RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASP8AP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000118412

Ensembl transcript IDs: ENST00000237177.10, ENST00000419040.6, ENST00000547893.5, ENST00000548224.2, ENST00000551025.4, ENST00000552401.5, ENST00000671703.1, ENST00000671875.1, ENST00000672165.1, ENST00000672842.1, ENST00000673299.3, ENST00000673411.1

Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ACGCAGGGTGCAAGCCCTGAAGCTGCACCGGGGGCGGAGGGAACGTaGCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTA +
Preference number: 5 (lower is better)
Translates to: TQGASPEAAPGAEGT*LPAARRQARPFPDL
Trigger: TAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGCACCCTGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS TCA 90 bp CCAGACCCTCTCGAAGGACCACAGAGGGACGCAGGGTGCAAGCCCTaGAGCTGCACCGGGGGCGGAGGGAACGTGGCTACCTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: PDPLEGPQRDAGCKP*SCTGGGGNVATCGQ
Trigger: CTGGCCGCAGGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGCACCCTGCGTCCCTCTGTGGTCCTTCGAGAGGGTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS CCA 90 bp AGACGTCAGGCGCGGCCCTTCCCCGACCTACTTGGCCGCTCCAGATaGACTCCCTCCGACTCTCTGGTTTCCCAGGGGCAGCCGACCTCC +
Preference number: 5 (lower is better)
Translates to: RRQARPFPDLLGRSR*TPSDSLVSQGQPTS
Trigger: GGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237177.10
ENST00000547893.5
ENST00000551025.4
ENST00000671703.1
ENST00000671875.1
ENST00000673299.3
CDS CCA 90 bp ACCACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTTaGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: TTCGQTSGAALPRPT*PLQMDSLRLSGFPG
Trigger: CCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 90 bp GCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTTaGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: ATCGQTSGAALPRPT*PLQMDSLRLSGFPG
Trigger: CCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS CCA 90 bp GAGAGTCACCACTTGGCCGCTCCAGATGGACTCCCTCCGACTCTCTaGTTTCCCAGGGGCAGCCGACCTCCACTCGGGGGACTACCGCGC +
Preference number: 5 (lower is better)
Translates to: ESHHLAAPDGLPPTL*FPRGSRPPLGGLPR
Trigger: GCGCGGTAGTCCCCCGAGTGGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTGGTGACTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419040.6
ENST00000548224.2
ENST00000672165.1
ENST00000673411.1
CDS TCA 90 bp GAGGGCATAGCGGGGATAGGAAGGGAGATGGGAGAATCCCTGCCATaGAAGCCTCTGTCCCCCTCCAGTCAAAGAGGCGCTGAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: EGIAGIGREMGESLP*KPLSPSSQRGAEGD
Trigger: ATCTCCCTCAGCGCCTCTTTGACTGGAGGGGGACAGAGGCTTTCATGGCAGGGATTCTCCCATCTCCCTTCCTATCCCCGCTATGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS TCA 90 bp CATCAAATAAACTTGTTCCATCACCATTGTCATCATCTGCTGCCATaGTCCTATTTCCTTTTGAGAGTCACCACCTGCGGCCAGACGTCA +
Preference number: 5 (lower is better)
Translates to: HQINLFHHHCHHLLP*SYFLLRVTTCGQTS
Trigger: TGACGTCTGGCCGCAGGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAATGGTGATGGAACAAGTTTATTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp TTGGTTCCAATAACGTTGACTTGGTTTCCCCCATGGTATGTTCACTaGCAGCTGCTTCCCCCAAGATATGTTCACTTATGGAGGGAACAT +
Preference number: 5 (lower is better)
Translates to: LVPITLTWFPPWYVH*QLLPPRYVHLWREH
Trigger: ATGTTCCCTCCATAAGTGAACATATCTTGGGGGAAGCAGCTGTCAGTGAACATACCATGGGGGAAACCAAGTCAACGTTATTGGAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp ACCTGTATCACCCCACATCCCAAGTCTTCCACAGCTAATGCAGGATaGTTACCTTCACTTTTAGCCTCACTTGAAGCATCTTGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: TCITPHPKSSTANAG*LPSLLASLEASCVK
Trigger: TTTGACACAAGATGCTTCAAGTGAGGCTAAAAGTGAAGGTAATCATCCTGCATTAGCTGTGGAAGACTTGGGATGTGGGGTGATACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp TCTTTAGTCACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTTGGTaGGCTTCAGTATTCTCACAAGAATCTTGGGTAGGTTTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SLVTGGAFFLLAFFW*ASVFSQESWVGFLV
Trigger: GACCAAGAAACCTACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGTGACTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp CATCAAATAAACTTGTTCCATCACCATTGTCATCATCTGCTGCCATaGTCCTATTTCCTTTTGAGAGTCACCACTTGGCCGCTCCAGATG +
Preference number: 5 (lower is better)
Translates to: HQINLFHHHCHHLLP*SYFLLRVTTWPLQM
Trigger: CATCTGGAGCGGCCAAGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAATGGTGATGGAACAAGTTTATTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419040.6
ENST00000548224.2
ENST00000672165.1
ENST00000673411.1
CDS CCA 90 bp TTTTGCTACAGGTCTCACTGGACTATTCAGAGGACTGATGGCTTCTaGAATAGGTCTCAGGTGATTAAGGTCAATGCTCAAAACCGAGTT +
Preference number: 5 (lower is better)
Translates to: FCYRSHWTIQRTDGF*NRSQVIKVNAQNRV
Trigger: AACTCGGTTTTGAGCATTGACCTTAATCACCTGAGACCTATTCCAGAAGCCATCAGTCCTCTGAATAGTCCAGTGAGACCTGTAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp TTTGTTTCACCAGTTGCCATTCTGTGGTCCATTAACTCAGTCTGCTaGAGTGAAGAATCTAGAGTCTCTTTAGGTAAGCAAGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: FVSPVAILWSINSVC*SEESRVSLGKQGSR
Trigger: TCTGGAGCCTTGCTTACCTAAAGAGACTCTAGATTCTTCACTTCAGCAGACTGAGTTAATGGACCACAGAATGGCAACTGGTGAAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp TGCTCAGATGCATCCTCTTCCTCAAGTAAGGCATCTTCACTAAAATaGGCACTAATGACTTCTTCAGGAGTTGAACTGGACGACATATCA +
Preference number: 5 (lower is better)
Translates to: CSDASSSSSKASSLK*ALMTSSGVELDDIS
Trigger: TGATATGTCGTCCAGTTCAACTCCTGAAGAAGTCATTAGTGCTCATTTTAGTGAAGATGCCTTACTTGAGGAAGAGGATGCATCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp CATCAAATAAACTTGTTCCATCACCATTGTCATCATCTGCTGCCATaGTCCTATTTCCTTTTGAGAGTCACCACCTGTAGTTCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: HQINLFHHHCHHLLP*SYFLLRVTTCSSSY
Trigger: GTAGCTGGAACTACAGGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAATGGTGATGGAACAAGTTTATTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS CCA 90 bp GCAAAATATCAGCTTCCTCAATTGAAGGCTGCAAAATGCTTTCAGTaGTTTCACTCACTGTTGTTGAAAGTGCCACCTTCATCTCCATAC +
Preference number: 5 (lower is better)
Translates to: AKYQLPQLKAAKCFQ*FHSLLLKVPPSSPY
Trigger: GTATGGAGATGAAGGTGGCACTTTCAACAACAGTGAGTGAAACCACTGAAAGCATTTTGCAGCCTTCAATTGAGGAAGCTGATATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 90 bp GAGGCGATGGTACTGTTAAAGAGACTGCTAGATCTTCAAGAAGTATaGAAGAAACGCAGGGCTTGCTCTTTTCTACACTACACACATTAT +
Preference number: 5 (lower is better)
Translates to: EAMVLLKRLLDLQEV*KKRRACSFLHYTHY
Trigger: ATAATGTGTGTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAGCAGTCTCTTTAACAGTACCATCGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 90 bp GGAGATGGGAAGGAAGTCTCTGTACCACAAATGGGCTCTTCACAATaGATAGTATTGTCAACAGACCTAACTAACAAACTATTTTCGTCT +
Preference number: 5 (lower is better)
Translates to: GDGKEVSVPQMGSSQ*IVLSTDLTNKLFSS
Trigger: AGACGAAAATAGTTTGTTAGTTAGGTCTGTTGACAATACTATGCATTGTGAAGAGCCCATTTGTGGTACAGAGACTTCCTTCCCATCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 90 bp CCCATTTGTGCATCACTCACTAAATTAAAAGTAAGGCTCGATGCTTaGTGTTCGGTAAGAATCTCGAAACTTCGTTCTGGCTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: PICASLTKLKVRLDA*CSVRISKLRSGFKV
Trigger: AACTTTGAAGCCAGAACGAAGTTTCGAGATTCTTACCGAACAGCAAGCATCGAGCCTTACTTTTAATTTAGTGAGTGATGCACAAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp ATCAGGAACCTGTGTTTGTATCATAGAGCTCTGTTCTTCATGAGTTaGCTTGCTGCCATCAACATTTTTGTTGGAGTTTTCCAATTCCTC +
Preference number: 5 (lower is better)
Translates to: IRNLCLYHRALFFMS*LAAINIFVGVFQFL
Trigger: GAGGAATTGGAAAACTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAGGTTCCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 90 bp TTCATTTGGACCACTCTCAGCTTTCATTGCAAGCTCTTTATTATCTaGTCCTTCAGAAACACCATTATCAAGGACTTCTCCCTTATCAGT +
Preference number: 5 (lower is better)
Translates to: FIWTTLSFHCKLFII*SFRNTIIKDFSLIS
Trigger: ACTGATAAGGGAGAAGTCCTTGATAATGGTGTTTCTGAAGGAGCAGATAATAAAGAGCTTGCAATGAAAGCTGAGAGTGGTCCAAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp GAATCACATACACCACTGGACTTGGGAATATCAGTTATTTTATGCTaGTTATCCTGGGAAACAGGTTGCTTTTTAGCAGGAGAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: ESHTPLDLGISVILC*LSWETGCFLAGERV
Trigger: AACTCTTTCTCCTGCTAAAAAGCAACCTGTTTCCCAGGATAATCAGCATAAAATAACTGATATTCCCAAGTCCAGTGGTGTATGTGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp CTTCAATGCTTTCAGGCACTTTTGTTTCCCATACTTGATGCAATTTaGAACATTCATCAGCCACTTCATCACTATGACCCATCTTATCTG +
Preference number: 5 (lower is better)
Translates to: LQCFQALLFPILDAI*NIHQPLHHYDPSYL
Trigger: CAGATAAGATGGGTCATAGTGATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAAGCATTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 90 bp AAGAGACTGCTAGATCTTCAAGAAGTATGGAAGAAACGCAGGGCTTaGTCTTTTCTACACTACACACATTATCTTTACTTAAAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: KRLLDLQEVWKKRRA*SFLHYTHYLYLKVG
Trigger: ACCTACCTTTAAGTAAAGATAATGTGTGTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAGCAGTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp TCTGAATTATCATTTCTTTTGGTATCCAATTCCAAGCCAAAGTTTTaGGACACATCTGTTTGTAATACATCCATTACCACAGGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SELSFLLVSNSKPKF*DTSVCNTSITTGAA
Trigger: AGCAGCTCCTGTGGTAATGGATGTATTACAAACAGATGTGTCTCAAAACTTTGGCTTGGAATTGGATACCAAAAGAAATGATAATTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp TATATATCAGGAACCTGTGTTTGTATCATAGAGCTCTGTTCTTCATaGGTTGACTTGCTGCCATCAACATTTTTGTTGGAGTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: YISGTCVCIIELCSS*VDLLPSTFLLEFSN
Trigger: ATTGGAAAACTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAGGTTCCTGATATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 90 bp TTTCTCCCAAGAAGAGTTAATGCGTTCACCTTTATAGTCAGAATCTaGGTTACTTTTAAACTTCGAACTTTTGCTTTCAGTCTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: FLPRRVNAFTFIVRI*VTFKLRTFAFSLWF
Trigger: GAACCAAAGACTGAAAGCAAAAGTTCGAAGTTTAAAAGTAACTCAGATTCTGACTATAAAGGTGAACGCATTAACTCTTCTTGGGAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000237177.10
ENST00000419040.6
ENST00000551025.4
ENST00000552401.5
ENST00000671703.1
ENST00000672165.1
ENST00000672842.1
ENST00000673299.3
CDS TCA 90 bp AAGTGCCACCTTCATCTCCATACCTTCAGAAATACCACAATAATCTaGATTATCATTTCTTTTGGTATCCAATTCCAAGCCAAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: KCHLHLHTFRNTTII*IIISFGIQFQAKVL
Trigger: CAAAACTTTGGCTTGGAATTGGATACCAAAAGAAATGATAATTCAGATTATTGTGGTATTTCTGAAGGTATGGAGATGAAGGTGGCACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 90 bp CAGCCTGCAAAGAATTGTCTAATATTTGAGCACTCTGATTTAAATTaGCTCCAGAACATCCCAACTGATCAATATGTAAAACTGTTACTT +
Preference number: 5 (lower is better)
Translates to: QPAKNCLIFEHSDLN*LQNIPTDQYVKLLL
Trigger: AAGTAACAGTTTTACATATTGATCAGTTGGGATGTTCTGGAGGCAATTTAAATCAGAGTGCTCAAATATTAGACAATTCTTTGCAGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 72 bp GCAAGCCCTGAAGCTGCACCGGGGGCGGAGGGAACGTaGCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: ASPEAAPGAEGT*LPAARRQARPF
Trigger: GAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS CCA 72 bp GGGAGGGGCAGGACGAGAGGCCGAAGGGACAATTCCTaGGCGCGCCCACCCATAGTCCCCGCCCAGACCCTC +
Preference number: 6 (lower is better)
Translates to: GRGRTRGRRDNS*ARPPIVPAQTL
Trigger: GAGGGTCTGGGCGGGGACTATGGGTGGGCGCGCCCAGGAATTGTCCCTTCGGCCTCTCGTCCTGCCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS GCA 72 bp GGGCAGCCGACCTCCACTCGGGGGACTACCGCGCCATaGAGCCTCTTCCTTAGCAGTCCCTCACGGACCGGG +
Preference number: 6 (lower is better)
Translates to: GQPTSTRGTTAP*SLFLSSPSRTG
Trigger: CCCGGTCCGTGAGGGACTGCTAAGGAAGAGGCTGCATGGCGCGGTAGTCCCCCGAGTGGAGGTCGGCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000237177.10
ENST00000419040.6
ENST00000547893.5
ENST00000548224.2
ENST00000551025.4
ENST00000671703.1
ENST00000671875.1
ENST00000672165.1
ENST00000673299.3
ENST00000673411.1
CDS CAA 72 bp CGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTaGGCCGCTCCAGATGGACTCCCTCCGACTCTCTGG +
Preference number: 6 (lower is better)
Translates to: RPDVRRGPSPTY*AAPDGLPPTLW
Trigger: CCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237177.10
ENST00000547893.5
ENST00000551025.4
ENST00000671703.1
ENST00000671875.1
ENST00000673299.3
CDS CAA 90 bp CACCACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTaGGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: HHLRPDVRRGPSPTY*AAPDGLPPTLWFPR
Trigger: CCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp GGCTACCTGCGGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTaGGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGTTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: GYLRPDVRRGPSPTY*AAPDGLPPTLWFPR
Trigger: CCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCCGCAGGTAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS TCA 72 bp CTCGAAGGACCACAGAGGGACGCAGGGTGCAAGCCCTaGAGCTGCACCGGGGGCGGAGGGAACGTGGCTACC +
Preference number: 6 (lower is better)
Translates to: LEGPQRDAGCKP*SCTGGGGNVAT
Trigger: GGTAGCCACGTTCCCTCCGCCCCCGGTGCAGCTTCAGGGCTTGCACCCTGCGTCCCTCTGTGGTCCTTCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS CCA 72 bp GCGCGGCCCTTCCCCGACCTACTTGGCCGCTCCAGATaGACTCCCTCCGACTCTCTGGTTTCCCAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: ARPFPDLLGRSR*TPSDSLVSQGQ
Trigger: CTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000237177.10
ENST00000547893.5
ENST00000551025.4
ENST00000671703.1
ENST00000671875.1
ENST00000673299.3
CDS CCA 72 bp GGCCAGACGTCAGGCGCGGCCCTTCCCCGACCTACTTaGCCGCTCCAGATGGACTCCCTCCGACTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: GQTSGAALPRPT*PLQMDSLRLSG
Trigger: ACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTAGGTCGGGGAAGGGCCGCGCCTGACGTCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237177.10
ENST00000547893.5
ENST00000551025.4
ENST00000671703.1
ENST00000671875.1
ENST00000673299.3
CDS CCA 72 bp CACTTGGCCGCTCCAGATGGACTCCCTCCGACTCTCTaGTTTCCCAGGGGCAGCCGACCTCCACTCGGGGGA +
Preference number: 6 (lower is better)
Translates to: HLAAPDGLPPTL*FPRGSRPPLGG
Trigger: TCCCCCGAGTGGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419040.6
ENST00000548224.2
ENST00000672165.1
ENST00000673411.1
CDS CCA 72 bp TACTTGGCCGCTCCAGATGGACTCCCTCCGACTCTCTaGTTTCCCAGGGGCAGCCGACCTCCACTCGGGGGA +
Preference number: 6 (lower is better)
Translates to: YLAAPDGLPPTL*FPRGSRPPLGG
Trigger: TCCCCCGAGTGGAGGTCGGCTGCCCCTGGGAAACCAGAGAGTCGGAGGGAGTCCATCTGGAGCGGCCAAGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000237177.10
ENST00000547893.5
ENST00000551025.4
ENST00000671703.1
ENST00000671875.1
ENST00000673299.3
CDS TCA 72 bp GCGGGGATAGGAAGGGAGATGGGAGAATCCCTGCCATaGAAGCCTCTGTCCCCCTCCAGTCAAAGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: AGIGREMGESLP*KPLSPSSQRGA
Trigger: AGCGCCTCTTTGACTGGAGGGGGACAGAGGCTTTCATGGCAGGGATTCTCCCATCTCCCTTCCTATCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS CCA 72 bp GGGAAAGGCCTTGAGGAGAGGCGAAAGGTTTGCTGCTaGAGGTGTGGAGAATGGAAAAAGACCAAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GKGLEERRKVCC*RCGEWKKTKEE
Trigger: CTCTTCCTTGGTCTTTTTCCATTCTCCACACCTCCAGCAGCAAACCTTTCGCCTCTCCTCAAGGCCTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS GCA 72 bp AGCACAGGAGGTCAAACCTGTAGTAAGCCGAGATCTTaGCATTGCACTCCAGCCTGGGCTATAGTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: STGGQTCSKPRS*HCTPAWAIVSK
Trigger: TTTTGAGACTATAGCCCAGGCTGGAGTGCAATGGCAAGATCTCGGCTTACTACAGGTTTGACCTCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS CAA 72 bp CGATCCTGGGTTCAGTCACTGCTAGAAGAGCAACCTTaGGTTCCAATAACGTTGACTTGGTTTCCCCCATGG +
Preference number: 6 (lower is better)
Translates to: RSWVQSLLEEQP*VPITLTWFPPW
Trigger: CCATGGGGGAAACCAAGTCAACGTTATTGGAACCAAAGGTTGCTCTTCTAGCAGTGACTGAACCCAGGATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 72 bp ATCTCGAAACTTCGTTCTGGCTTCAAAGTTGCATGCTaGGATGTCTGTGCATCCTCTATGCTGCTTCCTTCG +
Preference number: 6 (lower is better)
Translates to: ISKLRSGFKVAC*DVCASSMLLPS
Trigger: CGAAGGAAGCAGCATAGAGGATGCACAGACATCCCAGCATGCAACTTTGAAGCCAGAACGAAGTTTCGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp CTGAGATACCGATCCTGGGTTCAGTCACTGCTAGAAGAGCAACCTTaGGTTCCAATAACGTTGACTTGGTTTCCCCCATGGTATGTTCAC +
Preference number: 6 (lower is better)
Translates to: LRYRSWVQSLLEEQP*VPITLTWFPPWYVH
Trigger: GTGAACATACCATGGGGGAAACCAAGTCAACGTTATTGGAACCAAAGGTTGCTCTTCTAGCAGTGACTGAACCCAGGATCGGTATCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 72 bp AGAATCTCGAAACTTCGTTCTGGCTTCAAAGTTGCATaGTGGGATGTCTGTGCATCCTCTATGCTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: RISKLRSGFKVA*WDVCASSMLLP
Trigger: AGGAAGCAGCATAGAGGATGCACAGACATCCCAGCATGCAACTTTGAAGCCAGAACGAAGTTTCGAGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 72 bp GCTAGAAGAGCAACCTTTGGTTCCAATAACGTTGACTaGGTTTCCCCCATGGTATGTTCACTGACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: ARRATFGSNNVD*VSPMVCSLTAA
Trigger: AGCAGCTGTCAGTGAACATACCATGGGGGAAACCAAGTCAACGTTATTGGAACCAAAGGTTGCTCTTCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp ATAACGTTGACTTGGTTTCCCCCATGGTATGTTCACTaGCAGCTGCTTCCCCCAAGATATGTTCACTTATGG +
Preference number: 6 (lower is better)
Translates to: ITLTWFPPWYVH*QLLPPRYVHLW
Trigger: CCATAAGTGAACATATCTTGGGGGAAGCAGCTGTCAGTGAACATACCATGGGGGAAACCAAGTCAACGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp ACCCCACATCCCAAGTCTTCCACAGCTAATGCAGGATaGTTACCTTCACTTTTAGCCTCACTTGAAGCATCT +
Preference number: 6 (lower is better)
Translates to: TPHPKSSTANAG*LPSLLASLEAS
Trigger: AGATGCTTCAAGTGAGGCTAAAAGTGAAGGTAATCATCCTGCATTAGCTGTGGAAGACTTGGGATGTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp ACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTTGGTaGGCTTCAGTATTCTCACAAGAATCTTGGGTAGGT +
Preference number: 6 (lower is better)
Translates to: TGGAFFLLAFFW*ASVFSQESWVG
Trigger: ACCTACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 72 bp GCTGGTATAGACTCGCACTTAAGAGTCTCTAGCAGCTaGTTCTCTGGAGTCTTTAACTCCCACTCACTTTTT +
Preference number: 6 (lower is better)
Translates to: AGIDSHLRVSSS*FSGVFNSHSLF
Trigger: AAAAAGTGAGTGGGAGTTAAAGACTCCAGAGAAGCAGCTGCTAGAGACTCTTAAGTGCGAGTCTATACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 72 bp AGGTCTCACTGGACTATTCAGAGGACTGATGGCTTCTaGAATAGGTCTCAGGTGATTAAGGTCAATGCTCAA +
Preference number: 6 (lower is better)
Translates to: RSHWTIQRTDGF*NRSQVIKVNAQ
Trigger: TTGAGCATTGACCTTAATCACCTGAGACCTATTCCAGAAGCCATCAGTCCTCTGAATAGTCCAGTGAGACCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 72 bp AGTCACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTaGGTGAGCTTCAGTATTCTCACAAGAATCTTGGGT +
Preference number: 6 (lower is better)
Translates to: SHRRGLLLTGFL*VSFSILTRILG
Trigger: ACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp GGGATCTTTAGTCACAGGAGGGGCCTTCTTCTTACTGGCTTTCTTTaGGTGAGCTTCAGTATTCTCACAAGAATCTTGGGTAGGTTTCTT +
Preference number: 6 (lower is better)
Translates to: GIFSHRRGLLLTGFL*VSFSILTRILGRFL
Trigger: AAGAAACCTACCCAAGATTCTTGTGAGAATACTGAAGCTCACCAAAAGAAAGCCAGTAAGAAGAAGGCCCCTCCTGTGACTAAAGATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp AAGGAAGAGTCGAAGAGTCAAAGACAACTTGATGCCTaGAGCACAAATGCTCAGCTCCTACGAATCCTACAT +
Preference number: 6 (lower is better)
Translates to: KEESKSQRQLDA*STNAQLLRILH
Trigger: ATGTAGGATTCGTAGGAGCTGAGCATTTGTGCTTCAGGCATCAAGTTGTCTTTGACTCTTCGACTCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS TCA 72 bp ATTGTCATCATCTGCTGCCATGATCCTATTTCCTTTTaGGAGTCACCACCTGTAGTTCCAGCTACTTGGAAG +
Preference number: 6 (lower is better)
Translates to: IVIICCHDPISF*ESPPVVPATWK
Trigger: CTTCCAAGTAGCTGGAACTACAGGTGGTGACTCTCAAAAGGAAATAGGATCATGGCAGCAGATGATGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547893.5
ENST00000671875.1
CDS TCA 72 bp GAATCTAGAGTCTCTTTAGGTAAGCAAGGCTCCAGATaGCACGACTTACTCTCAACCAGTGGTGTAACTATA +
Preference number: 6 (lower is better)
Translates to: ESRVSLGKQGSR*HDLLSTSGVTI
Trigger: TATAGTTACACCACTGGTTGAGAGTAAGTCGTGTCATCTGGAGCCTTGCTTACCTAAAGAGACTCTAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp CCAGTTGCCATTCTGTGGTCCATTAACTCAGTCTGCTaGAGTGAAGAATCTAGAGTCTCTTTAGGTAAGCAA +
Preference number: 6 (lower is better)
Translates to: PVAILWSINSVC*SEESRVSLGKQ
Trigger: TTGCTTACCTAAAGAGACTCTAGATTCTTCACTTCAGCAGACTGAGTTAATGGACCACAGAATGGCAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp GCATCCTCTTCCTCAAGTAAGGCATCTTCACTAAAATaGGCACTAATGACTTCTTCAGGAGTTGAACTGGAC +
Preference number: 6 (lower is better)
Translates to: ASSSSSKASSLK*ALMTSSGVELD
Trigger: GTCCAGTTCAACTCCTGAAGAAGTCATTAGTGCTCATTTTAGTGAAGATGCCTTACTTGAGGAAGAGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 72 bp GCATCACTCACTAAATTAAAAGTAAGGCTCGATGCTTaGTGTTCGGTAAGAATCTCGAAACTTCGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: ASLTKLKVRLDA*CSVRISKLRSG
Trigger: GCCAGAACGAAGTTTCGAGATTCTTACCGAACAGCAAGCATCGAGCCTTACTTTTAATTTAGTGAGTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 72 bp GCTTTCATTTCTAAGAACTTTTGCTACAGGTCTCACTaGACTATTCAGAGGACTGATGGCTTCTGGAATAGG +
Preference number: 6 (lower is better)
Translates to: AFISKNFCYRSH*TIQRTDGFWNR
Trigger: CCTATTCCAGAAGCCATCAGTCCTCTGAATAGTCCAGTGAGACCTGTAGCAAAAGTTCTTAGAAATGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 72 bp TATAAGTCCAAACAATTTCTTGATGGTACACAGGATTaGGAAGCGCTGTCAGAAACAGCACTGTCCAACCCA +
Preference number: 6 (lower is better)
Translates to: YKSKQFLDGTQD*EALSETALSNP
Trigger: TGGGTTGGACAGTGCTGTTTCTGACAGCGCTTCCAAATCCTGTGTACCATCAAGAAATTGTTTGGACTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000237177.10
ENST00000419040.6
ENST00000547893.5
ENST00000548224.2
ENST00000551025.4
ENST00000552401.5
ENST00000671703.1
ENST00000671875.1
ENST00000672165.1
ENST00000672842.1
ENST00000673299.3
ENST00000673411.1
CDS TCA 72 bp GGAACCTGTGTTTGTATCATAGAGCTCTGTTCTTCATaGGTTGACTTGCTGCCATCAACATTTTTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: GTCVCIIELCSS*VDLLPSTFLLE
Trigger: CTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAGGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 72 bp ACCACTCTCAGCTTTCATTGCAAGCTCTTTATTATCTaGTCCTTCAGAAACACCATTATCAAGGACTTCTCC +
Preference number: 6 (lower is better)
Translates to: TTLSFHCKLFII*SFRNTIIKDFS
Trigger: GGAGAAGTCCTTGATAATGGTGTTTCTGAAGGAGCAGATAATAAAGAGCTTGCAATGAAAGCTGAGAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 72 bp GTACTGTTAAAGAGACTGCTAGATCTTCAAGAAGTATaGAAGAAACGCAGGGCTTGCTCTTTTCTACACTAC +
Preference number: 6 (lower is better)
Translates to: VLLKRLLDLQEV*KKRRACSFLHY
Trigger: GTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAGCAGTCTCTTTAACAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 72 bp TCAACAGACCTAACTAACAAACTATTTTCGTCTTCCTaGTTGGTTTCTGAGATACCGATCCTGGGTTCAGTC +
Preference number: 6 (lower is better)
Translates to: STDLTNKLFSSS*LVSEIPILGSV
Trigger: GACTGAACCCAGGATCGGTATCTCAGAAACCAACAAGGAAGACGAAAATAGTTTGTTAGTTAGGTCTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp TTCCTTCTTCAGTCAGGATCTCTTCATATAAGTCCAAACAATTTCTaGATGGTACACAGGATTTGGAAGCGCTGTCAGAAACAGCACTGT +
Preference number: 6 (lower is better)
Translates to: FLLQSGSLHISPNNF*MVHRIWKRCQKQHC
Trigger: ACAGTGCTGTTTCTGACAGCGCTTCCAAATCCTGTGTACCATCAAGAAATTGTTTGGACTTATATGAAGAGATCCTGACTGAAGAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000237177.10
ENST00000419040.6
ENST00000547893.5
ENST00000548224.2
ENST00000551025.4
ENST00000552401.5
ENST00000671703.1
ENST00000671875.1
ENST00000672165.1
ENST00000672842.1
ENST00000673299.3
ENST00000673411.1
CDS CAA 90 bp GTATTGTCAACAGACCTAACTAACAAACTATTTTCGTCTTCCTTGTaGGTTTCTGAGATACCGATCCTGGGTTCAGTCACTGCTAGAAGA +
Preference number: 6 (lower is better)
Translates to: VLSTDLTNKLFSSSL*VSEIPILGSVTARR
Trigger: TCTTCTAGCAGTGACTGAACCCAGGATCGGTATCTCAGAAACCAACAAGGAAGACGAAAATAGTTTGTTAGTTAGGTCTGTTGACAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp GGTCAATGCTCAAAACCGAGTTATCATCATCATGATATACTGAGTTaGTTTCACCAGTTGCCATTCTGTGGTCCATTAACTCAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: GQCSKPSYHHHDILS*FHQLPFCGPLTQSA
Trigger: AGCAGACTGAGTTAATGGACCACAGAATGGCAACTGGTGAAACAAACTCAGTATATCATGATGATGATAACTCGGTTTTGAGCATTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp GAAAGCCTGGAGCAACAGATCGGCTTGTCCAGGAAGAAGAACAACTaGATTTACTGCTTGAATTATCAGACTCCAGAGCTAAATGAATAT +
Preference number: 6 (lower is better)
Translates to: ESLEQQIGLSRKKNN*IYCLNYQTPELNEY
Trigger: ATATTCATTTAGCTCTGGAGTCTGATAATTCAAGCAGTAAATCAAGTTGTTCTTCTTCCTGGACAAGCCGATCTGTTGCTCCAGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp ATAGTATTGTCAACAGACCTAACTAACAAACTATTTTCGTCTTCCTaGTTGGTTTCTGAGATACCGATCCTGGGTTCAGTCACTGCTAGA +
Preference number: 6 (lower is better)
Translates to: IVLSTDLTNKLFSSS*LVSEIPILGSVTAR
Trigger: TCTAGCAGTGACTGAACCCAGGATCGGTATCTCAGAAACCAACAAGGAAGACGAAAATAGTTTGTTAGTTAGGTCTGTTGACAATACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 72 bp ATTCTGTGGTCAAGTCGATATAGGTTTCCTCAACAATaGATTTTAAAGGCCTGTTTGCCACTTGTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: ILWSSRYRFPQQ*ILKACLPLVPF
Trigger: AAAAGGCACAAGTGGCAAACAGGCCTTTAAAATGCATTGTTGAGGAAACCTATATCGACTTGACCACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 72 bp GCTTGGACAGTGTACTTCCAAGGAGCGCTCTTCGGATaGAGAGTTCTTTATATTATCAAAGCAGATGTTAAA +
Preference number: 6 (lower is better)
Translates to: AWTVYFQGALFG*RVLYIIKADVK
Trigger: TTTAACATCTGCTTTGATAATATAAAGAACTCTCAATCCGAAGAGCGCTCCTTGGAAGTACACTGTCCAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 90 bp AAACCGAGTTATCATCATCATGATATACTGAGTTTGTTTCACCAGTaGCCATTCTGTGGTCCATTAACTCAGTCTGCTGAAGTGAAGAAT +
Preference number: 6 (lower is better)
Translates to: KPSYHHHDILSLFHQ*PFCGPLTQSAEVKN
Trigger: ATTCTTCACTTCAGCAGACTGAGTTAATGGACCACAGAATGGCAACTGGTGAAACAAACTCAGTATATCATGATGATGATAACTCGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp CTTGGACAGTGTACTTCCAAGGAGCGCTCTTCGGATTaGGAGTTCTTTATATTATCAAAGCAGATGTTAAAA +
Preference number: 6 (lower is better)
Translates to: LGQCTSKERSSD*EFFILSKQMLK
Trigger: TTTTAACATCTGCTTTGATAATATAAAGAACTCTCAATCCGAAGAGCGCTCCTTGGAAGTACACTGTCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp CTGTGTTTGTATCATAGAGCTCTGTTCTTCATGAGTTaGCTTGCTGCCATCAACATTTTTGTTGGAGTTTTC +
Preference number: 6 (lower is better)
Translates to: LCLYHRALFFMS*LAAINIFVGVF
Trigger: GAAAACTCCAACAAAAATGTTGATGGCAGCAAGTCAACTCATGAAGAACAGAGCTCTATGATACAAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp TTTCAGGCACTTTTGTTTCCCATACTTGATGCAATTTaGAACATTCATCAGCCACTTCATCACTATGACCCA +
Preference number: 6 (lower is better)
Translates to: FQALLFPILDAI*NIHQPLHHYDP
Trigger: TGGGTCATAGTGATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp TTAAGGTCAATGCTCAAAACCGAGTTATCATCATCATaGTATACTGAGTTTGTTTCACCAGTTGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: LRSMLKTELSSS*YTEFVSPVAIL
Trigger: CAGAATGGCAACTGGTGAAACAAACTCAGTATATCATGATGATGATAACTCGGTTTTGAGCATTGACCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp AGCAATTCTCTGTTGGAGTTGTCCACACTCCTTTTCTaGCTATTTGAATACTGTGCATTCTGTTTACTTGTT +
Preference number: 6 (lower is better)
Translates to: SNSLLELSTLLF*LFEYCAFCLLV
Trigger: AACAAGTAAACAGAATGCACAGTATTCAAATAGTCAGAAAAGGAGTGTGGACAACTCCAACAGAGAATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS TCA 72 bp TCTTCAATGCTTTCAGGCACTTTTGTTTCCCATACTTaGTGCAATTTGAAACATTCATCAGCCACTTCATCA +
Preference number: 6 (lower is better)
Translates to: SSMLSGTFVSHT*CNLKHSSATSS
Trigger: TGATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAAGCATTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS GCA 72 bp CTAGATCTTCAAGAAGTATGGAAGAAACGCAGGGCTTaGTCTTTTCTACACTACACACATTATCTTTACTTA +
Preference number: 6 (lower is better)
Translates to: LDLQEVWKKRRA*SFLHYTHYLYL
Trigger: TAAGTAAAGATAATGTGTGTAGTGTAGAAAAGAGCAAGCCCTGCGTTTCTTCCATACTTCTTGAAGATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CAA 72 bp TTCTTCAATGCTTTCAGGCACTTTTGTTTCCCATACTaGATGCAATTTGAAACATTCATCAGCCACTTCATC +
Preference number: 6 (lower is better)
Translates to: FFNAFRHFCFPY*MQFETFISHFI
Trigger: GATGAAGTGGCTGATGAATGTTTCAAATTGCATCAAGTATGGGAAACAAAAGTGCCTGAAAGCATTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3
CDS CCA 72 bp GTTACTTTTAAACTTCGAACTTTTGCTTTCAGTCTTTaGTTCACCTTTACCATATTTCTCAGGATGTCCTTG +
Preference number: 6 (lower is better)
Translates to: VTFKLRTFAFSL*FTFTIFLRMSL
Trigger: CAAGGACATCCTGAGAAATATGGTAAAGGTGAACCAAAGACTGAAAGCAAAAGTTCGAAGTTTAAAAGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000237177.10
ENST00000419040.6
ENST00000551025.4
ENST00000552401.5
ENST00000671703.1
ENST00000672165.1
ENST00000672842.1
ENST00000673299.3
CDS CAA 72 bp CATATTCTACTTGCAAATCATTATATGTTGCCTCCTTaGCAGTTCCTTCTTCAGTCAGGATCTCTTCATATA +
Preference number: 6 (lower is better)
Translates to: HILLANHYMLPP*QFLLQSGSLHI
Trigger: TATATGAAGAGATCCTGACTGAAGAAGGAACTGCAAAGGAGGCAACATATAATGATTTGCAAGTAGAATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000237177.10
ENST00000419040.6
ENST00000547893.5
ENST00000548224.2
ENST00000551025.4
ENST00000552401.5
ENST00000671703.1
ENST00000671875.1
ENST00000672165.1
ENST00000672842.1
ENST00000673299.3
ENST00000673411.1
CDS CAA 72 bp TCAAGTTTGCCTTCATCACTATCTCTTCCAAAGCTTTaGGAATCACATACTAAGATTTTCTTAAGCTTTGCA +
Preference number: 6 (lower is better)
Translates to: SSLPSSLSLPKL*ESHTKIFLSFA
Trigger: TGCAAAGCTTAAGAAAATCTTAGTATGTGATTCCAAAAGCTTTGGAAGAGATAGTGATGAAGGCAAACTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237177.10
ENST00000551025.4
ENST00000671703.1
ENST00000673299.3