Pregenerated sensors for CASP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000137757

Ensembl transcript IDs: ENST00000260315.8, ENST00000393141.6, ENST00000438448.6, ENST00000444749.6, ENST00000456094.1, ENST00000456200.5, ENST00000526056.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	GGGCTGGGCTGCCTGTGGTTTCCTTTCAGATTGTCTGTGAGTCTAATTTCTCATGGGCTGGGCTGCCTGTaGTTTCCTTTCAGATTGTCT	+
Preference number: 4 (lower is better) Translates to: GLGCLWFPFRLSVSLISHGLGCL*FPFRLS Trigger: AGACAATCTGAAAGGAAACCACAGGCAGCCCAGCCC...ATGAGAAATTAGACTCACAGACAATCTGAAAGGAAACCACAGGCAGCCCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438448.6
CDS-3UTR GCA 90 bp	GGGCTGGGCTGCCTGTGGTTTCCTTTCAGATTGTCTGTGAGTCTAATTTCTCATTCTCCTCGTGGATCTTaGAAACAGAATCTGCCTCCA	+
Preference number: 4 (lower is better) Translates to: GLGCLWFPFRLSVSLISHSPRGS*KQNLPP Trigger: TGGAGGCAGATTCTGTTTGCAAGATCCACGAGGAGA...ATGAGAAATTAGACTCACAGACAATCTGAAAGGAAACCACAGGCAGCCCAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438448.6
CDS-3UTR TCA 90 bp	GGGCTGGGCTGCCTGTGGTTTCCTTTCAGATTGTCTGTGAGTCTAATTTCTCATGACCCCATCTTTAGCTaGAATTTTCAATTGCCAGGA	+
Preference number: 4 (lower is better) Translates to: GLGCLWFPFRLSVSLISHDPIFS*NFQLPG Trigger: TCCTGGCAATTGAAAATTTCAGCTAAAGATGGGGTC...ATGAGAAATTAGACTCACAGACAATCTGAAAGGAAACCACAGGCAGCCCAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438448.6
CDS-3UTR TCA 90 bp	GGGCTGGGCTGCCTGTGGTTTCCTTTCAGATTGTCTGTGAGTCTAATTTCTCATCACGTTATGTGGTGTTaGAGAACAGAAAGCAATGAA	+
Preference number: 4 (lower is better) Translates to: GLGCLWFPFRLSVSLISHHVMWC*RTESNE Trigger: TTCATTGCTTTCTGTTCTTCAACACCACATAACGTG...ATGAGAAATTAGACTCACAGACAATCTGAAAGGAAACCACAGGCAGCCCAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438448.6
CDS-3UTR TCA 90 bp	GGGCTGGGCTGCCTGTGGTTTCCTTTCAGATTGTCTGTGAGTCTAATTTCTCATCTGTGGAACTTCAAATaGTTTCTGTACCTTCCGAAA	+
Preference number: 4 (lower is better) Translates to: GLGCLWFPFRLSVSLISHLWNFK*FLYLPK Trigger: TTTCGGAAGGTACAGAAATCATTTGAAGTTCCACAG...ATGAGAAATTAGACTCACAGACAATCTGAAAGGAAACCACAGGCAGCCCAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438448.6
CDS-3UTR CAA 90 bp	GGGCTGGGCTGCCTGTGGTTTCCTTTCAGATTGTCTGTGAGTCTAATTTCTCATTGGTTTCCTTTCAGATaGTCTGTGAGTCTAATTTCT	+
Preference number: 5 (lower is better) Translates to: GLGCLWFPFRLSVSLISHWFPFR*SVSLIS Trigger: AGAAATTAGACTCACAGACAATCTGAAAGGAAACCA...ATGAGAAATTAGACTCACAGACAATCTGAAAGGAAACCACAGGCAGCCCAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438448.6
CDS CAA 90 bp	ACTGGTGATCTTTTGGTCCATATTGAGAAGTGTTTGGGTAAACATTaGATGAGCCACGCGATTCTTTCGCAAAGAGTCTACCAAGATCAG	+
Preference number: 6 (lower is better) Translates to: TGDLLVHIEKCLGKH*MSHAILSQRVYQDQ Trigger: CTGATCTTGGTAGACTCTTTGCGAAAGAATCGCGTGGCTCATCAAATGTTTACCCAAACACTTCTCAATATGGACCAAAAGATCACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000260315.8 ENST00000393141.6 ENST00000444749.6 ENST00000456094.1 ENST00000456200.5 ENST00000526056.5
CDS CAA 72 bp	TACACTGGTGATCTTTTGGTCCATATTGAGAAGTGTTaGGGTAAACATTTGATGAGCCACGCGATTCTTTCG	+
Preference number: 6 (lower is better) Translates to: YTGDLLVHIEKC*GKHLMSHAILS Trigger: CGAAAGAATCGCGTGGCTCATCAAATGTTTACCCAAACACTTCTCAATATGGACCAAAAGATCACCAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000260315.8 ENST00000393141.6 ENST00000444749.6 ENST00000456094.1 ENST00000456200.5 ENST00000526056.5
CDS CAA 90 bp	AAGAGGTTTTACACTGGTGATCTTTTGGTCCATATTGAGAAGTGTTaGGGTAAACATTTGATGAGCCACGCGATTCTTTCGCAAAGAGTC	+
Preference number: 6 (lower is better) Translates to: KRFYTGDLLVHIEKC*GKHLMSHAILSQRV Trigger: GACTCTTTGCGAAAGAATCGCGTGGCTCATCAAATGTTTACCCAAACACTTCTCAATATGGACCAAAAGATCACCAGTGTAAAACCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000260315.8 ENST00000393141.6 ENST00000444749.6 ENST00000456094.1 ENST00000526056.5

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