Pregenerated sensors for CASP8 (Homo sapiens)
Ensembl gene IDs: ENSG00000064012Ensembl transcript IDs: ENST00000264274.13, ENST00000264275.9, ENST00000323492.11, ENST00000339403.6, ENST00000358485.8, ENST00000392258.7, ENST00000392263.6, ENST00000392266.7, ENST00000413726.5, ENST00000424461.5, ENST00000429881.1, ENST00000432109.6, ENST00000437283.5, ENST00000440732.5, ENST00000444430.2, ENST00000447616.5, ENST00000450491.5, ENST00000471383.5, ENST00000490682.5, ENST00000673742.1
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGATAGAGCATGACCCTGTAGGCAGAAATTTGAGCCCTGCCTGGTGTCTGAAGACATCAAGGCATCCTTaGTGGGTTCTTGCTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LIEHDPVGRNLSPAWCLKTSRHP*WVLASF Trigger: AAAGGAAGCAAGAACCCATCAAGGATGCCTTGATGT...CTTCAGACACCAGGCAGGGCTCAAATTTCTGCCTACAGGGTCATGCTCTATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| 3UTR-3UTR GCA 90 bp | ATATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCCAGAAATTTGAGCCCTaGCTGGTGTCTGAAGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ISSRFMSSSSLHLEISSCQKFEP*LVSEVP Trigger: GGGAACTTCAGACACCAGGCAGGGCTCAAATTTCTG...GCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| 3UTR TCA 72 bp | GCTTCCTTTGCGGAATGTAGTCCAGGCTCAGGAACTTaGGGGAGGCCAGATCTTCACTGTCCAGTTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ASFAECSPGSGT*GRPDLHCPVVP Trigger: GGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGACTACATTCCGCAAAGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAAGGGTTCTTGCTTCCTTaGCGGAATGTAGTCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: IQQVHVIIQFAFGDFLLQGFLLP*RNVVQA Trigger: AGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCC...TTGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR TCA 90 bp | CGGAATGTAGTCCAGGCTCAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGCCAGGCTCAGGAACTTaGGGGAGGCCAGATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNVVQAQELEGGQIFTVQPGSGT*GRPDLH Trigger: GTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGG...CTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGACTACATTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CCA 90 bp | CATCAAGGCATCCTTGATGGGTTCTTGCTTCCTTTGCGGAATGTAGTCCAGGCTCGCTCCACCCTTTCCTaGCACCATCGCAGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HQGILDGFLLPLRNVVQARSTLS*HHRSLR Trigger: TCGGAGACTGCGATGGTGCCAGGAAAGGGTGGAGCG...AGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCCATCAAGGATGCCTTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR GCA 90 bp | AGAAATTTGAGCCCTGCCTGGTGTCTGAAGTTCCCTTTCCATCTCCTCCTTTCTCTGCCTAACTCCACGTaGTCAGCAGGGAAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPAWCLKFPFHLLLSLPNST*SAGKGV Trigger: CACCCCCTTCCCTGCTGAGCACGTGGAGTTAGGCAG...AGAAAGGAGGAGATGGAAAGGGAACTTCAGACACCAGGCAGGGCTCAAATTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR TCA 90 bp | CTGATAGAGCATGACCCTGTAGGCAGAAATTTGAGCCCTGCCTGGTGTCTGAAGAAGGAGGAGAACCTGTaGAAACACTTCCCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIEHDPVGRNLSPAWCLKKEENL*KHFPPA Trigger: TGCTGGAGGGAAGTGTTTTCACAGGTTCTCCTCCTT...CTTCAGACACCAGGCAGGGCTCAAATTTCTGCCTACAGGGTCATGCTCTATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCTCAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGTTGTTCCCCAATCACTTCCTGTTGAGTTaGCTAGCAAATTCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAQELEGGQIFTVQLFPNHFLLS*LANSAG Trigger: CCCTGCTGAATTTGCTAGTCAACTCAACAGGAAGTG...ATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CCA 90 bp | GGCATCCTTGATGGGTTCTTGCTTCCTTTGCGGAATGTAGTCCAGGCTCAGGAAAATTTGAGCCCTGCCTaGTGTCTGAAGTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GILDGFLLPLRNVVQAQENLSPA*CLKFPF Trigger: GAAAGGGAACTTCAGACACCAGGCAGGGCTCAAATT...TTCCTGAGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCCATCAAGGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CCA 90 bp | GAGCATGACCCTGTAGGCAGAAATTTGAGCCCTGCCTGGTGTCTGAAGTTCCCTAGGCTCTTGTTGATTTaGGCACAGACTCTTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHDPVGRNLSPAWCLKFPRLLLI*AQTLFR Trigger: CCTGAAAAGAGTCTGTGCCCAAATCAACAAGAGCCT...AGGGAACTTCAGACACCAGGCAGGGCTCAAATTTCTGCCTACAGGGTCATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR GCA 90 bp | AAAATATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTCCACCCTGGCTCTTCTaGCTCCCTCCATGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KISSRFMSSSSLHLEISSPPWLF*LPPWPH Trigger: GTGAGGCCATGGAGGGAGGCAGAAGAGCCAGGGTGG...AGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR GCA 90 bp | ATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAACCGAGTCCCCTAACCTaGCTAACTCCACGTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQQVHVIIQFAFGDFLLQPSPLT*LTPRAQ Trigger: CTGAGCACGTGGAGTTAGGCAGGTTAGGGGACTCGG...TTGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR GCA 90 bp | CGGAATGTAGTCCAGGCTCAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGTGTCATCATCCAGTTTaGATTTGGAGATTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNVVQAQELEGGQIFTVQCHHPV*IWRFPL Trigger: AAGAGGAAATCTCCAAATGCAAACTGGATGATGACA...CTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGACTACATTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGCCAGGCTCAGGAACTTaGGGGAGGCCAGATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKPGSGT*GRPDLH Trigger: GTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGG...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGGCCCTGCCTGGTGTCTaGAGTTCCCTTTCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKALPGV*SSLSIS Trigger: GGAGATGGAAAGGGAACTTCAGACACCAGGCAGGGC...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGGCCTGGGCAACAGAGTaGGACCCTGCATCCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKAWATE*DPASKC Trigger: ACACTTGGATGCAGGGTCTCACTCTGTTGCCCAGGC...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAGGTGGAGGCTGCAGTaGGCTGAGATCACACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKRWRLQ*AEITPL Trigger: CAGTGGTGTGATCTCAGCTCACTGCAGCCTCCACCT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | ATATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCCATAAAGATTTCTGCTaGAGTCCATCCGCTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSRFMSSSSLHLEISSCHKDFC*SPSAPP Trigger: GGGTGGAGCGGATGGACTTCAGCAGAAATCTTTATG...GCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR GCA 90 bp | ATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAACAGAAATTTGAGCCCTaGCTGGTGTCTGAAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQQVHVIIQFAFGDFLLQQKFEP*LVSEVP Trigger: GGGAACTTCAGACACCAGGCAGGGCTCAAATTTCTG...TTGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGCAGGGAGGTGGAGGCTaGAGTGAGCTGAGATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKQGGGG*SELRSH Trigger: GTGTGATCTCAGCTCACTGCAGCCTCCACCTCCCTG...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | AGAAATTTGAGCCCTGCCTGGTGTCTGAAGTTCCCTTTCCATCTCCTCCTTTCTTCTTCTCCATCTCTATaGAAATATCCAGCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPAWCLKFPFHLLLSSSPSL*KYPAGS Trigger: TGAACCTGCTGGATATTTTCATAGAGATGGAGAAGA...AGAAAGGAGGAGATGGAAAGGGAACTTCAGACACCAGGCAGGGCTCAAATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR TCA 90 bp | ATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAAACATCAAGGCATCCTTaGTGGGTTCTTGCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQQVHVIIQFAFGDFLLQTSRHP*WVLASF Trigger: AAAGGAAGCAAGAACCCATCAAGGATGCCTTGATGT...TTGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR TCA 90 bp | TATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCATCTGCTCACTTCTTCTaGAATCTGATAGAGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: YPAGSCHHPVCIWRFPLASAHFF*NLIEHD Trigger: GTCATGCTCTATCAGATTTCAGAAGAAGTGAGCAGA...TGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGCTGTCCCTAATGCTGTaGAGTTTGGGCACTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKLSLML*SLGTFS Trigger: GGAGAAAGTGCCCAAACTTCACAGCATTAGGGACAG...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR GCA 90 bp | ATATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCTCAGGAAGGACAGATTaGTTTCCTCCAACATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSRFMSSSSLHLEISSCSGRTD*FPPTFS Trigger: AGAGAATGTTGGAGGAAAGCAATCTGTCCTTCCTGA...GCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGCAGAAATTTGAGCCCTaGCTGGTGTCTGAAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKQKFEP*LVSEVP Trigger: GGGAACTTCAGACACCAGGCAGGGCTCAAATTTCTG...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTCAGCAGGCTCTTGTTaGTTTGGGCACAGACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKSAGSC*FGHRLF Trigger: AAAGAGTCTGTGCCCAAATCAACAAGAGCCTGCTGA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | ATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAAAAATCTGATAGAGCATaGCCCTGTAGGCAGAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: IQQVHVIIQFAFGDFLLQKSDRA*PCRQKF Trigger: AAATTTCTGCCTACAGGGTCATGCTCTATCAGATTT...TTGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAATTTGAGCCCTGCCTaGTGTCTGAAGTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKNLSPA*CLKFPF Trigger: GAAAGGGAACTTCAGACACCAGGCAGGGCTCAAATT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGACATCAAGGCATCCTTaGTGGGTTCTTGCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKTSRHP*WVLASF Trigger: AAAGGAAGCAAGAACCCATCAAGGATGCCTTGATGT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CCA 90 bp | TATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAAACATTCTCTTTTCCTaGAGTCTCTGGAATAACATC | + |
|
Preference number: 4 (lower is better) Translates to: YPAGSCHHPVCIWRFPLANILFS*SLWNNI Trigger: GATGTTATTCCAGAGACTCCAGGAAAAGAGAATGTT...TGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAGGCTCTTGTTGATTTaGGCACAGACTCTTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKRLLLI*AQTLFR Trigger: CCTGAAAAGAGTCTGTGCCCAAATCAACAAGAGCCT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTCTGCTCACTTCTTCTaGAATCTGATAGAGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKSAHFF*NLIEHD Trigger: GTCATGCTCTATCAGATTTCAGAAGAAGTGAGCAGA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGGGAGAATATAATCTGTaGAAACACTTCCCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKGEYNL*KHFPPA Trigger: TGCTGGAGGGAAGTGTTTTCACAGATTATATTCTCC...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTCAGGAAGGACAGATTaGTTTCCTCCAACATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKSGRTD*FPPTFS Trigger: AGAGAATGTTGGAGGAAAGCAATCTGTCCTTCCTGA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGGGGCACTTTCTCCCGTaGTTTTGCAAAATTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKGHFLP*FCKIVI Trigger: AATCACAATTTTGCAAAAGCACGGGAGAAAGTGCCC...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGACTATCCTGTTCTCTTaGAGAGTCCGAGATTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKTILFS*RVRDCH Trigger: ATGACAATCTCGGACTCTCCAAGAGAACAGGATAGT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTCTTCTCCATCTCTATaGAAATATCCAGCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKSSPSL*KYPAGS Trigger: TGAACCTGCTGGATATTTTCATAGAGATGGAGAAGA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTTTGTCCAAAGTCTGTaGTTCACTATCCTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKFVQSL*FTILFS Trigger: AGAGAACAGGATAGTGAATCACAGACTTTGGACAAA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAAATCTGATAGAGCATaGCCCTGTAGGCAGAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKKSDRA*PCRQKF Trigger: AAATTTCTGCCTACAGGGTCATGCTCTATCAGATTT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR TCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGGCTTTTGCAAAATTGTaGTTGTTGATGATCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKAFAKL*LLMIRQ Trigger: CTGTCTGATCATCAACAATCACAATTTTGCAAAAGC...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGACCTCAATTCTGATCTaGTCACTTCTTCTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKTSILI*SLLLKS Trigger: AGATTTCAGAAGAAGTGAGCAGATCAGAATTGAGGT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTGTCATCATCCAGTTTaGATTTGGAGATTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKCHHPV*IWRFPL Trigger: AAGAGGAAATCTCCAAATGCAAACTGGATGATGACA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAGTATCCCCGAGGTTTaGTTTTCATTTGGTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKSIPEV*FSFGKL Trigger: AAGTTTACCAAATGAAAAGCAAACCTCGGGGATACT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAACATTCTCTTTTCCTaGAGTCTCTGGAATAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKNILFS*SLWNNI Trigger: GATGTTATTCCAGAGACTCCAGGAAAAGAGAATGTT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGCATCCAGTTTGCATTTaGAGATTTCCTCTTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKHPVCI*RFPLAK Trigger: TTTTGCAAGAGGAAATCTCCAAATGCAAACTGGATG...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR GCA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTTTCTCCCGTGCTTTTaGAAAATTGTGATTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RIVTNDVINGLNLCAFLKFLPCF*KIVIVD Trigger: ATCAACAATCACAATTTTGCAAAAGCACGGGAGAAA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS GCA 90 bp | CTCCACCCTTTCCTGGCACCATCGCAGTCTCCGAGTCCCCTAACCTaGCTAACTCCACGTGCTCAGCAGGGAAGGGGGTGGGAAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHPFLAPSQSPSPLT*LTPRAQQGRGWERL Trigger: GAGCCTTTCCCACCCCCTTCCCTGCTGAGCACGTGGAGTTAGGCAGGTTAGGGGACTCGGAGACTGCGATGGTGCCAGGAAAGGGTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358485.8 ENST00000437283.5 |
||
| CDS CCA 90 bp | TCAAGGGCTCAGGCGGCCAAGGCCCAACCTCACGTGCCCAGAAAGTaGACGCACCCAGGGGCTGCTCAGACAGCAGATGCTCCAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: SRAQAAKAQPHVPRK*THPGAAQTADAPEM Trigger: CATTTCTGGAGCATCTGCTGTCTGAGCAGCCCCTGGGTGCGTCCACTTTCTGGGCACGTGAGGTTGGGCCTTGGCCGCCTGAGCCCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000264275.9 ENST00000392258.7 ENST00000440732.5 ENST00000450491.5 ENST00000471383.5 ENST00000490682.5 |
||
| CDS GCA 90 bp | GGCACCATCGCAGTCTCCGAGTCCCCTAACCTGCCTAACTCCACGTaGTCAGCAGGGAAGGGGGTGGGAAAGGCTCCCAGGAAGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GTIAVSESPNLPNST*SAGKGVGKAPRKKF Trigger: AAACTTCTTCCTGGGAGCCTTTCCCACCCCCTTCCCTGCTGAGCACGTGGAGTTAGGCAGGTTAGGGGACTCGGAGACTGCGATGGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358485.8 ENST00000437283.5 |
||
| CDS TCA 90 bp | TCTTGCCCACTGGTATTCCTCAGGCAGCCACCAGTCACCTTCTTCTaGAGCTGTTGGCGGGGTACAGGCAGGCAGGAAGCTCAGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCPLVFLRQPPVTFF*SCWRGTGRQEAQSE Trigger: TTCAGACTGAGCTTCCTGCCTGCCTGTACCCCGCCAACAGCTTCAGAAGAAGGTGACTGGTGGCTGCCTGAGGAATACCAGTGGGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000264275.9 ENST00000440732.5 ENST00000450491.5 ENST00000471383.5 ENST00000490682.5 |
||
| CDS GCA 90 bp | CGTGCCCAGAAAGTGGACGCACCCAGGGGCTGCTCAGACAGCAGATaGTCCAGAAATGCTAATTCTCTTGCCCACTGGTATTCCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RAQKVDAPRGCSDSR*SRNANSLAHWYSSG Trigger: GCCTGAGGAATACCAGTGGGCAAGAGAATTAGCATTTCTGGAGCATCTGCTGTCTGAGCAGCCCCTGGGTGCGTCCACTTTCTGGGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000264275.9 ENST00000392258.7 ENST00000440732.5 ENST00000450491.5 ENST00000471383.5 ENST00000490682.5 |
||
| CDS CCA 90 bp | ATGGTGAGAATATCATCGCCTCGAGGACATCGCTCTCTCAGGCTCTaGCAAAGTGACTGGATGTACCAGGTTCCCTCTGCAGGGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: MVRISSPRGHRSLRL*QSDWMYQVPSAGFR Trigger: CCGAAACCCTGCAGAGGGAACCTGGTACATCCAGTCACTTTGCCAGAGCCTGAGAGAGCGATGTCCTCGAGGCGATGATATTCTCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392263.6 ENST00000432109.6 ENST00000444430.2 ENST00000673742.1 |
||
| CDS TCA 90 bp | AATATCATCGCCTCGAGGACATCGCTCTCTCAGGCTCTGGCAAAGTaGCTGGATGTACCAGGTTCCCTCTGCAGGGTTTCGGTAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NIIASRTSLSQALAK*LDVPGSLCRVSVGN Trigger: GTTTCCTACCGAAACCCTGCAGAGGGAACCTGGTACATCCAGTCACTTTGCCAGAGCCTGAGAGAGCGATGTCCTCGAGGCGATGATATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392263.6 ENST00000432109.6 ENST00000444430.2 ENST00000673742.1 |
||
| CDS-3UTR CAA 90 bp | CGGAATGTAGTCCAGGCTCAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGAACATCAAGGCATCCTaGATGGGTTCTTGCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNVVQAQELEGGQIFTVQNIKAS*MGSCFL Trigger: AAGGAAGCAAGAACCCATCAAGGATGCCTTGATGTT...CTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGACTACATTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS TCA 90 bp | TGGGTTCTTGCTTCCTTTGCGGAATGTAGTCCAGGCTCAGGAACTTaGGGGAGGCCAGATCTTCACTGTCCAGTTGTTCCCCAATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: WVLASFAECSPGSGT*GRPDLHCPVVPQYH Trigger: ATGATATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392258.7 ENST00000392263.6 ENST00000392266.7 ENST00000413726.5 ENST00000429881.1 ENST00000432109.6 ENST00000437283.5 ENST00000440732.5 ENST00000447616.5 ENST00000471383.5 ENST00000673742.1 |
||
| CDS-3UTR CAA 90 bp | GATGGGTTCTTGCTTCCTTTGCGGAATGTAGTCCAGGCTCAGGAACTTGAGGGATCACTTCCTGTTGAGTaGACTAGCAAATTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DGFLLPLRNVVQAQELEGSLPVE*TSKFSR Trigger: CCTGCTGAATTTGCTAGTCAACTCAACAGGAAGTGA...TCCCTCAAGTTCCTGAGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CAA 90 bp | GATGGGTTCTTGCTTCCTTTGCGGAATGTAGTCCAGGCTCAGGAACTTGAGGGAATCTTCACTGTCCAGTaGTTCCCCAATATCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DGFLLPLRNVVQAQELEGIFTVQ*FPNIIK Trigger: CTTTATGATATTGGGGAACAACTGGACAGTGAAGAT...TCCCTCAAGTTCCTGAGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS TCA 90 bp | TGCCTTATAAAAGAAATCCCAGAGCGCTCCATCACCCTAATTCCATaGGGACACATGGAGAAGATGGCCATTTATGAACCAAGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLIKEIPERSITLIP*GHMEKMAIYEPRSR Trigger: CCTGCTTCTTGGTTCATAAATGGCCATCTTCTCCATGTGTCCTCATGGAATTAGGGTGATGGAGCGCTCTGGGATTTCTTTTATAAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS-3UTR CAA 90 bp | AAAATATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTCCAGGCTCAGGAACTaGAGGGAGGCCAGATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KISSRFMSSSSLHLEISSSRLRN*REARSS Trigger: TGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGA...AGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CAA 90 bp | CATCAAGGCATCCTTGATGGGTTCTTGCTTCCTTTGCGGAATGTAGTCCAGGCTATGTCATCATCCAGTTaGCATTTGGAGATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HQGILDGFLLPLRNVVQAMSSSS*HLEISS Trigger: AGAGGAAATCTCCAAATGCAAACTGGATGATGACAT...AGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCCATCAAGGATGCCTTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAGGCAGGAGAATCACTaGAACCAGGGAGGTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKRQENH*NQGGGG Trigger: GCCTCCACCTCCCTGGTTCAAGTGATTCTCCTGCCT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTCCAGGCTCAGGAACTaGAGGGAGGCCAGATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKSRLRN*REARSS Trigger: TGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGGGGTTCTTGCTTCCTTaGCGGAATGTAGTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKGFLLP*RNVVQA Trigger: AGCCTGGACTACATTCCGCAAAGGAAGCAAGAACCC...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | ATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAAATCCTTGATGGGTTCTaGCTTCCTTTGCGGAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: IQQVHVIIQFAFGDFLLQILDGF*LPLRNV Trigger: TACATTCCGCAAAGGAAGCAAGAACCCATCAAGGAT...TTGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CAA 90 bp | ATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCAATTCAGGAAGGACAGATaGCTTTCCTCCAACATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IQQVHVIIQFAFGDFLLQFRKDR*LSSNIL Trigger: GAGAATGTTGGAGGAAAGCAATCTGTCCTTCCTGAA...TTGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS TCA 90 bp | GAACTGGCATTAATTCTTCTTGAGATGTTTGGAAGAATTCACCTGTaGAGCCATCTGGTCCTGGACTTCTTCGTTTGGGGAACATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ELALILLEMFGRIHL*SHLVLDFFVWGTFL Trigger: CAAAAATGTTCCCCAAACGAAGAAGTCCAGGACCAGATGGCTTCACAGGTGAATTCTTCCAAACATCTCAAGAAGAATTAATGCCAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS-3UTR CAA 90 bp | TATCCAGCAGGTTCATGTCATCATCCAGTTTGCATTTGGAGATTTCCTCTTGCATCATCCAGTTTGCATTaGGAGATTTCCTCTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YPAGSCHHPVCIWRFPLASSSLH*EISSCK Trigger: TTTGCAAGAGGAAATCTCCAAATGCAAACTGGATGA...TGCAAGAGGAAATCTCCAAATGCAAACTGGATGATGACATGAACCTGCTGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGCAGGCTCTTGTTGATTaGGGCACAGACTCTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKQALVD*GTDSFQ Trigger: CTGAAAAGAGTCTGTGCCCAAATCAACAAGAGCCTG...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTTCAGCAGGCTCTTGTaGATTTGGGCACAGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKFSRLL*IWAQTL Trigger: AAGAGTCTGTGCCCAAATCAACAAGAGCCTGCTGAA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGATCTTCAGCAGGCTCTaGTTGATTTGGGCACAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKIFSRL*LIWAQT Trigger: AGTCTGTGCCCAAATCAACAAGAGCCTGCTGAAGAT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTTGGAGAGTCCGAGATaGTCATTACCCCACACAACT | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKLESPR*SLPHTT Trigger: AGTTGTGTGGGGTAATGACAATCTCGGACTCTCCAA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGCACTATCCTGTTCTCTaGGAGAGTCCGAGATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKHYPVL*ESPRLS Trigger: TGACAATCTCGGACTCTCCAAGAGAACAGGATAGTG...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGATCCTTGATGGGTTCTaGCTTCCTTTGCGGAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKILDGF*LPLRNV Trigger: TACATTCCGCAAAGGAAGCAAGAACCCATCAAGGAT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGAACATCAAGGCATCCTaGATGGGTTCTTGCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKNIKAS*MGSCFL Trigger: AAGGAAGCAAGAACCCATCAAGGATGCCTTGATGTT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTTCAGGAAGGACAGATaGCTTTCCTCCAACATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKFRKDR*LSSNIL Trigger: GAGAATGTTGGAGGAAAGCAATCTGTCCTTCCTGAA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS TCA 90 bp | CCATCTGGTCCTGGACTTCTTCGTTTGGGGAACATTTTTGATTATTaGCTAAACCTCCACATTAGTTATAAGTCTGTTCAGACTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PSGPGLLRLGNIFDY*LNLHISYKSVQTLY Trigger: ATACAAAGTCTGAACAGACTTATAACTAATGTGGAGGTTTAGTCAATAATCAAAAATGTTCCCCAAACGAAGAAGTCCAGGACCAGATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGATCTTCACTGTCCAGTaGTTCCCCAATATCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKIFTVQ*FPNIIK Trigger: CTTTATGATATTGGGGAACAACTGGACAGTGAAGAT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGTCATCCAGTTTGCATTaGGAGATTTCCTCTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKSSSLH*EISSCK Trigger: TTTGCAAGAGGAAATCTCCAAATGCAAACTGGATGA...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS-3UTR CAA 90 bp | CGCATAGTGACGAATGATGTAATCAATGGACTTAATCTCTGTGCCTTTTTAAAGATGTCATCATCCAGTTaGCATTTGGAGATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RIVTNDVINGLNLCAFLKMSSSS*HLEISS Trigger: AGAGGAAATCTCCAAATGCAAACTGGATGATGACAT...CTTTAAAAAGGCACAGAGATTAAGTCCATTGATTACATCATTCGTCACTATGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392266.7 |
||
| CDS GCA 72 bp | ACTCAAGGGCTCAGGCGGCCAAGGCCCAACCTCACGTaGCCAGAAAGTGGACGCACCCAGGGGCTGCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TQGLRRPRPNLT*PESGRTQGLLR Trigger: TCTGAGCAGCCCCTGGGTGCGTCCACTTTCTGGGCACGTGAGGTTGGGCCTTGGCCGCCTGAGCCCTTGAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000264275.9 ENST00000392258.7 ENST00000440732.5 ENST00000450491.5 ENST00000471383.5 ENST00000490682.5 |
||
| CDS CCA 72 bp | CAGGCGGCCAAGGCCCAACCTCACGTGCCCAGAAAGTaGACGCACCCAGGGGCTGCTCAGACAGCAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: QAAKAQPHVPRK*THPGAAQTADA Trigger: AGCATCTGCTGTCTGAGCAGCCCCTGGGTGCGTCCACTTTCTGGGCACGTGAGGTTGGGCCTTGGCCGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000264275.9 ENST00000392258.7 ENST00000440732.5 ENST00000450491.5 ENST00000471383.5 ENST00000490682.5 |
||
| CDS CCA 72 bp | CAGGCGGCCAAGGCCCAACCTCACGTGCCCAGAAAGTaGACGCACCCAGGGGCTGCTCCTTCTTCTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QAAKAQPHVPRK*THPGAAPSSEA Trigger: AGCTTCAGAAGAAGGAGCAGCCCCTGGGTGCGTCCACTTTCTGGGCACGTGAGGTTGGGCCTTGGCCGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264274.13 ENST00000392263.6 ENST00000432109.6 |
||
| CDS GCA 72 bp | TTCCTGGCACCATCGCAGTCTCCGAGTCCCCTAACCTaGCTAACTCCACGTGCTCAGCAGGGAAGGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLAPSQSPSPLT*LTPRAQQGRGW Trigger: CCACCCCCTTCCCTGCTGAGCACGTGGAGTTAGGCAGGTTAGGGGACTCGGAGACTGCGATGGTGCCAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358485.8 ENST00000437283.5 |
||
| CDS TCA 72 bp | CTGGTATTCCTCAGGCAGCCACCAGTCACCTTCTTCTaGAGCTGTTGGCGGGGTACAGGCAGGCAGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVFLRQPPVTFF*SCWRGTGRQEA Trigger: AGCTTCCTGCCTGCCTGTACCCCGCCAACAGCTTCAGAAGAAGGTGACTGGTGGCTGCCTGAGGAATACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000264275.9 ENST00000392258.7 ENST00000440732.5 ENST00000450491.5 ENST00000471383.5 ENST00000490682.5 |
||
| CDS TCA 72 bp | CTGCTGAAGTCCATCTCAATATTCCCAAGGTTCAAGTaGCCAACTCAAGGGCTCAGGCGGCCAAGGCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLKSISIFPRFK*PTQGLRRPRPN Trigger: GTTGGGCCTTGGCCGCCTGAGCCCTTGAGTTGGTCACTTGAACCTTGGGAATATTGAGATGGACTTCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432109.6 ENST00000440732.5 |
||
| CDS CCA 72 bp | ATATCATCGCCTCGAGGACATCGCTCTCTCAGGCTCTaGCAAAGTGACTGGATGTACCAGGTTCCCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISSPRGHRSLRL*QSDWMYQVPSA Trigger: TGCAGAGGGAACCTGGTACATCCAGTCACTTTGCCAGAGCCTGAGAGAGCGATGTCCTCGAGGCGATGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392263.6 ENST00000432109.6 ENST00000444430.2 ENST00000673742.1 |
||
| CDS TCA 72 bp | TGGGTTTTCCAGCAAGGGAAGGGCACTTCAAACCAGTaGACTGAGATGTCAGCTCATAGATGGGGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WVFQQGKGTSNQ*TEMSAHRWGPP Trigger: AGGAGGCCCCCATCTATGAGCTGACATCTCAGTTCACTGGTTTGAAGTGCCCTTCCCTTGCTGGAAAACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392263.6 ENST00000432109.6 ENST00000444430.2 ENST00000673742.1 |
||
| CDS CAA 90 bp | GTCCAGGCTCAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGTaGTTCCCCAATATCATAAAGATTTCTGCTGAAGTCCATCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQAQELEGGQIFTVQ*FPNIIKISAEVHPL Trigger: GAGCGGATGGACTTCAGCAGAAATCTTTATGATATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437283.5 |
||
| CDS GCA 72 bp | CACTCTTGCTCTCTTTGGGTTGTCATCTGCATGGAATaGCTCGTTCCATCCCTGACAGGAGGCATCATAGTT | + |
|
Preference number: 6 (lower is better) Translates to: HSCSLWVVICME*LVPSLTGGIIV Trigger: AACTATGATGCCTCCTGTCAGGGATGGAACGAGGCATTCCATGCAGATGACAACCCAAAGAGAGCAAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS TCA 72 bp | ATTCTAATGTTTCTCTCAATATTCCCAAGGTTCAAGTaGCCAACTCAAGGGCTCAGGCGGCCAAGGCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILMFLSIFPRFK*PTQGLRRPRPN Trigger: GTTGGGCCTTGGCCGCCTGAGCCCTTGAGTTGGTCACTTGAACCTTGGGAATATTGAGAGAAACATTAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 90 bp | GTCCAGGCTCAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGTaGTTCCCCAATATCATAAAGATTTCTGCTGAAGTCCATCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VQAQELEGGQIFTVQ*FPNIIKISAEVHLN Trigger: ATTGAGATGGACTTCAGCAGAAATCTTTATGATATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432109.6 ENST00000440732.5 |
||
| CDS CAA 90 bp | GTCCAGGCTCAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGTaGTTCCCCAATATCATAAAGATTTCTGCTGAAGTCCATCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VQAQELEGGQIFTVQ*FPNIIKISAEVHLF Trigger: AAAAAGATGGACTTCAGCAGAAATCTTTATGATATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392258.7 ENST00000392263.6 ENST00000392266.7 ENST00000413726.5 ENST00000429881.1 ENST00000447616.5 ENST00000471383.5 ENST00000673742.1 |
||
| CDS TCA 72 bp | AAAGAAATCCCAGAGCGCTCCATCACCCTAATTCCATaGGGACACATGGAGAAGATGGCCATTTATGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: KEIPERSITLIP*GHMEKMAIYEP Trigger: TGGTTCATAAATGGCCATCTTCTCCATGTGTCCTCATGGAATTAGGGTGATGGAGCGCTCTGGGATTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 72 bp | CAGGAACTTGAGGGAGGCCAGATCTTCACTGTCCAGTaGTTCCCCAATATCATAAAGATTTCTGCTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QELEGGQIFTVQ*FPNIIKISAEV Trigger: GACTTCAGCAGAAATCTTTATGATATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392258.7 ENST00000392263.6 ENST00000392266.7 ENST00000413726.5 ENST00000429881.1 ENST00000432109.6 ENST00000437283.5 ENST00000440732.5 ENST00000447616.5 ENST00000471383.5 ENST00000673742.1 |
||
| CDS CAA 72 bp | GTGATTCACTATCCTGTTCTCTTGGAGAGTCCGAGATaGTCATTACCCCACACAACTCCTCCCCATTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VIHYPVLLESPR*SLPHTTPPHLK Trigger: TTTCAAATGGGGAGGAGTTGTGTGGGGTAATGACAATCTCGGACTCTCCAAGAGAACAGGATAGTGAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339403.6 ENST00000358485.8 ENST00000432109.6 ENST00000673742.1 |
||
| CDS TCA 72 bp | TATGTGTTGGTATTTGGAGATGGGACCTTTGGGAGGTaGTTAGGTCATGAAGGTAGAGCACTTATGAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: YVLVFGDGTFGR*LGHEGRALMNG Trigger: CCCATTCATAAGTGCTCTACCTTCATGACCTAATCACCTCCCAAAGGTCCCATCTCCAAATACCAACACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CCA 72 bp | GCATTTGAGGATAATGTGTGTTCTACTGCTGTAGGGTaGAACGTTCTGTGTATTTCTGTTCGGTCCATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AFEDNVCSTAVG*NVLCISVRSIW Trigger: CCAAATGGACCGAACAGAAATACACAGAACGTTCCACCCTACAGCAGTAGAACACACATTATCCTCAAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 90 bp | GAATTCTTCATAGTCGTTGATTATCTTCAGCAGGCTCTTGTTGATTaGGGCACAGACTCTTTTCAGGATGTCCAACTTTCCTTCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EFFIVVDYLQQALVD*GTDSFQDVQLSFSQ Trigger: CTGGGAGAAGGAAAGTTGGACATCCTGAAAAGAGTCTGTGCCCAAATCAACAAGAGCCTGCTGAAGATAATCAACGACTATGAAGAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392258.7 ENST00000392263.6 ENST00000392266.7 ENST00000413726.5 ENST00000424461.5 ENST00000432109.6 ENST00000444430.2 ENST00000447616.5 ENST00000450491.5 ENST00000471383.5 ENST00000673742.1 |
||
| CDS TCA 72 bp | TTAATTCTTCTTGAGATGTTTGGAAGAATTCACCTGTaGAGCCATCTGGTCCTGGACTTCTTCGTTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LILLEMFGRIHL*SHLVLDFFVWG Trigger: TCCCCAAACGAAGAAGTCCAGGACCAGATGGCTTCACAGGTGAATTCTTCCAAACATCTCAAGAAGAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS GCA 72 bp | GTCCCTAATGCTGTGAAGTTTGGGCACTTTCTCCCGTaGTTTTGCAAAATTGTGATTGTTGATGATCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: VPNAVKFGHFLP*FCKIVIVDDQT Trigger: TGTCTGATCATCAACAATCACAATTTTGCAAAAGCACGGGAGAAAGTGCCCAAACTTCACAGCATTAGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392258.7 ENST00000392263.6 ENST00000392266.7 ENST00000424461.5 ENST00000432109.6 ENST00000450491.5 ENST00000673742.1 |
||
| CDS CAA 72 bp | ATAGTCGTTGATTATCTTCAGCAGGCTCTTGTTGATTaGGGCACAGACTCTTTTCAGGATGTCCAACTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IVVDYLQQALVD*GTDSFQDVQLS Trigger: GGAAAGTTGGACATCCTGAAAAGAGTCTGTGCCCAAATCAACAAGAGCCTGCTGAAGATAATCAACGACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392258.7 ENST00000392263.6 ENST00000392266.7 ENST00000413726.5 ENST00000424461.5 ENST00000432109.6 ENST00000444430.2 ENST00000447616.5 ENST00000450491.5 ENST00000471383.5 ENST00000673742.1 |
||
| CDS CAA 90 bp | GAGGATACAGCAGATGAAGCAGTCCATGTTACTGTGGTCCATGAGTaGGTAGATTTTCAAAATCTCATAGATTTGCTCTACTGTGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EDTADEAVHVTVVHE*VDFQNLIDLLYCAV Trigger: GACTGCACAGTAGAGCAAATCTATGAGATTTTGAAAATCTACCAACTCATGGACCACAGTAACATGGACTGCTTCATCTGCTGTATCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392263.6 ENST00000432109.6 ENST00000444430.2 ENST00000673742.1 |
||
| CDS CCA 72 bp | GGGTGGAACGTTCTGTGTATTTCTGTTCGGTCCATTTaGTCTATAATGTTGTTTAAGTCCCCTGTTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GWNVLCISVRSI*SIMLFKSPVSL Trigger: TAAGGAAACAGGGGACTTAAACAACATTATAGACCAAATGGACCGAACAGAAATACACAGAACGTTCCACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 72 bp | TTTCCCCATCCTAGATATTTAGGTTGTTTGCACATCTaGGCTACTGTAAATAGTGCTGCTATGACCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FPHPRYLGCLHI*ATVNSAAMTMG Trigger: TCCCATGGTCATAGCAGCACTATTTACAGTAGCCAAGATGTGCAAACAACCTAAATATCTAGGATGGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 90 bp | TGTGACTACCACATTTTCTTTCCCCATCCTAGATATTTAGGTTGTTaGCACATCTTGGCTACTGTAAATAGTGCTGCTATGACCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CDYHIFFPHPRYLGC*HILATVNSAAMTMG Trigger: TCCCATGGTCATAGCAGCACTATTTACAGTAGCCAAGATGTGCAAACAACCTAAATATCTAGGATGGGGAAAGAAAATGTGGTAGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 90 bp | AGAAGCAGGCCCTCACTAGATAGCAAATCTGCTAGCTACTTGATCTaGAATTTCCTAGCCTCCAGAACTGTGAAAAATAAATTTCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRPSLDSKSASYLI*NFLASRTVKNKFLC Trigger: ACACAGAAATTTATTTTTCACAGTTCTGGAGGCTAGGAAATTCAAGATCAAGTAGCTAGCAGATTTGCTATCTAGTGAGGGCCTGCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS GCA 72 bp | AGTGACAGATCACAAAGATTTAGACGTCATTCTACTTaGAGCTGGAAGGCAGTGAAAGAATCTCATGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SDRSQRFRRHST*SWKAVKESHEE Trigger: TTCTTCATGAGATTCTTTCACTGCCTTCCAGCTGCAAGTAGAATGACGTCTAAATCTTTGTGATCTGTCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429881.1 |
||
| CDS GCA 72 bp | TGTTTTAGCAGGCTGAATGGACTAAGGCACTGTATATaGATGGATTTATTTCTGAGCTCTCTCTTCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CFSRLNGLRHCI*MDLFLSSLFSS Trigger: AGAAGAGAAGAGAGAGCTCAGAAATAAATCCATGCATATACAGTGCCTTAGTCCATTCAGCCTGCTAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 72 bp | GCAGATGAAGCAGTCCATGTTACTGTGGTCCATGAGTaGGTAGATTTTCAAAATCTCATAGATTTGCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: ADEAVHVTVVHE*VDFQNLIDLLY Trigger: GTAGAGCAAATCTATGAGATTTTGAAAATCTACCAACTCATGGACCACAGTAACATGGACTGCTTCATCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000264274.13 ENST00000264275.9 ENST00000323492.11 ENST00000339403.6 ENST00000358485.8 ENST00000392263.6 ENST00000432109.6 ENST00000444430.2 ENST00000673742.1 |
||
| CDS CAA 90 bp | TTTGCCCTGTTAATAGGCCATTTCGCACTGATTTATTTTTGTATGTaGATCCATACTTGTATCCTAGGGATAAATGCCACTCAGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FALLIGHFALIYFCM*IHTCILGINATQSG Trigger: TCCTGACTGAGTGGCATTTATCCCTAGGATACAAGTATGGATCAACATACAAAAATAAATCAGTGCGAAATGGCCTATTAACAGGGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 72 bp | ATGGCTGGCTATTTCTCCCTTCAGTTCTGTCATTGTTaGTTTCATATATTTAGGTGCTCTGATATTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MAGYFSLQFCHC*FHIFRCSDIEC Trigger: GCACTCAATATCAGAGCACCTAAATATATGAAACAAACAATGACAGAACTGAAGGGAGAAATAGCCAGCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 90 bp | AATAGGCCATTTCGCACTGATTTATTTTTGTATGTTGATCCATACTaGTATCCTAGGGATAAATGCCACTCAGTCAGGATGTACGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: NRPFRTDLFLYVDPY*YPRDKCHSVRMYDH Trigger: ATGATCGTACATCCTGACTGAGTGGCATTTATCCCTAGGATACAAGTATGGATCAACATACAAAAATAAATCAGTGCGAAATGGCCTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CCA 72 bp | AGATCACAAAGATTTAGACGTCATTCTACTTGCAGCTaGAAGGCAGTGAAAGAATCTCATGAAGAAAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: RSQRFRRHSTCS*KAVKESHEEKH Trigger: ATGTTTTTCTTCATGAGATTCTTTCACTGCCTTCCAGCTGCAAGTAGAATGACGTCTAAATCTTTGTGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429881.1 |
||
| CDS CAA 72 bp | TTTCGCACTGATTTATTTTTGTATGTTGATCCATACTaGTATCCTAGGGATAAATGCCACTCAGTCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: FRTDLFLYVDPY*YPRDKCHSVRM Trigger: CATCCTGACTGAGTGGCATTTATCCCTAGGATACAAGTATGGATCAACATACAAAAATAAATCAGTGCGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 90 bp | TGGAACGTTCTGTGTATTTCTGTTCGGTCCATTTGGTCTATAATGTaGTTTAAGTCCCCTGTTTCCTTATTAATCTTCTGTCTGAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: WNVLCISVRSIWSIM*FKSPVSLLIFCLNV Trigger: AACATTCAGACAGAAGATTAATAAGGAAACAGGGGACTTAAACAACATTATAGACCAAATGGACCGAACAGAAATACACAGAACGTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS CAA 72 bp | CTGTGTATTTCTGTTCGGTCCATTTGGTCTATAATGTaGTTTAAGTCCCCTGTTTCCTTATTAATCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCISVRSIWSIM*FKSPVSLLIFC Trigger: ACAGAAGATTAATAAGGAAACAGGGGACTTAAACAACATTATAGACCAAATGGACCGAACAGAAATACACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||
| CDS TCA 72 bp | AAGTATGGTGCTTCTAGCTTTGTTCTTCCTCAAAACTaGTTTAGCTATTTGTGGTCCTTTTTATACTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KYGASSFVLPQN*FSYLWSFLYFR Trigger: TCTGAAGTATAAAAAGGACCACAAATAGCTAAATCAGTTTTGAGGAAGAACAAAGCTAGAAGCACCATACTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490682.5 |
||