Pregenerated sensors for CASQ1 (Homo sapiens)
Ensembl gene IDs: ENSG00000143318Ensembl transcript IDs: ENST00000368078.8, ENST00000467691.1, ENST00000481081.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTaGTGTCTAGGGAAAAGTAGCTCATTTGCTCATCAAATGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: KLWDKKQKSDKRELA*CLGKSSSFAHQMRG Trigger: CCCCCTCATTTGATGAGCAAATGAGCTACTTTTCCCTAGACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| 3UTR-3UTR TCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGAAAAGACCAGTGGGGCTaGAAGATGGTTGCCATAGCA | + |
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Preference number: 2 (lower is better) Translates to: VSSMAENNLVSLEELREGKDQWG*KMVAIA Trigger: TGCTATGGCAACCATCTTTCAGCCCCACTGGTCTTT...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| 3UTR CCA 72 bp | GATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTaGTGTCTAGGGAAAAGTAGCTCATTTGCTCATCAA | + |
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Preference number: 3 (lower is better) Translates to: DKKQKSDKRELA*CLGKSSSFAHQ Trigger: TTGATGAGCAAATGAGCTACTTTTCCCTAGACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGCCCTGGGTCCCAGATTCTaGGTTAGGGGCTCAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: REWGKAVHRWREQNRDGALGPRF*VRGSSG Trigger: CCCACTTGAGCCCCTAACTCAGAATCTGGGACCCAG...GGCCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGCCGCTTCTTTGCCACCTTaGTGTCGAAGGTGGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: REWGKAVHRWREQNRDGAASLPP*CRRWRR Trigger: TCTTCGCCACCTTCGACAGCAAGGTGGCAAAGAAGC...GGCCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAGTGGACAGAGGGCACTaGTGGGTCCTGGAGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQVDRGH*WVLEKL Trigger: CAGTTTCTCCAGGACCCAGCAGTGCCCTCTGTCCAC...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAGTAGGGAGGGGCCCCTaGGTCCCAGATTCTGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQVGRGP*VPDSEL Trigger: TAACTCAGAATCTGGGACCCAGGGGCCCCTCCCTAC...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAACGTCTTCTCCCAGTATaGGACCAGCAGGGGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQRLLPV*DQQGEV Trigger: GACTTCCCCCTGCTGGTCCCATACTGGGAGAAGACG...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR CCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACGTCTTCTCCCAGTATaGGACCAGCAGGGGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: VSSMAENNLVSLEELREGRLLPV*DQQGEV Trigger: GACTTCCCCCTGCTGGTCCCATACTGGGAGAAGACG...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR TCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAACATCGTCCTCTGTGTTaGTCTCGCCCTCCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQHRPLC*SRPPGH Trigger: ATGTCCTGGAGGGCGAGATCAACACAGAGGACGATG...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR TCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACTTGGGCCACAGCCTTaGGAGTCTCTAAGAACTCGA | + |
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Preference number: 4 (lower is better) Translates to: VSSMAENNLVSLEELREGLGPQP*ESLRTR Trigger: TCGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAG...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGTCCTATTTGTGGGGCTaGCAAGTCGATGTCAAACGT | + |
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Preference number: 4 (lower is better) Translates to: RESGGKLCIDGGNRTEMGSYLWG*QVDVKR Trigger: ACGTTTGACATCGACTTGTCAGCCCCACAAATAGGA...CCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGCCATGAAACTCCTCAGCTaGATCCTCGAAGGCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: REWGKAVHRWREQNRDGAMKLLS*ILEGFV Trigger: TACAAAGCCTTCGAGGATGCAGCTGAGGAGTTTCAT...GGCCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAGGGTCAGCTTCTTTaGCACCTTGCTGTCGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VSSMAENNLVSLEELREGQGQLL*HLAVEG Trigger: ACCTTCGACAGCAAGGTGGCAAAGAAGCTGACCCTG...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCGGCACTGCTGGGTCCTaGAGAAACTGCCGACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VSYGIRNRSQIRESWPGVGTAGS*RNCRQS Trigger: GCTCTGTCGGCAGTTTCTCCAGGACCCAGCAGTGCC...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | CAAGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTCCAGAAGAGGTTAGCTaGGGTAGGGAGGGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QVSYGIRNRSQIRESWPGPEEVS*GREGPL Trigger: CAGGGGCCCCTCCCTACCCCAGCTAACCTCTTCTGG...ACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGCCGGAACAGAACAGAGATaGGGCCCATATATATGGCTA | + |
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Preference number: 4 (lower is better) Translates to: REWGKAVHRWREQNRDGAGTEQR*GPYIWL Trigger: TAGCCATATATATGGGCCCCATCTCTGTTCTGTTCC...GGCCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | GTGTCTCAGCACCCAGCATATAGACCCCAGTTAGCTCTATGGCAGAGAATAACCAGTGGGGGAAAGCTGTaGATAGATGGAGGGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: VSQHPAYRPQLALWQRITSGGKL*IDGGNR Trigger: TCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACT...GGTTATTCTCTGCCATAGAGCTAACTGGGGTCTATATGCTGGGTGCTGAGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAGCAGAAACTCCACGATaGTGTCAGCAGAAAACTCGC | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQAETPR*CQQKTR Trigger: GCGAGTTTTCTGCTGACACCATCGTGGAGTTTCTGC...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGTGGGGCCCATATATATaGCTAGAGGAGAATCACAAG | + |
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Preference number: 4 (lower is better) Translates to: RESGGKLCIDGGNRTEMGWGPYI*LEENHK Trigger: CTTGTGATTCTCCTCTAGCCATATATATGGGCCCCA...CCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | GTGTCTCAGCACCCAGCATATAGACCCCAGTTAGCTCTATGGCAGAGAATAACCATTCTCCCTTCCTTCTaGCCAAGGACAGGACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VSQHPAYRPQLALWQRITILPSF*PRTGQS Trigger: TGACTGTCCTGTCCTTGGCCAGAAGGAAGGGAGAAT...GGTTATTCTCTGCCATAGAGCTAACTGGGGTCTATATGCTGGGTGCTGAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGATCACAGGCTCTTCCATaGAGGCCTCGTAGAAATCAA | + |
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Preference number: 4 (lower is better) Translates to: VSSMAENNLVSLEELREGSQALP*RPRRNQ Trigger: TTGATTTCTACGAGGCCTTCATGGAAGAGCCTGTGA...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGATCCTATTTGTGGGGCTaGCAAGTCGATGTCAAACGT | + |
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Preference number: 4 (lower is better) Translates to: VSSMAENNLVSLEELREGSYLWG*QVDVKR Trigger: ACGTTTGACATCGACTTGTCAGCCCCACAAATAGGA...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR TCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGATATCATCCTCCTTGTTaGTCGGGCTGGTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: VSSMAENNLVSLEELREGYHPPC*SGWSQT Trigger: AGTTTGAGACCAGCCCGATCAACAAGGAGGATGATA...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467691.1 |
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| CDS-3UTR CCA 90 bp | CAAGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGGAGGTAGTGGGATCTaGGTTGGCTCTCCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QVSYGIRNRSQIRESWPGGGSGI*VGSPGP Trigger: TGGACCAGGAGAGCCAACCCAGATCCCACTACCTCC...ACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | CAAGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTCCTGTACCCCTGACTTaGGTGTCCCTAGCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QVSYGIRNRSQIRESWPGPVPLT*VSLAPA Trigger: TGCTGGTGCTAGGGACACCCAAGTCAGGGGTACAGG...ACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAATTGTCTTCTAGGACTTaGGCTGCTAACTCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQLSSRT*AANSRI Trigger: GATCCTGGAGTTAGCAGCCCAAGTCCTAGAAGACAA...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGATTAGGCCTAGTTTCTTaGCCACAGCTGCATCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VSSMAENNLVSLEELREGLGLVS*PQLHPS Trigger: AGAAGGATGCAGCTGTGGCCAAGAAACTAGGCCTAA...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGGCACCTCATACTTCTTaGACACATTCTTGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RESGGKLCIDGGNRTEMGAPHTS*THSCSS Trigger: AGAACTACAAGAATGTGTTCAAGAAGTATGAGGTGC...CCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | CAAGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTCATCGTCCTCTGTGTTaGTCTCGCCCTCCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: QVSYGIRNRSQIRESWPGHRPLC*SRPPGH Trigger: ATGTCCTGGAGGGCGAGATCAACACAGAGGACGATG...ACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | AGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGCCAAAGAGTATGGAGAGTaGTGGAAGAGACACATAATA | + |
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Preference number: 4 (lower is better) Translates to: REWGKAVHRWREQNRDGAKEYGE*WKRHII Trigger: TATTATGTGTCTCTTCCATCACTCTCCATACTCTTT...GGCCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCCTTGCTGTCGAAGGTaGCGAAGAAGGGGATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCPCCRR*RRRGCR Trigger: CCTACATCCCCTTCTTCGCCACCTTCGACAGCAAGG...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAATTTTCAGTGTTATCTTaGGCCACAGCCTTGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQFSVLS*ATALRV Trigger: GACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAA...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR CCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTGCTATTGGGCTTGTCTaGGATGGTCACAGGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCAIGLV*DGHRLF Trigger: GAAGAGCCTGTGACCATCCCAGACAAGCCCAATAGC...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAAAAGCTGTGCATAGATaGAGGGAACAGAACAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQKAVHR*REQNRD Trigger: ATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTT...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCTCAAATTGTCTTTGTaGGGCCTTGTCATCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCLKLSL*GLVILG Trigger: CCCGAGGATGACAAGGCCTCACAAAGACAATTTGAG...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTGCTCCTCCACGAAGTTaGCAATCTCCTCTTCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCAPPRS*QSPLRY Trigger: ATAGCGAAGAGGAGATTGTCAACTTCGTGGAGGAGC...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCCCCAGATGTCTTTATTaGGGCCTCTCATTTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: VSYGIRNRSQIRESWPGVPRCLY*GLSFDP Trigger: TGGGTCAAATGAGAGGCCTCAATAAAGACATCTGGG...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTAGGGTTGATCTCCTGTaGTCCTCCACGAAGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCRVDLL*SSTKLT Trigger: TGTCAACTTCGTGGAGGAGCACAGGAGATCAACCCT...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTTCTCCTCTTCGCTATTaGGCTTGTCTGGGATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCSPLRY*ACLGWS Trigger: TGACCATCCCAGACAAGCCCAATAGCGAAGAGGAGA...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAAAATACATTAACAAGTaGTTGCTGAGATACAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQKYINK*LLRYSP Trigger: GGGACTGTATCTCAGCAATCACTTGTTAATGTATTT...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCATATTCTCAAACGCCTaGAGCTCTCGTTCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VSYGIRNRSQIRESWPGVIFSNA*SSRSPS Trigger: TGAAGGTGAACGAGAGCTGCAGGCGTTTGAGAATAT...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | GTGTCTCAGCACCCAGCATATAGACCCCAGTTAGCTCTATGGCAGAGAATAACCGATGATGCTAAGATCTaGGTTTTCAGTGTTATCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSQHPAYRPQLALWQRITDDAKI*VFSVIL Trigger: CAAGATAACACTGAAAACCCAGATCTTAGCATCATC...GGTTATTCTCTGCCATAGAGCTAACTGGGGTCTATATGCTGGGTGCTGAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAGATGATGCTAAGATCTaGGTTTTCAGTGTTATCTTG | + |
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Preference number: 4 (lower is better) Translates to: SSMAENNLVSLEELREGQDDAKI*VFSVIL Trigger: CAAGATAACACTGAAAACCCAGATCTTAGCATCATC...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR TCA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCGGCTTTGTAATGCTCTaGGTCTTTGCTCTTGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: VSYGIRNRSQIRESWPGVGFVML*VFALEV Trigger: TACTTCAAGAGCAAAGACTCAGAGCATTACAAAGCC...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR GCA 90 bp | CAAGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTTTCATGGTAGAGGAGTaGCAGCACCTCATACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QVSYGIRNRSQIRESWPGFMVEE*QHLILL Trigger: AAGAAGTATGAGGTGCTGGCACTCCTCTACCATGAA...ACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTTTTTCAGTGTTATCTTaGGCCACAGCCTTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCFSVLS*ATALRV Trigger: GACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAA...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR TCA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTTTAACAAGTGATTGCTaGGATACAGTCCCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SKLWDKKQKSDKRELAWCLTSDC*DTVPNT Trigger: TGTGTTTGGGACTGTATCTCAGCAATCACTTGTTAA...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGCCTCATCGTCCTCTGTGTaGATCTCGCCCTCCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: REWGKAVHRWREQNRDGASSSSV*ISPSRT Trigger: TGTCCTGGAGGGCGAGATCAACACAGAGGACGATGA...GGCCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGTCAGTTTCCTCAGGGTaGATCTCCTGTGCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RESGGKLCIDGGNRTEMGSVSSG*ISCAPP Trigger: TGGAGGAGCACAGGAGATCAACCCTGAGGAAACTGA...CCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCCCCTGTACCCCTGACTaGGGTGTCCCTAGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSYGIRNRSQIRESWPGVPCTPD*GVPSTS Trigger: GCTGGTGCTAGGGACACCCAAGTCAGGGGTACAGGG...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGATCATCGTCCTCTGTGTaGATCTCGCCCTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VSSMAENNLVSLEELREGSSSSV*ISPSRT Trigger: TGTCCTGGAGGGCGAGATCAACACAGAGGACGATGA...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS TCA 90 bp | CCTCTTCGCTATTGGGCTTGTCTGGGATGGTCACAGGCTCTTCCATaGAGGCCTCGTAGAAATCAATCTCATTCAGCTTCAGGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLRYWACLGWSQALP*RPRRNQSHSASGSA Trigger: AGCTGACCCTGAAGCTGAATGAGATTGATTTCTACGAGGCCTTCATGGAAGAGCCTGTGACCATCCCAGACAAGCCCAATAGCGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS-3UTR CAA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAGTTAGGCCTAGTTTCTaGGCCACAGCTGCATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSMAENNLVSLEELREGQVRPSF*ATAASF Trigger: GAAGGATGCAGCTGTGGCCAAGAAACTAGGCCTAAC...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | GTGTCTCAGCACCCAGCATATAGACCCCAGTTAGCTCTATGGCAGAGAATAACCTCTTGGGCCACAGCCTaGAGAGTCTCTAAGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: VSQHPAYRPQLALWQRITSWATA*RVSKNS Trigger: CGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAGA...GGTTATTCTCTGCCATAGAGCTAACTGGGGTCTATATGCTGGGTGCTGAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGATCTTGGGCCACAGCCTaGAGAGTCTCTAAGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: VSSMAENNLVSLEELREGSWATA*RVSKNS Trigger: CGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAGA...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS TCA 90 bp | TACGCTATCCGCATCAGTAACATTGACGACTCCTATTTGTGGGGCTaGCAAGTCGATGTCAAACGTCTTCTCCCAGTATGGGACCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YAIRISNIDDSYLWG*QVDVKRLLPVWDQQ Trigger: CTGCTGGTCCCATACTGGGAGAAGACGTTTGACATCGACTTGTCAGCCCCACAAATAGGAGTCGTCAATGTTACTGATGCGGATAGCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS CCA 90 bp | CTCCTCCACGAAGTTGACAATCTCCTCTTCGCTATTGGGCTTGTCTaGGATGGTCACAGGCTCTTCCATGAAGGCCTCGTAGAAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLHEVDNLLFAIGLV*DGHRLFHEGLVEIN Trigger: ATTGATTTCTACGAGGCCTTCATGGAAGAGCCTGTGACCATCCCAGACAAGCCCAATAGCGAAGAGGAGATTGTCAACTTCGTGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS-3UTR CAA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAATGCTCCTCCACGAAGTaGACAATCTCCTCTTCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSMAENNLVSLEELREGQCSSTK*TISSSL Trigger: TAGCGAAGAGGAGATTGTCAACTTCGTGGAGGAGCA...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTGTAGTGGGATCTGGGTaGGCTCTCCTGGTCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKLWDKKQKSDKRELAWCVVGSG*ALLVQK Trigger: CTTCTGGACCAGGAGAGCCAACCCAGATCCCACTAC...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGTGGGGGAAAGCTGTGCATAGATGGAGGGAACAGAACAGAGATGGGGATGACTTCATCTCCCTaGAATACATACATGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RESGGKLCIDGGNRTEMGMTSSP*NTYMLS Trigger: GGACAGCATGTATGTATTCAAGGGAGATGAAGTCAT...CCCCATCTCTGTTCTGTTCCCTCCATCTATGCACAGCTTTCCCCCACTCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCAGCTTCTTTGCCACCTaGCTGTCGAAGGTGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSYGIRNRSQIRESWPGVSFFAT*LSKVAK Trigger: CTTCGCCACCTTCGACAGCAAGGTGGCAAAGAAGCT...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCTCTTCGCTATTGGGCTaGTCTGGGATGGTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSYGIRNRSQIRESWPGVSSLLG*SGMVTG Trigger: GCCTGTGACCATCCCAGACAAGCCCAATAGCGAAGA...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAAGTTTTCAGTGTTATCTaGGGCCACAGCCTTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSMAENNLVSLEELREGQVFSVI*GHSLES Trigger: ACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAAC...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR CAA 90 bp | AGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGACAATCCGCATCAGTAACATaGACGACTCCTATTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSMAENNLVSLEELREGQSASVT*TTPICG Trigger: CCCACAAATAGGAGTCGTCAATGTTACTGATGCGGA...TTGTCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR CAA 90 bp | GTTAGCTCTATGGCAGAGAATAACCTAGTCTCCCTGGAGGAACTCAGGGAAGGATCCGCATCAGTAACATaGACGACTCCTATTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSMAENNLVSLEELREGSASVT*TTPICG Trigger: CCCACAAATAGGAGTCGTCAATGTTACTGATGCGGA...TCCTTCCCTGAGTTCCTCCAGGGAGACTAGGTTATTCTCTGCCATAGAGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS-3UTR CAA 90 bp | GTGTCTCAGCACCCAGCATATAGACCCCAGTTAGCTCTATGGCAGAGAATAACCTTCTTTGCATTGACATaGATCACACGGTCCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: VSQHPAYRPQLALWQRITFFALT*ITRSTP Trigger: TGGTGTGGACCGTGTGATCAATGTCAATGCAAAGAA...GGTTATTCTCTGCCATAGAGCTAACTGGGGTCTATATGCTGGGTGCTGAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | CAAGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTCCGAAGCCAACACCCTaGTCTTCTAGGACTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QVSYGIRNRSQIRESWPGPKPTP*SSRTWA Trigger: AGCCCAAGTCCTAGAAGACAAGGGTGTTGGCTTCGG...ACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | AGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTTCAGGGTCAGCTTCTTaGCCACCTTGCTGTCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLWDKKQKSDKRELAWCSGSAS*PPCCRR Trigger: CCTTCGACAGCAAGGTGGCAAAGAAGCTGACCCTGA...ACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | GTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTCATCTCCTCTTCGCTATaGGGCTTGTCTGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSYGIRNRSQIRESWPGVISSSL*GLSGMV Trigger: GACCATCCCAGACAAGCCCAATAGCGAAGAGGAGAT...GACACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS CCA 90 bp | GGGTCAATCCAGATGATGCTAAGATCTGGGTTTTCAGTGTTATCTTaGGCCACAGCCTTGAGAGTCTCTAAGAACTCGAAACCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSIQMMLRSGFSVLS*ATALRVSKNSKPSG Trigger: TCCTGATGGTTTCGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAACCCAGATCTTAGCATCATCTGGATTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368078.8 ENST00000467691.1 ENST00000481081.1 |
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| CDS GCA 90 bp | GAGTGCCAGCACCTCATACTTCTTGAACACATTCTTGTAGTTCTTTaGATTGACATTGATCACACGGTCCACACCATCGTACTCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ECQHLILLEHILVVL*IDIDHTVHTIVLRE Trigger: TTCCCTGAGTACGATGGTGTGGACCGTGTGATCAATGTCAATGCAAAGAACTACAAGAATGTGTTCAAGAAGTATGAGGTGCTGGCACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS-3UTR CAA 90 bp | CAAGTAAGTTATGGGATAAGAAACAGAAGTCAGATAAGAGAGAGCTGGCCTGGTGTTTTCAGTGTTATCTaGGGCCACAGCCTTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QVSYGIRNRSQIRESWPGVFSVI*GHSLES Trigger: ACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAAC...ACCAGGCCAGCTCTCTCTTATCTGACTTCTGTTTCTTATCCCATAACTTACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS CAA 90 bp | ACAGCTGCATCCTTCTCAGAGTCTACCAGCCCGAAGCCAACACCCTaGTCTTCTAGGACTTGGGCTGCTAACTCCAGGATCAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAASFSESTSPKPTP*SSRTWAANSRISSS Trigger: GGAGGAGCTGATCCTGGAGTTAGCAGCCCAAGTCCTAGAAGACAAGGGTGTTGGCTTCGGGCTGGTAGACTCTGAGAAGGATGCAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS CCA 72 bp | CATCCTGTCTGTAGCACTCATGGAGGTAGTGGGATCTaGGTTGGCTCTCCTGGTCCAGAAGAGGTTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HPVCSTHGGSGI*VGSPGPEEVSW Trigger: CCAGCTAACCTCTTCTGGACCAGGAGAGCCAACCCAGATCCCACTACCTCCATGAGTGCTACAGACAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS CAA 90 bp | GATCTCCTGTGCTCCTCCACGAAGTTGACAATCTCCTCTTCGCTATaGGGCTTGTCTGGGATGGTCACAGGCTCTTCCATGAAGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: DLLCSSTKLTISSSL*GLSGMVTGSSMKAS Trigger: CGAGGCCTTCATGGAAGAGCCTGTGACCATCCCAGACAAGCCCAATAGCGAAGAGGAGATTGTCAACTTCGTGGAGGAGCACAGGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS CAA 72 bp | TCCTTCTCAGAGTCTACCAGCCCGAAGCCAACACCCTaGTCTTCTAGGACTTGGGCTGCTAACTCCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SFSESTSPKPTP*SSRTWAANSRI Trigger: GATCCTGGAGTTAGCAGCCCAAGTCCTAGAAGACAAGGGTGTTGGCTTCGGGCTGGTAGACTCTGAGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368078.8 |
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| CDS CAA 72 bp | TCCTTCTCAGAGTCTACCAGCCCGAAGCCAACACCCTaGTCTTCTAGGACTTGGGCTGCTAACTGGAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SFSESTSPKPTP*SSRTWAANWRE Trigger: TTCCCTCCAGTTAGCAGCCCAAGTCCTAGAAGACAAGGGTGTTGGCTTCGGGCTGGTAGACTCTGAGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481081.1 |
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| CDS TCA 72 bp | TCCTCAGGGTTGATCTCCTGTGCTCCTCCACGAAGTTaGCAATCTCCTCTTCGCTATTGGGCTTGTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSGLISCAPPRS*QSPLRYWACLG Trigger: TCCCAGACAAGCCCAATAGCGAAGAGGAGATTGTCAACTTCGTGGAGGAGCACAGGAGATCAACCCTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS CAA 72 bp | TCCACGAAGTTGACAATCTCCTCTTCGCTATTGGGCTaGTCTGGGATGGTCACAGGCTCTTCCATGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: STKLTISSSLLG*SGMVTGSSMKA Trigger: GGCCTTCATGGAAGAGCCTGTGACCATCCCAGACAAGCCCAATAGCGAAGAGGAGATTGTCAACTTCGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS CAA 72 bp | TGCTCCTCCACGAAGTTGACAATCTCCTCTTCGCTATaGGGCTTGTCTGGGATGGTCACAGGCTCTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CSSTKLTISSSL*GLSGMVTGSSM Trigger: CATGGAAGAGCCTGTGACCATCCCAGACAAGCCCAATAGCGAAGAGGAGATTGTCAACTTCGTGGAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS CAA 72 bp | TTCCTCAGGGTTGATCTCCTGTGCTCCTCCACGAAGTaGACAATCTCCTCTTCGCTATTGGGCTTGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLRVDLLCSSTK*TISSSLLGLSG Trigger: CCCAGACAAGCCCAATAGCGAAGAGGAGATTGTCAACTTCGTGGAGGAGCACAGGAGATCAACCCTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS CCA 72 bp | GAAGTTGACAATCTCCTCTTCGCTATTGGGCTTGTCTaGGATGGTCACAGGCTCTTCCATGAAGGCCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: EVDNLLFAIGLV*DGHRLFHEGLV Trigger: TACGAGGCCTTCATGGAAGAGCCTGTGACCATCCCAGACAAGCCCAATAGCGAAGAGGAGATTGTCAACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS TCA 72 bp | CGCATCAGTAACATTGACGACTCCTATTTGTGGGGCTaGCAAGTCGATGTCAAACGTCTTCTCCCAGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: RISNIDDSYLWG*QVDVKRLLPVW Trigger: CCATACTGGGAGAAGACGTTTGACATCGACTTGTCAGCCCCACAAATAGGAGTCGTCAATGTTACTGATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000467691.1 |
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| CDS TCA 72 bp | TATTGGGCTTGTCTGGGATGGTCACAGGCTCTTCCATaGAGGCCTCGTAGAAATCAATCTCATTCAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YWACLGWSQALP*RPRRNQSHSAS Trigger: TGAAGCTGAATGAGATTGATTTCTACGAGGCCTTCATGGAAGAGCCTGTGACCATCCCAGACAAGCCCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS TCA 72 bp | GATCTGGGTTTTCAGTGTTATCTTGGGCCACAGCCTTaGGAGTCTCTAAGAACTCGAAACCATCAGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLGFQCYLGPQP*ESLRTRNHQDQ Trigger: CTGATCCTGATGGTTTCGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAACCCAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368078.8 ENST00000467691.1 ENST00000481081.1 |
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| CDS CCA 72 bp | GAAGTCATCAGGGTCAATCCAGATGATGCTAAGATCTaGGTTTTCAGTGTTATCTTGGGCCACAGCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVIRVNPDDAKI*VFSVILGHSLE Trigger: CTCAAGGCTGTGGCCCAAGATAACACTGAAAACCCAGATCTTAGCATCATCTGGATTGACCCTGATGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368078.8 ENST00000467691.1 ENST00000481081.1 |
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| CDS CAA 90 bp | ATGATGCTAAGATCTGGGTTTTCAGTGTTATCTTGGGCCACAGCCTaGAGAGTCTCTAAGAACTCGAAACCATCAGGATCAGCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MMLRSGFSVLSWATA*RVSKNSKPSGSASS Trigger: AGAGGAAGCTGATCCTGATGGTTTCGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAACCCAGATCTTAGCATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368078.8 ENST00000467691.1 ENST00000481081.1 |
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| CDS CAA 72 bp | AGATCTGGGTTTTCAGTGTTATCTTGGGCCACAGCCTaGAGAGTCTCTAAGAACTCGAAACCATCAGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: RSGFSVLSWATA*RVSKNSKPSGS Trigger: TGATCCTGATGGTTTCGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAACCCAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368078.8 ENST00000467691.1 ENST00000481081.1 |
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| CDS CAA 90 bp | GTGTCAGCAGAAAACTCGCCATCGTACTCAATGACTTCATCTCCCTaGAATACATACATGCTGTCCACTTCAGTTAGGCCTAGTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSAENSPSYSMTSSP*NTYMLSTSVRPSFL Trigger: CAAGAAACTAGGCCTAACTGAAGTGGACAGCATGTATGTATTCAAGGGAGATGAAGTCATTGAGTACGATGGCGAGTTTTCTGCTGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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| CDS CCA 72 bp | CAGATGATGCTAAGATCTGGGTTTTCAGTGTTATCTTaGGCCACAGCCTTGAGAGTCTCTAAGAACTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QMMLRSGFSVLS*ATALRVSKNSK Trigger: TTTCGAGTTCTTAGAGACTCTCAAGGCTGTGGCCCAAGATAACACTGAAAACCCAGATCTTAGCATCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368078.8 ENST00000467691.1 ENST00000481081.1 |
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| CDS CAA 72 bp | GAAAACTCGCCATCGTACTCAATGACTTCATCTCCCTaGAATACATACATGCTGTCCACTTCAGTTAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ENSPSYSMTSSP*NTYMLSTSVRP Trigger: AGGCCTAACTGAAGTGGACAGCATGTATGTATTCAAGGGAGATGAAGTCATTGAGTACGATGGCGAGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368078.8 ENST00000481081.1 |
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