Pregenerated sensors for CASQ2 (Homo sapiens)
Ensembl gene IDs: ENSG00000118729Ensembl transcript IDs: ENST00000261448.6
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCTTTCTAGTTTTCCCCCACCCTCCACTCCTGCTGATGAATATGTaGGACTTGCCAACTAGAGGGAAGTTTAGAGAGCAAATCAACCTC | + |
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Preference number: 1 (lower is better) Translates to: IFLVFPHPPLLLMNM*DLPTRGKFREQINL Trigger: GAGGTTGATTTGCTCTCTAAACTTCCCTCTAGTTGGCAAGTCTCACATATTCATCAGCAGGAGTGGAGGGTGGGGGAAAACTAGAAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CCA 90 bp | TTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTaGCCAATTGTGGGAGTACTGATAACTGGAGAGTTAATTGACTGC | + |
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Preference number: 1 (lower is better) Translates to: FSASGHQYELQLLLP*PIVGVLITGELIDC Trigger: GCAGTCAATTAACTCTCCAGTTATCAGTACTCCCACAATTGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR TCA 90 bp | GTTGCCCTGGCCAATTGTGGGAGTACTGATAACTGGAGAGTTAATTaGCTGCTGGATAAAGCAATCTTTAATCTAAATGGGAAGGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: VALANCGSTDNWRVN*LLDKAIFNLNGKAH Trigger: GTGAGCCTTCCCATTTAGATTAAAGATTGCTTTATCCAGCAGTCAATTAACTCTCCAGTTATCAGTACTCCCACAATTGGCCAGGGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CAA 90 bp | GAGATGATGGAAAAGGGAAAGGAGCTGGCTGGGTGTGGGGCAGAATaGCTTGCTGCCACCTTGTGCTGTCTGTATGGTAGTGGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: EMMEKGKELAGCGAE*LAATLCCLYGSGCC Trigger: ACAGCACCCACTACCATACAGACAGCACAAGGTGGCAGCAAGCAATTCTGCCCCACACCCAGCCAGCTCCTTTCCCTTTTCCATCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR GCA 90 bp | GGGATTGTTCACCCTAGACTGCCATGTTCAGGCACTGCCATGACCCTTGATGGTCTTGCTGCCACCTTGTaGTGTCTGTATGGTAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GIVHPRLPCSGTAMTLDGLAATL*CLYGSG Trigger: CCCACTACCATACAGACAGCACAAGGTGGCAGCAAG...ACCATCAAGGGTCATGGCAGTGCCTGAACATGGCAGTCTAGGGTGAACAATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCTAAGAAGGATCATCTTGGCTGGAGGAGGGATCCCAACTGATGTTCGAGGGAAAGGAGCTGGCTaGGTGTGGGGCAGAATTGCT | + |
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Preference number: 2 (lower is better) Translates to: PSLRRIILAGGGIPTDVRGKGAG*VWGRIA Trigger: AGCAATTCTGCCCCACACCCAGCCAGCTCCTTTCCC...TCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGTGGGGCAGAATTGCTTaGTGCCACCTTGTGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KRHLLNDAAPDAKGVGKEWGRIA*CHLVLS Trigger: AGACAGCACAAGGTGGCAGCAAGCAATTCTGCCCCA...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CAA 90 bp | TATAAGTTTGCTTCCAAGGCTGAGCCTTCTCTAAGAAGGATCATCTaGGCTGGAGGAGGGATCCCAACTGATGTTCGAGGTATGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: YKFASKAEPSLRRII*AGGGIPTDVRGMEG Trigger: TCCCTCCATACCTCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGGCTCAGCCTTGGAAGCAAACTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR GCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAAGGTGTGGGGCAGAATTaGTTGCTGCCACCTTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GMEGAKSLIMCLPWALIKGVGQN*LLPPCA Trigger: AGCACAAGGTGGCAGCAAGCAATTCTGCCCCACACC...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCATTGTTCACCCTAGACTaGCATGTTCAGGCACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: FFSASGHQYELQLLLPWPLFTLD*HVQALP Trigger: TGGCAGTGCCTGAACATGGCAGTCTAGGGTGAACAA...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR TCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTGTTCAGGCACTGCCATaGCCCTTGATGGTCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: QINLPSQFPNILEMMVTPVQALP*PLMVQQ Trigger: TTGCTGGACCATCAAGGGTCATGGCAGTGCCTGAAC...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATGGCAGAATTGCTTGCTaGCACCTTGTGCTGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNGRIAC*HLVLSV Trigger: TACAGACAGCACAAGGTGGCAGCAAGCAATTCTGCC...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR TCA 90 bp | AAATGGGAAGGCTCACTAGCAGCTACAGAGAAGGGGTATTCAGATCCCAGCTTAGTCACTCTATGCCTGTaGGTTAGAAAGCTGTCAATT | + |
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Preference number: 2 (lower is better) Translates to: KWEGSLAATEKGYSDPSLVTLCL*VRKLSI Trigger: AATTGACAGCTTTCTAACTCACAGGCATAGAGTGAC...TAAGCTGGGATCTGAATACCCCTTCTCTGTAGCTGCTAGTGAGCCTTCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCAAGCCATCCAAAGGCTTaGATATCCAAGTTCATAGTG | + |
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Preference number: 2 (lower is better) Translates to: FFSASGHQYELQLLLPWPSHPKA*ISKFIV Trigger: CACTATGAACTTGGATATTCAAGCCTTTGGATGGCT...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR TCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTACAAGATCTGTTCCGTaGCAGTCAAGACAGTCAACA | + |
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Preference number: 2 (lower is better) Translates to: QINLPSQFPNILEMMVTPTRSVP*QSRQST Trigger: TGTTGACTGTCTTGACTGTCACGGAACAGATCTTGT...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR GCA 72 bp | GCTGGGTGTGGGGCAGAATTGCTTGCTGCCACCTTGTaGTGTCTGTATGGTAGTGGGTGCTGTGATTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: AGCGAELLAATL*CLYGSGCCDFV Trigger: AACAAAATCACAGCACCCACTACCATACAGACAGCACAAGGTGGCAGCAAGCAATTCTGCCCCACACCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR CAA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAAGGGTGTGGGGCAGAATaGCTTGCTGCCACCTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: GMEGAKSLIMCLPWALIKGCGAE*LAATLC Trigger: GCACAAGGTGGCAGCAAGCAATTCTGCCCCACACCC...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCACTAAGAAGGATCATCTaGGCTGGAGGAGGGATCCCA | + |
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Preference number: 3 (lower is better) Translates to: FFSASGHQYELQLLLPWPLRRII*AGGGIP Trigger: TGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAG...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR TCA 72 bp | TTGTTCACCCTAGACTGCCATGTTCAGGCACTGCCATaGCCCTTGATGGTCCAGCAAAGAACAAGATCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LFTLDCHVQALP*PLMVQQRTRSV Trigger: AACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCATGGCAGTGCCTGAACATGGCAGTCTAGGGTGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCATTGCTTGCTGCCACCTaGTGCTGTCTGTATGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: FFSASGHQYELQLLLPWPLLAAT*CCLYGS Trigger: ACTACCATACAGACAGCACAAGGTGGCAGCAAGCAA...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR CAA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAAACTTGTGTTAGGGGATaGTTCACCCTAGACTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: GMEGAKSLIMCLPWALIKTCVRG*FTLDCH Trigger: ATGGCAGTCTAGGGTGAACAATCCCCTAACACAAGT...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CCA 72 bp | ATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTaGGCTCTGATTAAAAGGTCACTCTATGCCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: MEGAKSLIMCLP*ALIKRSLYACE Trigger: CTCACAGGCATAGAGTGACCTTTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CCA 72 bp | TCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTaGCCAATTGTGGGAGTACTGATAACTGGAGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SGHQYELQLLLP*PIVGVLITGEL Trigger: TAACTCTCCAGTTATCAGTACTCCCACAATTGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR-3UTR CAA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAACATTTGAAAAGGCATTaGCTGAATGATGCTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: GMEGAKSLIMCLPWALIKHLKRH*LNDAAP Trigger: AGGAGCAGCATCATTCAGCAAATGCCTTTTCAAATG...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR TCA 72 bp | GCCAATTGTGGGAGTACTGATAACTGGAGAGTTAATTaGCTGCTGGATAAAGCAATCTTTAATCTAAATGGG | + |
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Preference number: 3 (lower is better) Translates to: ANCGSTDNWRVN*LLDKAIFNLNG Trigger: CCCATTTAGATTAAAGATTGCTTTATCCAGCAGTCAATTAACTCTCCAGTTATCAGTACTCCCACAATTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CAA 72 bp | CTGGCTGGGTGTGGGGCAGAATTGCTTGCTGCCACCTaGTGCTGTCTGTATGGTAGTGGGTGCTGTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: LAGCGAELLAAT*CCLYGSGCCDF Trigger: AAAATCACAGCACCCACTACCATACAGACAGCACAAGGTGGCAGCAAGCAATTCTGCCCCACACCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CAA 72 bp | GCTTCCAAGGCTGAGCCTTCTCTAAGAAGGATCATCTaGGCTGGAGGAGGGATCCCAACTGATGTTCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: ASKAEPSLRRII*AGGGIPTDVRG Trigger: ACCTCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGGCTCAGCCTTGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | GGGATTGTTCACCCTAGACTGCCATGTTCAGGCACTGCCATGACCCTTGATGGTCACTGTCAGCATCTGTaGCATTCACCACCCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: GIVHPRLPCSGTAMTLDGHCQHL*HSPPQS Trigger: AGATTGGGGTGGTGAATGTCACAGATGCTGACAGTG...ACCATCAAGGGTCATGGCAGTGCCTGAACATGGCAGTCTAGGGTGAACAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGTGCCCTTCCTGGGGCTaGAAAGTGACTCTTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: KRHLLNDAAPDAKGVGKECPSWG*KVTLHL Trigger: GAGGTGAAGAGTCACTTTTCAGCCCCAGGAAGGGCA...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | GGGATTGTTCACCCTAGACTGCCATGTTCAGGCACTGCCATGACCCTTGATGGTGTTTGCTTCCAAGGCTaGGCCTTCTCTAAGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GIVHPRLPCSGTAMTLDGVCFQG*AFSKKD Trigger: ATCCTTCTTAGAGAAGGCTCAGCCTTGGAAGCAAAC...ACCATCAAGGGTCATGGCAGTGCCTGAACATGGCAGTCTAGGGTGAACAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACACCTGGGGCTGAAAAGTaGCTCTTCACCTCCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: MTLDGPAKNKICSVTVKTPGAEK*LFTSLG Trigger: ACCCAAGGAGGTGAAGAGTCACTTTTCAGCCCCAGG...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCAGTTCAGGCACTGCCATaGCCCTTGATGGTCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: FFSASGHQYELQLLLPWPVQALP*PLMVQQ Trigger: TTGCTGGACCATCAAGGGTCATGGCAGTGCCTGAAC...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGGTGTGGGGCAGAATTaGTTGCTGCCACCTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: MTLDGPAKNKICSVTVKTGVGQN*LLPPCA Trigger: AGCACAAGGTGGCAGCAAGCAATTCTGCCCCACACC...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | AAATGGGAAGGCTCACTAGCAGCTACAGAGAAGGGGTATTCAGATCCCAGCTTACACTGCCATGACCCTTaGTGGTCCAGCAAAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: KWEGSLAATEKGYSDPSLHCHDP*WSSKEQ Trigger: TTGTTCTTTGCTGGACCATCAAGGGTCATGGCAGTG...TAAGCTGGGATCTGAATACCCCTTCTCTGTAGCTGCTAGTGAGCCTTCCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGGGCAGAATTGCTTGCTaGCACCTTGTGCTGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: KRHLLNDAAPDAKGVGKEGRIAC*HLVLSV Trigger: TACAGACAGCACAAGGTGGCAGCAAGCAATTCTGCC...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | AAATGGGAAGGCTCACTAGCAGCTACAGAGAAGGGGTATTCAGATCCCAGCTTAATGCGTTCGAAGGCTTaGACTTCCAGTTTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KWEGSLAATEKGYSDPSLMRSKA*TSSLLL Trigger: CAGCAGCAAACTGGAAGTCCAAGCCTTCGAACGCAT...TAAGCTGGGATCTGAATACCCCTTCTCTGTAGCTGCTAGTGAGCCTTCCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTAAGAAGGATCATCTTGGCTGGAGGAGGGATCCCAACTGATGTTCGACTGTGTAAGGTTTGTTaGGGATGGCAATGGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PSLRRIILAGGGIPTDVRLCKVC*GWQWAH Trigger: ATGAGCCCATTGCCATCCCCAACAAACCTTACACAG...TCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGCAGGCGACGTAGAGTaGGTCTTTGGTGTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: MTLDGPAKNKICSVTVKTAGDVE*VFGVPS Trigger: TGAAGGAACACCAAAGACCCACTCTACGTCGCCTGC...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGCAGCTCCTCAGCAGTTaGAAGATCGTCATCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: KRHLLNDAAPDAKGVGKEQLLSS*KIVIIW Trigger: CCAGATGATGACGATCTTCCAACTGCTGAGGAGCTG...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAAGGTCGATCCACAGGATaGTCAGATCGGGGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GMEGAKSLIMCLPWALIKGRSTG*SDRGCQ Trigger: CTGACAACCCCGATCTGAGCATCCTGTGGATCGACC...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATTGGGGCAGAATTGCTTaGTGCCACCTTGTGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNWGRIA*CHLVLS Trigger: AGACAGCACAAGGTGGCAGCAAGCAATTCTGCCCCA...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACATTATGTTCAAGGACCTaGGCCACAAGCTCAAGCACG | + |
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Preference number: 4 (lower is better) Translates to: MTLDGPAKNKICSVTVKTLCSRT*ATSSST Trigger: CGTGCTTGAGCTTGTGGCCCAGGTCCTTGAACATAA...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTAAGAAGGATCATCTTGGCTGGAGGAGGGATCCCAACTGATGTTCGAGGGCTCATCCATAAATaGCTCATAGAAGTCAACCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLRRIILAGGGIPTDVRGLIHK*LIEVNL Trigger: GAGGTTGACTTCTATGAGCCATTTATGGATGAGCCC...TCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAAGAGAGCAGACAGGCTaGTTTTCTCTCTTCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: MTLDGPAKNKICSVTVKTREQTG*FSLFFA Trigger: GGCAAAGAAGAGAGAAAATCAGCCTGTCTGCTCTCT...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTAAGAAGGATCATCTTGGCTGGAGGAGGGATCCCAACTGATGTTCGATCTCGTTCCCAAATATaGTGTGTGCAGAATAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSLRRIILAGGGIPTDVRSRSQI*CVQNRG Trigger: TCCTCTATTCTGCACACAGCATATTTGGGAACGAGA...TCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCACACCAAGACATCAGCTaGAAACTCGCCATCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: FFSASGHQYELQLLLPWPHQDIS*KLAIKL Trigger: GAGTTTGATGGCGAGTTTGCAGCTGATGTCTTGGTG...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGGTTTCTTGGCAAGCTTaGCTTCTTTCTTGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRHLLNDAAPDAKGVGKEVSWQA*LLSWHP Trigger: TGGATGCCAAGAAAGAAGCCAAGCTTGCCAAGAAAC...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACACGTAGAGTGGGTCTTTaGTGTTCCTTCACAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTLDGPAKNKICSVTVKTRRVGL*CSFTNS Trigger: GGAGTTTGTGAAGGAACACCAAAGACCCACTCTACG...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTAAGAAGGATCATCTTGGCTGGAGGAGGGATCCCAACTGATGTTCGAGAATTCGTAGCCATCTaGATCACTCTTCTCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSLRRIILAGGGIPTDVREFVAI*ITLLCK Trigger: TTTGCAGAGAAGAGTGATCCAGATGGCTACGAATTC...TCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| 3UTR CAA 72 bp | AGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTaGCCCTGGCCAATTGTGGGAGTACTGATAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SASGHQYELQLL*PWPIVGVLITG Trigger: TCCAGTTATCAGTACTCCCACAATTGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | AAATGGGAAGGCTCACTAGCAGCTACAGAGAAGGGGTATTCAGATCCCAGCTTAAGCCATCCAAAGGCTTaGATATCCAAGTTCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWEGSLAATEKGYSDPSLSHPKA*ISKFIV Trigger: CACTATGAACTTGGATATTCAAGCCTTTGGATGGCT...TAAGCTGGGATCTGAATACCCCTTCTCTGTAGCTGCTAGTGAGCCTTCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATCTGCTGATGAATATGTaGGACTTGCCAACTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNLLMNM*DLPTRG Trigger: CCCTCTAGTTGGCAAGTCTCACATATTCATCAGCAG...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAATTGTTCACCCTAGACTaGCATGTTCAGGCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMEGAKSLIMCLPWALIKLFTLD*HVQALP Trigger: TGGCAGTGCCTGAACATGGCAGTCTAGGGTGAACAA...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR TCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTTTGCGTGACCTTATCTaGAGACACCGGCTCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QINLPSQFPNILEMMVTPLRDLI*RHRLMV Trigger: TACCATGAGCCGGTGTCTTCAGATAAGGTCACGCAA...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAAGGAACTGTTTTTGCGTaGCCTTATCTGAAGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: GMEGAKSLIMCLPWALIKGTVFA*PYLKTP Trigger: CGGTGTCTTCAGATAAGGTCACGCAAAAACAGTTCC...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATACAAGATCTGTTCCGTaGCAGTCAAGACAGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNTRSVP*QSRQST Trigger: TGTTGACTGTCTTGACTGTCACGGAACAGATCTTGT...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR CCA 90 bp | AAATGGGAAGGCTCACTAGCAGCTACAGAGAAGGGGTATTCAGATCCCAGCTTAACGATTTCTTTCAGTTaGAACTGTTTTTGCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KWEGSLAATEKGYSDPSLTISFS*NCFCVT Trigger: GGTCACGCAAAAACAGTTCCAACTGAAAGAAATCGT...TAAGCTGGGATCTGAATACCCCTTCTCTGTAGCTGCTAGTGAGCCTTCCCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR TCA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCATCTTTAAAACCTGCTTaGAGTTCTTCTCGGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFSASGHQYELQLLLPWPSLKPA*SSSRKD Trigger: GTCTTTCCGAGAAGAACTTCAAGCAGGTTTTAAAGA...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR GCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAATGGATCACTCTTCTCTaGAAAGGCCACAATGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GMEGAKSLIMCLPWALIKWITLL*KGHNVD Trigger: ATCCACATTGTGGCCTTTGCAGAGAAGAGTGATCCA...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATAACTGGAGAGTTAATTaGCTGCTGGATAAAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNNWRVN*LLDKAI Trigger: GATTGCTTTATCCAGCAGTCAATTAACTCTCCAGTT...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR TCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTCTCAGGGCATCAGTATaGACTCCAATTATTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QINLPSQFPNILEMMVTPLRASV*TPIIVA Trigger: GGCAACAATAATTGGAGTTCATACTGATGCCCTGAG...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR GCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAACCCAAATATGCTGTGTaGAGAATAGAGGACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GMEGAKSLIMCLPWALIKPKYAV*RIEDRR Trigger: TCTTCTGTCCTCTATTCTGCACACAGCATATTTGGG...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGGGAGAGTTAATTGACTaGTGGATAAAGCAATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KRHLLNDAAPDAKGVGKEGELID*WIKQSL Trigger: TAAAGATTGCTTTATCCAGCAGTCAATTAACTCTCC...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCAAGAATTGTTTGGAGTTaGGCTATTCATCATCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: FFSASGHQYELQLLLPWPRIVWS*AIHHHR Trigger: ACGATGATGATGAATAGCCCAACTCCAAACAATTCT...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAAATCATGTGTCTTCCCTaGGCTCTGATTAAAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMEGAKSLIMCLPWALIKIMCLP*ALIKRS Trigger: TGACCTTTTAATCAGAGCCCAGGGAAGACACATGAT...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR TCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTAGGTGGCAAAGAATTTaGTGTAAGGCTGGAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QINLPSQFPNILEMMVTPRWQRI*CKAGSV Trigger: AACACTTCCAGCCTTACATCAAATTCTTTGCCACCT...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR TCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTGTCACTCTATGCCTGTaGGTTAGAAAGCTGTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QINLPSQFPNILEMMVTPVTLCL*VRKLSI Trigger: AATTGACAGCTTTCTAACTCACAGGCATAGAGTGAC...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR GCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTCTGGAAGTGTTCAGCTaGTTCTTCAAAAGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QINLPSQFPNILEMMVTPLEVFS*FFKSLV Trigger: TACAAGGCTTTTGAAGAAGCAGCTGAACACTTCCAG...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR GCA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTAGTTGGAACTGTTTTTaGGTGACCTTATCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QINLPSQFPNILEMMVTPSWNCF*VTLSED Trigger: GTCTTCAGATAAGGTCACGCAAAAACAGTTCCAACT...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CCA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAATTCATCAGAATTGTTTaGAGTTGGGCTATTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMEGAKSLIMCLPWALIKFIRIV*SWAIHH Trigger: ATGATGAATAGCCCAACTCCAAACAATTCTGATGAA...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS GCA 90 bp | AGTAGGCAACGAGCAGAGGAAAGTCGTCCGGGTCGATCCACAGGATaGTCAGATCGGGGTTGTCAGTATTGTCCCGGGCAACCTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRQRAEESRPGRSTG*SDRGCQYCPGQPVS Trigger: TGAAACAGGTTGCCCGGGACAATACTGACAACCCCGATCTGAGCATCCTGTGGATCGACCCGGACGACTTTCCTCTGCTCGTTGCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | GGGATTGTTCACCCTAGACTGCCATGTTCAGGCACTGCCATGACCCTTGATGGTAGCTTGGCTTCTTTCTaGGCATCCACCATCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GIVHPRLPCSGTAMTLDGSLASF*ASTITK Trigger: CTTTGTGATGGTGGATGCCAAGAAAGAAGCCAAGCT...ACCATCAAGGGTCATGGCAGTGCCTGAACATGGCAGTCTAGGGTGAACAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATGGGTGTGGGGCAGAATaGCTTGCTGCCACCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNGCGAE*LAATLC Trigger: GCACAAGGTGGCAGCAAGCAATTCTGCCCCACACCC...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGCTGTTAGAGGCCTTGTaGAGCCAAGGAGAGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KRHLLNDAAPDAKGVGKELLEAL*SQGESR Trigger: TCTGCTCTCTCCTTGGCTCAACAAGGCCTCTAACAG...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCATCGGGGTTGTCAGTATaGTCCCGGGCAACCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFSASGHQYELQLLLPWPSGLSV*SRATCF Trigger: GAAACAGGTTGCCCGGGACAATACTGACAACCCCGA...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCAATGCTCAGATCGGGGTaGTCAGTATTGTCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FFSASGHQYELQLLLPWPMLRSG*SVLSRA Trigger: TGCCCGGGACAATACTGACAACCCCGATCTGAGCAT...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAAGACTGTTAGAGGCCTaGTTGAGCCAAGGAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MTLDGPAKNKICSVTVKTRLLEA*LSQGES Trigger: GCTCTCTCCTTGGCTCAACAAGGCCTCTAACAGTCT...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCAAATGCGTTCGAAGGCTaGGACTTCCAGTTTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FFSASGHQYELQLLLPWPNAFEG*DFQFAA Trigger: AGCAGCAAACTGGAAGTCCAAGCCTTCGAACGCATT...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | ATGACCCTTGATGGTCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACATTGCTTGCTGCCACCTaGTGCTGTCTGTATGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: MTLDGPAKNKICSVTVKTLLAAT*CCLYGS Trigger: ACTACCATACAGACAGCACAAGGTGGCAGCAAGCAA...TGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGACCATCAAGGGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS TCA 90 bp | CCACAAGCTCAAGCACGATTTCTTTCAGTTGGAACTGTTTTTGCGTaGCCTTATCTGAAGACACCGGCTCATGGTAGTAGAGGCAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQAQARFLSVGTVFA*PYLKTPAHGSRGKA Trigger: TGCTTTGCCTCTACTACCATGAGCCGGTGTCTTCAGATAAGGTCACGCAAAAACAGTTCCAACTGAAAGAAATCGTGCTTGAGCTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCAAGTTTCTTGGCAAGCTaGGCTTCTTTCTTGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FFSASGHQYELQLLLPWPSFLAS*ASFLAS Trigger: GGATGCCAAGAAAGAAGCCAAGCTTGCCAAGAAACT...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATGCTTGGACTTCCAGTTaGCTGCTGATGATCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNAWTSS*LLMIST Trigger: AGTGGAGATCATCAGCAGCAAACTGGAAGTCCAAGC...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTAAGAAGGATCATCTTGGCTGGAGGAGGGATCCCAACTGATGTTCGATTCTTTGCAACCCCTTaGTCAAAGGTGGCAAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSLRRIILAGGGIPTDVRFFATP*SKVAKN Trigger: ATTCTTTGCCACCTTTGACAAAGGGGTTGCAAAGAA...TCGAACATCAGTTGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAACTAAGAAGGATCATCTaGGCTGGAGGAGGGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GMEGAKSLIMCLPWALIKLRRII*AGGGIP Trigger: TGGGATCCCTCCTCCAGCCAAGATGATCCTTCTTAG...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCAGAACTCCAATTATTGTaGCCCTGGCCAATTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FFSASGHQYELQLLLPWPELQLL*PWPIVG Trigger: TCCCACAATTGGCCAGGGCAACAATAATTGGAGTTC...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | AAAAGGCATTTGCTGAATGATGCTGCTCCTGACGCAAAGGGAGTGGGAAAAGAGTATGAACTCCAATTATaGTTGCCCTGGCCAATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KRHLLNDAAPDAKGVGKEYELQL*LPWPIV Trigger: CACAATTGGCCAGGGCAACAATAATTGGAGTTCATA...CTCTTTTCCCACTCCCTTTGCGTCAGGAGCAGCATCATTCAGCAAATGCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR CAA 90 bp | TTTTTCAGTGCCTCAGGGCATCAGTATGAACTCCAATTATTGTTGCCCTGGCCACAGAATTGTTTGGAGTaGGGCTATTCATCATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: FFSASGHQYELQLLLPWPQNCLE*GYSSSS Trigger: CGATGATGATGAATAGCCCAACTCCAAACAATTCTG...TGGCCAGGGCAACAATAATTGGAGTTCATACTGATGCCCTGAGGCACTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR CAA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATCATTTGAAAAGGCATTaGCTGAATGATGCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNHLKRH*LNDAAP Trigger: AGGAGCAGCATCATTCAGCAAATGCCTTTTCAAATG...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR CAA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTACTTGTGTTAGGGGATaGTTCACCCTAGACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QINLPSQFPNILEMMVTPTCVRG*FTLDCH Trigger: ATGGCAGTCTAGGGTGAACAATCCCCTAACACAAGT...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS TCA 90 bp | CATGGTAGTAGAGGCAAAGCAAGTCATATTTCTTTAAAACCTGCTTaGAGTTCTTCTCGGAAAGACTTACCACTCGGTCCTTCCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HGSRGKASHISLKPA*SSSRKDLPLGPSHH Trigger: ATGATGGGAAGGACCGAGTGGTAAGTCTTTCCGAGAAGAACTTCAAGCAGGTTTTAAAGAAATATGACTTGCTTTGCCTCTACTACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS TCA 90 bp | AAGCACGATTTCTTTCAGTTGGAACTGTTTTTGCGTGACCTTATCTaGAGACACCGGCTCATGGTAGTAGAGGCAAAGCAAGTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: KHDFFQLELFLRDLI*RHRLMVVEAKQVIF Trigger: AAATATGACTTGCTTTGCCTCTACTACCATGAGCCGGTGTCTTCAGATAAGGTCACGCAAAAACAGTTCCAACTGAAAGAAATCGTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS-3UTR CAA 90 bp | TCCAGCAAAGAACAAGATCTGTTCCGTGACAGTCAAGACAGTCAACATGGGAATTCAAAGATAATTTCTTaGCAACCCCTTTGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSKEQDLFRDSQDSQHGNSKIIS*QPLCQR Trigger: CCTTTGACAAAGGGGTTGCAAAGAAATTATCTTTGA...ATTCCCATGTTGACTGTCTTGACTGTCACGGAACAGATCTTGTTCTTTGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
||
| CDS TCA 90 bp | AAGATAATTTCTTTGCAACCCCTTTGTCAAAGGTGGCAAAGAATTTaGTGTAAGGCTGGAAGTGTTCAGCTGCTTCTTCAAAAGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: KIISLQPLCQRWQRI*CKAGSVQLLLQKPC Trigger: ACAAGGCTTTTGAAGAAGCAGCTGAACACTTCCAGCCTTACATCAAATTCTTTGCCACCTTTGACAAAGGGGTTGCAAAGAAATTATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | GGTATGGAGGGAGCTAAATCATTAATCATGTGTCTTCCCTGGGCTCTGATTAAATTTCATCAGAATTGTTaGGAGTTGGGCTATTCATCA | + |
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Preference number: 5 (lower is better) Translates to: GMEGAKSLIMCLPWALIKFHQNC*ELGYSS Trigger: TGATGAATAGCCCAACTCCAAACAATTCTGATGAAA...TTTAATCAGAGCCCAGGGAAGACACATGATTAATGATTTAGCTCCCTCCATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS-3UTR CAA 90 bp | CAAATCAACCTCCCATCCCAGTTTCCTAATATACTAGAAATGATGGTGACACCTGTGAGTTCTCTTCATTaGGGAAAACTTTTGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QINLPSQFPNILEMMVTPVSSLH*GKLLFL Trigger: GAGAAACAAAAGTTTTCCCAAATGAAGAGAACTCAC...AGGTGTCACCATCATTTCTAGTATATTAGGAAACTGGGATGGGAGGTTGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS GCA 72 bp | CGAGCAGAGGAAAGTCGTCCGGGTCGATCCACAGGATaGTCAGATCGGGGTTGTCAGTATTGTCCCGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RAEESRPGRSTG*SDRGCQYCPGQ Trigger: TTGCCCGGGACAATACTGACAACCCCGATCTGAGCATCCTGTGGATCGACCCGGACGACTTTCCTCTGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CAA 72 bp | TCGTCCGGGTCGATCCACAGGATGCTCAGATCGGGGTaGTCAGTATTGTCCCGGGCAACCTGTTTCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: SSGSIHRMLRSG*SVLSRATCFRI Trigger: GATCCTGAAACAGGTTGCCCGGGACAATACTGACAACCCCGATCTGAGCATCCTGTGGATCGACCCGGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CAA 72 bp | GTGTGCAGAATAGAGGACAGAAGACTGTTAGAGGCCTaGTTGAGCCAAGGAGAGAGCAGACAGGCTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: VCRIEDRRLLEA*LSQGESRQADF Trigger: AAAATCAGCCTGTCTGCTCTCTCCTTGGCTCAACAAGGCCTCTAACAGTCTTCTGTCCTCTATTCTGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CCA 72 bp | ACCTGGGCCACAAGCTCAAGCACGATTTCTTTCAGTTaGAACTGTTTTTGCGTGACCTTATCTGAAGACACC | + |
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Preference number: 6 (lower is better) Translates to: TWATSSSTISFS*NCFCVTLSEDT Trigger: GGTGTCTTCAGATAAGGTCACGCAAAAACAGTTCCAACTGAAAGAAATCGTGCTTGAGCTTGTGGCCCAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CAA 72 bp | AATGAGTTTGATGTAGTCTTCAATGCGTTCGAAGGCTaGGACTTCCAGTTTGCTGCTGATGATCTCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: NEFDVVFNAFEG*DFQFAADDLHW Trigger: CCAGTGGAGATCATCAGCAGCAAACTGGAAGTCCAAGCCTTCGAACGCATTGAAGACTACATCAAACTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CAA 90 bp | CCTTCTTCATCAAAACCCAGTTTCTTGGCAAGCTTGGCTTCTTTCTaGGCATCCACCATCACAAAGCCTATAGCTTTATGTTCAAGGACC | + |
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Preference number: 6 (lower is better) Translates to: PSSSKPSFLASLASF*ASTITKPIALCSRT Trigger: GGTCCTTGAACATAAAGCTATAGGCTTTGTGATGGTGGATGCCAAGAAAGAAGCCAAGCTTGCCAAGAAACTGGGTTTTGATGAAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CAA 90 bp | GAAAAAGCCAATGAGTTTGATGTAGTCTTCAATGCGTTCGAAGGCTaGGACTTCCAGTTTGCTGCTGATGATCTCCACTGGGTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: EKANEFDVVFNAFEG*DFQFAADDLHWVFN Trigger: ATTGAAGACCCAGTGGAGATCATCAGCAGCAAACTGGAAGTCCAAGCCTTCGAACGCATTGAAGACTACATCAAACTCATTGGCTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS TCA 72 bp | TTCTTTCAGTTGGAACTGTTTTTGCGTGACCTTATCTaGAGACACCGGCTCATGGTAGTAGAGGCAAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FFQLELFLRDLI*RHRLMVVEAKQ Trigger: TTGCTTTGCCTCTACTACCATGAGCCGGTGTCTTCAGATAAGGTCACGCAAAAACAGTTCCAACTGAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS TCA 72 bp | CAAGCACGATTTCTTTCAGTTGGAACTGTTTTTGCGTaGCCTTATCTGAAGACACCGGCTCATGGTAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: QARFLSVGTVFA*PYLKTPAHGSR Trigger: TCTACTACCATGAGCCGGTGTCTTCAGATAAGGTCACGCAAAAACAGTTCCAACTGAAAGAAATCGTGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CCA 72 bp | TTCCTTCTTCATCAAAACCCAGTTTCTTGGCAAGCTTaGCTTCTTTCTTGGCATCCACCATCACAAAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: FLLHQNPVSWQA*LLSWHPPSQSL Trigger: TAGGCTTTGTGATGGTGGATGCCAAGAAAGAAGCCAAGCTTGCCAAGAAACTGGGTTTTGATGAAGAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CAA 90 bp | TTGCTGCCACCTTGTGCTGTCTGTATGGTAGTGGGTGCTGTGATTTaGTTTTCATCAGAATTGTTTGGAGTTGGGCTATTCATCATCATC | + |
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Preference number: 6 (lower is better) Translates to: LLPPCAVCMVVGAVI*FSSELFGVGLFIII Trigger: GATGATGATGAATAGCCCAACTCCAAACAATTCTGATGAAAACAAAATCACAGCACCCACTACCATACAGACAGCACAAGGTGGCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS TCA 72 bp | TCTTTGCAACCCCTTTGTCAAAGGTGGCAAAGAATTTaGTGTAAGGCTGGAAGTGTTCAGCTGCTTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SLQPLCQRWQRI*CKAGSVQLLLQ Trigger: TTGAAGAAGCAGCTGAACACTTCCAGCCTTACATCAAATTCTTTGCCACCTTTGACAAAGGGGTTGCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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| CDS CAA 90 bp | GCTGTCTGTATGGTAGTGGGTGCTGTGATTTTGTTTTCATCAGAATaGTTTGGAGTTGGGCTATTCATCATCATCGTCATCACTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: AVCMVVGAVILFSSE*FGVGLFIIIVITVI Trigger: GATGACAGTGATGACGATGATGATGAATAGCCCAACTCCAAACAATTCTGATGAAAACAAAATCACAGCACCCACTACCATACAGACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261448.6 |
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