGTTaGACAAGTTGTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAEPIGQS*TSCGCE
Trigger: TTCACACCCACAACTTGTGCAACTCTGCCCTATGGG...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGTCATAAAGTGCCCTaGCCAGGAGTGCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHCHKVP*PGVPWA
Trigger: CGCCCAAGGCACTCCTGGCCAGGGCACTTTATGACA...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCGTGTTGCTCCAGAATaGTCAGGATGTCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMRVAPE*SGCPLC
Trigger: GCAGAGGGGACATCCTGACCATTCTGGAGCAACACG...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGTGTTGCTCCAGAATaGTCAGGATGTCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPRVAPE*SGCPLC
Trigger: GCAGAGGGGACATCCTGACCATTCTGGAGCAACACG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCCAACCCTCGCTTTCTaGCACGTGTTGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQPTLAF*HVLLQN
Trigger: ATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGG...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCCAACCCTCGCTTTCTaGCACGTGTTGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPPTLAF*HVLLQN
Trigger: ATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGG...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGCACGTCATACACCTaGGAAGGCAGAGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRGTSYT*EGRVGS
Trigger: ACTGCCGACTCTGCCTTCCCAGGTGTATGACGTGCC...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGTGTAGAAAGTGGAGCTaGAACTGGGGAGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMCRKWS*NWGERG
Trigger: CCCACGCTCTCCCCAGTTCCAGCTCCACTTTCTACA...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGAGGATTGTAGAAAGTaGAGCTGGAACTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEEDCRK*SWNWGE
Trigger: CTCTCCCCAGTTCCAGCTCCACTTTCTACAATCCTC...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAACCATGAGGAATTATaGCCCGCGGAATTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHNHEEL*PAEFSD
Trigger: GTCAGAGAATTCCGCGGGCCATAATTCCTCATGGTT...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCATTACAGGCAGTCCCATaGACTCCTCGGGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSLQAVP*TPRAKS
Trigger: GGATTTTGCCCGAGGAGTCCATGGGACTGCCTGTAA...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGGGATGCGGTAGGAGTTaGAGATGGTCTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQGCGRS*RWSASG
Trigger: ACCAGATGCAGACCATCTCCAACTCCTACCGCATCC...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTTCTGTTTCAGCTCATTaGTGTATGCCCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGSVSAH*CMPRLA
Trigger: AGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGGTACTACCAGCTTTaGGCACCAGGTCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSWYYQL*APGLFQ
Trigger: CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGGGTTGCTTAGCCACTTaGTACTACCAGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAEGCLAT*YYQLWA
Trigger: TGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAAGCTCCTTCCCAGCCTaGGAAACACTCGACGTTGCT +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLESSFPA*ETLDVA
Trigger: AGCAACGTCGAGTGTTTCTCAGGCTGGGAAGGAGCT...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679887.1
CDS-3UTR TCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGAAGGTTACTGTCAGTaGGGTTACAGGCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSEGYCQ*GYRQSH
Trigger: ATGGGACTGCCTGTAACCTCACTGACAGTAACCTTC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCTGGAGGCAAACCTCTTaGTGTCTTCTGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLWRQTS*CLLEAS
Trigger: GGATGCTTCCAGAAGACATCAAGAGGTTTGCCTCCA...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGCCTTCCATTGGCAATaGCAATGGAGGCAAACCTCT +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSAFHWQ*QWRQTS
Trigger: AGAGGTTTGCCTCCATTGTCATTGCCAATGGAAGGC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTTCTTTACCTCATACCTaGCTCTCTTTCCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGSLPHT*LSFLTP
Trigger: GGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGA...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGAGAGGGCAAGCCCTCTaGAACACTGCTATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMRGQAL*NTAMSP
Trigger: TGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCT...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCTGCAATGTCACTGCATaGTTCTGGCTGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCCNVTA*FWLVLR
Trigger: TCTGAGAACCAGCCAGAAGCATGCAGTGACATTGCA...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTCTTTCTGGCACGTGTTaGTCCAGAATGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCLSGTC*SRMVRM
Trigger: CATCCTGACCATTCTGGAGCAACACGTGCCAGAAAG...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGCATCCAAAGGAAATGTaGCTCTGGGTACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWHPKEM*LWVQES
Trigger: GCTTTCTTGTACCCAGAGGCACATTTCCTTTGGATG...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGCTTCCAGAGGCCAATTaGGATTATCCAAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWLPEAN*DYPSFP
Trigger: AGGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAG...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTTTCTGGAAGCATCCGTaGCACCATGACAAACCTCTC +
Preference number: 4 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCFWKHP*HHDKPL
Trigger: GAGAGGTTTGTCATGGTGGCACGGATGCTTCCAGAA...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTTTCTGGAAGCATCCGTaGCACCATGACAAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGFWKHP*HHDKPL
Trigger: GAGAGGTTTGTCATGGTGGCACGGATGCTTCCAGAA...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCGAGGCTGCCGTGAAATaGGCTGATGGCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPEAAVK*ADGFEE
Trigger: CTCTTCAAAGCCATCAGCGCATTTCACGGCAGCCTC...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGAGGGCCAGGATTACTTaGTTGGCTGTCTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMRARIT*LAVWGM
Trigger: CATCCCCCAGACAGCCAAGCAAGTAATCCTGGCCCT...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434344.2
CDS-3UTR GCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTCCCATAGGGCAGAGTTaGACAAGTTGTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGPIGQS*TSCGCE
Trigger: TTCACACCCACAACTTGTGCAACTCTGCCCTATGGG...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCATCAATGCCCTGGGGTTaGTTAGCCACTTGGTACTAC +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSSMPWG*LATWYY
Trigger: GTAGTACCAAGTGGCTAAGCAACCCCAGGGCATTGA...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTTCTTTCCTGACCCCCTaGGGGGTAAGTCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: CLATWYYQLWAPGLFQLISFLTP*GVSQCP
Trigger: AGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGA...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGTCTTTCCTGACCCCCTaGGGGGTAAGTCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMSFLTP*GVSQCP
Trigger: AGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGA...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGCTGCATGCTTCTGGCTaGTTCTCAGAAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWLHASG*FSETEF
Trigger: GAATTCAGTTTCTGAGAACCAGCCAGAAGCATGCAG...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAACGTGTTGCTCCAGAATaGTCAGGATGTCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLERVAPE*SGCPLC
Trigger: GCAGAGGGGACATCCTGACCATTCTGGAGCAACACG...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTCTGCCTTCTTGGGGCTaGCTGGTATGTCATATAACT +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSLPSWG*LVCHIT
Trigger: AGTTATATGACATACCAGCCAGCCCCAAGAAGGCAG...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGAGTCCTGCCTTCTTaGGGCTGGCTGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRGVLPS*GWLVCH
Trigger: ATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCC...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATACTTGCTTGGCTGTCTaGGGGATGGAGTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHTCLAV*GMESCL
Trigger: AAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGT...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGAACCATGAGGAATTATaGCCCGCGGAATTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAENHEEL*PAEFSD
Trigger: GTCAGAGAATTCCGCGGGCCATAATTCCTCATGGTT...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCCTCTGCTGTCAGAACTaGAACCTGATAATCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCLCCQN*NLIICP
Trigger: CGGACAGATTATCAGGTTCCAGTTCTGACAGCAGAG...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGGATTGCATCAATGTTaGCCTCCAGATAGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCGLHQC*PPDSLG
Trigger: TCCGAGACTATCTGGAGGCCAACATTGATGCAATCC...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGGATTGCATCAATGTTaGCCTCCAGATAGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEGLHQC*PPDSLG
Trigger: TCCGAGACTATCTGGAGGCCAACATTGATGCAATCC...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTCATCTGGGCTGTTCTaGACACTGTCAGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAESSGLF*TLSVTR
Trigger: TCTTGTGACTGACAGTGTCCAGAACAGCCCAGATGA...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGGGGAATCAGAAAGCTTaGAGGAACCTTGTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQGNQKA*RNLVAD
Trigger: GTCAGCTACAAGGTTCCTTCAAGCTTTCTGATTCCC...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGAATCAGAAAGCTTaGAGGAACCTTGTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCGNQKA*RNLVAD
Trigger: GTCAGCTACAAGGTTCCTTCAAGCTTTCTGATTCCC...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCTCCCGAATTCTGTTCTaGAGGTTACTGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLSRILF*RLLSVR
Trigger: CCTCACTGACAGTAACCTTCAGAACAGAATTCGGGA...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGGCATCCGTGCCACCATaGCAAACCTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMASVPP*QTSQGH
Trigger: ATGACCTTGAGAGGTTTGTCATGGTGGCACGGATGC...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAGCATCCGTGCCACCATaGCAAACCTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLEASVPP*QTSQGH
Trigger: ATGACCTTGAGAGGTTTGTCATGGTGGCACGGATGC...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679887.1
CDS-3UTR GCA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTATGTCATATAACTGCTaGTTCTCTGGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCMSYNC*FSGSFR
Trigger: CCTGAAGGAGCCAGAGAAGCAGCAGTTATATGACAT...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCGAGTTGGAGATGGTCTaGATCTGGTCCCGAATTCTG +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPELEMV*IWSRIL
Trigger: CAGAATTCGGGACCAGATGCAGACCATCTCCAACTC...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCTTGTTTCAAGCAGGATaGGGTAGGAGTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLLFQAG*GRSWRW
Trigger: CCATCTCCAACTCCTACCGCATCCTGCTTGAAACAA...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCTTGTTTCAAGCAGGATaGGGTAGGAGTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPLFQAG*GRSWRW
Trigger: CCATCTCCAACTCCTACCGCATCCTGCTTGAAACAA...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGCTTCCAGAGGCCAATTaGGATTATCCAAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKLPEAN*DYPSFP
Trigger: AGGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAG...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCATAGGGCAGAGTTaGACAAGTTGTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMPIGQS*TSCGCE
Trigger: TTCACACCCACAACTTGTGCAACTCTGCCCTATGGG...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTCTGCCTTCTTGGGGCTaGCTGGTATGTCATATAACT +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGLPSWG*LVCHIT
Trigger: AGTTATATGACATACCAGCCAGCCCCAAGAAGGCAG...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGCTGCCTTCTTGGGGCTaGCTGGTATGTCATATAACT +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLLPSWG*LVCHIT
Trigger: AGTTATATGACATACCAGCCAGCCCCAAGAAGGCAG...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATATTGTTATTCAGTTGTaGAGTGAGGGACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHIVIQL*SEGPGS
Trigger: AGATCCAGGTCCCTCACTCCACAACTGAATAACAAT...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGGGATGCGGTAGGAGTTaGAGATGGTCTGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMGCGRS*RWSASG
Trigger: ACCAGATGCAGACCATCTCCAACTCCTACCGCATCC...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTTCATCTGGGCTGTTCTaGACACTGTCAGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGSSGLF*TLSVTR
Trigger: TCTTGTGACTGACAGTGTCCAGAACAGCCCAGATGA...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGGGTTGCTTAGCCACTTaGTACTACCAGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMGCLAT*YYQLWA
Trigger: TGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTAAGTCAATGCCCTaGGGTTGCTTAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: CLATWYYQLWAPGLFQLIGKSMP*GCLATW
Trigger: CCAAGTGGCTAAGCAACCCCAGGGCATTGACTTACC...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGACAGATTCTTCTATGTaGTCAGTGGACCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQTDSSM*SVDLWI
Trigger: AATCCACAGGTCCACTGATCACATAGAAGAATCTGT...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGCCTTCCATTGGCAATaGCAATGGAGGCAAACCTCT +
Preference number: 4 (lower is better)
Translates to: CLATWYYQLWAPGLFQLIAFHWQ*QWRQTS
Trigger: AGAGGTTTGCCTCCATTGTCATTGCCAATGGAAGGC...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGTGCAATGTCACTaGATGCTTCTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GCLATWYYQLWAPGLFQLIVQCH*MLLAGS
Trigger: AGAACCAGCCAGAAGCATGCAGTGACATTGCACAAT...GAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGATGTCATATAACTGCTaGTTCTCTGGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQMSYNC*FSGSFR
Trigger: CCTGAAGGAGCCAGAGAAGCAGCAGTTATATGACAT...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGTATGTCATATAACTaGTGCTTCTCTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPGMSYN*CFSGSF
Trigger: GAAGGAGCCAGAGAAGCAGCAGTTATATGACATACC...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGGTATGTCATATAACTaGTGCTTCTCTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSGMSYN*CFSGSF
Trigger: GAAGGAGCCAGAGAAGCAGCAGTTATATGACATACC...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGAGGATTTGGTAATGTaGTGTAACCGCCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEEDLVM*CNRLFL
Trigger: TAAGAAGAGGCGGTTACAGCACATTACCAAATCCTC...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTGCATGCTTCTGGCTaGTTCTCAGAAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQLHASG*FSETEF
Trigger: GAATTCAGTTTCTGAGAACCAGCCAGAAGCATGCAG...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATGAGGATTGTAGAAAGTaGAGCTGGAACTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHEDCRK*SWNWGE
Trigger: CTCTCCCCAGTTCCAGCTCCACTTTCTACAATCCTC...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCTGGATCTGCCACTTaGAGGATTGTAGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPPGSAT*RIVESG
Trigger: TCCACTTTCTACAATCCTCCAAGTGGCAGATCCAGG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTCATAAATATTGGGCTTaGTGTTCTGCTGTTCCACTC +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSHKYWA*CSAVPL
Trigger: GAGTGGAACAGCAGAACACCAAGCCCAATATTTATG...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGGGAAGTTGTCCGTCTaGAGAACCATGAGGAATTAT +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSGKLSV*RTMRNY
Trigger: ATAATTCCTCATGGTTCTCCAGACGGACAACTTCCC...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGCTTCTATGTGATCAGTaGACCTGTGGATTGCATCAA +
Preference number: 4 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWLLCDQ*TCGLHQ
Trigger: TTGATGCAATCCACAGGTCCACTGATCACATAGAAG...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGCTTCTATGTGATCAGTaGACCTGTGGATTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQLLCDQ*TCGLHQ
Trigger: TTGATGCAATCCACAGGTCCACTGATCACATAGAAG...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATCCTCTTGATGTCTTCTaGAAGCATCCGTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHPLDVF*KHPCHH
Trigger: ATGGTGGCACGGATGCTTCCAGAAGACATCAAGAGG...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGTGGTACTACCAGCTTTaGGCACCAGGTCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMWYYQL*APGLFQ
Trigger: CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATGGTTGCTTAGCCACTTaGTACTACCAGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHGCLAT*YYQLWA
Trigger: TGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACC...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGATCCATTCCGATTTCTaGGGATTTGGTAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQIHSDF*GFGNVL
Trigger: CAGCACATTACCAAATCCTCAGAAATCGGAATGGAT...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAATCCCGAATTCTGTTCTaGAGGTTACTGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLESRILF*RLLSVR
Trigger: CCTCACTGACAGTAACCTTCAGAACAGAATTCGGGA...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679887.1
CDS-3UTR TCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTCTGGTTCTCAGAAACTaGATTCTATGGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSLVLRN*ILWSYL
Trigger: CAGATAGCTCCATAGAATTCAGTTTCTGAGAACCAG...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp TGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTGGTTCTCAGAAACTaGATTCTATGGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: WGCLATWYYQLWAPGLFQLVLRN*ILWSYL
Trigger: CAGATAGCTCCATAGAATTCAGTTTCTGAGAACCAG...CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTTGCAATGTCACTGCATaGTTCTGGCTGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CLATWYYQLWAPGLFQLICNVTA*FWLVLR
Trigger: TCTGAGAACCAGCCAGAAGCATGCAGTGACATTGCA...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCTGTTCATCTTCCCTTTaGTTAGTGGAAGGGGTACTC +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPCSSSL*LVEGVL
Trigger: GAGTACCCCTTCCACTAAGCAAAGGGAAGATGAACA...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAATCTTCACCGCTTTACTaGCTGACTCCCCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLESSPLY*LTPLLD
Trigger: ATCTAGTAGGGGAGTCAGGCAGTAAAGCGGTGAAGA...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGCATAAATATTGGGCTTaGTGTTCTGCTGTTCCACTC +
Preference number: 4 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLHKYWA*CSAVPL
Trigger: GAGTGGAACAGCAGAACACCAAGCCCAATATTTATG...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTCTTAAATTCTGCATTTaGGGTCAACTGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSLKFCI*GQLHSL
Trigger: GAGACTGTGCAGTTGACCCCAAATGCAGAATTTAAG...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTCTTAAATTCTGCATTTaGGGTCAACTGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGLKFCI*GQLHSL
Trigger: GAGACTGTGCAGTTGACCCCAAATGCAGAATTTAAG...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTCTCTTTGGGGAGGCTaGATGTATTTTTCACACTTA +
Preference number: 4 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSSLWGG*MYFSHL
Trigger: TAAGTGTGAAAAATACATCCAGCCTCCCCAAAGAGA...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGAAGGGGTACTCTTTTaGTGTGATTCAGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEEGVLF*CDSVSL
Trigger: AAGAGAAACTGAATCACACCAAAAGAGTACCCCTTC...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTACTTACGTTTTTCCTaGCACCTGCTATACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEYLRFS*HLLYCV
Trigger: TACACAGTATAGCAGGTGCCAGGAAAAACGTAAGTA...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGATCCATTCCGATTTCTaGGGATTTGGTAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMIHSDF*GFGNVL
Trigger: CAGCACATTACCAAATCCTCAGAAATCGGAATGGAT...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGTTCTATGGAGCTATCTaGCAACACATGGGAAACGAT +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMFYGAI*QHMGND
Trigger: ATCGTTTCCCATGTGTTGTCAGATAGCTCCATAGAA...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATCATCCAAAGGAAATGTaGCTCTGGGTACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHHPKEM*LWVQES
Trigger: GCTTTCTTGTACCCAGAGGCACATTTCCTTTGGATG...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGAGAAACACTCGACGTTaGTTTAGGGATGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAERNTRR*FRDVIN
Trigger: ATTTATGACATCCCTAAAGCAACGTCGAGTGTTTCT...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGTGTTCATCTTCCCTTTaGTTAGTGGAAGGGGTACTC +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRCSSSL*LVEGVL
Trigger: GAGTACCCCTTCCACTAAGCAAAGGGAAGATGAACA...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCAGCAATTGTGGTTTTTaGCATTACTGTCTACGGCAA +
Preference number: 4 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPSNCGF*HYCLRQ
Trigger: TTGCCGTAGACAGTAATGGCAAAAACCACAATTGCT...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTACCTCCGTGAGGATTTaGAGGCGGTTGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFTSVRI*RRLAGA
Trigger: GGCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGT...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCATTGTTATTCAGTTGTaGAGTGAGGGACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPIVIQL*SEGPGS
Trigger: AGATCCAGGTCCCTCACTCCACAACTGAATAACAAT...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGGGGAAGTTGTCCGTCTaGAGAACCATGAGGAATTAT +
Preference number: 4 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMGKLSV*RTMRNY
Trigger: ATAATTCCTCATGGTTCTCCAGACGGACAACTTCCC...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGATTCAGTTTCTCTTTaGGGAGGCTGGATGTATTTT +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSDSVSL*GGWMYF
Trigger: AAAATACATCCAGCCTCCCCAAAGAGAAACTGAATC...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGATTCAGTTTCTCTTTaGGGAGGCTGGATGTATTTT +
Preference number: 4 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSDSVSL*GGWMYF
Trigger: AAAATACATCCAGCCTCCCCAAAGAGAAACTGAATC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR TCA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAACAGATTCTTCTATGTaGTCAGTGGACCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: KFQEGKPSETLLCLQHLETDSSM*SVDLWI
Trigger: AATCCACAGGTCCACTGATCACATAGAAGAATCTGT...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679887.1
CDS-3UTR GCA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAAGAAACACTCGACGTTaGTTTAGGGATGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSRNTRR*FRDVIN
Trigger: ATTTATGACATCCCTAAAGCAACGTCGAGTGTTTCT...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGAAGGAAATGTGCCTCTaGGTACAAGAAAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRKEMCL*VQESHK
Trigger: CTTATGGCTTTCTTGTACCCAGAGGCACATTTCCTT...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATAAGGAAATGTGCCTCTaGGTACAAGAAAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHKEMCL*VQESHK
Trigger: CTTATGGCTTTCTTGTACCCAGAGGCACATTTCCTT...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGGAAGGGGTACTCTTTTaGTGTGATTCAGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMEGVLF*CDSVSL
Trigger: AAGAGAAACTGAATCACACCAAAAGAGTACCCCTTC...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTCTATCTGACAACACATaGGAAACGATCAAAAAGACT +
Preference number: 4 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGLSDNT*ETIKKT
Trigger: AGTCTTTTTGATCGTTTCCCATGTGTTGTCAGATAG...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTTTCCCTTCATGTCGGTaGTGTGGAGCAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFFPSCR*CGAAPL
Trigger: CAGGGGAGCTGCTCCACATCACCGACATGAAGGGAA...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTAGTGTCCCTCTGAACTaGCGCGTGTGTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFSVPLN*RVCCSS
Trigger: GCTGGAGCAACACACGCGGCAGTTCAGAGGGACACT...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTGGCACGTCATACACCTaGGAAGGCAGAGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFGTSYT*EGRVGS
Trigger: ACTGCCGACTCTGCCTTCCCAGGTGTATGACGTGCC...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGTCTCTTTGGGGAGGCTaGATGTATTTTTCACACTTA +
Preference number: 4 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRSLWGG*MYFSHL
Trigger: TAAGTGTGAAAAATACATCCAGCCTCCCCAAAGAGA...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCTATCTGACAACACATaGGAAACGATCAAAAAGACT +
Preference number: 4 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMLSDNT*ETIKKT
Trigger: AGTCTTTTTGATCGTTTCCCATGTGTTGTCAGATAG...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTATCTCCACTTCCTGCTaGCAAAGAGCATCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFISTSC*QRASGQ
Trigger: CTGGCCTGATGCTCTTTGTCAGCAGGAAGTGGAGAT...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCAACCCTCGCTTTCTaGCACGTGTTGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFPTLAF*HVLLQN
Trigger: ATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGG...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTGGTAGGAGTTGGAGATaGTCTGCATCTGGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFGRSWR*SASGPE
Trigger: TTCGGGACCAGATGCAGACCATCTCCAACTCCTACC...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTGAGTTGGAGATGGTCTaGATCTGGTCCCGAATTCTG +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFELEMV*IWSRIL
Trigger: CAGAATTCGGGACCAGATGCAGACCATCTCCAACTC...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTTCAATGCCCTGGGGTTaGTTAGCCACTTGGTACTAC +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFSMPWG*LATWYY
Trigger: GTAGTACCAAGTGGCTAAGCAACCCCAGGGCATTGA...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTTGGTACTACCAGCTTTaGGCACCAGGTCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFWYYQL*APGLFQ
Trigger: CTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTTCTTCACCGCTTTACTaGCTGACTCCCCTACTAGAT +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFSSPLY*LTPLLD
Trigger: ATCTAGTAGGGGAGTCAGGCAGTAAAGCGGTGAAGA...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGGATCTGCCACTTaGAGGATTGTAGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFPGSAT*RIVESG
Trigger: TCCACTTTCTACAATCCTCCAAGTGGCAGATCCAGG...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTATTGTGCAATGTCACTaGATGCTTCTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFIVQCH*MLLAGS
Trigger: AGAACCAGCCAGAAGCATGCAGTGACATTGCACAAT...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR TCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTTTCTATGGAGCTATCTaGCAACACATGGGAAACGAT +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFFYGAI*QHMGND
Trigger: ATCGTTTCCCATGTGTTGTCAGATAGCTCCATAGAA...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR GCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTGAGGATTTGGTAATGTaGTGTAACCGCCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFEDLVM*CNRLFL
Trigger: TAAGAAGAGGCGGTTACAGCACATTACCAAATCCTC...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR GCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTAGCAATTGTGGTTTTTaGCATTACTGTCTACGGCAA +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFSNCGF*HYCLRQ
Trigger: TTGCCGTAGACAGTAATGGCAAAAACCACAATTGCT...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CCA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTTACTTACGTTTTTCCTaGCACCTGCTATACTGTGTA +
Preference number: 4 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFYLRFS*HLLYCV
Trigger: TACACAGTATAGCAGGTGCCAGGAAAAACGTAAGTA...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS CCA 90 bp CCTCTGAACTGCCGCGTGTGTTGCTCCAGCTTCTCAGCCTCCGCCTaGAGGTGCCCCAGCGCGGCAGGGCTGGGGTACGTGAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: PLNCRVCCSSFSASA*RCPSAAGLGYVSTA
Trigger: TGCCGTGCTCACGTACCCCAGCCCTGCCGCGCTGGGGCACCTCCAGGCGGAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 90 bp GTAGACAGTCCTCATCCCAGTGTCCCTCTGAACTGCCGCGTGTGTTaGTCCAGCTTCTCAGCCTCCGCCTGGAGGTGCCCCAGCGCGGCA +
Preference number: 5 (lower is better)
Translates to: VDSPHPSVPLNCRVC*SSFSASAWRCPSAA
Trigger: TGCCGCGCTGGGGCACCTCCAGGCGGAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTCAGAGGGACACTGGGATGAGGACTGTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 90 bp GGAGGAAGGGAGGTAGACAGTCCTCATCCCAGTGTCCCTCTGAACTaGCGCGTGTGTTGCTCCAGCTTCTCAGCCTCCGCCTGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GGREVDSPHPSVPLN*RVCCSSFSASAWRC
Trigger: GCACCTCCAGGCGGAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTCAGAGGGACACTGGGATGAGGACTGTCTACCTCCCTTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 90 bp AGTGATGATCTCCGCGGGCTGGCTGCTGCTGAGGCTGCCGTGAAATaGGCTGATGGCTTTGAAGAGCGCCCCAAAGTAGAGCCGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SDDLRGLAAAEAAVK*ADGFEERPKVEPAV
Trigger: CACTGCCGGCTCTACTTTGGGGCGCTCTTCAAAGCCATCAGCGCATTTCACGGCAGCCTCAGCAGCAGCCAGCCCGCGGAGATCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp GTGAGGATTTGGAGGCGGTTGGCAGGGGCCAGGCCTTGCCTCCCATaGAGCAAACACTTCCACCAACCCTCGCTTTCTGGCACGTGTTGC +
Preference number: 5 (lower is better)
Translates to: VRIWRRLAGARPCLP*SKHFHQPSLSGTCC
Trigger: GCAACACGTGCCAGAAAGCGAGGGTTGGTGGAAGTGTTTGCTCCATGGGAGGCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp TCATCTGCTCATAAACGGGGCCTGGAGTGGGAGGGCGGGGTAGAGTaGGCACCTGATAGGTCTCCTCTGAGCTGGCAGGAGCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSAHKRGLEWEGGVE*APDRSPLSWQELLP
Trigger: TGGAAGAAGCTCCTGCCAGCTCAGAGGAGACCTATCAGGTGCCCACTCTACCCCGCCCTCCCACTCCAGGCCCCGTTTATGAGCAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679887.1
CDS CCA 90 bp CCAGGTCCAAGGAGAGCTCCTTTGCTGACTCCTCCGAGGAAGAGCTaGAGGAGTCGTCGGTGGATGTGGTGGAGCACGAGGAAACGATGC +
Preference number: 5 (lower is better)
Translates to: PGPRRAPLLTPPRKS*RSRRWMWWSTRKRC
Trigger: GCATCGTTTCCTCGTGCTCCACCACATCCACCGACGACTCCTCCAGCTCTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCCTTGGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATCTGGCCAGGAGTGCCTaGGGCGCACAGTCCATGATG +
Preference number: 5 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHLARSA*GAQSMM
Trigger: CATCATGGACTGTGCGCCCAAGGCACTCCTGGCCAG...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGGGCAGGGGCCAGGCCTaGCCTCCCATGGAGCAAACA +
Preference number: 5 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQGRGQA*PPMEQT
Trigger: TGTTTGCTCCATGGGAGGCAAGGCCTGGCCCCTGCC...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGACCTCCGTGAGGATTaGGAGGCGGTTGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWDLRED*EAVGRG
Trigger: GCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGTC...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCGAACACCCTGCCCACTaGCTTGGCTGTCTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGEHPAH*LGCLGD
Trigger: ATCCCCCAGACAGCCAAGCAAGTGGGCAGGGTGTTC...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp ACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCGCTGAGGCGGGAGAATaGCTTCAACCCAGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: TSFGHQVCFSSLVYAPAGAEAGE*LQPRRR
Trigger: CCGCCTTCTGGGTTGAAGCAATTCTCCCGCCTCAGC...GCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS TCA 90 bp CACTGTCTCCTTGGCCACATCCAGGTCCAAGGAGAGCTCCTTTGCTaGCTCCTCCGAGGAAGAGCTGGAGGAGTCGTCGGTGGATGTGGT +
Preference number: 5 (lower is better)
Translates to: HCLLGHIQVQGELLC*LLRGRAGGVVGGCG
Trigger: ACCACATCCACCGACGACTCCTCCAGCTCTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCCTTGGACCTGGATGTGGCCAAGGAGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTGGCAGGGGCCAGGCCTaGCCTCCCATGGAGCAAACA +
Preference number: 5 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGGRGQA*PPMEQT
Trigger: TGTTTGCTCCATGGGAGGCAAGGCCTGGCCCCTGCC...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGGACCTCCGTGAGGATTaGGAGGCGGTTGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLDLRED*EAVGRG
Trigger: GCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGTC...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATGGGGAATTCATAGACTaGGGCAGTAGGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHGEFID*GSRGLG
Trigger: CCCCAGCCCCCTACTGCCCAAGTCTATGAATTCCCC...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CAA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGGGGGAATTCATAGACTaGGGCAGTAGGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWGEFID*GSRGLG
Trigger: CCCCAGCCCCCTACTGCCCAAGTCTATGAATTCCCC...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CAA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGGGAGAGCGTGGGGCCTaGATTCTTCCGCAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWGERGA*ILPQSW
Trigger: CCAGCTTTGCGGAAGAATCAAGGCCCCACGCTCTCC...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTCCACGGAGGATCTCGTaGCGCACGTCCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGPRRIS*RTSLSW
Trigger: CCAGGAGAGGGACGTGCGCAACGAGATCCTCCGTGG...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATGAACTGCCGCGTGTGTaGCTCCAGCTTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHELPRV*LQLLSL
Trigger: GAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTC...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 90 bp CTGCTGACAAAGAGCATCAGGCCAGCGACAGAGCTGACCACCTTGTaGTGCAGAGCCATCACTGTCTCCTTGGCCACATCCAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LLTKSIRPATELTTL*CRAITVSLATSRSK
Trigger: CTTGGACCTGGATGTGGCCAAGGAGACAGTGATGGCTCTGCAGCACAAGGTGGTCAGCTCTGTCGCTGGCCTGATGCTCTTTGTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCTGGCCAGGAGTGCCTaGGGCGCACAGTCCATGATG +
Preference number: 5 (lower is better)
Translates to: WYYQLWAPGLFQLIGVCPLARSA*GAQSMM
Trigger: CATCATGGACTGTGCGCCCAAGGCACTCCTGGCCAG...GGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGAGGATTTGGAGGCGGTaGGCAGGGGCCAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMRIWRR*AGARPC
Trigger: GCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCCT...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCGACCTCCGTGAGGATTaGGAGGCGGTTGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPDLRED*EAVGRG
Trigger: GCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGTC...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATTGGAGTCCTGCCTTCTaGGGGCTGGCTGGTATGTCA +
Preference number: 5 (lower is better)
Translates to: GHQVCFSSLVYAPAGFSHWSPAF*GLAGMS
Trigger: TGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCA...ATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGGAACACCCTGCCCACTaGCTTGGCTGTCTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAEEHPAH*LGCLGD
Trigger: ATCCCCCAGACAGCCAAGCAAGTGGGCAGGGTGTTC...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAACTGCCGCGTGTGTaGCTCCAGCTTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCELPRV*LQLLSL
Trigger: GAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTC...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS TCA 90 bp AGGATTGTAGAAAGTGGAGCTGGAACTGGGGAGAGCGTGGGGCCTTaGTTCTTCCGCAAAGCTGGTGAGAGGCGTGTTTCTGACGCTGGC +
Preference number: 5 (lower is better)
Translates to: RIVESGAGTGESVGP*FFRKAGERRVSDAG
Trigger: GCCAGCGTCAGAAACACGCCTCTCACCAGCTTTGCGGAAGAATCAAGGCCCCACGCTCTCCCCAGTTCCAGCTCCACTTTCTACAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS GCA 90 bp CCATGGAGCAAACACTTCCACCAACCCTCGCTTTCTGGCACGTGTTaGTCCAGAATGGTCAGGATGTCCCCTCTGCTGAAAGCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PWSKHFHQPSLSGTC*SRMVRMSPLLKASS
Trigger: CGAGCTGGCTTTCAGCAGAGGGGACATCCTGACCATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGGTGGAAGTGTTTGCTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp GCCTTGCCTCCCATGGAGCAAACACTTCCACCAACCCTCGCTTTCTaGCACGTGTTGCTCCAGAATGGTCAGGATGTCCCCTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: ALPPMEQTLPPTLAF*HVLLQNGQDVPSAE
Trigger: TTCAGCAGAGGGGACATCCTGACCATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGGTGGAAGTGTTTGCTCCATGGGAGGCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAAAGGATTTGGAGGCGGTaGGCAGGGGCCAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: KFQEGKPSETLLCLQHLERIWRR*AGARPC
Trigger: GCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCCT...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CAA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTAGGATTTGGAGGCGGTaGGCAGGGGCCAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: CLATWYYQLWAPGLFQLIRIWRR*AGARPC
Trigger: GCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCCT...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGGAGTCCTGCCTTCTaGGGGCTGGCTGGTATGTCA +
Preference number: 5 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSWSPAF*GLAGMS
Trigger: TGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCA...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTTGGAGTCCTGCCTTCTaGGGGCTGGCTGGTATGTCA +
Preference number: 5 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCWSPAF*GLAGMS
Trigger: TGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCA...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGCCAAGGAGAGCTCCTTaGCTGACTCCTCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAEPRRAP*LTPPRK
Trigger: CTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCCTTGG...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCACGGAGGATCTCGTaGCGCACGTCCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMPRRIS*RTSLSW
Trigger: CCAGGAGAGGGACGTGCGCAACGAGATCCTCCGTGG...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGAACTGCCGCGTGTGTaGCTCCAGCTTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCELPRV*LQLLSL
Trigger: GAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTC...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGAGGGCCAGGATTACTaGCTTGGCTGTCTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCEEGQDY*LGCLGD
Trigger: ATCCCCCAGACAGCCAAGCAAGTAATCCTGGCCCTC...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434344.2
CDS-3UTR CAA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCGTCTGTTTCAGCTCATaGGTGTATGCCCCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCVCFSS*VYAPAG
Trigger: GCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp CACTTGCTTGGCTGTCTGGGGGATGGAGTCCTGCCTTCTTGGGGCTaGCTGGTATGTCATATAACTGCTGCTTCTCTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: HLLGCLGDGVLPSWG*LVCHITAASLAPSG
Trigger: TCCTGAAGGAGCCAGAGAAGCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAACTGGCCAGGAGTGCCTaGGGCGCACAGTCCATGATG +
Preference number: 5 (lower is better)
Translates to: KFQEGKPSETLLCLQHLELARSA*GAQSMM
Trigger: CATCATGGACTGTGCGCCCAAGGCACTCCTGGCCAG...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CAA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGACAGAGCTGACCACCTaGTGCTGCAGAGCCATCACT +
Preference number: 5 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKTELTT*CCRAIT
Trigger: AGTGATGGCTCTGCAGCACAAGGTGGTCAGCTCTGT...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp ATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAACAGAGCTGACCACCTaGTGCTGCAGAGCCATCACT +
Preference number: 5 (lower is better)
Translates to: MPRLAFPIGQSCTSCGCETELTT*CCRAIT
Trigger: AGTGATGGCTCTGCAGCACAAGGTGGTCAGCTCTGT...TTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTGTCTGTTTCAGCTCATaGGTGTATGCCCCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGVCFSS*VYAPAG
Trigger: GCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGGGGTTGCTTAGCCACTaGGTACTACCAGCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKGLLSH*VLPALG
Trigger: GCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCC...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp TACTTGCTTGGCTGTCTGGGGGATGGAGTCCTGCCTTCTTGGGGCTaGCTGGTATGTCATATAACTGCTGCTTCTCTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: YLLGCLGDGVLPSWG*LVCHITAASLAPSG
Trigger: TCCTGAAGGAGCCAGAGAAGCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434344.2
CDS CCA 90 bp CAGGATTACTTGCTTGGCTGTCTGGGGGATGGAGTCCTGCCTTCTTaGGGCTGGCTGGTATGTCATATAACTGCTGCTTCTCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QDYLLGCLGDGVLPS*GWLVCHITAASLAP
Trigger: AGGAGCCAGAGAAGCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGTAATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434344.2
CDS-3UTR CAA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGAGAGCGTGGGGCCTaGATTCTTCCGCAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRGERGA*ILPQSW
Trigger: CCAGCTTTGCGGAAGAATCAAGGCCCCACGCTCTCC...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCAAGGAGAGCTCCTTaGCTGACTCCTCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPPRRAP*LTPPRK
Trigger: CTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCCTTGG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGCAGTGGACCTGTGGATaGCATCAATGTTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEQWTCG*HQCWPP
Trigger: TGGAGGCCAACATTGATGCAATCCACAGGTCCACTG...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTCCTCTCAGGAGTCTGTaGACTCGAAGGCTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: AHWCMPRLAFPIGQSCTSPLRSL*TRRLRY
Trigger: ATACCTCAGCCTTCGAGTCAACAGACTCCTGAGAGG...ACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp ACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCCTGGTTGGTACTACCAGCTTaGGGCACCAGGTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: TSYLTLFPDPLRGKSMPWLVLPA*GTRSVS
Trigger: TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA...CCAGGGCATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp CACATTGTTATTCAGTTGTGGAGTGAGGGACCTGGATCTGCCACTTaGAGGATTGTAGAAAGTGGAGCTGGAACTGGGGAGAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: HIVIQLWSEGPGSAT*RIVESGAGTGESVG
Trigger: CCCCACGCTCTCCCCAGTTCCAGCTCCACTTTCTACAATCCTCCAAGTGGCAGATCCAGGTCCCTCACTCCACAACTGAATAACAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp AGAACCATGAGGAATTATGGCCCGCGGAATTCTCTGACACCTCCTTaGCTTTCTCCAGCTCCTTCCCAGCCTGAGAAACACTCGACGTTG +
Preference number: 5 (lower is better)
Translates to: RTMRNYGPRNSLTPP*LSPAPSQPEKHSTL
Trigger: CAACGTCGAGTGTTTCTCAGGCTGGGAAGGAGCTGGAGAAAGCCAAGGAGGTGTCAGAGAATTCCGCGGGCCATAATTCCTCATGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGCTTTCTGGCACGTGTaGCTCCAGAATGGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSAFWHV*LQNGQD
Trigger: ATCCTGACCATTCTGGAGCAACACGTGCCAGAAAGC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CTGGGGTTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTTTCTGGCACGTGTaGCTCCAGAATGGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LGLLSHLVLPALGTRSVSAFWHV*LQNGQD
Trigger: ATCCTGACCATTCTGGAGCAACACGTGCCAGAAAGC...TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTGAAGCTGAGACCTGGATCTGCCACTaGGAGGATTGTAGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: RLAFPIGQSCTSCGCEAETWICH*EDCRKW
Trigger: CCACTTTCTACAATCCTCCAAGTGGCAGATCCAGGT...CTCAGCTTCACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCAGGAGATGGGGAAGTaGTCCGTCTGGAGAACCATG +
Preference number: 5 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMQEMGK*SVWRTM
Trigger: CATGGTTCTCCAGACGGACAACTTCCCCATCTCCTG...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGCAGTGGACCTGTGGATaGCATCAATGTTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLQWTCG*HQCWPP
Trigger: TGGAGGCCAACATTGATGCAATCCACAGGTCCACTG...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGGTCTGTTTCAGCTCATaGGTGTATGCCCCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMVCFSS*VYAPAG
Trigger: GCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGTTGGTACTACCAGCTTaGGGCACCAGGTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWLVLPA*GTRSVS
Trigger: TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCGGGTTGCTTAGCCACTaGGTACTACCAGCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPGLLSH*VLPALG
Trigger: GCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCC...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGGTGTCCGATTTCTGAGGATTaGGTAATGTGCTGTAACCGC +
Preference number: 5 (lower is better)
Translates to: CMPRLAFPIGQSCTSCGCPISED*VMCCNR
Trigger: GCGGTTACAGCACATTACCAAATCCTCAGAAATCGG...ACACCCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGCACATTGTTATTCAGTaGTGGAGTGAGGGACCTGGA +
Preference number: 5 (lower is better)
Translates to: SSLVYAPAGFSHRAELHKHIVIQ*WSEGPG
Trigger: TCCAGGTCCCTCACTCCACAACTGAATAACAATGTG...CTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGCAGGAGATGGGGAAGTaGTCCGTCTGGAGAACCATG +
Preference number: 5 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRQEMGK*SVWRTM
Trigger: CATGGTTCTCCAGACGGACAACTTCCCCATCTCCTG...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGGTGTTCATCTTCCCTTaGCTTAGTGGAAGGGGTACT +
Preference number: 5 (lower is better)
Translates to: VCFSSLVYAPAGFSHRAEVFIFP*LSGRGT
Trigger: AGTACCCCTTCCACTAAGCAAAGGGAAGATGAACAC...CTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCCCTCTCAGGAGTCTGTaGACTCGAAGGCTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPPLRSL*TRRLRY
Trigger: ATACCTCAGCCTTCGAGTCAACAGACTCCTGAGAGG...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTAAGTCAATGCCTCTCAGGAGTCTGTaGACTCGAAGGCTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: VFTSYLTLFPDPLRGKSMPLRSL*TRRLRY
Trigger: ATACCTCAGCCTTCGAGTCAACAGACTCCTGAGAGG...CATTGACTTACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGGTTGCTTAGCCACTaGGTACTACCAGCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: CLATWYYQLWAPGLFQLIGLLSH*VLPALG
Trigger: GCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAACCC...AATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp AACCTGATAATCTGTCCGGTTCAGGAGATGGGGAAGTTGTCCGTCTaGAGAACCATGAGGAATTATGGCCCGCGGAATTCTCTGACACCT +
Preference number: 5 (lower is better)
Translates to: NLIICPVQEMGKLSV*RTMRNYGPRNSLTP
Trigger: AGGTGTCAGAGAATTCCGCGGGCCATAATTCCTCATGGTTCTCCAGACGGACAACTTCCCCATCTCCTGAACCGGACAGATTATCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGGGTCCGATTTCTGAGGATTaGGTAATGTGCTGTAACCGC +
Preference number: 5 (lower is better)
Translates to: LHKVFTSYLTLFPDPLRGPISED*VMCCNR
Trigger: GCGGTTACAGCACATTACCAAATCCTCAGAAATCGG...ACCCCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AGGTCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGTATCCAAGCTTTCCTTaGTTTCAAGCAGGATGCGGT +
Preference number: 5 (lower is better)
Translates to: RSVSAHWCMPRLAFPIGQYPSFP*FQAGCG
Trigger: ACCGCATCCTGCTTGAAACAAAGGAAAGCTTGGATA...CTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGAAAAGGAGCCTTCCATaGGCAATGACAATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SLVYAPAGFSHRAELHKLKRSLP*AMTMEA
Trigger: TGCCTCCATTGTCATTGCCAATGGAAGGCTCCTTTT...CAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TCTGTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTGTGTTCATCTTCCCTTaGCTTAGTGGAAGGGGTACT +
Preference number: 5 (lower is better)
Translates to: SVSAHWCMPRLAFPIGQSVFIFP*LSGRGT
Trigger: AGTACCCCTTCCACTAAGCAAAGGGAAGATGAACAC...ACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCTTGGTACTACCAGCTTaGGGCACCAGGTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPLVLPA*GTRSVS
Trigger: TGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 90 bp AATGACAATGGAGGCAAACCTCTTGATGTCTTCTGGAAGCATCCGTaGCACCATGACAAACCTCTCAAGGTCATCTGGGCTGTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: NDNGGKPLDVFWKHP*HHDKPLKVIWAVLD
Trigger: GTCCAGAACAGCCCAGATGACCTTGAGAGGTTTGTCATGGTGGCACGGATGCTTCCAGAAGACATCAAGAGGTTTGCCTCCATTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp ATCCGTGCCACCATGACAAACCTCTCAAGGTCATCTGGGCTGTTCTaGACACTGTCAGTCACAAGAACTTCCAGAGGCCAATTGCGATTA +
Preference number: 5 (lower is better)
Translates to: IRATMTNLSRSSGLF*TLSVTRTSRGQLRL
Trigger: TAATCGCAATTGGCCTCTGGAAGTTCTTGTGACTGACAGTGTCCAGAACAGCCCAGATGACCTTGAGAGGTTTGTCATGGTGGCACGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp CCTTCCATTGGCAATGACAATGGAGGCAAACCTCTTGATGTCTTCTaGAAGCATCCGTGCCACCATGACAAACCTCTCAAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: PSIGNDNGGKPLDVF*KHPCHHDKPLKVIW
Trigger: CCAGATGACCTTGAGAGGTTTGTCATGGTGGCACGGATGCTTCCAGAAGACATCAAGAGGTTTGCCTCCATTGTCATTGCCAATGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGACCTGGATCTGCCACTaGGAGGATTGTAGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: HLVLPALGTRSVSAHWCMTWICH*EDCRKW
Trigger: CCACTTTCTACAATCCTCCAAGTGGCAGATCCAGGT...CATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp CATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTTATCCAAGCTTTCCTTaGTTTCAAGCAGGATGCGGT +
Preference number: 5 (lower is better)
Translates to: HWCMPRLAFPIGQSCTSCYPSFP*FQAGCG
Trigger: ACCGCATCCTGCTTGAAACAAAGGAAAGCTTGGATA...ACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCACTTCCAGAGGCCAATaGCGATTATCCAAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPTSRGQ*RLSKLS
Trigger: GGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAGT...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTGGTGTATGCCCAAAAGGAGCCTTCCATaGGCAATGACAATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LVLPALGTRSVSAHWCMPKRSLP*AMTMEA
Trigger: TGCCTCCATTGTCATTGCCAATGGAAGGCTCCTTTT...GGGCATACACCAATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp GTTTCAGCTCATTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCAAGCAATTGTGGTTTTaGCCATTACTGTCTACGGCA +
Preference number: 5 (lower is better)
Translates to: VSAHWCMPRLAFPIGQSCKQLWF*PLLSTA
Trigger: TGCCGTAGACAGTAATGGCAAAAACCACAATTGCTT...GCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAATGAGCTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGGTGTATGCCCCGGCTGGCTTTTCCCATAGGGCAGAGTTGCACAAGTTGTGGAAGCAATTGTGGTTTTaGCCATTACTGTCTACGGCA +
Preference number: 5 (lower is better)
Translates to: LVYAPAGFSHRAELHKLWKQLWF*PLLSTA
Trigger: TGCCGTAGACAGTAATGGCAAAAACCACAATTGCTT...CCACAACTTGTGCAACTCTGCCCTATGGGAAAAGCCAGCCGGGGCATACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS GCA 90 bp GAGGCCAATTGCGATTATCCAAGCTTTCCTTTGTTTCAAGCAGGATaGGGTAGGAGTTGGAGATGGTCTGCATCTGGTCCCGAATTCTGT +
Preference number: 5 (lower is better)
Translates to: EANCDYPSFPLFQAG*GRSWRWSASGPEFC
Trigger: ACAGAATTCGGGACCAGATGCAGACCATCTCCAACTCCTACCGCATCCTGCTTGAAACAAAGGAAAGCTTGGATAATCGCAATTGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS GCA 90 bp GGCTGTTCTGGACACTGTCAGTCACAAGAACTTCCAGAGGCCAATTaGGATTATCCAAGCTTTCCTTTGTTTCAAGCAGGATGCGGTAGG +
Preference number: 5 (lower is better)
Translates to: GCSGHCQSQELPEAN*DYPSFPLFQAGCGR
Trigger: CCTACCGCATCCTGCTTGAAACAAAGGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAGTTCTTGTGACTGACAGTGTCCAGAACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AAGTTCCAAGAGGGCAAGCCCTCTGAAACACTGCTATGTCTCCAGCACCTAGAACACATTGTTATTCAGTaGTGGAGTGAGGGACCTGGA +
Preference number: 5 (lower is better)
Translates to: KFQEGKPSETLLCLQHLEHIVIQ*WSEGPG
Trigger: TCCAGGTCCCTCACTCCACAACTGAATAACAATGTG...TTCTAGGTGCTGGAGACATAGCAGTGTTTCAGAGGGCTTGCCCTCTTGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679887.1
CDS TCA 90 bp ATTGGGCTTGGTGTTCTGCTGTTCCACTCGGGGAATCAGAAAGCTTaGAGGAACCTTGTAGCTGACATCTTCATCCAAAGGAAATGTGCC +
Preference number: 5 (lower is better)
Translates to: IGLGVLLFHSGNQKA*RNLVADIFIQRKCA
Trigger: GGCACATTTCCTTTGGATGAAGATGTCAGCTACAAGGTTCCTTCAAGCTTTCTGATTCCCCGAGTGGAACAGCAGAACACCAAGCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp AAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTCCTGACCCCCTGCGGTTCTGCATGGGCACATaGTTATTCAGTTGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: KLHKVFTSYLTLFPDPLRFCMGT*LFSCGV
Trigger: CACTCCACAACTGAATAACAATGTGCCCATGCAGAA...CCGCAGGGGGTCAGGAAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TTGCTTAGCCACTTGGTACTACCAGCTTTGGGCACCAGGTCTGTTTCAGCTCATTTCTGCATGGGCACATaGTTATTCAGTTGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LLSHLVLPALGTRSVSAHFCMGT*LFSCGV
Trigger: CACTCCACAACTGAATAACAATGTGCCCATGCAGAA...ATGAGCTGAAACAGACCTGGTGCCCAAAGCTGGTAGTACCAAGTGGCTAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS TCA 90 bp ATAAGCCACCAGGCCCAGCCTCAGAAAAGTATTTCTAAGAGTAGCTaGAGTCTGGGGGCTGATCAGACCATGGGCAATTTGAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: ISHQAQPQKSISKSS*SLGADQTMGNLKEC
Trigger: ACATTCTTTCAAATTGCCCATGGTCTGATCAGCCCCCAGACTTCAGCTACTCTTAGAAATACTTTTCTGAGGCTGGGCCTGGTGGCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497244.1
CDS-3UTR CAA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTGCTGAGGCGGGAGAATaGCTTCAACCCAGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFAEAGE*LQPRRR
Trigger: CCGCCTTCTGGGTTGAAGCAATTCTCCCGCCTCAGC...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS CCA 90 bp GGGCAAAATCCAGAAATTCTCTTACAGATTCTTCTATGTGATCAGTaGACCTGTGGATTGCATCAATGTTGGCCTCCAGATAGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: GQNPEILLQILLCDQ*TCGLHQCWPPDSLG
Trigger: TCCGAGACTATCTGGAGGCCAACATTGATGCAATCCACAGGTCCACTGATCACATAGAAGAATCTGTAAGAGAATTTCTGGATTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 90 bp GCTGGTTCTCAGAAACTGAATTCTATGGAGCTATCTGACAACACATaGGAAACGATCAAAAAGACTCTCCCAGCAGGCAAACTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: AGSQKLNSMELSDNT*ETIKKTLPAGKLSG
Trigger: TCCAGAAAGTTTGCCTGCTGGGAGAGTCTTTTTGATCGTTTCCCATGTGTTGTCAGATAGCTCCATAGAATTCAGTTTCTGAGAACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434344.2
ENST00000679887.1
CDS TCA 90 bp CTAAGAGTAGCTGAAGTCTGGGGGCTGATCAGACCATGGGCAATTTaGAAGAATGTTTCTACTTCCTCTTTCGTTGCTAAGAAACACACT +
Preference number: 5 (lower is better)
Translates to: LRVAEVWGLIRPWAI*KNVSTSSFVAKKHT
Trigger: AGTGTGTTTCTTAGCAACGAAAGAGGAAGTAGAAACATTCTTTCAAATTGCCCATGGTCTGATCAGCCCCCAGACTTCAGCTACTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497244.1
CDS TCA 90 bp AGATTGTGCAATGTCACTGCATGCTTCTGGCTGGTTCTCAGAAACTaGATTCTATGGAGCTATCTGACAACACATGGGAAACGATCAAAA +
Preference number: 5 (lower is better)
Translates to: RLCNVTACFWLVLRN*ILWSYLTTHGKRSK
Trigger: TTTTGATCGTTTCCCATGTGTTGTCAGATAGCTCCATAGAATTCAGTTTCTGAGAACCAGCCAGAAGCATGCAGTGACATTGCACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000497244.1
ENST00000679887.1
CDS-3UTR CAA 90 bp TACTCCATATATGCTAAACTTCACAAGGTCTTTACCTCATACCTGACTCTCTTTACTTCCAGAGGCCAATaGCGATTATCCAAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: YSIYAKLHKVFTSYLTLFTSRGQ*RLSKLS
Trigger: GGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAGT...AAAGAGAGTCAGGTATGAGGTAAAGACCTTGTGAAGTTTAGCATATATGGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp GGGCACGGCCTGTCTGCAGCGACCTCCGTGAGGATTTaGAGGCGGTTGGCAGGGGCCAGGCCTTGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: GHGLSAATSVRI*RRLAGARPCLP
Trigger: TGGGAGGCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGTCGCTGCAGACAGGCCGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp ACGGGGCCCCGGTGCTGGGTAGGCACGTCATACACCTaGGAAGGCAGAGTCGGCAGTGAGGCCCGGACAGGT +
Preference number: 6 (lower is better)
Translates to: TGPRCWVGTSYT*EGRVGSEARTG
Trigger: ACCTGTCCGGGCCTCACTGCCGACTCTGCCTTCCCAGGTGTATGACGTGCCTACCCAGCACCGGGGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp GGGCACGGCCTGTCTGCAGCGACCTCCGTGAGGATTTGGAGGCGGTaGGCAGGGGCCAGGCCTTGCCTCCCATGGAGCAAACACTTCCAC +
Preference number: 6 (lower is better)
Translates to: GHGLSAATSVRIWRR*AGARPCLPWSKHFH
Trigger: GTGGAAGTGTTTGCTCCATGGGAGGCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGTCGCTGCAGACAGGCCGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp GGTAGACAGTCCTCATCCCAGTGTCCCTCTGAACTGCCGCGTGTGTaGCTCCAGCTTCTCAGCCTCCGCCTGGAGGTGCCCCAGCGCGGC +
Preference number: 6 (lower is better)
Translates to: GRQSSSQCPSELPRV*LQLLSLRLEVPQRG
Trigger: GCCGCGCTGGGGCACCTCCAGGCGGAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTCAGAGGGACACTGGGATGAGGACTGTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 72 bp CCTCATCCCAGTGTCCCTCTGAACTGCCGCGTGTGTTaGTCCAGCTTCTCAGCCTCCGCCTGGAGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: PHPSVPLNCRVC*SSFSASAWRCP
Trigger: GGGGCACCTCCAGGCGGAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTCAGAGGGACACTGGGATGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 72 bp TGCTTCTCTGGCTCCTTCAGGACCACGGGGCCCCGGTaGTGGGTAGGCACGTCATACACCTGGGAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: CFSGSFRTTGPR*WVGTSYTWEGR
Trigger: TCTGCCTTCCCAGGTGTATGACGTGCCTACCCAGCACCGGGGCCCCGTGGTCCTGAAGGAGCCAGAGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp CATAAACGGGGCCTGGAGTGGGAGGGCGGGGTAGAGTaGGCACCTGATAGGTCTCCTCTGAGCTGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: HKRGLEWEGGVE*APDRSPLSWQE
Trigger: CTCCTGCCAGCTCAGAGGAGACCTATCAGGTGCCCACTCTACCCCGCCCTCCCACTCCAGGCCCCGTTTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679887.1
CDS CAA 72 bp CTGTCTGCAGCGACCTCCGTGAGGATTTGGAGGCGGTaGGCAGGGGCCAGGCCTTGCCTCCCATGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: LSAATSVRIWRR*AGARPCLPWSK
Trigger: TTTGCTCCATGGGAGGCAAGGCCTGGCCCCTGCCAACCGCCTCCAAATCCTCACGGAGGTCGCTGCAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 72 bp TCCTCATCCCAGTGTCCCTCTGAACTGCCGCGTGTGTaGCTCCAGCTTCTCAGCCTCCGCCTGGAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: SSSQCPSELPRV*LQLLSLRLEVP
Trigger: GGGCACCTCCAGGCGGAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTCAGAGGGACACTGGGATGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp CTGCCACGGAGGATCTCGTTGCGCACGTCCCTCTCCTaGGTCTCCATGCACAGCGTGTCCACCAGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: LPRRISLRTSLS*VSMHSVSTSFC
Trigger: ACAGAAGCTGGTGGACACGCTGTGCATGGAGACCCAGGAGAGGGACGTGCGCAACGAGATCCTCCGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp ATGATCTCCGCGGGCTGGCTGCTGCTGAGGCTGCCGTaGAATGCGCTGATGGCTTTGAAGAGCGCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: MISAGWLLLRLP*NALMALKSAPK
Trigger: CTTTGGGGCGCTCTTCAAAGCCATCAGCGCATTTCACGGCAGCCTCAGCAGCAGCCAGCCCGCGGAGATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS GCA 72 bp GAGGTAGACAGTCCTCATCCCAGTGTCCCTCTGAACTaGCGCGTGTGTTGCTCCAGCTTCTCAGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: EVDSPHPSVPLN*RVCCSSFSASA
Trigger: GGCGGAGGCTGAGAAGCTGGAGCAACACACGCGGCAGTTCAGAGGGACACTGGGATGAGGACTGTCTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp CCCAACTCCTCATCTGCTCATAAACGGGGCCTGGAGTaGGAGGGCGGGGTAGAGTGGGCACCTGATAGGTCT +
Preference number: 6 (lower is better)
Translates to: PNSSSAHKRGLE*EGGVEWAPDRS
Trigger: AGACCTATCAGGTGCCCACTCTACCCCGCCCTCCCACTCCAGGCCCCGTTTATGAGCAGATGAGGAGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679887.1
CDS CCA 72 bp GGAACACCCTGCCCACTTGCTTGGCTGTCTGGGGGATaGAGTCCTGCCTTCTTGGGGCTGGCTGGTATGTCA +
Preference number: 6 (lower is better)
Translates to: GTPCPLAWLSGG*SPAFLGLAGMS
Trigger: TGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGTGGGCAGGGTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp AGGAGAGCTCCTTTGCTGACTCCTCCGAGGAAGAGCTaGAGGAGTCGTCGGTGGATGTGGTGGAGCACGAGG +
Preference number: 6 (lower is better)
Translates to: RRAPLLTPPRKS*RSRRWMWWSTR
Trigger: CCTCGTGCTCCACCACATCCACCGACGACTCCTCCAGCTCTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp CTTGGCCACATCCAGGTCCAAGGAGAGCTCCTTTGCTaGCTCCTCCGAGGAAGAGCTGGAGGAGTCGTCGGT +
Preference number: 6 (lower is better)
Translates to: LGHIQVQGELLC*LLRGRAGGVVG
Trigger: ACCGACGACTCCTCCAGCTCTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCCTTGGACCTGGATGTGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp CCATCACTGTCTCCTTGGCCACATCCAGGTCCAAGGAGAGCTCCTTaGCTGACTCCTCCGAGGAAGAGCTGGAGGAGTCGTCGGTGGATG +
Preference number: 6 (lower is better)
Translates to: PSLSPWPHPGPRRAP*LTPPRKSWRSRRWM
Trigger: CATCCACCGACGACTCCTCCAGCTCTTCCTCGGAGGAGTCAGCAAAGGAGCTCTCCTTGGACCTGGATGTGGCCAAGGAGACAGTGATGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp TCTGGGAAGCGTGAGGATGGCCTGATAGGTCTCCTCTaGGCTGGCAGGAGCTTCTTCCAGGCCTCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: SGKREDGLIGLL*AGRSFFQASQE
Trigger: TTCCTGAGAGGCCTGGAAGAAGCTCCTGCCAGCTCAGAGGAGACCTATCAGGCCATCCTCACGCTTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679529.1
CDS GCA 72 bp AAGAGCATCAGGCCAGCGACAGAGCTGACCACCTTGTaGTGCAGAGCCATCACTGTCTCCTTGGCCACATCC +
Preference number: 6 (lower is better)
Translates to: KSIRPATELTTL*CRAITVSLATS
Trigger: GGATGTGGCCAAGGAGACAGTGATGGCTCTGCAGCACAAGGTGGTCAGCTCTGTCGCTGGCCTGATGCTCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp AGAGGGCCAGGATTACTTGCTTGGCTGTCTGGGGGATaGAGTCCTGCCTTCTTGGGGCTGGCTGGTATGTCA +
Preference number: 6 (lower is better)
Translates to: RGPGLLAWLSGG*SPAFLGLAGMS
Trigger: TGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGTAATCCTGGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434344.2
CDS CAA 90 bp CCCATGGAGCAAACACTTCCACCAACCCTCGCTTTCTGGCACGTGTaGCTCCAGAATGGTCAGGATGTCCCCTCTGCTGAAAGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: PMEQTLPPTLAFWHV*LQNGQDVPSAESQL
Trigger: GAGCTGGCTTTCAGCAGAGGGGACATCCTGACCATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGGTGGAAGTGTTTGCTCCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp CGTGTTGCTCCAGAATGGTCAGGATGTCCCCTCTGCTaGAAGCCAGCTCGTCAGAGCAGTCAGGGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: RVAPEWSGCPLC*KPARQSSQGSC
Trigger: ACAACTGCCCTGACTGCTCTGACGAGCTGGCTTTCAGCAGAGGGGACATCCTGACCATTCTGGAGCAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp GAAAGTGGAGCTGGAACTGGGGAGAGCGTGGGGCCTTaGTTCTTCCGCAAAGCTGGTGAGAGGCGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: ESGAGTGESVGP*FFRKAGERRVS
Trigger: AGAAACACGCCTCTCACCAGCTTTGCGGAAGAATCAAGGCCCCACGCTCTCCCCAGTTCCAGCTCCACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp GGCTGTCTGGGGGATGGAGTCCTGCCTTCTTGGGGCTaGCTGGTATGTCATATAACTGCTGCTTCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: GCLGDGVLPSWG*LVCHITAASLA
Trigger: AGCCAGAGAAGCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp GGGACCTGGATCTGCCACTTGGAGGATTGTAGAAAGTaGAGCTGGAACTGGGGAGAGCGTGGGGCCTTGATT +
Preference number: 6 (lower is better)
Translates to: GTWICHLEDCRK*SWNWGERGALI
Trigger: AATCAAGGCCCCACGCTCTCCCCAGTTCCAGCTCCACTTTCTACAATCCTCCAAGTGGCAGATCCAGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp CCAGGATTACTTGCTTGGCTGTCTGGGGGATGGAGTCCTGCCTTCTaGGGGCTGGCTGGTATGTCATATAACTGCTGCTTCTCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: PGLLAWLSGGWSPAF*GLAGMSYNCCFSGS
Trigger: GGAGCCAGAGAAGCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAGTAATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434344.2
CDS CCA 72 bp TGCCACTTGGAGGATTGTAGAAAGTGGAGCTGGAACTaGGGAGAGCGTGGGGCCTTGATTCTTCCGCAAAGC +
Preference number: 6 (lower is better)
Translates to: CHLEDCRKWSWN*GERGALILPQS
Trigger: GCTTTGCGGAAGAATCAAGGCCCCACGCTCTCCCCAGTTCCAGCTCCACTTTCTACAATCCTCCAAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp TGGATCTGCCACTTGGAGGATTGTAGAAAGTGGAGCTaGAACTGGGGAGAGCGTGGGGCCTTGATTCTTCCG +
Preference number: 6 (lower is better)
Translates to: WICHLEDCRKWS*NWGERGALILP
Trigger: CGGAAGAATCAAGGCCCCACGCTCTCCCCAGTTCCAGCTCCACTTTCTACAATCCTCCAAGTGGCAGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 72 bp CTTGCTTGGCTGTCTGGGGGATGGAGTCCTGCCTTCTaGGGGCTGGCTGGTATGTCATATAACTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LAWLSGGWSPAF*GLAGMSYNCCF
Trigger: GAAGCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp TTGCTTGGCTGTCTGGGGGATGGAGTCCTGCCTTCTTaGGGCTGGCTGGTATGTCATATAACTGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: LLGCLGDGVLPS*GWLVCHITAAS
Trigger: AGAAGCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAGGACTCCATCCCCCAGACAGCCAAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp GGGGAAGTTGTCCGTCTGGAGAACCATGAGGAATTATaGCCCGCGGAATTCTCTGACACCTCCTTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: GEVVRLENHEEL*PAEFSDTSLAF
Trigger: GAAAGCCAAGGAGGTGTCAGAGAATTCCGCGGGCCATAATTCCTCATGGTTCTCCAGACGGACAACTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 72 bp CAAACACTTCCACCAACCCTCGCTTTCTGGCACGTGTaGCTCCAGAATGGTCAGGATGTCCCCTCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: QTLPPTLAFWHV*LQNGQDVPSAE
Trigger: TTCAGCAGAGGGGACATCCTGACCATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGGTGGAAGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS GCA 72 bp AAACACTTCCACCAACCCTCGCTTTCTGGCACGTGTTaGTCCAGAATGGTCAGGATGTCCCCTCTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: KHFHQPSLSGTC*SRMVRMSPLLK
Trigger: TTTCAGCAGAGGGGACATCCTGACCATTCTGGAGCAACACGTGCCAGAAAGCGAGGGTTGGTGGAAGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360314.7
ENST00000434344.2
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS GCA 72 bp GGAGGCAAACCTCTTGATGTCTTCTGGAAGCATCCGTaGCACCATGACAAACCTCTCAAGGTCATCTGGGCT +
Preference number: 6 (lower is better)
Translates to: GGKPLDVFWKHP*HHDKPLKVIWA
Trigger: AGCCCAGATGACCTTGAGAGGTTTGTCATGGTGGCACGGATGCTTCCAGAAGACATCAAGAGGTTTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp ATTCAGTTGTGGAGTGAGGGACCTGGATCTGCCACTTaGAGGATTGTAGAAAGTGGAGCTGGAACTGGGGAG +
Preference number: 6 (lower is better)
Translates to: IQLWSEGPGSAT*RIVESGAGTGE
Trigger: CTCCCCAGTTCCAGCTCCACTTTCTACAATCCTCCAAGTGGCAGATCCAGGTCCCTCACTCCACAACTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp ATCTGTCCGGTTCAGGAGATGGGGAAGTTGTCCGTCTaGAGAACCATGAGGAATTATGGCCCGCGGAATTCT +
Preference number: 6 (lower is better)
Translates to: ICPVQEMGKLSV*RTMRNYGPRNS
Trigger: AGAATTCCGCGGGCCATAATTCCTCATGGTTCTCCAGACGGACAACTTCCCCATCTCCTGAACCGGACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp TTGGAGATGGTCTGCATCTGGTCCCGAATTCTGTTCTaGAGGTTACTGTCAGTGAGGTTACAGGCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: LEMVCIWSRILF*RLLSVRLQAVP
Trigger: TGGGACTGCCTGTAACCTCACTGACAGTAACCTTCAGAACAGAATTCGGGACCAGATGCAGACCATCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp CAGGCCCAGCCTCAGAAAAGTATTTCTAAGAGTAGCTaGAGTCTGGGGGCTGATCAGACCATGGGCAATTTG +
Preference number: 6 (lower is better)
Translates to: QAQPQKSISKSS*SLGADQTMGNL
Trigger: CAAATTGCCCATGGTCTGATCAGCCCCCAGACTTCAGCTACTCTTAGAAATACTTTTCTGAGGCTGGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497244.1
CDS GCA 72 bp TGCGATTATCCAAGCTTTCCTTTGTTTCAAGCAGGATaGGGTAGGAGTTGGAGATGGTCTGCATCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: CDYPSFPLFQAG*GRSWRWSASGP
Trigger: GGGACCAGATGCAGACCATCTCCAACTCCTACCGCATCCTGCTTGAAACAAAGGAAAGCTTGGATAATCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp CTATGTGATCAGTGGACCTGTGGATTGCATCAATGTTaGCCTCCAGATAGTCTCGGAATCTCCACTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LCDQWTCGLHQC*PPDSLGISTSC
Trigger: GCAGGAAGTGGAGATTCCGAGACTATCTGGAGGCCAACATTGATGCAATCCACAGGTCCACTGATCACATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp ACCATGACAAACCTCTCAAGGTCATCTGGGCTGTTCTaGACACTGTCAGTCACAAGAACTTCCAGAGGCCAA +
Preference number: 6 (lower is better)
Translates to: TMTNLSRSSGLF*TLSVTRTSRGQ
Trigger: TTGGCCTCTGGAAGTTCTTGTGACTGACAGTGTCCAGAACAGCCCAGATGACCTTGAGAGGTTTGTCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CCA 72 bp GGCAATGACAATGGAGGCAAACCTCTTGATGTCTTCTaGAAGCATCCGTGCCACCATGACAAACCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: GNDNGGKPLDVF*KHPCHHDKPLK
Trigger: CTTGAGAGGTTTGTCATGGTGGCACGGATGCTTCCAGAAGACATCAAGAGGTTTGCCTCCATTGTCATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp GGTGTTCTGCTGTTCCACTCGGGGAATCAGAAAGCTTaGAGGAACCTTGTAGCTGACATCTTCATCCAAAGG +
Preference number: 6 (lower is better)
Translates to: GVLLFHSGNQKA*RNLVADIFIQR
Trigger: CCTTTGGATGAAGATGTCAGCTACAAGGTTCCTTCAAGCTTTCTGATTCCCCGAGTGGAACAGCAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 72 bp CTTCCAGAGGCCAATTGCGATTATCCAAGCTTTCCTTaGTTTCAAGCAGGATGCGGTAGGAGTTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: LPEANCDYPSFP*FQAGCGRSWRW
Trigger: CCATCTCCAACTCCTACCGCATCCTGCTTGAAACAAAGGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp TCACAAGAACTTCCAGAGGCCAATTGCGATTATCCAAGCTTTCCTTaGTTTCAAGCAGGATGCGGTAGGAGTTGGAGATGGTCTGCATCT +
Preference number: 6 (lower is better)
Translates to: SQELPEANCDYPSFP*FQAGCGRSWRWSAS
Trigger: AGATGCAGACCATCTCCAACTCCTACCGCATCCTGCTTGAAACAAAGGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAGTTCTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp TTAAAAAGGAGCCTTCCATTGGCAATGACAATGGAGGCAAACCTCTaGATGTCTTCTGGAAGCATCCGTGCCACCATGACAAACCTCTCA +
Preference number: 6 (lower is better)
Translates to: LKRSLPLAMTMEANL*MSSGSIRATMTNLS
Trigger: TGAGAGGTTTGTCATGGTGGCACGGATGCTTCCAGAAGACATCAAGAGGTTTGCCTCCATTGTCATTGCCAATGGAAGGCTCCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp TTTTCTGCATGGGCACATTGTTATTCAGTTGTGGAGTaGGGGACCTGGATCTGCCACTTGGAGGATTGTAGA +
Preference number: 6 (lower is better)
Translates to: FSAWAHCYSVVE*GTWICHLEDCR
Trigger: TCTACAATCCTCCAAGTGGCAGATCCAGGTCCCTCACTCCACAACTGAATAACAATGTGCCCATGCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp ACAGTCTCTTCCTTTTCACAGTTCCGCTTAAAAAGGAGCCTTCCATaGGCAATGACAATGGAGGCAAACCTCTTGATGTCTTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: TVSSFSQFRLKRSLP*AMTMEANLLMSSGS
Trigger: GCTTCCAGAAGACATCAAGAGGTTTGCCTCCATTGTCATTGCCAATGGAAGGCTCCTTTTTAAGCGGAACTGTGAAAAGGAAGAGACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp AATGTCACTGCATGCTTCTGGCTGGTTCTCAGAAACTaGATTCTATGGAGCTATGTCTCAATGCCTGACGTC +
Preference number: 6 (lower is better)
Translates to: NVTACFWLVLRN*ILWSYVSMPDV
Trigger: GACGTCAGGCATTGAGACATAGCTCCATAGAATTCAGTTTCTGAGAACCAGCCAGAAGCATGCAGTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360314.7
CDS CCA 72 bp AAATGGAACCAGTGTCTCCCCAAAGCCTATACACTATaGAAAGAGTCTCAGCATCTTAGTAGCCACTACTCC +
Preference number: 6 (lower is better)
Translates to: KWNQCLPKAYTL*KESQHLSSHYS
Trigger: GGAGTAGTGGCTACTAAGATGCTGAGACTCTTTCCATAGTGTATAGGCTTTGGGGAGACACTGGTTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497244.1
CDS CAA 72 bp TGGACACTGTCAGTCACAAGAACTTCCAGAGGCCAATaGCGATTATCCAAGCTTTCCTTTGTTTCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: WTLSVTRTSRGQ*RLSKLSFVSSR
Trigger: CCTGCTTGAAACAAAGGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAGTTCTTGTGACTGACAGTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 90 bp GAAATTCTCTTACAGATTCTTCTATGTGATCAGTGGACCTGTGGATaGCATCAATGTTGGCCTCCAGATAGTCTCGGAATCTCCACTTCC +
Preference number: 6 (lower is better)
Translates to: EILLQILLCDQWTCG*HQCWPPDSLGISTS
Trigger: GGAAGTGGAGATTCCGAGACTATCTGGAGGCCAACATTGATGCAATCCACAGGTCCACTGATCACATAGAAGAATCTGTAAGAGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS CAA 72 bp TCCTTTTCACAGTTCCGCTTAAAAAGGAGCCTTCCATaGGCAATGACAATGGAGGCAAACCTCTTGATGTCT +
Preference number: 6 (lower is better)
Translates to: SFSQFRLKRSLP*AMTMEANLLMS
Trigger: AGACATCAAGAGGTTTGCCTCCATTGTCATTGCCAATGGAAGGCTCCTTTTTAAGCGGAACTGTGAAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS TCA 72 bp AATGTCACTGCATGCTTCTGGCTGGTTCTCAGAAACTaGATTCTATGGAGCTATCTGACAACACATGGGAAA +
Preference number: 6 (lower is better)
Translates to: NVTACFWLVLRN*ILWSYLTTHGK
Trigger: TTTCCCATGTGTTGTCAGATAGCTCCATAGAATTCAGTTTCTGAGAACCAGCCAGAAGCATGCAGTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434344.2
ENST00000497244.1
ENST00000679887.1
CDS TCA 72 bp GCAAAATCCAGAAATTCTCTTACAGATTCTTCTATGTaGTCAGTGGACCTGTGGATTGCATCAATGTTGGCC +
Preference number: 6 (lower is better)
Translates to: AKSRNSLTDSSM*SVDLWIASMLA
Trigger: GGCCAACATTGATGCAATCCACAGGTCCACTGATCACATAGAAGAATCTGTAAGAGAATTTCTGGATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1
CDS GCA 72 bp TTCTTTAATAGTTCAGAAGAGTGTTCATCTTCCCTTTaGTTAGTGGAAGGGGTACTCTTTTGGTGTGATTCA +
Preference number: 6 (lower is better)
Translates to: FFNSSEECSSSL*LVEGVLFWCDS
Trigger: TGAATCACACCAAAAGAGTACCCCTTCCACTAAGCAAAGGGAAGATGAACACTCTTCTGAACTATTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360314.7
ENST00000497244.1
ENST00000679529.1
ENST00000679887.1