Pregenerated sensors for CASP8AP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000118412Ensembl transcript IDs: ENST00000237177.10, ENST00000419040.6, ENST00000547893.5, ENST00000548224.2, ENST00000551025.4, ENST00000552401.5, ENST00000671703.1, ENST00000671875.1, ENST00000672165.1, ENST00000672842.1, ENST00000673299.3, ENST00000673411.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACGCAGGGTGCAAGCCCTGAAGCTGCACCGGGGGCGGAGGGAACGTaGCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTA | + |
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Preference number: 5 (lower is better) Translates to: TQGASPEAAPGAEGT*LPAARRQARPFPDL Trigger: TAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGCACCCTGCGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS TCA 90 bp | CCAGACCCTCTCGAAGGACCACAGAGGGACGCAGGGTGCAAGCCCTaGAGCTGCACCGGGGGCGGAGGGAACGTGGCTACCTGCGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PDPLEGPQRDAGCKP*SCTGGGGNVATCGQ Trigger: CTGGCCGCAGGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGCACCCTGCGTCCCTCTGTGGTCCTTCGAGAGGGTCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS CCA 90 bp | AGACGTCAGGCGCGGCCCTTCCCCGACCTACTTGGCCGCTCCAGATaGACTCCCTCCGACTCTCTGGTTTCCCAGGGGCAGCCGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: RRQARPFPDLLGRSR*TPSDSLVSQGQPTS Trigger: GGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000237177.10 ENST00000547893.5 ENST00000551025.4 ENST00000671703.1 ENST00000671875.1 ENST00000673299.3 |
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| CDS CCA 90 bp | ACCACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTTaGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TTCGQTSGAALPRPT*PLQMDSLRLSGFPG Trigger: CCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CCA 90 bp | GCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTTaGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ATCGQTSGAALPRPT*PLQMDSLRLSGFPG Trigger: CCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS CCA 90 bp | GAGAGTCACCACTTGGCCGCTCCAGATGGACTCCCTCCGACTCTCTaGTTTCCCAGGGGCAGCCGACCTCCACTCGGGGGACTACCGCGC | + |
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Preference number: 5 (lower is better) Translates to: ESHHLAAPDGLPPTL*FPRGSRPPLGGLPR Trigger: GCGCGGTAGTCCCCCGAGTGGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTGGTGACTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419040.6 ENST00000548224.2 ENST00000672165.1 ENST00000673411.1 |
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| CDS TCA 90 bp | GAGGGCATAGCGGGGATAGGAAGGGAGATGGGAGAATCCCTGCCATaGAAGCCTCTGTCCCCCTCCAGTCAAAGAGGCGCTGAGGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: EGIAGIGREMGESLP*KPLSPSSQRGAEGD Trigger: ATCTCCCTCAGCGCCTCTTTGACTGGAGGGGGACAGAGGCTTTCATGGCAGGGATTCTCCCATCTCCCTTCCTATCCCCGCTATGCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS TCA 90 bp | CATCAAATAAACTTGTTCCATCACCATTGTCATCATCTGCTGCCATaGTCCTATTTCCTTTTGAGAGTCACCACCTGCGGCCAGACGTCA | + |
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Preference number: 5 (lower is better) Translates to: HQINLFHHHCHHLLP*SYFLLRVTTCGQTS Trigger: TGACGTCTGGCCGCAGGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAATGGTGATGGAACAAGTTTATTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | TTGGTTCCAATAACGTTGACTTGGTTTCCCCCATGGTATGTTCACTaGCAGCTGCTTCCCCCAAGATATGTTCACTTATGGAGGGAACAT | + |
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Preference number: 5 (lower is better) Translates to: LVPITLTWFPPWYVH*QLLPPRYVHLWREH Trigger: ATGTTCCCTCCATAAGTGAACATATCTTGGGGGAAGCAGCTGTCAGTGAACATACCATGGGGGAAACCAAGTCAACGTTATTGGAACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | ACCTGTATCACCCCACATCCCAAGTCTTCCACAGCTAATGCAGGATaGTTACCTTCACTTTTAGCCTCACTTGAAGCATCTTGTGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: TCITPHPKSSTANAG*LPSLLASLEASCVK Trigger: TTTGACACAAGATGCTTCAAGTGAGGCTAAAAGTGAAGGTAATCATCCTGCATTAGCTGTGGAAGACTTGGGATGTGGGGTGATACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | TCTTTAGTCACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTTGGTaGGCTTCAGTATTCTCACAAGAATCTTGGGTAGGTTTCTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SLVTGGAFFLLAFFW*ASVFSQESWVGFLV Trigger: GACCAAGAAACCTACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGTGACTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | CATCAAATAAACTTGTTCCATCACCATTGTCATCATCTGCTGCCATaGTCCTATTTCCTTTTGAGAGTCACCACTTGGCCGCTCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: HQINLFHHHCHHLLP*SYFLLRVTTWPLQM Trigger: CATCTGGAGCGGCCAAGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAATGGTGATGGAACAAGTTTATTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419040.6 ENST00000548224.2 ENST00000672165.1 ENST00000673411.1 |
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| CDS CCA 90 bp | TTTTGCTACAGGTCTCACTGGACTATTCAGAGGACTGATGGCTTCTaGAATAGGTCTCAGGTGATTAAGGTCAATGCTCAAAACCGAGTT | + |
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Preference number: 5 (lower is better) Translates to: FCYRSHWTIQRTDGF*NRSQVIKVNAQNRV Trigger: AACTCGGTTTTGAGCATTGACCTTAATCACCTGAGACCTATTCCAGAAGCCATCAGTCCTCTGAATAGTCCAGTGAGACCTGTAGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | TTTGTTTCACCAGTTGCCATTCTGTGGTCCATTAACTCAGTCTGCTaGAGTGAAGAATCTAGAGTCTCTTTAGGTAAGCAAGGCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: FVSPVAILWSINSVC*SEESRVSLGKQGSR Trigger: TCTGGAGCCTTGCTTACCTAAAGAGACTCTAGATTCTTCACTTCAGCAGACTGAGTTAATGGACCACAGAATGGCAACTGGTGAAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | TGCTCAGATGCATCCTCTTCCTCAAGTAAGGCATCTTCACTAAAATaGGCACTAATGACTTCTTCAGGAGTTGAACTGGACGACATATCA | + |
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Preference number: 5 (lower is better) Translates to: CSDASSSSSKASSLK*ALMTSSGVELDDIS Trigger: TGATATGTCGTCCAGTTCAACTCCTGAAGAAGTCATTAGTGCTCATTTTAGTGAAGATGCCTTACTTGAGGAAGAGGATGCATCTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | CATCAAATAAACTTGTTCCATCACCATTGTCATCATCTGCTGCCATaGTCCTATTTCCTTTTGAGAGTCACCACCTGTAGTTCCAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: HQINLFHHHCHHLLP*SYFLLRVTTCSSSY Trigger: GTAGCTGGAACTACAGGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAATGGTGATGGAACAAGTTTATTTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS CCA 90 bp | GCAAAATATCAGCTTCCTCAATTGAAGGCTGCAAAATGCTTTCAGTaGTTTCACTCACTGTTGTTGAAAGTGCCACCTTCATCTCCATAC | + |
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Preference number: 5 (lower is better) Translates to: AKYQLPQLKAAKCFQ*FHSLLLKVPPSSPY Trigger: GTATGGAGATGAAGGTGGCACTTTCAACAACAGTGAGTGAAACCACTGAAAGCATTTTGCAGCCTTCAATTGAGGAAGCTGATATTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CCA 90 bp | GAGGCGATGGTACTGTTAAAGAGACTGCTAGATCTTCAAGAAGTATaGAAGAAACGCAGGGCTTGCTCTTTTCTACACTACACACATTAT | + |
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Preference number: 5 (lower is better) Translates to: EAMVLLKRLLDLQEV*KKRRACSFLHYTHY Trigger: ATAATGTGTGTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAGCAGTCTCTTTAACAGTACCATCGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 90 bp | GGAGATGGGAAGGAAGTCTCTGTACCACAAATGGGCTCTTCACAATaGATAGTATTGTCAACAGACCTAACTAACAAACTATTTTCGTCT | + |
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Preference number: 5 (lower is better) Translates to: GDGKEVSVPQMGSSQ*IVLSTDLTNKLFSS Trigger: AGACGAAAATAGTTTGTTAGTTAGGTCTGTTGACAATACTATGCATTGTGAAGAGCCCATTTGTGGTACAGAGACTTCCTTCCCATCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 90 bp | CCCATTTGTGCATCACTCACTAAATTAAAAGTAAGGCTCGATGCTTaGTGTTCGGTAAGAATCTCGAAACTTCGTTCTGGCTTCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: PICASLTKLKVRLDA*CSVRISKLRSGFKV Trigger: AACTTTGAAGCCAGAACGAAGTTTCGAGATTCTTACCGAACAGCAAGCATCGAGCCTTACTTTTAATTTAGTGAGTGATGCACAAATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | ATCAGGAACCTGTGTTTGTATCATAGAGCTCTGTTCTTCATGAGTTaGCTTGCTGCCATCAACATTTTTGTTGGAGTTTTCCAATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: IRNLCLYHRALFFMS*LAAINIFVGVFQFL Trigger: GAGGAATTGGAAAACTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAGGTTCCTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 90 bp | TTCATTTGGACCACTCTCAGCTTTCATTGCAAGCTCTTTATTATCTaGTCCTTCAGAAACACCATTATCAAGGACTTCTCCCTTATCAGT | + |
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Preference number: 5 (lower is better) Translates to: FIWTTLSFHCKLFII*SFRNTIIKDFSLIS Trigger: ACTGATAAGGGAGAAGTCCTTGATAATGGTGTTTCTGAAGGAGCAGATAATAAAGAGCTTGCAATGAAAGCTGAGAGTGGTCCAAATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | GAATCACATACACCACTGGACTTGGGAATATCAGTTATTTTATGCTaGTTATCCTGGGAAACAGGTTGCTTTTTAGCAGGAGAAAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: ESHTPLDLGISVILC*LSWETGCFLAGERV Trigger: AACTCTTTCTCCTGCTAAAAAGCAACCTGTTTCCCAGGATAATCAGCATAAAATAACTGATATTCCCAAGTCCAGTGGTGTATGTGATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | CTTCAATGCTTTCAGGCACTTTTGTTTCCCATACTTGATGCAATTTaGAACATTCATCAGCCACTTCATCACTATGACCCATCTTATCTG | + |
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Preference number: 5 (lower is better) Translates to: LQCFQALLFPILDAI*NIHQPLHHYDPSYL Trigger: CAGATAAGATGGGTCATAGTGATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAAGCATTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 90 bp | AAGAGACTGCTAGATCTTCAAGAAGTATGGAAGAAACGCAGGGCTTaGTCTTTTCTACACTACACACATTATCTTTACTTAAAGGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: KRLLDLQEVWKKRRA*SFLHYTHYLYLKVG Trigger: ACCTACCTTTAAGTAAAGATAATGTGTGTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAGCAGTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | TCTGAATTATCATTTCTTTTGGTATCCAATTCCAAGCCAAAGTTTTaGGACACATCTGTTTGTAATACATCCATTACCACAGGAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SELSFLLVSNSKPKF*DTSVCNTSITTGAA Trigger: AGCAGCTCCTGTGGTAATGGATGTATTACAAACAGATGTGTCTCAAAACTTTGGCTTGGAATTGGATACCAAAAGAAATGATAATTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | TATATATCAGGAACCTGTGTTTGTATCATAGAGCTCTGTTCTTCATaGGTTGACTTGCTGCCATCAACATTTTTGTTGGAGTTTTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: YISGTCVCIIELCSS*VDLLPSTFLLEFSN Trigger: ATTGGAAAACTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAGGTTCCTGATATATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 90 bp | TTTCTCCCAAGAAGAGTTAATGCGTTCACCTTTATAGTCAGAATCTaGGTTACTTTTAAACTTCGAACTTTTGCTTTCAGTCTTTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: FLPRRVNAFTFIVRI*VTFKLRTFAFSLWF Trigger: GAACCAAAGACTGAAAGCAAAAGTTCGAAGTTTAAAAGTAACTCAGATTCTGACTATAAAGGTGAACGCATTAACTCTTCTTGGGAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000237177.10 ENST00000419040.6 ENST00000551025.4 ENST00000552401.5 ENST00000671703.1 ENST00000672165.1 ENST00000672842.1 ENST00000673299.3 |
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| CDS TCA 90 bp | AAGTGCCACCTTCATCTCCATACCTTCAGAAATACCACAATAATCTaGATTATCATTTCTTTTGGTATCCAATTCCAAGCCAAAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: KCHLHLHTFRNTTII*IIISFGIQFQAKVL Trigger: CAAAACTTTGGCTTGGAATTGGATACCAAAAGAAATGATAATTCAGATTATTGTGGTATTTCTGAAGGTATGGAGATGAAGGTGGCACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 90 bp | CAGCCTGCAAAGAATTGTCTAATATTTGAGCACTCTGATTTAAATTaGCTCCAGAACATCCCAACTGATCAATATGTAAAACTGTTACTT | + |
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Preference number: 5 (lower is better) Translates to: QPAKNCLIFEHSDLN*LQNIPTDQYVKLLL Trigger: AAGTAACAGTTTTACATATTGATCAGTTGGGATGTTCTGGAGGCAATTTAAATCAGAGTGCTCAAATATTAGACAATTCTTTGCAGGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CCA 72 bp | GCAAGCCCTGAAGCTGCACCGGGGGCGGAGGGAACGTaGCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASPEAAPGAEGT*LPAARRQARPF Trigger: GAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS CCA 72 bp | GGGAGGGGCAGGACGAGAGGCCGAAGGGACAATTCCTaGGCGCGCCCACCCATAGTCCCCGCCCAGACCCTC | + |
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Preference number: 6 (lower is better) Translates to: GRGRTRGRRDNS*ARPPIVPAQTL Trigger: GAGGGTCTGGGCGGGGACTATGGGTGGGCGCGCCCAGGAATTGTCCCTTCGGCCTCTCGTCCTGCCCCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS GCA 72 bp | GGGCAGCCGACCTCCACTCGGGGGACTACCGCGCCATaGAGCCTCTTCCTTAGCAGTCCCTCACGGACCGGG | + |
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Preference number: 6 (lower is better) Translates to: GQPTSTRGTTAP*SLFLSSPSRTG Trigger: CCCGGTCCGTGAGGGACTGCTAAGGAAGAGGCTGCATGGCGCGGTAGTCCCCCGAGTGGAGGTCGGCTGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000237177.10 ENST00000419040.6 ENST00000547893.5 ENST00000548224.2 ENST00000551025.4 ENST00000671703.1 ENST00000671875.1 ENST00000672165.1 ENST00000673299.3 ENST00000673411.1 |
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| CDS CAA 72 bp | CGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTaGGCCGCTCCAGATGGACTCCCTCCGACTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RPDVRRGPSPTY*AAPDGLPPTLW Trigger: CCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000237177.10 ENST00000547893.5 ENST00000551025.4 ENST00000671703.1 ENST00000671875.1 ENST00000673299.3 |
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| CDS CAA 90 bp | CACCACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTaGGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: HHLRPDVRRGPSPTY*AAPDGLPPTLWFPR Trigger: CCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 90 bp | GGCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTaGGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GYLRPDVRRGPSPTY*AAPDGLPPTLWFPR Trigger: CCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS TCA 72 bp | CTCGAAGGACCACAGAGGGACGCAGGGTGCAAGCCCTaGAGCTGCACCGGGGGCGGAGGGAACGTGGCTACC | + |
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Preference number: 6 (lower is better) Translates to: LEGPQRDAGCKP*SCTGGGGNVAT Trigger: GGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGCACCCTGCGTCCCTCTGTGGTCCTTCGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS CCA 72 bp | GCGCGGCCCTTCCCCGACCTACTTGGCCGCTCCAGATaGACTCCCTCCGACTCTCTGGTTTCCCAGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ARPFPDLLGRSR*TPSDSLVSQGQ Trigger: CTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000237177.10 ENST00000547893.5 ENST00000551025.4 ENST00000671703.1 ENST00000671875.1 ENST00000673299.3 |
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| CDS CCA 72 bp | GGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTTaGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GQTSGAALPRPT*PLQMDSLRLSG Trigger: ACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000237177.10 ENST00000547893.5 ENST00000551025.4 ENST00000671703.1 ENST00000671875.1 ENST00000673299.3 |
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| CDS CCA 72 bp | CACTTGGCCGCTCCAGATGGACTCCCTCCGACTCTCTaGTTTCCCAGGGGCAGCCGACCTCCACTCGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: HLAAPDGLPPTL*FPRGSRPPLGG Trigger: TCCCCCGAGTGGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419040.6 ENST00000548224.2 ENST00000672165.1 ENST00000673411.1 |
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| CDS CCA 72 bp | TACTTGGCCGCTCCAGATGGACTCCCTCCGACTCTCTaGTTTCCCAGGGGCAGCCGACCTCCACTCGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: YLAAPDGLPPTL*FPRGSRPPLGG Trigger: TCCCCCGAGTGGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000237177.10 ENST00000547893.5 ENST00000551025.4 ENST00000671703.1 ENST00000671875.1 ENST00000673299.3 |
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| CDS TCA 72 bp | GCGGGGATAGGAAGGGAGATGGGAGAATCCCTGCCATaGAAGCCTCTGTCCCCCTCCAGTCAAAGAGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGIGREMGESLP*KPLSPSSQRGA Trigger: AGCGCCTCTTTGACTGGAGGGGGACAGAGGCTTTCATGGCAGGGATTCTCCCATCTCCCTTCCTATCCCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
||
| CDS CCA 72 bp | GGGAAAGGCCTTGAGGAGAGGCGAAAGGTTTGCTGCTaGAGGTGTGGAGAATGGAAAAAGACCAAGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GKGLEERRKVCC*RCGEWKKTKEE Trigger: CTCTTCCTTGGTCTTTTTCCATTCTCCACACCTCCAGCAGCAAACCTTTCGCCTCTCCTCAAGGCCTTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
||
| CDS GCA 72 bp | AGCACAGGAGGTCAAACCTGTAGTAAGCCGAGATCTTaGCATTGCACTCCAGCCTGGGCTATAGTCTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: STGGQTCSKPRS*HCTPAWAIVSK Trigger: TTTTGAGACTATAGCCCAGGCTGGAGTGCAATGGCAAGATCTCGGCTTACTACAGGTTTGACCTCCTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
||
| CDS CAA 72 bp | CGATCCTGGGTTCAGTCACTGCTAGAAGAGCAACCTTaGGTTCCAATAACGTTGACTTGGTTTCCCCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: RSWVQSLLEEQP*VPITLTWFPPW Trigger: CCATGGGGGAAACCAAGTCAACGTTATTGGAACCAAAGGTTGCTCTTCTAGCAGTGACTGAACCCAGGATCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CCA 72 bp | ATCTCGAAACTTCGTTCTGGCTTCAAAGTTGCATGCTaGGATGTCTGTGCATCCTCTATGCTGCTTCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ISKLRSGFKVAC*DVCASSMLLPS Trigger: CGAAGGAAGCAGCATAGAGGATGCACAGACATCCCAGCATGCAACTTTGAAGCCAGAACGAAGTTTCGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 90 bp | CTGAGATACCGATCCTGGGTTCAGTCACTGCTAGAAGAGCAACCTTaGGTTCCAATAACGTTGACTTGGTTTCCCCCATGGTATGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRYRSWVQSLLEEQP*VPITLTWFPPWYVH Trigger: GTGAACATACCATGGGGGAAACCAAGTCAACGTTATTGGAACCAAAGGTTGCTCTTCTAGCAGTGACTGAACCCAGGATCGGTATCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 72 bp | AGAATCTCGAAACTTCGTTCTGGCTTCAAAGTTGCATaGTGGGATGTCTGTGCATCCTCTATGCTGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RISKLRSGFKVA*WDVCASSMLLP Trigger: AGGAAGCAGCATAGAGGATGCACAGACATCCCAGCATGCAACTTTGAAGCCAGAACGAAGTTTCGAGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
||
| CDS CAA 72 bp | GCTAGAAGAGCAACCTTTGGTTCCAATAACGTTGACTaGGTTTCCCCCATGGTATGTTCACTGACAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARRATFGSNNVD*VSPMVCSLTAA Trigger: AGCAGCTGTCAGTGAACATACCATGGGGGAAACCAAGTCAACGTTATTGGAACCAAAGGTTGCTCTTCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
||
| CDS TCA 72 bp | ATAACGTTGACTTGGTTTCCCCCATGGTATGTTCACTaGCAGCTGCTTCCCCCAAGATATGTTCACTTATGG | + |
|
Preference number: 6 (lower is better) Translates to: ITLTWFPPWYVH*QLLPPRYVHLW Trigger: CCATAAGTGAACATATCTTGGGGGAAGCAGCTGTCAGTGAACATACCATGGGGGAAACCAAGTCAACGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | ACCCCACATCCCAAGTCTTCCACAGCTAATGCAGGATaGTTACCTTCACTTTTAGCCTCACTTGAAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TPHPKSSTANAG*LPSLLASLEAS Trigger: AGATGCTTCAAGTGAGGCTAAAAGTGAAGGTAATCATCCTGCATTAGCTGTGGAAGACTTGGGATGTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | ACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTTGGTaGGCTTCAGTATTCTCACAAGAATCTTGGGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGGAFFLLAFFW*ASVFSQESWVG Trigger: ACCTACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
||
| CDS GCA 72 bp | GCTGGTATAGACTCGCACTTAAGAGTCTCTAGCAGCTaGTTCTCTGGAGTCTTTAACTCCCACTCACTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AGIDSHLRVSSS*FSGVFNSHSLF Trigger: AAAAAGTGAGTGGGAGTTAAAGACTCCAGAGAAGCAGCTGCTAGAGACTCTTAAGTGCGAGTCTATACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
||
| CDS CCA 72 bp | AGGTCTCACTGGACTATTCAGAGGACTGATGGCTTCTaGAATAGGTCTCAGGTGATTAAGGTCAATGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSHWTIQRTDGF*NRSQVIKVNAQ Trigger: TTGAGCATTGACCTTAATCACCTGAGACCTATTCCAGAAGCCATCAGTCCTCTGAATAGTCCAGTGAGACCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 72 bp | AGTCACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTaGGTGAGCTTCAGTATTCTCACAAGAATCTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SHRRGLLLTGFL*VSFSILTRILG Trigger: ACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
||
| CDS CAA 90 bp | GGGATCTTTAGTCACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTaGGTGAGCTTCAGTATTCTCACAAGAATCTTGGGTAGGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GIFSHRRGLLLTGFL*VSFSILTRILGRFL Trigger: AAGAAACCTACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGTGACTAAAGATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | AAGGAAGAGTCGAAGAGTCAAAGACAACTTGATGCCTaGAGCACAAATGCTCAGCTCCTACGAATCCTACAT | + |
|
Preference number: 6 (lower is better) Translates to: KEESKSQRQLDA*STNAQLLRILH Trigger: ATGTAGGATTCGTAGGAGCTGAGCATTTGTGCTTCAGGCATCAAGTTGTCTTTGACTCTTCGACTCTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS TCA 72 bp | ATTGTCATCATCTGCTGCCATGATCCTATTTCCTTTTaGGAGTCACCACCTGTAGTTCCAGCTACTTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IVIICCHDPISF*ESPPVVPATWK Trigger: CTTCCAAGTAGCTGGAACTACAGGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547893.5 ENST00000671875.1 |
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| CDS TCA 72 bp | GAATCTAGAGTCTCTTTAGGTAAGCAAGGCTCCAGATaGCACGACTTACTCTCAACCAGTGGTGTAACTATA | + |
|
Preference number: 6 (lower is better) Translates to: ESRVSLGKQGSR*HDLLSTSGVTI Trigger: TATAGTTACACCACTGGTTGAGAGTAAGTCGTGTCATCTGGAGCCTTGCTTACCTAAAGAGACTCTAGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | CCAGTTGCCATTCTGTGGTCCATTAACTCAGTCTGCTaGAGTGAAGAATCTAGAGTCTCTTTAGGTAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PVAILWSINSVC*SEESRVSLGKQ Trigger: TTGCTTACCTAAAGAGACTCTAGATTCTTCACTTCAGCAGACTGAGTTAATGGACCACAGAATGGCAACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | GCATCCTCTTCCTCAAGTAAGGCATCTTCACTAAAATaGGCACTAATGACTTCTTCAGGAGTTGAACTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSSKASSLK*ALMTSSGVELD Trigger: GTCCAGTTCAACTCCTGAAGAAGTCATTAGTGCTCATTTTAGTGAAGATGCCTTACTTGAGGAAGAGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 72 bp | GCATCACTCACTAAATTAAAAGTAAGGCTCGATGCTTaGTGTTCGGTAAGAATCTCGAAACTTCGTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASLTKLKVRLDA*CSVRISKLRSG Trigger: GCCAGAACGAAGTTTCGAGATTCTTACCGAACAGCAAGCATCGAGCCTTACTTTTAATTTAGTGAGTGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CCA 72 bp | GCTTTCATTTCTAAGAACTTTTGCTACAGGTCTCACTaGACTATTCAGAGGACTGATGGCTTCTGGAATAGG | + |
|
Preference number: 6 (lower is better) Translates to: AFISKNFCYRSH*TIQRTDGFWNR Trigger: CCTATTCCAGAAGCCATCAGTCCTCTGAATAGTCCAGTGAGACCTGTAGCAAAAGTTCTTAGAAATGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 72 bp | TATAAGTCCAAACAATTTCTTGATGGTACACAGGATTaGGAAGCGCTGTCAGAAACAGCACTGTCCAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: YKSKQFLDGTQD*EALSETALSNP Trigger: TGGGTTGGACAGTGCTGTTTCTGACAGCGCTTCCAAATCCTGTGTACCATCAAGAAATTGTTTGGACTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000237177.10 ENST00000419040.6 ENST00000547893.5 ENST00000548224.2 ENST00000551025.4 ENST00000552401.5 ENST00000671703.1 ENST00000671875.1 ENST00000672165.1 ENST00000672842.1 ENST00000673299.3 ENST00000673411.1 |
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| CDS TCA 72 bp | GGAACCTGTGTTTGTATCATAGAGCTCTGTTCTTCATaGGTTGACTTGCTGCCATCAACATTTTTGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTCVCIIELCSS*VDLLPSTFLLE Trigger: CTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAGGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 72 bp | ACCACTCTCAGCTTTCATTGCAAGCTCTTTATTATCTaGTCCTTCAGAAACACCATTATCAAGGACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TTLSFHCKLFII*SFRNTIIKDFS Trigger: GGAGAAGTCCTTGATAATGGTGTTTCTGAAGGAGCAGATAATAAAGAGCTTGCAATGAAAGCTGAGAGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CCA 72 bp | GTACTGTTAAAGAGACTGCTAGATCTTCAAGAAGTATaGAAGAAACGCAGGGCTTGCTCTTTTCTACACTAC | + |
|
Preference number: 6 (lower is better) Translates to: VLLKRLLDLQEV*KKRRACSFLHY Trigger: GTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAGCAGTCTCTTTAACAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 72 bp | TCAACAGACCTAACTAACAAACTATTTTCGTCTTCCTaGTTGGTTTCTGAGATACCGATCCTGGGTTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: STDLTNKLFSSS*LVSEIPILGSV Trigger: GACTGAACCCAGGATCGGTATCTCAGAAACCAACAAGGAAGACGAAAATAGTTTGTTAGTTAGGTCTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 90 bp | TTCCTTCTTCAGTCAGGATCTCTTCATATAAGTCCAAACAATTTCTaGATGGTACACAGGATTTGGAAGCGCTGTCAGAAACAGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLLQSGSLHISPNNF*MVHRIWKRCQKQHC Trigger: ACAGTGCTGTTTCTGACAGCGCTTCCAAATCCTGTGTACCATCAAGAAATTGTTTGGACTTATATGAAGAGATCCTGACTGAAGAAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000237177.10 ENST00000419040.6 ENST00000547893.5 ENST00000548224.2 ENST00000551025.4 ENST00000552401.5 ENST00000671703.1 ENST00000671875.1 ENST00000672165.1 ENST00000672842.1 ENST00000673299.3 ENST00000673411.1 |
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| CDS CAA 90 bp | GTATTGTCAACAGACCTAACTAACAAACTATTTTCGTCTTCCTTGTaGGTTTCTGAGATACCGATCCTGGGTTCAGTCACTGCTAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VLSTDLTNKLFSSSL*VSEIPILGSVTARR Trigger: TCTTCTAGCAGTGACTGAACCCAGGATCGGTATCTCAGAAACCAACAAGGAAGACGAAAATAGTTTGTTAGTTAGGTCTGTTGACAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 90 bp | GGTCAATGCTCAAAACCGAGTTATCATCATCATGATATACTGAGTTaGTTTCACCAGTTGCCATTCTGTGGTCCATTAACTCAGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQCSKPSYHHHDILS*FHQLPFCGPLTQSA Trigger: AGCAGACTGAGTTAATGGACCACAGAATGGCAACTGGTGAAACAAACTCAGTATATCATGATGATGATAACTCGGTTTTGAGCATTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 90 bp | GAAAGCCTGGAGCAACAGATCGGCTTGTCCAGGAAGAAGAACAACTaGATTTACTGCTTGAATTATCAGACTCCAGAGCTAAATGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: ESLEQQIGLSRKKNN*IYCLNYQTPELNEY Trigger: ATATTCATTTAGCTCTGGAGTCTGATAATTCAAGCAGTAAATCAAGTTGTTCTTCTTCCTGGACAAGCCGATCTGTTGCTCCAGGCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 90 bp | ATAGTATTGTCAACAGACCTAACTAACAAACTATTTTCGTCTTCCTaGTTGGTTTCTGAGATACCGATCCTGGGTTCAGTCACTGCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IVLSTDLTNKLFSSS*LVSEIPILGSVTAR Trigger: TCTAGCAGTGACTGAACCCAGGATCGGTATCTCAGAAACCAACAAGGAAGACGAAAATAGTTTGTTAGTTAGGTCTGTTGACAATACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 72 bp | ATTCTGTGGTCAAGTCGATATAGGTTTCCTCAACAATaGATTTTAAAGGCCTGTTTGCCACTTGTGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ILWSSRYRFPQQ*ILKACLPLVPF Trigger: AAAAGGCACAAGTGGCAAACAGGCCTTTAAAATGCATTGTTGAGGAAACCTATATCGACTTGACCACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 72 bp | GCTTGGACAGTGTACTTCCAAGGAGCGCTCTTCGGATaGAGAGTTCTTTATATTATCAAAGCAGATGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: AWTVYFQGALFG*RVLYIIKADVK Trigger: TTTAACATCTGCTTTGATAATATAAAGAACTCTCAATCCGAAGAGCGCTCCTTGGAAGTACACTGTCCAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 90 bp | AAACCGAGTTATCATCATCATGATATACTGAGTTTGTTTCACCAGTaGCCATTCTGTGGTCCATTAACTCAGTCTGCTGAAGTGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KPSYHHHDILSLFHQ*PFCGPLTQSAEVKN Trigger: ATTCTTCACTTCAGCAGACTGAGTTAATGGACCACAGAATGGCAACTGGTGAAACAAACTCAGTATATCATGATGATGATAACTCGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | CTTGGACAGTGTACTTCCAAGGAGCGCTCTTCGGATTaGGAGTTCTTTATATTATCAAAGCAGATGTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGQCTSKERSSD*EFFILSKQMLK Trigger: TTTTAACATCTGCTTTGATAATATAAAGAACTCTCAATCCGAAGAGCGCTCCTTGGAAGTACACTGTCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | CTGTGTTTGTATCATAGAGCTCTGTTCTTCATGAGTTaGCTTGCTGCCATCAACATTTTTGTTGGAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCLYHRALFFMS*LAAINIFVGVF Trigger: GAAAACTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | TTTCAGGCACTTTTGTTTCCCATACTTGATGCAATTTaGAACATTCATCAGCCACTTCATCACTATGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: FQALLFPILDAI*NIHQPLHHYDP Trigger: TGGGTCATAGTGATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | TTAAGGTCAATGCTCAAAACCGAGTTATCATCATCATaGTATACTGAGTTTGTTTCACCAGTTGCCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRSMLKTELSSS*YTEFVSPVAIL Trigger: CAGAATGGCAACTGGTGAAACAAACTCAGTATATCATGATGATGATAACTCGGTTTTGAGCATTGACCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | AGCAATTCTCTGTTGGAGTTGTCCACACTCCTTTTCTaGCTATTTGAATACTGTGCATTCTGTTTACTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SNSLLELSTLLF*LFEYCAFCLLV Trigger: AACAAGTAAACAGAATGCACAGTATTCAAATAGTCAGAAAAGGAGTGTGGACAACTCCAACAGAGAATTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS TCA 72 bp | TCTTCAATGCTTTCAGGCACTTTTGTTTCCCATACTTaGTGCAATTTGAAACATTCATCAGCCACTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSMLSGTFVSHT*CNLKHSSATSS Trigger: TGATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAAGCATTGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS GCA 72 bp | CTAGATCTTCAAGAAGTATGGAAGAAACGCAGGGCTTaGTCTTTTCTACACTACACACATTATCTTTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: LDLQEVWKKRRA*SFLHYTHYLYL Trigger: TAAGTAAAGATAATGTGTGTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CAA 72 bp | TTCTTCAATGCTTTCAGGCACTTTTGTTTCCCATACTaGATGCAATTTGAAACATTCATCAGCCACTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: FFNAFRHFCFPY*MQFETFISHFI Trigger: GATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAAGCATTGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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| CDS CCA 72 bp | GTTACTTTTAAACTTCGAACTTTTGCTTTCAGTCTTTaGTTCACCTTTACCATATTTCTCAGGATGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VTFKLRTFAFSL*FTFTIFLRMSL Trigger: CAAGGACATCCTGAGAAATATGGTAAAGGTGAACCAAAGACTGAAAGCAAAAGTTCGAAGTTTAAAAGTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000237177.10 ENST00000419040.6 ENST00000551025.4 ENST00000552401.5 ENST00000671703.1 ENST00000672165.1 ENST00000672842.1 ENST00000673299.3 |
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| CDS CAA 72 bp | CATATTCTACTTGCAAATCATTATATGTTGCCTCCTTaGCAGTTCCTTCTTCAGTCAGGATCTCTTCATATA | + |
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Preference number: 6 (lower is better) Translates to: HILLANHYMLPP*QFLLQSGSLHI Trigger: TATATGAAGAGATCCTGACTGAAGAAGGAACTGCAAAGGAGGCAACATATAATGATTTGCAAGTAGAATATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000237177.10 ENST00000419040.6 ENST00000547893.5 ENST00000548224.2 ENST00000551025.4 ENST00000552401.5 ENST00000671703.1 ENST00000671875.1 ENST00000672165.1 ENST00000672842.1 ENST00000673299.3 ENST00000673411.1 |
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| CDS CAA 72 bp | TCAAGTTTGCCTTCATCACTATCTCTTCCAAAGCTTTaGGAATCACATACTAAGATTTTCTTAAGCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLPSSLSLPKL*ESHTKIFLSFA Trigger: TGCAAAGCTTAAGAAAATCTTAGTATGTGATTCCAAAAGCTTTGGAAGAGATAGTGATGAAGGCAAACTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000237177.10 ENST00000551025.4 ENST00000671703.1 ENST00000673299.3 |
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