RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106144

Ensembl transcript IDs: ENST00000310447.10, ENST00000350623.7, ENST00000392925.6, ENST00000472067.1, ENST00000481483.1, ENST00000493642.5, ENST00000619992.4

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAAACGAGCCAAGAGTGTCCTTCCACTGGGTGGCGCTGCAGTACTaGAGGGAACGCACAGGCCGCTTCTGGACACTGCAGCAAGGTGCG +
Preference number: 1 (lower is better)
Translates to: PNEPRVSFHWVALQY*RERTGRFWTLQQGA
Trigger: CGCACCTTGCTGCAGTGTCCAGAAGCGGCCTGTGCGTTCCCTTCAGTACTGCAGCGCCACCCAGTGGAAGGACACTCTTGGCTCGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CCA 90 bp CTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTaGTCAACCCCACGATCAGTCTCATCTCCACGGCAGGCCTGGATG +
Preference number: 1 (lower is better)
Translates to: LSSHPGDPAWFFPSC*STPRSVSSPRQAWM
Trigger: CATCCAGGCCTGCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 90 bp CTCTATCACACCTCCTGTGGTCCAGTGGCTTCCACTTGGCGTGGATaGTGGGGAGGTGACATCATGTGGGAGGGTGTCCTGGGAACAGGT +
Preference number: 1 (lower is better)
Translates to: LYHTSCGPVASTWRG*WGGDIMWEGVLGTG
Trigger: ACCTGTTCCCAGGACACCCTCCCACATGATGTCACCTCCCCATCATCCACGCCAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR GCA 90 bp TGGGAGGGTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTaGAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGCCAG +
Preference number: 1 (lower is better)
Translates to: WEGVLGTGRGGGTEC*SIQTSPCTGGILCQ
Trigger: CTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACACCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CCA 90 bp CTTGGCGTGGATGATGGGGAGGTGACATCATGTGGGAGGGTGTCCTaGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGA +
Preference number: 1 (lower is better)
Translates to: LGVDDGEVTSCGRVS*EQVEVAAQSAAVFR
Trigger: TCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACACCCTCCCACATGATGTCACCTCCCCATCATCCACGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR TCA 90 bp GAAGGGCCCGGGAATTGTCAAGACTTGAGGAAGAAGGACACCACCTaGGTCAAGAGTGGTGGGGGTGGAGAGCTGAGAAGGCCCAGGAAA +
Preference number: 1 (lower is better)
Translates to: EGPGNCQDLRKKDTT*VKSGGGGELRRPRK
Trigger: TTTCCTGGGCCTTCTCAGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCCCGGGCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR TCA 90 bp CATGGCGGCAGTCCCTTTGAGGCAGGCATAGCCGCATATCATGTCTaGGCGCGTGGGCAGTCTCATCTTCGGCAACTTTTCTTTACCGGC +
Preference number: 1 (lower is better)
Translates to: HGGSPFEAGIAAYHV*ARGQSHLRQLFFTG
Trigger: GCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGCCCACGCGCTCAGACATGATATGCGGCTATGCCTGCCTCAAAGGGACTGCCGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR GCA 90 bp ATGTGGGAGGGTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTaGTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGC +
Preference number: 1 (lower is better)
Translates to: MWEGVLGTGRGGGTE*CSIQTSPCTGGILC
Trigger: GCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACACCCTCCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CCA 90 bp GAAAAACCTCTTGGAGCTGGAGCAGTTTCCCATCCACACCATAGATaGCGCCCTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGT +
Preference number: 1 (lower is better)
Translates to: EKPLGAGAVSHPHHR*RPPHHARGVPRCRS
Trigger: ACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATGGGAAACTGCTCCAGCTCCAAGAGGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 90 bp GGTCCACATCCCCTCCAGAGCGAAATTCCAGTTCTTTCTCTCCAGTaGAGTGCACATTGCTCAACACCAGTGCTAGGCCACGAGGCCGAG +
Preference number: 1 (lower is better)
Translates to: GPHPLQSEIPVLSLQ*SAHCSTPVLGHEAE
Trigger: CTCGGCCTCGTGGCCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAAAGAACTGGAATTTCGCTCTGGAGGGGATGTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 90 bp CGCCCTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTaGCTCGGTGTGCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: RPPHHARGVPRCRSP*LGVQVTVQNSAVSL
Trigger: AAGAGAAACTGCAGAATTTTGCACAGTTACCTGCACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR GCA 90 bp GGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTaGACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCCT +
Preference number: 1 (lower is better)
Translates to: GRGGGTECCSIQTSP*TGGILCQEHNLPDP
Trigger: AGGATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 90 bp GAGATTCCCACATCCCTGAGGGGGCAGAACAGAAACCGTGCATCCTaGAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGCTTC +
Preference number: 1 (lower is better)
Translates to: EIPTSLRGQNRNRAS*RSKALSHLLWSSGF
Trigger: GAAGCCACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCCTCAGGGATGTGGGAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR TCA 90 bp CACAGAAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATaGTGGGCACAGGAAACAAGTCTGGGAGATTCCCACATCCCTGAG +
Preference number: 1 (lower is better)
Translates to: HRKGAGLESHTQRQR*WAQETSLGDSHIPE
Trigger: CTCAGGGATGTGGGAATCTCCCAGACTTGTTTCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR TCA 90 bp AGCATGTCGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTaGGCAAGAGCCTCGATGTACCAGGAACCTCGTTTGGTGTTCCGC +
Preference number: 1 (lower is better)
Translates to: SMSATCISQARSENT*ARASMYQEPRLVFR
Trigger: GCGGAACACCAAACGAGGTTCCTGGTACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCGACATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR GCA 90 bp AGTCTGGGAGATTCCCACATCCCTGAGGGGGCAGAACAGAAACCGTaGATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAG +
Preference number: 1 (lower is better)
Translates to: SLGDSHIPEGAEQKP*ILKIKGSITPPVVQ
Trigger: CTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCCTCAGGGATGTGGGAATCTCCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 90 bp TCAATAAGGTACAAATGCAAGGCAATGTTGGCTGACAGGCTGCGGTaGCTTGAGCCCAAACGAGCCAAGAGTGTCCTTCCACTGGGTGGC +
Preference number: 1 (lower is better)
Translates to: SIRYKCKAMLADRLR*LEPKRAKSVLPLGG
Trigger: GCCACCCAGTGGAAGGACACTCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATTTGTACCTTATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 90 bp ACATCCCCTCCAGAGCGAAATTCCAGTTCTTTCTCTCCAGTGAAGTaGACATTGCTCAACACCAGTGCTAGGCCACGAGGCCGAGACTGC +
Preference number: 1 (lower is better)
Translates to: TSPPERNSSSFSPVK*TLLNTSARPRGRDC
Trigger: GCAGTCTCGGCCTCGTGGCCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAAAGAACTGGAATTTCGCTCTGGAGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CCA 90 bp AGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGAAACAAGTCTaGGAGATTCCCACATCCCTGAGGGGGCAGAACAGAAACCGTGCA +
Preference number: 1 (lower is better)
Translates to: SPTLKGRDDGHRKQV*EIPTSLRGQNRNRA
Trigger: TGCACGGTTTCTGTTCTGCCCCCTCAGGGATGTGGGAATCTCCCAGACTTGTTTCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CCA 90 bp TGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTaGCTTCCACTTGGCGTGGATGATGGGGAGGTGACATCATGTGGG +
Preference number: 1 (lower is better)
Translates to: CILKIKGSITPPVVQ*LPLGVDDGEVTSCG
Trigger: CCCACATGATGTCACCTCCCCATCATCCACGCCAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR TCA 90 bp AAGACAAGATGTGGTGACAGACACAGAAGTAGACTGCTCAGGGACTaGAGGGCCCGGGAATTGTCAAGACTTGAGGAAGAAGGACACCAC +
Preference number: 1 (lower is better)
Translates to: KTRCGDRHRSRLLRD*RARELSRLEEEGHH
Trigger: GTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCCCGGGCCCTTCAGTCCCTGAGCAGTCTACTTCTGTGTCTGTCACCACATCTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CCA 90 bp GACAGAGAGGTGGTTACAGAGTCTAGGGAAACACACCATTCTTCCTaGCCTTCTCTGATGCTCCCCACGAGGCTCATTTCAGTAACAAAG +
Preference number: 1 (lower is better)
Translates to: DREVVTESRETHHSS*PSLMLPTRLISVTK
Trigger: CTTTGTTACTGAAATGAGCCTCGTGGGGAGCATCAGAGAAGGCCAGGAAGAATGGTGTGTTTCCCTAGACTCTGTAACCACCTCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR TCA 90 bp CACACTGTGTTTACAACTTCACTTGTCAGGCTCTTCAACTGCAGCTaGAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGG +
Preference number: 1 (lower is better)
Translates to: HTVFTTSLVRLFNCS*NIPGNRSNQGWLYR
Trigger: CCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTCAGCTGCAGTTGAAGAGCCTGACAAGTGAAGTTGTAAACACAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CCA 90 bp ATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTaGAAAGGTTCTCTCTCTCAAATACTTCCATACTATGTCGACCCA +
Preference number: 1 (lower is better)
Translates to: IYLAPDGNTKSWQWE*KGSLSQILPYYVDP
Trigger: TGGGTCGACATAGTATGGAAGTATTTGAGAGAGAGAACCTTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp GCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTGCGCCCTCCACACCATaGGAGAGGAGTGCCACGATG +
Preference number: 2 (lower is better)
Translates to: ATFLYRHHSPRTQGILRGAPSTP*ERSATM
Trigger: CATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGC...ACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CAA 90 bp ACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTaGGTCAACCCCACGATCAGTCTCATCTCCACGGCAGGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: TLLAPRGSCVVLSIL*VNPTISLISTAGLD
Trigger: ATCCAGGCCTGCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CAA 90 bp ATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATCAGTCTCATCTCCACGGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: ITLLAPRGSCVVLSI*LVNPTISLISTAGL
Trigger: CAGGCCTGCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR TCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCCAGGCTGCGGTGCCTTaGGCCCAAACGAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSQAAVP*AQTSQE
Trigger: CTCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTG...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp CTCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGCCACGAGGCCGAGACTaGAACCTATATGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LDVPGTSFGVPHGGSPFEPRGRD*NLYASW
Trigger: CCAGCTGGCATATAGGTTGCAGTCTCGGCCTCGTGG...CTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR GCA 90 bp TCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCAACCATGCGAGAGGAGTaGCACGATGCAGGAGTCCGT +
Preference number: 2 (lower is better)
Translates to: SSHPGDPAWFFPSCWSTPTMREE*HDAGVR
Trigger: ACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGT...TGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR GCA 90 bp CTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCACCATGCGAGAGGAGTaGCACGATGCAGGAGTCCGT +
Preference number: 2 (lower is better)
Translates to: LRQLFFTGITLLAPRGSCTMREE*HDAGVR
Trigger: ACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGT...GCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR TCA 90 bp TGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTTGGCGGCAGTCCCTTTaGGGCAGGCATAGCCGCATA +
Preference number: 2 (lower is better)
Translates to: WRHRVLQYSDISLHRWNSWRQSL*GRHSRI
Trigger: TATGCGGCTATGCCTGCCTCAAAGGGACTGCCGCCA...AGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CCA 90 bp CGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTGAGCAAGAGCCTCGAACCAGGAACCTCGTTTaGTGTTCCGCATGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: RPRAYHKPAQKTLEQEPRTRNLV*CSAWRQ
Trigger: CTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGT...TCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR TCA 90 bp CAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGCGATGCAGGAGTCCGTaGCTCGGTGTGCAGGTAACT +
Preference number: 2 (lower is better)
Translates to: QSHLRQLFFTGITLLAPRRCRSP*LGVQVT
Trigger: AGTTACCTGCACACCGAGTCACGGACTCCTGCATCG...CCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR GCA 90 bp GTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATAGCATGTCGGCCACGTaGATATCACAAGCCCGCTCA +
Preference number: 2 (lower is better)
Translates to: VSWEQVEVAAQSAAVFRHSMSAT*ISQARS
Trigger: TGAGCGGGCTTGTGATATGCACGTGGCCGACATGCT...ATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CCA 90 bp ACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTGAAAAGGAGCTGGCCTaGAGTCCCACACTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: TFLYRHHSPRTQGILRGSEKELA*SPTLKG
Trigger: GCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTTC...AGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR CAA 90 bp CAGCATGTCGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTaGAGCAAGAGCCTCGATGTACCAGGAACCTCGTTTGGTGTTCCG +
Preference number: 2 (lower is better)
Translates to: QHVGHVHITSPLRKH*SKSLDVPGTSFGVP
Trigger: CGGAACACCAAACGAGGTTCCTGGTACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCGACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR GCA 90 bp AGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCAGCATGTCGGCCACGTaGATATCACAAGCCCGCTCA +
Preference number: 2 (lower is better)
Translates to: RHLLAPVEFCARSITFPISMSAT*ISQARS
Trigger: TGAGCGGGCTTGTGATATGCACGTGGCCGACATGCT...GATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCAGGTCCAACCAAGGCTaGCTCTACAGGCAAAGGGCT +
Preference number: 2 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSRSNQG*LYRQRA
Trigger: AGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCT...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAAAATGCAAGGCAATGTTaGCTGACAGGCTGCGGTGCC +
Preference number: 2 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKNARQC*LTGCGA
Trigger: GGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATT...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CAA 90 bp CCTCCAGAGCGAAATTCCAGTTCTTTCTCTCCAGTGAAGTGCACATaGCTCAACACCAGTGCTAGGCCACGAGGCCGAGACTGCAACCTA +
Preference number: 2 (lower is better)
Translates to: PPERNSSSFSPVKCT*LNTSARPRGRDCNL
Trigger: TAGGTTGCAGTCTCGGCCTCGTGGCCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAAAGAACTGGAATTTCGCTCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR TCA 90 bp TCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCAACTCAAAGGCAGAGATaGTGGGCACAGGAAACAAGT +
Preference number: 2 (lower is better)
Translates to: SSHPGDPAWFFPSCWSTPTQRQR*WAQETS
Trigger: ACTTGTTTCCTGTGCCCATCATCTCTGCCTTTGAGT...TGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR-3UTR GCA 90 bp GTTTCCCATCCACACCATAGATGGCGCCCTCCACACCATGCGAGAGGAGTGCCAAGACTGCAACCTATATaGCAGCTGGAAGTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: VSHPHHRWRPPHHARGVPRLQPI*QLEVCL
Trigger: CAAACACACTTCCAGCTGGCATATAGGTTGCAGTCT...TGGCACTCCTCTCGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATGGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTCACAGAAAAGGAGCTaGCCTGGAGTCCCACACTCA +
Preference number: 2 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSSQKRS*PGVPHS
Trigger: TGAGTGTGGGACTCCAGGCCAGCTCCTTTTCTGTGA...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAAACACACCATTCTTCCTaGCCTTCTCTGATGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKTHHSS*PSLMLP
Trigger: GGGGAGCATCAGAGAAGGCCAGGAAGAATGGTGTGT...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTGGTGGGGGTGGAGAGCTACTCAAAGGCAGAGATaGTGGGCACAGGAAACAAGT +
Preference number: 2 (lower is better)
Translates to: RLEEEGHHLSQEWWGWRATQRQR*WAQETS
Trigger: ACTTGTTTCCTGTGCCCATCATCTCTGCCTTTGAGT...AGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp CTCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGTTCTGCAGTTTCTCTTaGATTTCCTGTGCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: LDVPGTSFGVPHGGSPFEFCSFS*ISCAVW
Trigger: CCAGACTGCACAGGAAATGCAAGAGAAACTGCAGAA...CTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR GCA 90 bp ATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGCAGTTCTGCAGTTTCTCTTaGATTTCCTGTGCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: MYQEPRLVFRMAAVPLRQFCSFS*ISCAVW
Trigger: CCAGACTGCACAGGAAATGCAAGAGAAACTGCAGAA...CTGCCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CCA 90 bp ACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGTGACTAGAGTACTGTaGTCCACATCCCCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: TECCSIQTSPCTGGILCQVTRVL*STSPPE
Trigger: CTCTGGAGGGGATGTGGACCACAGTACTCTAGTCAC...CTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTGTGACTAGAGTACTGTaGTCCACATCCCCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLVTRVL*STSPPE
Trigger: CTCTGGAGGGGATGTGGACCACAGTACTCTAGTCAC...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR-3UTR CCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCGTAGGCTTGGGCAGTTaGCGTTGTCAAAGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSVGLGS*RCQRAE
Trigger: TTCAGCTCTTTGACAACGCCAACTGCCCAAGCCTAC...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR CAA 90 bp GACTTCCATGGGCAAAGATCAATAAGGTACAAATGCAAGGCAATGTaGGCTGACAGGCTGCGGTGCCTTGAGCCCAAACGAGCCAAGAGT +
Preference number: 2 (lower is better)
Translates to: DFHGQRSIRYKCKAM*ADRLRCLEPKRAKS
Trigger: ACTCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATTTGTACCTTATTGATCTTTGCCCATGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp GTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCCAACGAAAGATCTTTaGGACTTCCATGGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: VSWEQVEVAAQSAAVFRHPTKDL*DFHGQR
Trigger: TCTTTGCCCATGGAAGTCTCAAAGATCTTTCGTTGG...ATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR-3UTR TCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAACAGCAGCCAACAGGATaGAATGAAGGTAAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKQQPTG*NEGKEG
Trigger: CCCTTCTTTACCTTCATTTCATCCTGTTGGCTGCTG...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp CGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTGAGCAAGAGCCTCGAAGACTGCAACCTATATaGCAGCTGGAAGTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: RPRAYHKPAQKTLEQEPRRLQPI*QLEVCL
Trigger: CAAACACACTTCCAGCTGGCATATAGGTTGCAGTCT...TCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAAGATTCTAGACAGATTTaGTGGCAGCAGCCAACAGGA +
Preference number: 2 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKDSRQI*WQQPTG
Trigger: TCCTGTTGGCTGCTGCCACCAAATCTGTCTAGAATC...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGGTGGCGCTGCAGTACTaGAGGGAACGCACAGGCCGC +
Preference number: 2 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGVALQY*RERTGR
Trigger: GCGGCCTGTGCGTTCCCTTCAGTACTGCAGCGCCAC...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTGGTGGGGGTGGAGAGCTTATGGGGAATTTATATaGCCTCTCCCCATAACCACA +
Preference number: 2 (lower is better)
Translates to: RLEEEGHHLSQEWWGWRAYGEFI*PLPITT
Trigger: TGTGGTTATGGGGAGAGGGCATATAAATTCCCCATA...AGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAACTGAGTCAAGAGTGGTaGGGGTGGAGAGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKLSQEW*GWRAEK
Trigger: CTTCTCAGCTCTCCACCCCCACCACTCTTGACTCAG...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTGGTGGGGGTGGAGAGCTGAAGTGCAGGTTGATTaGATGAAAGTGGGAATAGTA +
Preference number: 2 (lower is better)
Translates to: RLEEEGHHLSQEWWGWRAEVQVD*MKVGIV
Trigger: TACTATTCCCACTTTCATTCAATCAACCTGCACTTC...AGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGCTGACAGGCTGCGGTaGCTTGAGCCCAAACGAGCC +
Preference number: 2 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVADRLR*LEPKRA
Trigger: GGCTCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGC...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAAACACACCATTCTTCCTaGCCTTCTCTGATGCTCCCC +
Preference number: 2 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKTHHSS*PSLMLP
Trigger: GGGGAGCATCAGAGAAGGCCAGGAAGAATGGTGTGT...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAACACAAAATTAGAAGCTaGGAGGAGACCACTCGGGCT +
Preference number: 2 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKHKIRS*EETTRA
Trigger: AGCCCGAGTGGTCTCCTCTCAGCTTCTAATTTTGTG...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATCTATCACACCTCCTGTaGTCCAGTGGCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNLSHLL*SSGFHL
Trigger: CAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAG...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGCAAGAGTGGTGGGGGTaGAGAGCTGAGAAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVQEWWG*RAEKAQ
Trigger: CTGGGCCTTCTCAGCTCTCCACCCCCACCACTCTTG...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAAGGAATTGTCAAGACTTaGGGAAGAAGGACACCACCT +
Preference number: 2 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKGIVKT*GRRTPP
Trigger: AGGTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCC...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTCCACTGGGTGGCGCTaGAGTACTGAAGGGAACGCA +
Preference number: 2 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQSTGWR*STEGNA
Trigger: TGCGTTCCCTTCAGTACTGCAGCGCCACCCAGTGGA...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGCCGGGAGTTGGAGCTTaGAGTGAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQPGVGA*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAAGCTCCAACTCCCGG...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGCCTCCTGTGGTCCAGTaGCTTCCACTTGGCGTGGAT +
Preference number: 2 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGPPVVQ*LPLGVD
Trigger: ATCCACGCCAAGTGGAAGCCACTGGACCACAGGAGG...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGTGTCCTTCCACTGGGTaGCGCTGCAGTACTGAAGGG +
Preference number: 2 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGCPSTG*RCSTEG
Trigger: CCCTTCAGTACTGCAGCGCCACCCAGTGGAAGGACA...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATCTCCTTGCACCGGTaGAATTCTGTGCCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDISLHR*NSVPGA
Trigger: TGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGAT...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR-3UTR CCA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCCTATCACACCTCCTGTaGTCCAGTGGCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLLSHLL*SSGFHL
Trigger: CAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAG...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CAA 90 bp CTCTCTCTCAAATACTTCCATACTATGTCGACCCAAAGGCAGGACTaGGCAGCAAGGCTCACAAACCACCCAAACAAATATTTATTGAGC +
Preference number: 2 (lower is better)
Translates to: LSLKYFHTMSTQRQD*AARLTNHPNKYLLS
Trigger: GCTCAATAAATATTTGTTTGGGTGGTTTGTGAGCCTTGCTGCCAAGTCCTGCCTTTGGGTCGACATAGTATGGAAGTATTTGAGAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACATTCTCTCCAGTGAAGTaGACATTGCTCAACACCAGT +
Preference number: 2 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTFSPVK*TLLNTS
Trigger: ACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAA...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR-3UTR TCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATAGAAACCGTGCATCCTaGAGATCAAAGGCTCTATCA +
Preference number: 2 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDRNRAS*RSKALS
Trigger: TGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCT...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGGACACTGCAGCAAGGTaGGTCTCTAGTCATGTTTGC +
Preference number: 2 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGDTAAR*VSSHVC
Trigger: GCAAACATGACTAGAGACGCACCTTGCTGCAGTGTC...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGCTCTTCAACTGCAGCTaGAACATTCCTGGCAATAGG +
Preference number: 2 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGLFNCS*NIPGNR
Trigger: CCTATTGCCAGGAATGTTTCAGCTGCAGTTGAAGAG...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACGCAGAACAGAAACCGTaGATCCTGAAGATCAAAGGC +
Preference number: 2 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNAEQKP*ILKIKG
Trigger: GCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGC...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGGCAGAACAGAAACCGTaGATCCTGAAGATCAAAGGC +
Preference number: 2 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQAEQKP*ILKIKG
Trigger: GCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGC...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACATCAATAAGGTACAAATaGAAGGCAATGTTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTSIRYK*KAMLAD
Trigger: GTCAGCCAACATTGCCTTGCATTTGTACCTTATTGA...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGACAAAATCCTGGCAGTaGGAGTGGAAAGGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVTKSWQ*EWKGSL
Trigger: GAGAGAACCTTTCCACTCCCACTGCCAGGATTTTGT...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CAA 90 bp TCATGTTTGCTTCTTCAGAGCCAAAAGATAATGTCTACATTAAATTaGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGG +
Preference number: 2 (lower is better)
Translates to: SCLLLQSQKIMSTLN*DTFQTLTLGQKGRR
Trigger: CCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAATGTAGACATTATCTTTTGGCTCTGAAGAAGCAAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR TCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACAGAAACCGTGCATCCTaGAGATCAAAGGCTCTATCA +
Preference number: 2 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNRNRAS*RSKALS
Trigger: TGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCT...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CAA 90 bp CTCATTTCAGTAACAAAGCTCAGAGAAACAACCAACGAAAGATCTTaGAGACTTCCATGGGCAAAGATCAATAAGGTACAAATGCAAGGC +
Preference number: 2 (lower is better)
Translates to: LISVTKLRETTNERS*RLPWAKINKVQMQG
Trigger: GCCTTGCATTTGTACCTTATTGATCTTTGCCCATGGAAGTCTCAAAGATCTTTCGTTGGTTGTTTCTCTGAGCTTTGTTACTGAAATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGAAGCAATCACTAAAGTaGCATCTACAAAAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVKQSLK*HLQKLE
Trigger: TTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTT...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR GCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGAAGCAATCACTAAAGTaGCATCTACAAAAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQKQSLK*HLQKLE
Trigger: TTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTT...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGTCTTTGAGACTTCCATaGGCAAAGATCAATAAGGTA +
Preference number: 2 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGSLRLP*AKINKV
Trigger: TACCTTATTGATCTTTGCCCATGGAAGTCTCAAAGA...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 72 bp ACCATAGATGGCGCCCTCCACACCATGCGAGAGGAGTaGCACGATGCAGGAGTCCGTGACTCGGTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: TIDGALHTMREE*HDAGVRDSVCR
Trigger: CCTGCACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGCCATCTATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 72 bp CCAAGAGTGTCCTTCCACTGGGTGGCGCTGCAGTACTaGAGGGAACGCACAGGCCGCTTCTGGACACTGCAG +
Preference number: 3 (lower is better)
Translates to: PRVSFHWVALQY*RERTGRFWTLQ
Trigger: CTGCAGTGTCCAGAAGCGGCCTGTGCGTTCCCTTCAGTACTGCAGCGCCACCCAGTGGAAGGACACTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 72 bp CAAACGAGCCAAGAGTGTCCTTCCACTGGGTGGCGCTaGAGTACTGAAGGGAACGCACAGGCCGCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: QTSQECPSTGWR*STEGNAQAASG
Trigger: TCCAGAAGCGGCCTGTGCGTTCCCTTCAGTACTGCAGCGCCACCCAGTGGAAGGACACTCTTGGCTCGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CCA 72 bp CTTGGAGCTGGAGCAGTTTCCCATCCACACCATAGATaGCGCCCTCCACACCATGCGAGAGGAGTGCCACGA +
Preference number: 3 (lower is better)
Translates to: LGAGAVSHPHHR*RPPHHARGVPR
Trigger: TCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATGGGAAACTGCTCCAGCTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CCA 72 bp GATGATGGGGAGGTGACATCATGTGGGAGGGTGTCCTaGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: DDGEVTSCGRVS*EQVEVAAQSAA
Trigger: TGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACACCCTCCCACATGATGTCACCTCCCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR-3UTR CAA 90 bp ATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGCAGTCCAGTGGCTTCCACTaGGCGTGGATGATGGGGAGG +
Preference number: 3 (lower is better)
Translates to: MYQEPRLVFRMAAVPLRQSSGFH*AWMMGR
Trigger: CCTCCCCATCATCCACGCCAAGTGGAAGCCACTGGA...CTGCCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR CCA 72 bp CCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTaGTTCTTTCCATCTTGTTGGTCAACCCCACGATCA +
Preference number: 3 (lower is better)
Translates to: PASLSSHPGDPA*FFPSCWSTPRS
Trigger: TGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp CGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTGAGCAAGAGCCTCGATACCAGGAACCTCGTTaGGTGTTCCGCATGGCGGCA +
Preference number: 3 (lower is better)
Translates to: RPRAYHKPAQKTLEQEPRYQEPR*VFRMAA
Trigger: TGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTA...TCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 72 bp GGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATaGTGGGCACAGGAAACAAGTCTGGGAGATTCCCAC +
Preference number: 3 (lower is better)
Translates to: GAGLESHTQRQR*WAQETSLGDSH
Trigger: GTGGGAATCTCCCAGACTTGTTTCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 72 bp TTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTaGGTGGTTCTTTCCATCTTGTTGGTCAACCCCACG +
Preference number: 3 (lower is better)
Translates to: FTGITLLAPRGS*VVLSILLVNPT
Trigger: CGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CCA 72 bp CACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTaGTCAACCCCACGATCAGTCTCATCTCCACGGCAG +
Preference number: 3 (lower is better)
Translates to: HPGDPAWFFPSC*STPRSVSSPRQ
Trigger: CTGCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp GAGGTGACATCATGTGGGAGGGTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGTATTCAGACATCTCCTaGCACCGGTGGAATTCTGTG +
Preference number: 3 (lower is better)
Translates to: EVTSCGRVSWEQVEVAAQYSDIS*HRWNSV
Trigger: CACAGAATTCCACCGGTGCAAGGAGATGTCTGAATA...CTGTGCCGCCACCTCTACCTGTTCCCAGGACACCCTCCCACATGATGTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR TCA 72 bp CACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTaGCTCGGTGTGCAGGTAACTGTGCAAAATTCTGCA +
Preference number: 3 (lower is better)
Translates to: HHARGVPRCRSP*LGVQVTVQNSA
Trigger: TGCAGAATTTTGCACAGTTACCTGCACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR GCA 72 bp GTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTaGAGTATTCAGACATCTCCTTGCACCGGTGGAATT +
Preference number: 3 (lower is better)
Translates to: VLGTGRGGGTEC*SIQTSPCTGGI
Trigger: AATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CCA 72 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTaGTGGGGGTGGAGAGCTGAGAAGGCCCAGGAAAAG +
Preference number: 3 (lower is better)
Translates to: RLEEEGHHLSQE*WGWRAEKAQEK
Trigger: CTTTTCCTGGGCCTTCTCAGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CAA 90 bp CTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATC +
Preference number: 3 (lower is better)
Translates to: LRQLFFTGITLLAPRGSCVVLSI*LVNPTI
Trigger: GATCGTGGGGTTGACCAACAAGATGGAAAGAACCAC...GCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 72 bp ACATCCCTGAGGGGGCAGAACAGAAACCGTGCATCCTaGAGATCAAAGGCTCTATCACACCTCCTGTGGTCC +
Preference number: 3 (lower is better)
Translates to: TSLRGQNRNRAS*RSKALSHLLWS
Trigger: GGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCCTCAGGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR TCA 72 bp GGGAATTGTCAAGACTTGAGGAAGAAGGACACCACCTaGGTCAAGAGTGGTGGGGGTGGAGAGCTGAGAAGG +
Preference number: 3 (lower is better)
Translates to: GNCQDLRKKDTT*VKSGGGGELRR
Trigger: CCTTCTCAGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR TCA 72 bp AGTCCCTTTGAGGCAGGCATAGCCGCATATCATGTCTaGGCGCGTGGGCAGTCTCATCTTCGGCAACTTTTC +
Preference number: 3 (lower is better)
Translates to: SPFEAGIAAYHV*ARGQSHLRQLF
Trigger: GAAAAGTTGCCGAAGATGAGACTGCCCACGCGCTCAGACATGATATGCGGCTATGCCTGCCTCAAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR GCA 72 bp GGAACGCACAGGCCGCTTCTGGACACTGCAGCAAGGTaGGTCTCTAGTCATGTTTGCTTCTTCAGAGCCAAA +
Preference number: 3 (lower is better)
Translates to: GTHRPLLDTAAR*VSSHVCFFRAK
Trigger: TTTGGCTCTGAAGAAGCAAACATGACTAGAGACGCACCTTGCTGCAGTGTCCAGAAGCGGCCTGTGCGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 72 bp TACAAATGCAAGGCAATGTTGGCTGACAGGCTGCGGTaGCTTGAGCCCAAACGAGCCAAGAGTGTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: YKCKAMLADRLR*LEPKRAKSVLP
Trigger: TGGAAGGACACTCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 72 bp GGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTaGACCGGTGGAATTCTGTGCCAGGAGCATAACCTT +
Preference number: 3 (lower is better)
Translates to: GGTECCSIQTSP*TGGILCQEHNL
Trigger: AAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp AGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCCCAGTGAAGTGCACATaGCTCAACACCAGTGCTAGG +
Preference number: 3 (lower is better)
Translates to: RHLLAPVEFCARSITFPIPVKCT*LNTSAR
Trigger: CCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGG...GATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp CGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTCTCATCTCCACGGCGAGCTGAAAAACCTCTaGGAGCTGGAGCAGTTTCCC +
Preference number: 3 (lower is better)
Translates to: RGSFHLVGQPHDQSHLHGELKNL*ELEQFP
Trigger: GGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTC...GCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp CTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTTCTTTCCATCTTGTaGGTCAACCCCACGATCAGT +
Preference number: 3 (lower is better)
Translates to: LRQLFFTGITLLAPRGSCVLSIL*VNPTIS
Trigger: ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAAC...GCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 72 bp GCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTaGGCAAGAGCCTCGATGTACCAGGAACCTCGTTTG +
Preference number: 3 (lower is better)
Translates to: ATCISQARSENT*ARASMYQEPRL
Trigger: CAAACGAGGTTCCTGGTACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR GCA 72 bp GATTCCCACATCCCTGAGGGGGCAGAACAGAAACCGTaGATCCTGAAGATCAAAGGCTCTATCACACCTCCT +
Preference number: 3 (lower is better)
Translates to: DSHIPEGAEQKP*ILKIKGSITPP
Trigger: AGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCCTCAGGGATGTGGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR GCA 72 bp CCAGAGCGAAATTCCAGTTCTTTCTCTCCAGTGAAGTaGACATTGCTCAACACCAGTGCTAGGCCACGAGGC +
Preference number: 3 (lower is better)
Translates to: PERNSSSFSPVK*TLLNTSARPRG
Trigger: GCCTCGTGGCCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAAAGAACTGGAATTTCGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp GCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGTTTGTTCTGTAGGCTaGGGCAGTTGGCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: AVSSSATFLYRHHSPRTQVCSVG*GSWRCQ
Trigger: TTGACAACGCCAACTGCCCAAGCCTACAGAACAAAC...CTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp GCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATC +
Preference number: 3 (lower is better)
Translates to: AAQSAAVFRHLLAPVEFCVVLSI*LVNPTI
Trigger: GATCGTGGGGTTGACCAACAAGATGGAAAGAACCAC...ACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp TCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGTGTTTACAACTTCACTaGTCAGGCTCTTCAACTGCA +
Preference number: 3 (lower is better)
Translates to: SMYQEPRLVFRMAAVPLRCLQLH*SGSSTA
Trigger: TGCAGTTGAAGAGCCTGACAAGTGAAGTTGTAAACA...CCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR-3UTR CAA 90 bp ACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGTTTGTTCTGTAGGCTaGGGCAGTTGGCGTTGTCAA +
Preference number: 3 (lower is better)
Translates to: TECCSIQTSPCTGGILCQVCSVG*GSWRCQ
Trigger: TTGACAACGCCAACTGCCCAAGCCTACAGAACAAAC...CTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR TCA 72 bp TGTGGTGACAGACACAGAAGTAGACTGCTCAGGGACTaGAGGGCCCGGGAATTGTCAAGACTTGAGGAAGAA +
Preference number: 3 (lower is better)
Translates to: CGDRHRSRLLRD*RARELSRLEEE
Trigger: TTCTTCCTCAAGTCTTGACAATTCCCGGGCCCTTCAGTCCCTGAGCAGTCTACTTCTGTGTCTGTCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CAA 90 bp CGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTCTCATCTCCACGGCATTCTGCAGTTTCTCTaGCATTTCCTGTGCAGTCTG +
Preference number: 3 (lower is better)
Translates to: RGSFHLVGQPHDQSHLHGILQFL*HFLCSL
Trigger: CAGACTGCACAGGAAATGCAAGAGAAACTGCAGAAT...GCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR-3UTR CAA 90 bp CAGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATATTCTGCAGTTTCTCTaGCATTTCCTGTGCAGTCTG +
Preference number: 3 (lower is better)
Translates to: QTSPCTGGILCQEHNLPDILQFL*HFLCSL
Trigger: CAGACTGCACAGGAAATGCAAGAGAAACTGCAGAAT...ATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR GCA 72 bp AAAAGACAAGATGTGGTGACAGACACAGAAGTAGACTaGTCAGGGACTGAAGGGCCCGGGAATTGTCAAGAC +
Preference number: 3 (lower is better)
Translates to: KRQDVVTDTEVD*SGTEGPGNCQD
Trigger: GTCTTGACAATTCCCGGGCCCTTCAGTCCCTGAGCAGTCTACTTCTGTGTCTGTCACCACATCTTGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CAA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTCCAGTGGCTTCCACTaGGCGTGGATGATGGGGAGG +
Preference number: 3 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQSSGFH*AWMMGR
Trigger: CCTCCCCATCATCCACGCCAAGTGGAAGCCACTGGA...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CAA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGACAGGCTGCGGTGCCTaGAGCCCAAACGAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQTGCGA*SPNEPR
Trigger: TCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTGT...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CCA 72 bp GCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTaGAAAGGTTCTCTCTCTCAAATACTTCCATACTAT +
Preference number: 3 (lower is better)
Translates to: APDGNTKSWQWE*KGSLSQILPYY
Trigger: ATAGTATGGAAGTATTTGAGAGAGAGAACCTTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR-3UTR CAA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGTTTACAACTTCACTaGTCAGGCTCTTCAACTGCA +
Preference number: 3 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQCLQLH*SGSSTA
Trigger: TGCAGTTGAAGAGCCTGACAAGTGAAGTTGTAAACA...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTCAGTCCCCGGCCCGGTaGGTGCGCAGGCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATFLYRHHSPRTQGILRGQSPAR*VRRRRA
Trigger: AGCTCTGCGCCTGCGCACGCACCGGGCCGGGGACTG...ACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp CCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTGACGCGGACGCACACTaGGCCTGCGCCTGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PRGSCVVLSILLVNPTISDADAH*ACACAL
Trigger: CAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTC...ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp ATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGCAGCGCACAGGCCGCTTCTaGACACTGCAGCAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: MYQEPRLVFRMAAVPLRQRTGRF*TLQQGA
Trigger: CGCACCTTGCTGCAGTGTCCAGAAGCGGCCTGTGCG...CTGCCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp TGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGGCGCTGCAGTACTaGAGGGAACGCACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: WRHRVLQYSDISLHRWNSVALQY*RERTGR
Trigger: GCGGCCTGTGCGTTCCCTTCAGTACTGCAGCGCCAC...AGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp CGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTGAGCAAGAGCCTCGACAGGCTGCGGTGCCTTaGGCCCAAACGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RPRAYHKPAQKTLEQEPRQAAVP*AQTSQE
Trigger: CTCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTG...TCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp TTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCGCGCCCTCCACACCATaGGAGAGGAGTGCCACGATG +
Preference number: 4 (lower is better)
Translates to: FLYRHHSPRTQGILRGSFAPSTP*ERSATM
Trigger: CATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGC...GAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp TTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCGCTGAGGCAGGAGAATaGCGTGAACCCGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FFTGITLLAPRGSCVVLSAEAGE*REPGSW
Trigger: CCAACTCCCGGGTTCACGCCATTCTCCTGCCTCAGC...GGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp TCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACAAGAGTGGTGGGGGTaGAGAGCTGAGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSHPGDPAWFFPSCWSTPQEWWG*RAEKAQ
Trigger: CTGGGCCTTCTCAGCTCTCCACCCCCACCACTCTTG...TGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp CCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTTGGCGGCAGTCCCTTTaGGGCAGGCATAGCCGCATA +
Preference number: 4 (lower is better)
Translates to: PRGSCVVLSILLVNPTISWRQSL*GRHSRI
Trigger: TATGCGGCTATGCCTGCCTCAAAGGGACTGCCGCCA...ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp CTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTGACTCGGTGTGCCGCTCAGAAAACACTTaGGCAAGAGCCTCGATGTAC +
Preference number: 4 (lower is better)
Translates to: LHTMREECHDAGVRDSVCRSENT*ARASMY
Trigger: GTACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCG...GCACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp CCCTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTGACTCGGTGTCGCTCAGAAAACACTTaGGCAAGAGCCTCGATGTAC +
Preference number: 4 (lower is better)
Translates to: PSTPCERSATMQESVTRCRSENT*ARASMY
Trigger: GTACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCG...ACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGCGCCCTCCACACCATaGGAGAGGAGTGCCACGATG +
Preference number: 4 (lower is better)
Translates to: AVSSSATFLYRHHSPRTQAPSTP*ERSATM
Trigger: CATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGC...CTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GATGGGGAGGTGACATCATGTGGGAGGGTGTCCTGGGAACAGGTAGAGGTGGCGAAGGCATCAAAAGCTTaGGGACCCCTCTTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DGEVTSCGRVSWEQVEVAKASKA*GPLLGS
Trigger: GCTGCCTAAGAGGGGTCCCCAAGCTTTTGATGCCTT...CGCCACCTCTACCTGTTCCCAGGACACCCTCCCACATGATGTCACCTCCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTGGTGGGGGTGGAGAGCTTGTGGGAGGGTGTCCTaGGAACAGGTAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RLEEEGHHLSQEWWGWRACGRVS*EQVEVA
Trigger: CGCCACCTCTACCTGTTCCCAGGACACCCTCCCACA...AGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATTGTGGGAGGGTGTCCTaGGAACAGGTAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VSWEQVEVAAQSAAVFRHCGRVS*EQVEVA
Trigger: CGCCACCTCTACCTGTTCCCAGGACACCCTCCCACA...ATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGACAAGAGTGGTGGGGGTaGAGAGCTGAGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGQEWWG*RAEKAQ
Trigger: CTGGGCCTTCTCAGCTCTCCACCCCCACCACTCTTG...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp CTTGATAAGTGCGTTCACCTTAACCAGCATGTCGGCCACGTGCATATCACAAGCGGCCGCGCGGTCCAATaGGGTGAAGTGGGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LDKCVHLNQHVGHVHITSGRAVQ*GEVGCS
Trigger: CGAGCACCCCACTTCACCCCATTGGACCGCGCGGCC...GCTTGTGATATGCACGTGGCCGACATGCTGGTTAAGGTGAACGCACTTATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp TCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACCACTTTGGCCTGGATaGGCTCCCTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSHPGDPAWFFPSCWSTPPLWPG*APSFPR
Trigger: CCTTGGAAATGAGGGAGCTCATCCAGGCCAAAGTGG...TGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp GCGCGTGGGCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCCGATGCAGGAGTCCGTaGCTCGGTGTGCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: ARGQSHLRQLFFTGITLLRCRSP*LGVQVT
Trigger: AGTTACCTGCACACCGAGTCACGGACTCCTGCATCG...GAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGCCCACGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp AACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCGCCGCATATCATGTCTaGGCGCGTGGGCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: NFSLPASLSSHPGDPAWFAAYHV*ARGQSH
Trigger: ATGAGACTGCCCACGCGCTCAGACATGATATGCGGC...GAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp CTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGCTTCCACTTGGCTGGCGGCAGTCCCTTTaGGGCAGGCATAGCCGCATA +
Preference number: 4 (lower is better)
Translates to: LKIKGSITPPVVQWLPLGWRQSL*GRHSRI
Trigger: TATGCGGCTATGCCTGCCTCAAAGGGACTGCCGCCA...GCCAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp CAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGTGGCGGCAGTCCCTTTaGGGCAGGCATAGCCGCATA +
Preference number: 4 (lower is better)
Translates to: QSHLRQLFFTGITLLAPRWRQSL*GRHSRI
Trigger: TATGCGGCTATGCCTGCCTCAAAGGGACTGCCGCCA...CCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp CTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTGACTCGGTGTGCCAGCAGCCAACAGGATaGAATGAAGGTAAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LHTMREECHDAGVRDSVCQQPTG*NEGKEG
Trigger: CCCTTCTTTACCTTCATTTCATCCTGTTGGCTGCTG...GCACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCGAGCTTGCAGTGAGCTaGGATCGTGCCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSELAVS*DRATAL
Trigger: GAGGGCAGTGGCACGATCTCAGCTCACTGCAAGCTC...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp CTCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGAGTTGGAGCTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LDVPGTSFGVPHGGSPFESWSLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAAGCTCCAACT...CTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp TCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGAAGAAGGACACCACCTaGGTCAAGAGTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SMYQEPRLVFRMAAVPLRKKDTT*VKSGGG
Trigger: ACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTT...CCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGAACACTCCCAATATCCTaGGTCCCCTGTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGTLPIS*VPCQRP
Trigger: TGGCCGCTGACAGGGGACGCAGGATATTGGGAGTGT...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCCACTGGGTGGCGCTaGAGTACTGAAGGGAACGCA +
Preference number: 4 (lower is better)
Translates to: RWRHRVLQYSDISLHRWNSTGWR*STEGNA
Trigger: TGCGTTCCCTTCAGTACTGCAGCGCCACCCAGTGGA...ATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp CCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTCATCCACACCATAGATaGCGCCCTCCACACCATGCG +
Preference number: 4 (lower is better)
Translates to: PRGSCVVLSILLVNPTISHPHHR*RPPHHA
Trigger: CGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATG...ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp TCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGTCATGTCTGAGCGCGTaGGCAGTCTCATCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: SMYQEPRLVFRMAAVPLRSCLSA*AVSSSA
Trigger: TGCCGAAGATGAGACTGCCCACGCGCTCAGACATGA...CCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGAACCAGGAACCTCGTTTaGTGTTCCGCATGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGTRNLV*CSAWRQ
Trigger: CTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGT...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCACCAGGAACCTCGTTTaGTGTTCCGCATGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: NFSLPASLSSHPGDPAWFTRNLV*CSAWRQ
Trigger: CTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGT...GAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTGGTGGGGGTGGAGAGCTTGTCCTTCCACTGGGTaGCGCTGCAGTACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RLEEEGHHLSQEWWGWRACPSTG*RCSTEG
Trigger: CCCTTCAGTACTGCAGCGCCACCCAGTGGAAGGACA...AGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp CGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTGAGCAAGAGCCTCGATGTCCTTCCACTGGGTaGCGCTGCAGTACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RPRAYHKPAQKTLEQEPRCPSTG*RCSTEG
Trigger: CCCTTCAGTACTGCAGCGCCACCCAGTGGAAGGACA...TCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR CAA 72 bp AATGCAAGGCAATGTTGGCTGACAGGCTGCGGTGCCTaGAGCCCAAACGAGCCAAGAGTGTCCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: NARQCWLTGCGA*SPNEPRVSFHW
Trigger: CCAGTGGAAGGACACTCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GCGCGTGGGCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCCCACTTTGGCCTGGATaGGCTCCCTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ARGQSHLRQLFFTGITLLPLWPG*APSFPR
Trigger: CCTTGGAAATGAGGGAGCTCATCCAGGCCAAAGTGG...GAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGCCCACGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAAGGTGGGAGTACATGCTaGAGCCCAGAAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKGGSTC*SPERVV
Trigger: CACCACCCTTTCTGGGCTTCAGCATGTACTCCCACC...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR TCA 90 bp AGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCGCCGCATATCATGTCTaGGCGCGTGGGCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: RHLLAPVEFCARSITFPIAAYHV*ARGQSH
Trigger: ATGAGACTGCCCACGCGCTCAGACATGATATGCGGC...GATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp AGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCCACTTGGCGTGGATaGTGGGGAGGTGACATCATG +
Preference number: 4 (lower is better)
Translates to: RWRHRVLQYSDISLHRWNSTWRG*WGGDIM
Trigger: CATGATGTCACCTCCCCATCATCCACGCCAAGTGGA...ATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp CGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTCTCATCTCCACGGCACACTCCCAATATCCTaGGTCCCCTGTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RGSFHLVGQPHDQSHLHGTLPIS*VPCQRP
Trigger: TGGCCGCTGACAGGGGACGCAGGATATTGGGAGTGT...GCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTACACTCCCAATATCCTaGGTCCCCTGTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AAQSAAVFRHLLAPVEFCTLPIS*VPCQRP
Trigger: TGGCCGCTGACAGGGGACGCAGGATATTGGGAGTGT...ACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGACCATGCGAGAGGAGTaGCACGATGCAGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: AVSSSATFLYRHHSPRTQTMREE*HDAGVR
Trigger: ACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGT...CTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATGCACCCAGGGGATCCTaGGTGGTTCTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: RWRHRVLQYSDISLHRWNAPRGS*VVLSIL
Trigger: CAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGC...ATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGCAGGCGGCACAGAGTGCTaGAGTATTCAGACATCTCCT +
Preference number: 4 (lower is better)
Translates to: DVPGTSFGVPHGGSPFEAGGTEC*SIQTSP
Trigger: AGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCC...TGCCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp CTTGATAAGTGCGTTCACCTTAACCAGCATGTCGGCCACGTGCATATCACAAGCGCTGACAGGCTGCGGTaGCTTGAGCCCAAACGAGCC +
Preference number: 4 (lower is better)
Translates to: LDKCVHLNQHVGHVHITSADRLR*LEPKRA
Trigger: GGCTCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGC...GCTTGTGATATGCACGTGGCCGACATGCTGGTTAAGGTGAACGCACTTATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAACCGGGAGTTGGAGCTTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKPGVGA*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAAGCTCCAACTCCCGG...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GCGCGTGGGCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCATCAGCTCCTTGTGCTaGAAGGTGGACCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: ARGQSHLRQLFFTGITLLISSLC*KVDQDP
Trigger: GGGGTCTTGGTCCACCTTCCAGCACAAGGAGCTGAT...GAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGCCCACGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCTGCCCACTTTGGCCTaGATGAGCTCCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VSWEQVEVAAQSAAVFRHLPTLA*MSSLIS
Trigger: GGAAATGAGGGAGCTCATCCAGGCCAAAGTGGGCAG...ATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCCCAGGTGGCCTTGCTTaGTCTCCCTCAGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSPGGLA*SPSVLH
Trigger: GTGAAGCACTGAGGGAGACCAAGCAAGGCCACCTGG...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR CCA 90 bp TCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCAGTGACTAGAGTACTGTaGTCCACATCCCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSHPGDPAWFFPSCWSTPVTRVL*STSPPE
Trigger: CTCTGGAGGGGATGTGGACCACAGTACTCTAGTCAC...TGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCCCAGGGGATCCTGCGTaGTTCTTTCCATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LRQLFFTGITLLAPRGSCPGDPA*FFPSCW
Trigger: CCAACAAGATGGAAAGAACCACGCAGGATCCCCTGG...GCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CTCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGCCAGGGGATCCTGCGTaGTTCTTTCCATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LDVPGTSFGVPHGGSPFEPGDPA*FFPSCW
Trigger: CCAACAAGATGGAAAGAACCACGCAGGATCCCCTGG...CTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp AGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCACCAGGAACCTCGTTTaGTGTTCCGCATGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RHLLAPVEFCARSITFPITRNLV*CSAWRQ
Trigger: CTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGT...GATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTCTCATCTCCACGGCCCTCCTGTGGTCCAGTaGCTTCCACTTGGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: RGSFHLVGQPHDQSHLHGPPVVQ*LPLGVD
Trigger: ATCCACGCCAAGTGGAAGCCACTGGACCACAGGAGG...GCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGAGAAAAGGAGCTGGCCTaGAGTCCCACACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGEKELA*SPTLKG
Trigger: GCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTTC...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTGCTCAACACCAGTGCTAGGCCACGAGGCCGAGACTGCAACCTATATGCCAGCTCACAGAAAAGGAGCTaGCCTGGAGTCCCACACTCA +
Preference number: 4 (lower is better)
Translates to: LLNTSARPRGRDCNLYASSQKRS*PGVPHS
Trigger: TGAGTGTGGGACTCCAGGCCAGCTCCTTTTCTGTGA...GCTGGCATATAGGTTGCAGTCTCGGCCTCGTGGCCTAGCACTGGTGTTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp AGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCCACCTGAGTCAAGAGTaGTGGGGGTGGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RHLLAPVEFCARSITFPIHLSQE*WGWRAE
Trigger: CTCAGCTCTCCACCCCCACCACTCTTGACTCAGGTG...GATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp GTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCCCAAAGGCAGGACTTaGCAGCAAGGCTCACAAACC +
Preference number: 4 (lower is better)
Translates to: VSWEQVEVAAQSAAVFRHPKGRT*QQGSQT
Trigger: GGTTTGTGAGCCTTGCTGCCAAGTCCTGCCTTTGGG...ATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCCCACTTTGGCCTGGATaGGCTCCCTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSPLWPG*APSFPR
Trigger: CCTTGGAAATGAGGGAGCTCATCCAGGCCAAAGTGG...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGAGTTCCACATTCTGGCTaGAACTGCCCACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGVPHSG*NCPLWP
Trigger: AGGCCAAAGTGGGCAGTTTCAGCCAGAATGTGGAAC...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCGTTCCACATTCTGGCTaGAACTGCCCACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NFSLPASLSSHPGDPAWFVPHSG*NCPLWP
Trigger: AGGCCAAAGTGGGCAGTTTCAGCCAGAATGTGGAAC...GAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGCGATGCAGGAGTCCGTaGCTCGGTGTGCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVRCRSP*LGVQVT
Trigger: AGTTACCTGCACACCGAGTCACGGACTCCTGCATCG...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTCCACTTGGCGTGGATaGTGGGGAGGTGACATCATG +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSSTWRG*WGGDIM
Trigger: CATGATGTCACCTCCCCATCATCCACGCCAAGTGGA...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAAGTGGCGCTGCAGTACTaGAGGGAACGCACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKVALQY*RERTGR
Trigger: GCGGCCTGTGCGTTCCCTTCAGTACTGCAGCGCCAC...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp ATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGCAGCACAAAATTAGAAGCTaGGAGGAGACCACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: MYQEPRLVFRMAAVPLRQHKIRS*EETTRA
Trigger: AGCCCGAGTGGTCTCCTCTCAGCTTCTAATTTTGTG...CTGCCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp CTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGCTTCCACTTGGCAAGAAGGACACCACCTaGGTCAAGAGTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LKIKGSITPPVVQWLPLGKKDTT*VKSGGG
Trigger: ACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTT...GCCAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTGGTGGGGGTGGAGAGCTACCGGTGGAATTCTGTaGCAGGAGCATAACCTTCCC +
Preference number: 4 (lower is better)
Translates to: RLEEEGHHLSQEWWGWRATGGIL*QEHNLP
Trigger: GGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGT...AGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATACCGGTGGAATTCTGTaGCAGGAGCATAACCTTCCC +
Preference number: 4 (lower is better)
Translates to: RWRHRVLQYSDISLHRWNTGGIL*QEHNLP
Trigger: GGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGT...ATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp CCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTACCGGTGGAATTCTGTaGCAGGAGCATAACCTTCCC +
Preference number: 4 (lower is better)
Translates to: PRGSCVVLSILLVNPTISTGGIL*QEHNLP
Trigger: GGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGT...ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GTTTCCCATCCACACCATAGATGGCGCCCTCCACACCATGCGAGAGGAGTGCCAATTCAGACATCTCCTTaGACCGGTGGAATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VSHPHHRWRPPHHARGVPIQTSP*TGGILC
Trigger: GCACAGAATTCCACCGGTGCAAGGAGATGTCTGAAT...TGGCACTCCTCTCGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGCTGCCCACTTTGGCCTaGATGAGCTCCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: AVSSSATFLYRHHSPRTQLPTLA*MSSLIS
Trigger: GGAAATGAGGGAGCTCATCCAGGCCAAAGTGGGCAG...CTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GTGTCCTGGGAACAGGTAGAGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATAAGGCATCAAAAGCTTaGGGACCCCTCTTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSWEQVEVAAQSAAVFRHKASKA*GPLLGS
Trigger: GCTGCCTAAGAGGGGTCCCCAAGCTTTTGATGCCTT...ATGTCTGAATACTGCAGCACTCTGTGCCGCCACCTCTACCTGTTCCCAGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGCATCCACACCATAGATaGCGCCCTCCACACCATGCG +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVHPHHR*RPPHHA
Trigger: CGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATG...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCATCTCCTTGCACCGGTaGAATTCTGTGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLYRHHSPRTQGILRGSFISLHR*NSVPGA
Trigger: TGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGAT...GAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGCTTCCACTTGGCGGAGGTGACATCATGTaGGAGGGTGTCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: LKIKGSITPPVVQWLPLGGGDIM*EGVLGT
Trigger: TGTTCCCAGGACACCCTCCCACATGATGTCACCTCC...GCCAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCTATCACACCTCCTGTaGTCCAGTGGCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: FLYRHHSPRTQGILRGSFLSHLL*SSGFHL
Trigger: CAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAG...GAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAACTGAGTCAAGAGTGGTaGGGGTGGAGAGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKLSQEW*GWRAEK
Trigger: CTTCTCAGCTCTCCACCCCCACCACTCTTGACTCAG...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp CCCTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTGACTCGGTGTTTATTTGGCACCCGATaGCAATACAAAATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSTPCERSATMQESVTRCLFGTR*QYKILA
Trigger: TGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAA...ACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTTGGATGATGGGGAGGTaGCATCATGTGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLWMMGR*HHVGGC
Trigger: ACACCCTCCCACATGATGTCACCTCCCCATCATCCA...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AGACTTGAGGAAGAAGGACACCACCTGAGTCAAGAGTGGTGGGGGTGGAGAGCTCACAAAATTAGAAGCTaGGAGGAGACCACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RLEEEGHHLSQEWWGWRAHKIRS*EETTRA
Trigger: AGCCCGAGTGGTCTCCTCTCAGCTTCTAATTTTGTG...AGCTCTCCACCCCCACCACTCTTGACTCAGGTGGTGTCCTTCTTCCTCAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp CTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGATGATGAGGATGCATaGCACACACTCCCAATATCC +
Preference number: 4 (lower is better)
Translates to: LRQLFFTGITLLAPRGSCDDEDA*HTLPIS
Trigger: GGATATTGGGAGTGTGTGGCATGCATCCTCATCATC...GCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp AGCTTGAAGAGGGTGACTAGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATAGCATGTCGGCCACGTaGATATCACAAGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SLKRVTRVLWSTSPPERNSMSAT*ISQARS
Trigger: TGAGCGGGCTTGTGATATGCACGTGGCCGACATGCT...ATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTCTTCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp CAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGTGGCGGCACAGAGTaGTGCAGTATTCAGACATCT +
Preference number: 4 (lower is better)
Translates to: QSHLRQLFFTGITLLAPRGGGTE*CSIQTS
Trigger: AGATGTCTGAATACTGCAGCACTCTGTGCCGCCACC...CCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp TTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCAGGAGTTCCACATTCTaGCTGAAACTGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FFTGITLLAPRGSCVVLSRSSTF*LKLPTL
Trigger: CAAAGTGGGCAGTTTCAGCCAGAATGTGGAACTCCT...GGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGTCACAGCTCAACGGTaGGAGTACATGCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVVTAQR*EYMLKP
Trigger: GGGCTTCAGCATGTACTCCCACCGTTGAGCTGTGAC...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR CCA 90 bp TCTCTTGCATTTCCTGTGCAGTCTGGTCACATAGAACATGGACGTCATAGCCCATGTGGGAGGGTGTCCTaGGAACAGGTAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLAFPVQSGHIEHGRHSPCGRVS*EQVEVA
Trigger: CGCCACCTCTACCTGTTCCCAGGACACCCTCCCACA...TGGGCTATGACGTCCATGTTCTATGTGACCAGACTGCACAGGAAATGCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGAGGTCCAACCAAGGCTaGCTCTACAGGCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVRSNQG*LYRQRA
Trigger: AGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCT...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTAATGCAAGGCAATGTTaGCTGACAGGCTGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLNARQC*LTGCGA
Trigger: GGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATT...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AGCTTGAAGAGGGTGACTAGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATAATGCAAGGCAATGTTaGCTGACAGGCTGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLKRVTRVLWSTSPPERNNARQC*LTGCGA
Trigger: GGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATT...ATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTCTTCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp ACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGCTGAGTCAAGAGTGGTaGGGGTGGAGAGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TECCSIQTSPCTGGILCQLSQEW*GWRAEK
Trigger: CTTCTCAGCTCTCCACCCCCACCACTCTTGACTCAG...CTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR CAA 72 bp CGAAATTCCAGTTCTTTCTCTCCAGTGAAGTGCACATaGCTCAACACCAGTGCTAGGCCACGAGGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: RNSSSFSPVKCT*LNTSARPRGRD
Trigger: GTCTCGGCCTCGTGGCCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAAAGAACTGGAATTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
3UTR CAA 72 bp GGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTaGAGCAAGAGCCTCGATGTACCAGGAACCTCGTTT +
Preference number: 4 (lower is better)
Translates to: GHVHITSPLRKH*SKSLDVPGTSF
Trigger: AAACGAGGTTCCTGGTACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR TCA 90 bp CGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTGAGCAAGAGCCTCGAACTCAAAGGCAGAGATaGTGGGCACAGGAAACAAGT +
Preference number: 4 (lower is better)
Translates to: RPRAYHKPAQKTLEQEPRTQRQR*WAQETS
Trigger: ACTTGTTTCCTGTGCCCATCATCTCTGCCTTTGAGT...TCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp TTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCAGACTGCAACCTATATaGCAGCTGGAAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FFTGITLLAPRGSCVVLSRLQPI*QLEVCL
Trigger: CAAACACACTTCCAGCTGGCATATAGGTTGCAGTCT...GGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp TCTCTTGCATTTCCTGTGCAGTCTGGTCACATAGAACATGGACGTCATAGCCCACCACGAGGCCGAGACTaGAACCTATATGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLAFPVQSGHIEHGRHSPPRGRD*NLYASW
Trigger: CCAGCTGGCATATAGGTTGCAGTCTCGGCCTCGTGG...TGGGCTATGACGTCCATGTTCTATGTGACCAGACTGCACAGGAAATGCAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp TCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACCGATCCTTGATAAGTaGGTTCACCTTAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SSHPGDPAWFFPSCWSTPPILDK*VHLNQH
Trigger: ATGCTGGTTAAGGTGAACGCACTTATCAAGGATCGG...TGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTGGCGGCACAGAGTGCTaGAGTATTCAGACATCTCCT +
Preference number: 4 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLGGTEC*SIQTSP
Trigger: AGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCC...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTGGTGGCGGCACAGAGTaGTGCAGTATTCAGACATCT +
Preference number: 4 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLGGGTE*CSIQTS
Trigger: AGATGTCTGAATACTGCAGCACTCTGTGCCGCCACC...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGACACTGCAGCAAGGTaGGTCTCTAGTCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: SLIFGNFSLPASLSSHPGDTAAR*VSSHVC
Trigger: GCAAACATGACTAGAGACGCACCTTGCTGCAGTGTC...CCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAGCTGACAGGCTGCGGTaGCTTGAGCCCAAACGAGCC +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTADRLR*LEPKRA
Trigger: GGCTCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGC...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp CTTGATAAGTGCGTTCACCTTAACCAGCATGTCGGCCACGTGCATATCACAAGCATCAGCTCCTTGTGCTaGAAGGTGGACCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: LDKCVHLNQHVGHVHITSISSLC*KVDQDP
Trigger: GGGGTCTTGGTCCACCTTCCAGCACAAGGAGCTGAT...GCTTGTGATATGCACGTGGCCGACATGCTGGTTAAGGTGAACGCACTTATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTAGGAGTTCCACATTCTaGCTGAAACTGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: PRGSCVVLSILLVNPTISRSSTF*LKLPTL
Trigger: CAAAGTGGGCAGTTTCAGCCAGAATGTGGAACTCCT...ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGAAGGCATCAAAAGCTTaGGGACCCCTCTTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVKASKA*GPLLGS
Trigger: GCTGCCTAAGAGGGGTCCCCAAGCTTTTGATGCCTT...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTATTTCCTGTGCAGTCTaGTCACATAGAACATGGACG +
Preference number: 4 (lower is better)
Translates to: ATFLYRHHSPRTQGILRGISCAV*SHRTWT
Trigger: CGTCCATGTTCTATGTGACCAGACTGCACAGGAAAT...ACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CTCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGATTTCCTGTGCAGTCTaGTCACATAGAACATGGACG +
Preference number: 4 (lower is better)
Translates to: LDVPGTSFGVPHGGSPFEISCAV*SHRTWT
Trigger: CGTCCATGTTCTATGTGACCAGACTGCACAGGAAAT...CTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp AGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGTAGGCTTGGGCAGTTaGCGTTGTCAAAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SLIFGNFSLPASLSSHPGVGLGS*RCQRAE
Trigger: TTCAGCTCTTTGACAACGCCAACTGCCCAAGCCTAC...CCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp AGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTCCAGTTCTTTCTCTCCATCATGTCTGAGCGCGTaGGCAGTCTCATCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: RVLWSTSPPERNSSSFSPSCLSA*AVSSSA
Trigger: TGCCGAAGATGAGACTGCCCACGCGCTCAGACATGA...TGGAGAGAAAGAACTGGAATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTTCACAGAAAAGGAGCTaGCCTGGAGTCCCACACTCA +
Preference number: 4 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLSQKRS*PGVPHS
Trigger: TGAGTGTGGGACTCCAGGCCAGCTCCTTTTCTGTGA...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGAAGAAACCGTGCATCCTaGAGATCAAAGGCTCTATCA +
Preference number: 4 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGRNRAS*RSKALS
Trigger: TGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCT...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp TGTCTGAGCGCGTGGGCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCCCGGCTAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CLSAWAVSSSATFLYRHHSRLTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTAGCCGGGA...GTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGCCCACGCGCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp CAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGACCATGGGAGATGTaGAGGAAGTTATCTCACACA +
Preference number: 4 (lower is better)
Translates to: QSHLRQLFFTGITLLAPRGPWEM*RKLSHT
Trigger: TGTGTGAGATAACTTCCTTCACATCTCCCATGGTCC...CCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGCGCGGTCCAATGGGGTaGAGTGGGGTGCTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQRGPMG*SGVLGG
Trigger: TCCGCCGAGCACCCCACTTCACCCCATTGGACCGCG...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATGCGCCCTCCACACCATaGGAGAGGAGTGCCACGATG +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDAPSTP*ERSATM
Trigger: CATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGC...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp CCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTCCGATCCTTGATAAGTaGGTTCACCTTAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PRGSCVVLSILLVNPTISPILDK*VHLNQH
Trigger: ATGCTGGTTAAGGTGAACGCACTTATCAAGGATCGG...ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp AGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCGCAGAACAGAAACCGTaGATCCTGAAGATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RHLLAPVEFCARSITFPIAEQKP*ILKIKG
Trigger: GCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGC...GATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGACACTGCAGCAAGGTaGGTCTCTAGTCATGTTTGC +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVDTAAR*VSSHVC
Trigger: GCAAACATGACTAGAGACGCACCTTGCTGCAGTGTC...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTGATAAAATTCAGGAGTaGAAGGCTTCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ATFLYRHHSPRTQGILRGDKIQE*KASQKA
Trigger: TGCCTTCTGTGAAGCCTTGCACTCCTGAATTTTATC...ACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp TCTCTGATGCTCCCCACGAGGCTCATTTCAGTAACAAAGCTCAGAGAAACAACCCTGCCCACTTTGGCCTaGATGAGCTCCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SLMLPTRLISVTKLRETTLPTLA*MSSLIS
Trigger: GGAAATGAGGGAGCTCATCCAGGCCAAAGTGGGCAG...GGTTGTTTCTCTGAGCTTTGTTACTGAAATGAGCCTCGTGGGGAGCATCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp CGGCCACGTGCATATCACAAGCCCGCTCAGAAAACACTTGAGCAAGAGCCTCGATTCTTTCCATCTTGTTaGTCAACCCCACGATCAGTC +
Preference number: 4 (lower is better)
Translates to: RPRAYHKPAQKTLEQEPRFFPSC*STPRSV
Trigger: GACTGATCGTGGGGTTGACCAACAAGATGGAAAGAA...TCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGGGCTTGTGATATGCACGTGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CTTGATAAGTGCGTTCACCTTAACCAGCATGTCGGCCACGTGCATATCACAAGCATCTCCTTGCACCGGTaGAATTCTGTGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LDKCVHLNQHVGHVHITSISLHR*NSVPGA
Trigger: TGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGAT...GCTTGTGATATGCACGTGGCCGACATGCTGGTTAAGGTGAACGCACTTATCAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATCGCACAGGCCGCTTCTaGACACTGCAGCAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDRTGRF*TLQQGA
Trigger: CGCACCTTGCTGCAGTGTCCAGAAGCGGCCTGTGCG...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp CTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGCTTCCACTTGGCGATTCTAGACAGATTTaGTGGCAGCAGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: LKIKGSITPPVVQWLPLGDSRQI*WQQPTG
Trigger: TCCTGTTGGCTGCTGCCACCAAATCTGTCTAGAATC...GCCAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCGATTCTAGACAGATTTaGTGGCAGCAGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSDSRQI*WQQPTG
Trigger: TCCTGTTGGCTGCTGCCACCAAATCTGTCTAGAATC...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp CGTTGTCAAAGAGCTGAAAAACCTCTTGGAGCTGGAGCAGTTTCCCATCCACACGGAGACCACTCGGGCTaGAGCTTAGCAAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: RCQRAEKPLGAGAVSHPHGDHSG*SLARNH
Trigger: GTGATTTCTTGCTAAGCTCCAGCCCGAGTGGTCTCC...GTGTGGATGGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTCTTTGACAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp CGTGGTTCTTTCCATCTTGTTGGTCAACCCCACGATCAGTCTCATCTCCACGGCACAAAATCCTGGCAGTaGGAGTGGAAAGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RGSFHLVGQPHDQSHLHGTKSWQ*EWKGSL
Trigger: GAGAGAACCTTTCCACTCCCACTGCCAGGATTTTGT...GCCGTGGAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp CAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGCAATACAAAATCCTaGCAGTGGGAGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: QSHLRQLFFTGITLLAPRGNTKS*QWEWKG
Trigger: ACCTTTCCACTCCCACTGCCAGGATTTTGTATTGCC...CCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619992.4
3UTR CAA 72 bp GGGCAAAGATCAATAAGGTACAAATGCAAGGCAATGTaGGCTGACAGGCTGCGGTGCCTTGAGCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: GQRSIRYKCKAM*ADRLRCLEPKR
Trigger: TCGTTTGGGCTCAAGGCACCGCAGCCTGTCAGCCAACATTGCCTTGCATTTGTACCTTATTGATCTTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAAGCCCAGAAAGGGTGGTaGGCAACATATCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKAQKGW*ATYPPG
Trigger: ACCTGGAGGATATGTTGCTCACCACCCTTTCTGGGC...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR TCA 90 bp TCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGGAAGTGCAGGTTGATTaGATGAAAGTGGGAATAGTA +
Preference number: 4 (lower is better)
Translates to: SMYQEPRLVFRMAAVPLREVQVD*MKVGIV
Trigger: TACTATTCCCACTTTCATTCAATCAACCTGCACTTC...CCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATTCCTCCAGGTGGCCTTaGTTGGTCTCCCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNSSRWP*LVSLSA
Trigger: AGCACTGAGGGAGACCAAGCAAGGCCACCTGGAGGA...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR GCA 90 bp GCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGTTCTCTCCAGTGAAGTaGACATTGCTCAACACCAGT +
Preference number: 4 (lower is better)
Translates to: AVSSSATFLYRHHSPRTQFSPVK*TLLNTS
Trigger: ACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAA...CTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GTGCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTGTGCAGTCTACCATGCGAGAGGAGTaGCACGATGCAGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: VQVTVQNSAVSLAFPVQSTMREE*HDAGVR
Trigger: ACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGT...AGACTGCACAGGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTGTGCAGTCTGGAGCATGTCGGCCACGTaGATATCACAAGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AGNCAKFCSFSCISCAVWSMSAT*ISQARS
Trigger: TGAGCGGGCTTGTGATATGCACGTGGCCGACATGCT...CCAGACTGCACAGGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGATTCAGACATCTCCTTaGACCGGTGGAATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVIQTSP*TGGILC
Trigger: GCACAGAATTCCACCGGTGCAAGGAGATGTCTGAAT...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATCCGGGAGTTGGAGCTTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNPGVGA*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAAGCTCCAACTCCCGG...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTTCAACAACAGCTGTTTaGCTAGCACCACTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLSTTAV*LAPLGS
Trigger: AGAACCGAGTGGTGCTAGCCAAACAGCTGTTGTTGA...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AGCTTGAAGAGGGTGACTAGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTCAACAACAGCTGTTTaGCTAGCACCACTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKRVTRVLWSTSPPERNSTTAV*LAPLGS
Trigger: AGAACCGAGTGGTGCTAGCCAAACAGCTGTTGTTGA...ATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTCTTCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp CTTGATAAGTGCGTTCACCTTAACCAGCATGTCGGCCACGTGCATATCACAAGCGTAGGCTTGGGCAGTTaGCGTTGTCAAAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LDKCVHLNQHVGHVHITSVGLGS*RCQRAE
Trigger: TTCAGCTCTTTGACAACGCCAACTGCCCAAGCCTAC...GCTTGTGATATGCACGTGGCCGACATGCTGGTTAAGGTGAACGCACTTATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATCCTCCTGTGGTCCAGTaGCTTCCACTTGGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNPPVVQ*LPLGVD
Trigger: ATCCACGCCAAGTGGAAGCCACTGGACCACAGGAGG...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAGTGCAAGGCTTCACCTaGAGGCAGACAGGACCATCT +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTVQGFT*RQTGPS
Trigger: AGATGGTCCTGTCTGCCTTCAGGTGAAGCCTTGCAC...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR TCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATTGGATGATGGGGAGGTaGCATCATGTGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNWMMGR*HHVGGC
Trigger: ACACCCTCCCACATGATGTCACCTCCCCATCATCCA...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGCAGGCTGCGGTGCCTTaGGCCCAAACGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGQAAVP*AQTSQE
Trigger: CTCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTG...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAAGTTGGAGCTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTSWSLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAAGCTCCAACT...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTAAGTTATCTCACACATaGTATGTCTTCAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: ATFLYRHHSPRTQGILRGKLSHT*YVFKEL
Trigger: TAGCTCCTTGAAGACATATCATGTGTGAGATAACTT...ACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATACCATGCGAGAGGAGTaGCACGATGCAGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDTMREE*HDAGVR
Trigger: ACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGT...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GTGCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTGTGCAGTCTGCACCCAGGGGATCCTaGGTGGTTCTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: VQVTVQNSAVSLAFPVQSAPRGS*VVLSIL
Trigger: CAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGC...AGACTGCACAGGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTATGGGGAATTTATATaGCCTCTCCCCATAACCACA +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSYGEFI*PLPITT
Trigger: TGTGGTTATGGGGAGAGGGCATATAAATTCCCCATA...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAAGTGACTAGAGTACTGTaGTCCACATCCCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKVTRVL*STSPPE
Trigger: CTCTGGAGGGGATGTGGACCACAGTACTCTAGTCAC...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAAATCTCCTTGCACCGGTaGAATTCTGTGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKISLHR*NSVPGA
Trigger: TGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGAT...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAGAAAAGGAGCTGGCCTaGAGTCCCACACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTEKELA*SPTLKG
Trigger: GCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTTC...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TGCTCAACACCAGTGCTAGGCCACGAGGCCGAGACTGCAACCTATATGCCAGCTTCTTTGAGACTTCCATaGGCAAAGATCAATAAGGTA +
Preference number: 4 (lower is better)
Translates to: CSTPVLGHEAETATYMPASLRLP*AKINKV
Trigger: TACCTTATTGATCTTTGCCCATGGAAGTCTCAAAGA...AGCTGGCATATAGGTTGCAGTCTCGGCCTCGTGGCCTAGCACTGGTGTTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp GCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTGTGCAGTCTGGACACACCATTCTTCCTaGCCTTCTCTGATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGNCAKFCSFSCISCAVWTHHSS*PSLMLP
Trigger: GGGGAGCATCAGAGAAGGCCAGGAAGAATGGTGTGT...CCAGACTGCACAGGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp CTTGATAAGTGCGTTCACCTTAACCAGCATGTCGGCCACGTGCATATCACAAGCAGAAACCGTGCATCCTaGAGATCAAAGGCTCTATCA +
Preference number: 4 (lower is better)
Translates to: LDKCVHLNQHVGHVHITSRNRAS*RSKALS
Trigger: TGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCT...GCTTGTGATATGCACGTGGCCGACATGCTGGTTAAGGTGAACGCACTTATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAAGAAGTGCAGGTTGATTaGATGAAAGTGGGAATAGTA +
Preference number: 4 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKEVQVD*MKVGIV
Trigger: TACTATTCCCACTTTCATTCAATCAACCTGCACTTC...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGGAGCTTGCAGTGAGCTaGGATCGTGCCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQELAVS*DRATAL
Trigger: GAGGGCAGTGGCACGATCTCAGCTCACTGCAAGCTC...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp TCTCTGATGCTCCCCACGAGGCTCATTTCAGTAACAAAGCTCAGAGAAACAACCTCCCGGCTAACATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SLMLPTRLISVTKLRETTSRLTW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATGTTAGCCGGGA...GGTTGTTTCTCTGAGCTTTGTTACTGAAATGAGCCTCGTGGGGAGCATCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATGGCGGCACAGAGTGCTaGAGTATTCAGACATCTCCT +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNGGTEC*SIQTSP
Trigger: AGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCC...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp TCTCTGATGCTCCCCACGAGGCTCATTTCAGTAACAAAGCTCAGAGAAACAACCGCAGAACAGAAACCGTaGATCCTGAAGATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLMLPTRLISVTKLRETTAEQKP*ILKIKG
Trigger: GCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGC...GGTTGTTTCTCTGAGCTTTGTTACTGAAATGAGCCTCGTGGGGAGCATCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGCTTGAAGAGGGTGACTAGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTATGGGGAATTTATATaGCCTCTCCCCATAACCACA +
Preference number: 4 (lower is better)
Translates to: SLKRVTRVLWSTSPPERNYGEFI*PLPITT
Trigger: TGTGGTTATGGGGAGAGGGCATATAAATTCCCCATA...ATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTCTTCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGTGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATAAGCAATCACTAAAGTaGCATCTACAAAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RWRHRVLQYSDISLHRWNKQSLK*HLQKLE
Trigger: TTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTT...ATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCTCCACTGGGTGGCGCTaGAGTACTGAAGGGAACGCA +
Preference number: 4 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLSTGWR*STEGNA
Trigger: TGCGTTCCCTTCAGTACTGCAGCGCCACCCAGTGGA...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTCAATAAGGTACAAATaGAAGGCAATGTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSSIRYK*KAMLAD
Trigger: GTCAGCCAACATTGCCTTGCATTTGTACCTTATTGA...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGAACAAACAAGGTTTCTaGCCTCATTTACAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVNKQGF*PHLQPG
Trigger: ACCAGGCTGTAAATGAGGGCAGAAACCTTGTTTGTT...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAAACATATCCTCCAGGTaGCCTTGCTTGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTNISSR*PCLVSL
Trigger: GAGGGAGACCAAGCAAGGCCACCTGGAGGATATGTT...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR CCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAACACACCATTCTTCCTaGCCTTCTCTGATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTTHHSS*PSLMLP
Trigger: GGGGAGCATCAGAGAAGGCCAGGAAGAATGGTGTGT...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGCTGAGGCAGGAGAATaGCGTGAACCCGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVAEAGE*REPGSW
Trigger: CCAACTCCCGGGTTCACGCCATTCTCCTGCCTCAGC...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTATGTGCCAAGCACTTaGTACATGATGGTGAATAAA +
Preference number: 4 (lower is better)
Translates to: NFSLPASLSSHPGDPAWFYVPST*YMMVNK
Trigger: TTTATTCACCATCATGTACCAAGTGCTTGGCACATA...GAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATCCCAAAGGCAGGACTTaGCAGCAAGGCTCACAAACC +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDPKGRT*QQGSQT
Trigger: GGTTTGTGAGCCTTGCTGCCAAGTCCTGCCTTTGGG...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACCGATGCAGGAGTCCGTaGCTCGGTGTGCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNRCRSP*LGVQVT
Trigger: AGTTACCTGCACACCGAGTCACGGACTCCTGCATCG...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGCCGCATATCATGTCTaGGCGCGTGGGCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVAAYHV*ARGQSH
Trigger: ATGAGACTGCCCACGCGCTCAGACATGATATGCGGC...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GTTGGCGTTGTCAAAGAGCTGAAAAACCTCTTGGAGCTGGAGCAGTTTCCCATCAACTACTCTGTTATGTaGGAACAGACTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VGVVKELKNLLELEQFPINYSVM*EQTGGR
Trigger: TCTTCCTCCAGTCTGTTCTCACATAACAGAGTAGTT...GATGGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTCTTTGACAACGCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR TCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGAGACTGCTCAGGGACTaGAGGGCCCGGGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQRLLRD*RARELS
Trigger: TGACAATTCCCGGGCCCTTCAGTCCCTGAGCAGTCT...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGAGACTGCTCAGGGACTaGAGGGCCCGGGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGRLLRD*RARELS
Trigger: TGACAATTCCCGGGCCCTTCAGTCCCTGAGCAGTCT...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCAAGTTATCTCACACATaGTATGTCTTCAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSKLSHT*YVFKEL
Trigger: TAGCTCCTTGAAGACATATCATGTGTGAGATAACTT...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GCGAAATTCCAGTTCTTTCTCTCCAGTGAAGTGCACATTGCTCAACACCAGTGCAGACTGCAACCTATATaGCAGCTGGAAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: AKFQFFLSSEVHIAQHQCRLQPI*QLEVCL
Trigger: CAAACACACTTCCAGCTGGCATATAGGTTGCAGTCT...GCACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAAAGAACTGGAATTTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGCCACGAGGCCGAGACTaGAACCTATATGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVPRGRD*NLYASW
Trigger: CCAGCTGGCATATAGGTTGCAGTCTCGGCCTCGTGG...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp TCTCTGATGCTCCCCACGAGGCTCATTTCAGTAACAAAGCTCAGAGAAACAACCTTCTGCAGTTTCTCTTaGATTTCCTGTGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SLMLPTRLISVTKLRETTFCSFS*ISCAVW
Trigger: CCAGACTGCACAGGAAATGCAAGAGAAACTGCAGAA...GGTTGTTTCTCTGAGCTTTGTTACTGAAATGAGCCTCGTGGGGAGCATCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCGCACCCAGGGGATCCTaGGTGGTTCTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLAPRGS*VVLSIL
Trigger: CAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGC...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATGGTGGCGGCACAGAGTaGTGCAGTATTCAGACATCT +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDGGGTE*CSIQTS
Trigger: AGATGTCTGAATACTGCAGCACTCTGTGCCGCCACC...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACCATCCACACCATAGATaGCGCCCTCCACACCATGCG +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNHPHHR*RPPHHA
Trigger: CGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATG...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAGTAGGCTTGGGCAGTTaGCGTTGTCAAAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTVGLGS*RCQRAE
Trigger: TTCAGCTCTTTGACAACGCCAACTGCCCAAGCCTAC...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TCTCTGATGCTCCCCACGAGGCTCATTTCAGTAACAAAGCTCAGAGAAACAACCTTCTTTCCATCTTGTTaGTCAACCCCACGATCAGTC +
Preference number: 4 (lower is better)
Translates to: SLMLPTRLISVTKLRETTFFPSC*STPRSV
Trigger: GACTGATCGTGGGGTTGACCAACAAGATGGAAAGAA...GGTTGTTTCTCTGAGCTTTGTTACTGAAATGAGCCTCGTGGGGAGCATCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCTCATGTCTGAGCGCGTaGGCAGTCTCATCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLSCLSA*AVSSSA
Trigger: TGCCGAAGATGAGACTGCCCACGCGCTCAGACATGA...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATGGAGACCACTCGGGCTaGAGCTTAGCAAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDGDHSG*SLARNH
Trigger: GTGATTTCTTGCTAAGCTCCAGCCCGAGTGGTCTCC...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGCACCTGAGTCAAGAGTaGTGGGGGTGGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVHLSQE*WGWRAE
Trigger: CTCAGCTCTCCACCCCCACCACTCTTGACTCAGGTG...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATCGCTCAGAAAACACTTaGGCAAGAGCCTCGATGTAC +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDRSENT*ARASMY
Trigger: GTACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCG...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAACTCAAAGGCAGAGATaGTGGGCACAGGAAACAAGT +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTTQRQR*WAQETS
Trigger: ACTTGTTTCCTGTGCCCATCATCTCTGCCTTTGAGT...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAACCAACGAAAGATCTTTaGGACTTCCATGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKPTKDL*DFHGQR
Trigger: TCTTTGCCCATGGAAGTCTCAAAGATCTTTCGTTGG...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GTGACTCGGTGTGCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTTCTCTCCAGTGAAGTaGACATTGCTCAACACCAGT +
Preference number: 4 (lower is better)
Translates to: VTRCAGNCAKFCSFSCISFSPVK*TLLNTS
Trigger: ACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAA...GGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGCACACCGAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR GCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGAGCATGTCGGCCACGTaGATATCACAAGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVSMSAT*ISQARS
Trigger: TGAGCGGGCTTGTGATATGCACGTGGCCGACATGCT...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAATTCAGACATCTCCTTaGACCGGTGGAATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTIQTSP*TGGILC
Trigger: GCACAGAATTCCACCGGTGCAAGGAGATGTCTGAAT...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGATCAGCTCCTTGTGCTaGAAGGTGGACCAAGACCCC +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQISSLC*KVDQDP
Trigger: GGGGTCTTGGTCCACCTTCCAGCACAAGGAGCTGAT...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAAATTTCCTGTGCAGTCTaGTCACATAGAACATGGACG +
Preference number: 4 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKISCAV*SHRTWT
Trigger: CGTCCATGTTCTATGTGACCAGACTGCACAGGAAAT...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGGGAGGTGACATCATGTaGGAGGGTGTCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGGGDIM*EGVLGT
Trigger: TGTTCCCAGGACACCCTCCCACATGATGTCACCTCC...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGAGGTCCAACCAAGGCTaGCTCTACAGGCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQRSNQG*LYRQRA
Trigger: AGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCT...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTTATGTGCCAAGCACTTaGTACATGATGGTGAATAAA +
Preference number: 4 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLYVPST*YMMVNK
Trigger: TTTATTCACCATCATGTACCAAGTGCTTGGCACATA...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATACAAAATCCTGGCAGTaGGAGTGGAAAGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNTKSWQ*EWKGSL
Trigger: GAGAGAACCTTTCCACTCCCACTGCCAGGATTTTGT...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATGGACCATGGGAGATGTaGAGGAAGTTATCTCACACA +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDGPWEM*RKLSHT
Trigger: TGTGTGAGATAACTTCCTTCACATCTCCCATGGTCC...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp TCTCTTGCATTTCCTGTGCAGTCTGGTCACATAGAACATGGACGTCATAGCCCATCAATAAGGTACAAATaGAAGGCAATGTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLAFPVQSGHIEHGRHSPSIRYK*KAMLAD
Trigger: GTCAGCCAACATTGCCTTGCATTTGTACCTTATTGA...TGGGCTATGACGTCCATGTTCTATGTGACCAGACTGCACAGGAAATGCAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR GCA 90 bp GCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTGTGCAGTCTGGGATAAAATTCAGGAGTaGAAGGCTTCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AGNCAKFCSFSCISCAVWDKIQE*KASQKA
Trigger: TGCCTTCTGTGAAGCCTTGCACTCCTGAATTTTATC...CCAGACTGCACAGGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGGTGACTAGAGTACTGTaGTCCACATCCCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQVTRVL*STSPPE
Trigger: CTCTGGAGGGGATGTGGACCACAGTACTCTAGTCAC...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACATTCTTTCCATCTTGTTaGTCAACCCCACGATCAGTC +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTFFPSC*STPRSV
Trigger: GACTGATCGTGGGGTTGACCAACAAGATGGAAAGAA...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACCCAGGGGATCCTGCGTaGTTCTTTCCATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNPGDPA*FFPSCW
Trigger: CCAACAAGATGGAAAGAACCACGCAGGATCCCCTGG...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACCTATCACACCTCCTGTaGTCCAGTGGCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNLSHLL*SSGFHL
Trigger: CAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAG...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAAGTAAGGGAGAGAGATaGACGTTTCTCAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTSKGER*TFLRKE
Trigger: TTCCTTCCTGAGAAACGTCCATCTCTCTCCCTTACT...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CAA 72 bp TTTATTGAGCACCTTGACTACTACAGGCCTAGCATTTaGCTAGGGACCATGGGAGATGTGAAGGAAGTTATC +
Preference number: 4 (lower is better)
Translates to: FIEHLDYYRPSI*LGTMGDVKEVI
Trigger: GATAACTTCCTTCACATCTCCCATGGTCCCTAGCAAAATGCTAGGCCTGTAGTAGTCAAGGTGCTCAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
3UTR CAA 72 bp AAATACTTCCATACTATGTCGACCCAAAGGCAGGACTaGGCAGCAAGGCTCACAAACCACCCAAACAAATAT +
Preference number: 4 (lower is better)
Translates to: KYFHTMSTQRQD*AARLTNHPNKY
Trigger: ATATTTGTTTGGGTGGTTTGTGAGCCTTGCTGCCAAGTCCTGCCTTTGGGTCGACATAGTATGGAAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCCAGCAGCCAACAGGATaGAATGAAGGTAAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLQQPTG*NEGKEG
Trigger: CCCTTCTTTACCTTCATTTCATCCTGTTGGCTGCTG...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATAACTACTCTGTTATGTaGGAACAGACTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNNYSVM*EQTGGR
Trigger: TCTTCCTCCAGTCTGTTCTCACATAACAGAGTAGTT...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCGATGATGAGGATGCATaGCACACACTCCCAATATCC +
Preference number: 4 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLDDEDA*HTLPIS
Trigger: GGATATTGGGAGTGTGTGGCATGCATCCTCATCATC...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATAACAAACAAGGTTTCTaGCCTCATTTACAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNNKQGF*PHLQPG
Trigger: ACCAGGCTGTAAATGAGGGCAGAAACCTTGTTTGTT...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACCTCTTCAACTGCAGCTaGAACATTCCTGGCAATAGG +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNLFNCS*NIPGNR
Trigger: CCTATTGCCAGGAATGTTTCAGCTGCAGTTGAAGAG...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAATTGTCAAGACTTaGGGAAGAAGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVGIVKT*GRRTPP
Trigger: AGGTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCC...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACGGAATTGTCAAGACTTaGGGAAGAAGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNGIVKT*GRRTPP
Trigger: AGGTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCC...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCTTCTGCAGTTTCTCTTaGATTTCCTGTGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLFCSFS*ISCAVW
Trigger: CCAGACTGCACAGGAAATGCAAGAGAAACTGCAGAA...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACAGGAGTTCCACATTCTaGCTGAAACTGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNRSSTF*LKLPTL
Trigger: CAAAGTGGGCAGTTTCAGCCAGAATGTGGAACTCCT...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGGGCAATACAAAATCCTaGCAGTGGGAGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQGNTKS*QWEWKG
Trigger: ACCTTTCCACTCCCACTGCCAGGATTTTGTATTGCC...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR TCA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGCCAACGAAAGATCTTTaGGACTTCCATGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVPTKDL*DFHGQR
Trigger: TCTTTGCCCATGGAAGTCTCAAAGATCTTTCGTTGG...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGAGACTGCAACCTATATaGCAGCTGGAAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQRLQPI*QLEVCL
Trigger: CAAACACACTTCCAGCTGGCATATAGGTTGCAGTCT...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTTCTCTCCAGTGAAGTaGACATTGCTCAACACCAGT +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQFSPVK*TLLNTS
Trigger: ACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAA...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACCCGATCCTTGATAAGTaGGTTCACCTTAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNPILDK*VHLNQH
Trigger: ATGCTGGTTAAGGTGAACGCACTTATCAAGGATCGG...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR GCA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATAAGCAATCACTAAAGTaGCATCTACAAAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDKQSLK*HLQKLE
Trigger: TTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTT...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTTATTTGGCACCCGATaGCAATACAAAATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQLFGTR*QYKILA
Trigger: TGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAA...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CCA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTCTTTGAGACTTCCATaGGCAAAGATCAATAAGGTA +
Preference number: 4 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQSLRLP*AKINKV
Trigger: TACCTTATTGATCTTTGCCCATGGAAGTCTCAAAGA...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS GCA 90 bp CCCTCCCCTCAGACGCGGACGCACACTGCGCCTGCGCCTGCGCCCTaGCGCGCCCACACACCAGGCCACCCAGTCCCCGGCCCGGTGCGT +
Preference number: 5 (lower is better)
Translates to: PSPQTRTHTAPAPAP*RAHTPGHPVPGPVR
Trigger: ACGCACCGGGCCGGGGACTGGGTGGCCTGGTGTGTGGGCGCGGCAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTCTGAGGGGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 90 bp CCCACATCCCTCCCCTCAGACGCGGACGCACACTGCGCCTGCGCCTaGGCCCTGCCGCGCCCACACACCAGGCCACCCAGTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: PTSLPSDADAHCACA*ALPRPHTRPPSPRP
Trigger: GGGCCGGGGACTGGGTGGCCTGGTGTGTGGGCGCGGCAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTCTGAGGGGAGGGATGTGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 90 bp GCCGTCGCTTCCCCCACATCCCTCCCCTCAGACGCGGACGCACACTaGGCCTGCGCCTGCGCCCTGCCGCGCCCACACACCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: AVASPTSLPSDADAH*ACACALPRPHTRPP
Trigger: GGGTGGCCTGGTGTGTGGGCGCGGCAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTCTGAGGGGAGGGATGTGGGGGAAGCGACGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 90 bp GCTTCCCCCACATCCCTCCCCTCAGACGCGGACGCACACTGCGCCTaGGCCTGCGCCCTGCCGCGCCCACACACCAGGCCACCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: ASPTSLPSDADAHCA*ACALPRPHTRPPSP
Trigger: GGGACTGGGTGGCCTGGTGTGTGGGCGCGGCAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTCTGAGGGGAGGGATGTGGGGGAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 90 bp ACTCCCAATATCCTGCGTCCCCTGTCAGCGGCCATCAGCTCCTTGTaGTGGAAGGTGGACCAAGACCCCGCGCTCGGCGCCGCCATTTCC +
Preference number: 5 (lower is better)
Translates to: TPNILRPLSAAISSL*WKVDQDPALGAAIS
Trigger: GGAAATGGCGGCGCCGAGCGCGGGGTCTTGGTCCACCTTCCAGCACAAGGAGCTGATGGCCGCTGACAGGGGACGCAGGATATTGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310447.10
ENST00000350623.7
ENST00000392925.6
ENST00000619992.4
CDS-3UTR CAA 90 bp CTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTGACTCGGTGTGCGCGGCCATCAGCTCCTaGTGCTGGAAGGTGGACCAA +
Preference number: 5 (lower is better)
Translates to: LHTMREECHDAGVRDSVCAAISS*CWKVDQ
Trigger: TTGGTCCACCTTCCAGCACAAGGAGCTGATGGCCGC...GCACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS GCA 90 bp GACCAGCCTGAGAGCCATGGGCTGCCCAAGTCCCAGCACACCCCATaGATTGGGAGACACTTACAGAGCAAGAGAGGCGGTGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: DQPESHGLPKSQHTP*IGRHLQSKRGGGSS
Trigger: ACTGCTGCCACCGCCTCTCTTGCTCTGTAAGTGTCTCCCAATGCATGGGGTGTGCTGGGACTTGGGCAGCCCATGGCTCTCAGGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS GCA 90 bp GATATGGTGGTGCACGGAGAGCTGACCAGCCTGAGAGCCATGGGCTaGCCAAGTCCCAGCACACCCCATGCATTGGGAGACACTTACAGA +
Preference number: 5 (lower is better)
Translates to: DMVVHGELTSLRAMG*PSPSTPHALGDTYR
Trigger: TCTGTAAGTGTCTCCCAATGCATGGGGTGTGCTGGGACTTGGGCAGCCCATGGCTCTCAGGCTGGTCAGCTCTCCGTGCACCACCATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS-3UTR CAA 90 bp TCGATGTACCAGGAACCTCGTTTGGTGTTCCGCATGGCGGCAGTCCCTTTGAGGGCGGCCATCAGCTCCTaGTGCTGGAAGGTGGACCAA +
Preference number: 5 (lower is better)
Translates to: SMYQEPRLVFRMAAVPLRAAISS*CWKVDQ
Trigger: TTGGTCCACCTTCCAGCACAAGGAGCTGATGGCCGC...CCTCAAAGGGACTGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTACATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp CTCCACACCATGCGAGAGGAGTGCCACGATGCAGGAGTCCGTGACTCGGTGTGCCTCAACAACAGCTGTTaGGCTAGCACCACTCGGTTC +
Preference number: 5 (lower is better)
Translates to: LHTMREECHDAGVRDSVCLNNSC*ASTTRF
Trigger: GAACCGAGTGGTGCTAGCCAAACAGCTGTTGTTGAG...GCACACCGAGTCACGGACTCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGACTGAAACTGCCCACTTaGGCCTGGATGAGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGLKLPT*AWMSSL
Trigger: GAGGGAGCTCATCCAGGCCAAAGTGGGCAGTTTCAG...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp GATGGGGAGGTGACATCATGTGGGAGGGTGTCCTGGGAACAGGTAGAGGTGGCGGGGAATTGTCAAGACTaGAGGAAGAAGGACACCACC +
Preference number: 5 (lower is better)
Translates to: DGEVTSCGRVSWEQVEVAGNCQD*RKKDTT
Trigger: GGTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCCC...CGCCACCTCTACCTGTTCCCAGGACACCCTCCCACATGATGTCACCTCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CAA 90 bp CTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCACCCAAAGGCAGGACTaGGCAGCAAGGCTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LRQLFFTGITLLAPRGSCTQRQD*AARLTN
Trigger: GTTTGTGAGCCTTGCTGCCAAGTCCTGCCTTTGGGT...GCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS TCA 90 bp TCTCTCTTGGGCCTGTCACAGGCAAGCCCACGTTCCCTACAACCTTaGAGGGGAAGAGCCATTTCCAGCTGTTGCCTCCAACCTATGGCT +
Preference number: 5 (lower is better)
Translates to: SLLGLSQASPRSLQP*RGRAISSCCLQPMA
Trigger: AGCCATAGGTTGGAGGCAACAGCTGGAAATGGCTCTTCCCCTTCAAGGTTGTAGGGAACGTGGGCTTGCCTGTGACAGGCCCAAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CCA 90 bp GCTTGGGGACCCCTCTTAGGCAGCAAGTTGAGGAGTTCCACATTCTaGCTGAAACTGCCCACTTTGGCCTGGATGAGCTCCCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: AWGPLLGSKLRSSTF*LKLPTLAWMSSLIS
Trigger: GGAAATGAGGGAGCTCATCCAGGCCAAAGTGGGCAGTTTCAGCCAGAATGTGGAACTCCTCAACTTGCTGCCTAAGAGGGGTCCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310447.10
ENST00000350623.7
ENST00000392925.6
ENST00000481483.1
ENST00000493642.5
ENST00000619992.4
CDS-3UTR CAA 90 bp GCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGCTGAAACTGCCCACTTaGGCCTGGATGAGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: AVSSSATFLYRHHSPRTQLKLPT*AWMSSL
Trigger: GAGGGAGCTCATCCAGGCCAAAGTGGGCAGTTTCAG...CTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTTCCAGTGGCTTCCACTaGGCGTGGATGATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLSSGFH*AWMMGR
Trigger: CCTCCCCATCATCCACGCCAAGTGGAAGCCACTGGA...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AAGAGGGTGACTAGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTCCAGTTCCAGTGGCTTCCACTaGGCGTGGATGATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: KRVTRVLWSTSPPERNSSSSGFH*AWMMGR
Trigger: CCTCCCCATCATCCACGCCAAGTGGAAGCCACTGGA...ACTGGAATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CAA 90 bp ACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGACAGGCTGCGGTGCCTaGAGCCCAAACGAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: TECCSIQTSPCTGGILCQTGCGA*SPNEPR
Trigger: TCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTGT...CTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 90 bp ACTCAGGGGATGCCTCATACACACCGGGCACCACGCTCAAGCACATaGACATCTATGCGGTTGGAGCAGTTCCCATTCTGTGTAAGACAG +
Preference number: 5 (lower is better)
Translates to: TQGMPHTHRAPRSST*TSMRLEQFPFCVRQ
Trigger: CTGTCTTACACAGAATGGGAACTGCTCCAACCGCATAGATGTGCATGTGCTTGAGCGTGGTGCCCGGTGTGTATGAGGCATCCCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS-3UTR CAA 90 bp TGCTCAACACCAGTGCTAGGCCACGAGGCCGAGACTGCAACCTATATGCCAGCTGTTTGTTCTGTAGGCTaGGGCAGTTGGCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: CSTPVLGHEAETATYMPAVCSVG*GSWRCQ
Trigger: TTGACAACGCCAACTGCCCAAGCCTACAGAACAAAC...AGCTGGCATATAGGTTGCAGTCTCGGCCTCGTGGCCTAGCACTGGTGTTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GTTTCCCATCCACACCATAGATGGCGCCCTCCACACCATGCGAGAGGAGTGCCAGTTCTTTCCATCTTGTaGGTCAACCCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: VSHPHHRWRPPHHARGVPVLSIL*VNPTIS
Trigger: ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAAC...TGGCACTCCTCTCGCATGGTGTGGAGGGCGCCATCTATGGTGTGGATGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp AGCTTGAAGAGGGTGACTAGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTACCAGGAACCTCGTTaGGTGTTCCGCATGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SLKRVTRVLWSTSPPERNYQEPR*VFRMAA
Trigger: TGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTA...ATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTCTTCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAAAAATGCAAGGCAATGTaGGCTGACAGGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKKCKAM*ADRLRC
Trigger: GCACCGCAGCCTGTCAGCCAACATTGCCTTGCATTT...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS CCA 90 bp CTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTaGTCAACCCCACGATCAGTCTCATCTGTAACAAAGGCAGACAGA +
Preference number: 5 (lower is better)
Translates to: LSSHPGDPAWFFPSC*STPRSVSSVTKADR
Trigger: TCTGTCTGCCTTTGTTACAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS-3UTR CAA 90 bp AGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGCCAGTGAAGTGCACATaGCTCAACACCAGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: SLIFGNFSLPASLSSHPGPVKCT*LNTSAR
Trigger: CCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGG...CCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp TTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCGTTCTTTCCATCTTGTaGGTCAACCCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: FFTGITLLAPRGSCVVLSVLSIL*VNPTIS
Trigger: ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAAC...GGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GCGCGTGGGCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTCTCCTCGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATC +
Preference number: 5 (lower is better)
Translates to: ARGQSHLRQLFFTGITLLVVLSI*LVNPTI
Trigger: GATCGTGGGGTTGACCAACAAGATGGAAAGAACCAC...GAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGCCCACGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp CTTGATAAGTGCGTTCACCTTAACCAGCATGTCGGCCACGTGCATATCACAAGCTACCAGGAACCTCGTTaGGTGTTCCGCATGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LDKCVHLNQHVGHVHITSYQEPR*VFRMAA
Trigger: TGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTA...GCTTGTGATATGCACGTGGCCGACATGCTGGTTAAGGTGAACGCACTTATCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp CAGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCTCTTAGGCAGCAAGTaGAGGAGTTCCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: QTSPCTGGILCQEHNLPDLLGSK*RSSTFW
Trigger: CCAGAATGTGGAACTCCTCAACTTGCTGCCTAAGAG...ATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp TTGAAGAGGGTGACTAGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTCCCCAGTGAAGTGCACATaGCTCAACACCAGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: LKRVTRVLWSTSPPERNSPVKCT*LNTSAR
Trigger: CCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGG...GGAATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGAGCTGAAAAACCTCTaGGAGCTGGAGCAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: ETVHPEDQRLYHTSCGPVELKNL*ELEQFP
Trigger: GGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTC...CACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp TCTCTGATGCTCCCCACGAGGCTCATTTCAGTAACAAAGCTCAGAGAAACAACCTACCAGGAACCTCGTTaGGTGTTCCGCATGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SLMLPTRLISVTKLRETTYQEPR*VFRMAA
Trigger: TGCCGCCATGCGGAACACCAAACGAGGTTCCTGGTA...GGTTGTTTCTCTGAGCTTTGTTACTGAAATGAGCCTCGTGGGGAGCATCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AGACATCTCCTTGCACCGGTGGAATTCTGTGCCAGGAGCATAACCTTCCCGATCCCGCTCAGAAAACACTaGAGCAAGAGCCTCGATGTA +
Preference number: 5 (lower is better)
Translates to: RHLLAPVEFCARSITFPIPLRKH*SKSLDV
Trigger: TACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGG...GATCGGGAAGGTTATGCTCCTGGCACAGAATTCCACCGGTGCAAGGAGATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp AGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTCCAGTTCTTTCTCTCCAGAGCTGAAAAACCTCTaGGAGCTGGAGCAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: RVLWSTSPPERNSSSFSPELKNL*ELEQFP
Trigger: GGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTC...TGGAGAGAAAGAACTGGAATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp CGTTGTCAAAGAGCTGAAAAACCTCTTGGAGCTGGAGCAGTTTCCCATCCACACCTCTTAGGCAGCAAGTaGAGGAGTTCCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: RCQRAEKPLGAGAVSHPHLLGSK*RSSTFW
Trigger: CCAGAATGTGGAACTCCTCAACTTGCTGCCTAAGAG...GTGTGGATGGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTCTTTGACAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GGGGGCAGAACAGAAACCGTGCATCCTGAAGATCAAAGGCTCTATCACACCTCCATTCTGCAGTTTCTCTaGCATTTCCTGTGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GGRTETVHPEDQRLYHTSILQFL*HFLCSL
Trigger: CAGACTGCACAGGAAATGCAAGAGAAACTGCAGAAT...GGAGGTGTGATAGAGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp TGGCGGCACAGAGTGCTGCAGTATTCAGACATCTCCTTGCACCGGTGGAATTCTATTCTGCAGTTTCTCTaGCATTTCCTGTGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WRHRVLQYSDISLHRWNSILQFL*HFLCSL
Trigger: CAGACTGCACAGGAAATGCAAGAGAAACTGCAGAAT...AGAATTCCACCGGTGCAAGGAGATGTCTGAATACTGCAGCACTCTGTGCCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GTTGGCGTTGTCAAAGAGCTGAAAAACCTCTTGGAGCTGGAGCAGTTTCCCATCGTTTGTTCTGTAGGCTaGGGCAGTTGGCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: VGVVKELKNLLELEQFPIVCSVG*GSWRCQ
Trigger: TTGACAACGCCAACTGCCCAAGCCTACAGAACAAAC...GATGGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTCTTTGACAACGCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp AAAAGGAGCTGGCCTGGAGTCCCACACTCAAAGGCAGAGATGATGGGCACAGGATGTTTACAACTTCACTaGTCAGGCTCTTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: KRSWPGVPHSKAEMMGTGCLQLH*SGSSTA
Trigger: TGCAGTTGAAGAGCCTGACAAGTGAAGTTGTAAACA...TCCTGTGCCCATCATCTCTGCCTTTGAGTGTGGGACTCCAGGCCAGCTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AACTTTTCTTTACCGGCATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTGTTTACAACTTCACTaGTCAGGCTCTTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: NFSLPASLSSHPGDPAWFCLQLH*SGSSTA
Trigger: TGCAGTTGAAGAGCCTGACAAGTGAAGTTGTAAACA...GAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CAA 90 bp CCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTCACAGAAAGTAGCTAAGGTTGGCTaGCCTTCTTCCCTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: PGNRSNQGWLYRQRASQKVAKVG*PSSLFY
Trigger: ATAAAAGAGGGAAGAAGGCAAGCCAACCTTAGCTAC...TTTCTGTGAAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS TCA 90 bp GAGGCCACATTTCCTTCTGCTTTTGCGGTAGTAACTGCCGTAGTCTaGGTCATGTTGCAGGGCCTCAGCAGACTATATTCTGCGGTAATA +
Preference number: 5 (lower is better)
Translates to: EATFPSAFAVVTAVV*VMLQGLSRLYSAVI
Trigger: TATTACCGCAGAATATAGTCTGCTGAGGCCCTGCAACATGACTCAGACTACGGCAGTTACTACCGCAAAAGCAGAAGGAAATGTGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS-3UTR CAA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCGCGGCCATCAGCTCCTaGTGCTGGAAGGTGGACCAA +
Preference number: 5 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLAAISS*CWKVDQ
Trigger: TTGGTCCACCTTCCAGCACAAGGAGCTGATGGCCGC...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGGAGTGGAAACTCAACAACAGCTGTTaGGCTAGCACCACTCGGTTC +
Preference number: 5 (lower is better)
Translates to: SIYLAPDGNTKSWQWEWKLNNSC*ASTTRF
Trigger: GAACCGAGTGGTGCTAGCCAAACAGCTGTTGTTGAG...TTTCCACTCCCACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATTCCAGGTGGCCTTGCTaGGTCTCCCTCAGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDSRWPC*VSLSAS
Trigger: TGAAGCACTGAGGGAGACCAAGCAAGGCCACCTGGA...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR CAA 90 bp GAAACATTCCTGGCAATAGGTCCAACCAAGGCTGGCTCTACAGGCAAAGGGCTTACAGGACCATCTTTATaGTCTAGGGAGTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: ETFLAIGPTKAGSTGKGLTGPSL*SRECST
Trigger: TGTGGAACACTCCCTAGACAATAAAGATGGTCCTGT...AAGCCCTTTGCCTGTAGAGCCAGCCTTGGTTGGACCTATTGCCAGGAATGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310447.10
CDS-3UTR CAA 90 bp CTGAAGATCAAAGGCTCTATCACACCTCCTGTGGTCCAGTGGCTTCCACTTGGCCAGCTGGAAGTGTGTTaGATAAAATTCAGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LKIKGSITPPVVQWLPLGQLEVC*IKFRSA
Trigger: TGCACTCCTGAATTTTATCAAACACACTTCCAGCTG...GCCAAGTGGAAGCCACTGGACCACAGGAGGTGTGATAGAGCCTTTGATCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp TGTCTGAGCGCGTGGGCAGTCTCATCTTCGGCAACTTTTCTTTACCGGCATCACTATTTATTGAGCACCTaGACTACTACAGGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: CLSAWAVSSSATFLYRHHYLLST*TTTGLA
Trigger: TGCTAGGCCTGTAGTAGTCAAGGTGCTCAATAAATA...GTGATGCCGGTAAAGAAAAGTTGCCGAAGATGAGACTGCCCACGCGCTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CAA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACACCAGTGAAGTGCACATaGCTCAACACCAGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTPVKCT*LNTSAR
Trigger: CCTAGCACTGGTGTTGAGCAATGTGCACTTCACTGG...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp GTGACTCGGTGTGCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCCCGCTCAGAAAACACTaGAGCAAGAGCCTCGATGTA +
Preference number: 5 (lower is better)
Translates to: VTRCAGNCAKFCSFSCISPLRKH*SKSLDV
Trigger: TACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGG...GGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGCACACCGAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp TCTCTTGCATTTCCTGTGCAGTCTGGTCACATAGAACATGGACGTCATAGCCCATATTCAGACATCTCCTaGCACCGGTGGAATTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLAFPVQSGHIEHGRHSPYSDIS*HRWNSV
Trigger: CACAGAATTCCACCGGTGCAAGGAGATGTCTGAATA...TGGGCTATGACGTCCATGTTCTATGTGACCAGACTGCACAGGAAATGCAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGACAGGCTGCGGTGCCTaGAGCCCAAACGAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGTGCGA*SPNEPR
Trigger: TCTTGGCTCGTTTGGGCTCAAGGCACCGCAGCCTGT...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp GTTGGCGTTGTCAAAGAGCTGAAAAACCTCTTGGAGCTGGAGCAGTTTCCCATCACCAACGAAAGATCTTaGAGACTTCCATGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VGVVKELKNLLELEQFPITNERS*RLPWAK
Trigger: CTTTGCCCATGGAAGTCTCAAAGATCTTTCGTTGGT...GATGGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTCTTTGACAACGCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CAA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGCTGAAACTGCCCACTTaGGCCTGGATGAGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQLKLPT*AWMSSL
Trigger: GAGGGAGCTCATCCAGGCCAAAGTGGGCAGTTTCAG...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AGAGTACTGTGGTCCACATCCCCTCCAGAGCGAAATTCCAGTTCTTTCTCTCCACAGCTGGAAGTGTGTTaGATAAAATTCAGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: RVLWSTSPPERNSSSFSPQLEVC*IKFRSA
Trigger: TGCACTCCTGAATTTTATCAAACACACTTCCAGCTG...TGGAGAGAAAGAACTGGAATTTCGCTCTGGAGGGGATGTGGACCACAGTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp TTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATATGAATGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATC +
Preference number: 5 (lower is better)
Translates to: FGHLPNSHSRTKRAEDMNVVLSI*LVNPTI
Trigger: GATCGTGGGGTTGACCAACAAGATGGAAAGAACCAC...ATTCATATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATC +
Preference number: 5 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTVVLSI*LVNPTI
Trigger: GATCGTGGGGTTGACCAACAAGATGGAAAGAACCAC...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp GTGACTCGGTGTGCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTATTCAGACATCTCCTaGCACCGGTGGAATTCTGTG +
Preference number: 5 (lower is better)
Translates to: VTRCAGNCAKFCSFSCISYSDIS*HRWNSV
Trigger: CACAGAATTCCACCGGTGCAAGGAGATGTCTGAATA...GGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGCACACCGAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCACCCAAAGGCAGGACTaGGCAGCAAGGCTCACAAAC +
Preference number: 5 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLTQRQD*AARLTN
Trigger: GTTTGTGAGCCTTGCTGCCAAGTCCTGCCTTTGGGT...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp GCGAAATTCCAGTTCTTTCTCTCCAGTGAAGTGCACATTGCTCAACACCAGTGCCAGCTGGAAGTGTGTTaGATAAAATTCAGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: AKFQFFLSSEVHIAQHQCQLEVC*IKFRSA
Trigger: TGCACTCCTGAATTTTATCAAACACACTTCCAGCTG...GCACTGGTGTTGAGCAATGTGCACTTCACTGGAGAGAAAGAACTGGAATTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACAAATGCAAGGCAATGTaGGCTGACAGGCTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNKCKAM*ADRLRC
Trigger: GCACCGCAGCCTGTCAGCCAACATTGCCTTGCATTT...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS TCA 90 bp GGTCAACACATCAAAAGTAAGAGTATGCTCTTTTACAGTACTTCCTaGTCCATGCAATGTCGAGGGAGCCTAGGAAAGAAGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GQHIKSKSMLFYSTS*SMQCRGSLGKKGSF
Trigger: GAAGCTTCCCTTCTTTCCTAGGCTCCCTCGACATTGCATGGATCAGGAAGTACTGTAAAAGAGCATACTCTTACTTTTGATGTGTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS-3UTR CAA 90 bp GTGCAGGTAACTGTGCAAAATTCTGCAGTTTCTCTTGCATTTCCTGTGCAGTCTATTCTGCAGTTTCTCTaGCATTTCCTGTGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: VQVTVQNSAVSLAFPVQSILQFL*HFLCSL
Trigger: CAGACTGCACAGGAAATGCAAGAGAAACTGCAGAAT...AGACTGCACAGGAAATGCAAGAGAAACTGCAGAATTTTGCACAGTTACCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS-3UTR CAA 90 bp GTAATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGGAGCTGAAAAACCTCTaGGAGCTGGAGCAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: VINMSIYLAPDGNTKSWQELKNL*ELEQFP
Trigger: GGGAAACTGCTCCAGCTCCAAGAGGTTTTTCAGCTC...CTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp TCTCTTGCATTTCCTGTGCAGTCTGGTCACATAGAACATGGACGTCATAGCCCAAATATGAGCATTTATTaGGCACCCGATGGCAATACA +
Preference number: 5 (lower is better)
Translates to: SLAFPVQSGHIEHGRHSPNMSIY*APDGNT
Trigger: TGTATTGCCATCGGGTGCCAAATAAATGCTCATATT...TGGGCTATGACGTCCATGTTCTATGTGACCAGACTGCACAGGAAATGCAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS-3UTR CAA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACCTCTTAGGCAGCAAGTaGAGGAGTTCCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNLLGSK*RSSTFW
Trigger: CCAGAATGTGGAACTCCTCAACTTGCTGCCTAAGAG...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AATAAATATGAGCATTTATTTGGCACCCGATGGCAATACAAAATCCTGGCAGTGGTTTGTTCTGTAGGCTaGGGCAGTTGGCGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: NKYEHLFGTRWQYKILAVVCSVG*GSWRCQ
Trigger: TTGACAACGCCAACTGCCCAAGCCTACAGAACAAAC...CACTGCCAGGATTTTGTATTGCCATCGGGTGCCAAATAAATGCTCATATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGCCGCTCAGAAAACACTaGAGCAAGAGCCTCGATGTA +
Preference number: 5 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGPLRKH*SKSLDV
Trigger: TACATCGAGGCTCTTGCTCAAGTGTTTTCTGAGCGG...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AGGACAAAAAGGGCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCTATTCAGACATCTCCTaGCACCGGTGGAATTCTGTG +
Preference number: 5 (lower is better)
Translates to: RTKRAEDMNEIKDRRWSLYSDIS*HRWNSV
Trigger: CACAGAATTCCACCGGTGCAAGGAGATGTCTGAATA...GAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGCCCTTTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGGGGAATTGTCAAGACTaGAGGAAGAAGGACACCACC +
Preference number: 5 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGGNCQD*RKKDTT
Trigger: GGTGGTGTCCTTCTTCCTCAAGTCTTGACAATTCCC...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp ATTAAATTTGGACACCTTCCAAACTCTCACTCTAGGACAAAAAGGGCGGAGGATGTAGCTAAGGTTGGCTaGCCTTCTTCCCTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: IKFGHLPNSHSRTKRAEDVAKVG*PSSLFY
Trigger: ATAAAAGAGGGAAGAAGGCAAGCCAACCTTAGCTAC...ATCCTCCGCCCTTTTTGTCCTAGAGTGAGAGTTTGGAAGGTGTCCAAATTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGGTTCTTTCCATCTTGTaGGTCAACCCCACGATCAGT +
Preference number: 5 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGVLSIL*VNPTIS
Trigger: ACTGATCGTGGGGTTGACCAACAAGATGGAAAGAAC...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp TTACATGATCCTGTAAAGCAGGATTCTAGACAGATTTGGTGGCAGCAGCCAACAAATATGAGCATTTATTaGGCACCCGATGGCAATACA +
Preference number: 5 (lower is better)
Translates to: LHDPVKQDSRQIWWQQPTNMSIY*APDGNT
Trigger: TGTATTGCCATCGGGTGCCAAATAAATGCTCATATT...TGTTGGCTGCTGCCACCAAATCTGTCTAGAATCCTGCTTTACAGGATCATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp AAAGCAATCACTAAAGTGCCATCTACAAAAGCTGGAACTGAACACAAATATGGGACCAACGAAAGATCTTaGAGACTTCCATGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: KAITKVPSTKAGTEHKYGTNERS*RLPWAK
Trigger: CTTTGCCCATGGAAGTCTCAAAGATCTTTCGTTGGT...CCCATATTTGTGTTCAGTTCCAGCTTTTGTAGATGGCACTTTAGTGATTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS-3UTR CAA 90 bp GCGGAGGATATGAATGAAATAAAAGATAGGAGATGGTCTCTCAGACATCTTAACTATTTATTGAGCACCTaGACTACTACAGGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: AEDMNEIKDRRWSLRHLNYLLST*TTTGLA
Trigger: TGCTAGGCCTGTAGTAGTCAAGGTGCTCAATAAATA...GTTAAGATGTCTGAGAGACCATCTCCTATCTTTTATTTCATTCATATCCTCCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000619992.4
CDS GCA 72 bp CTCCCCTCAGACGCGGACGCACACTGCGCCTGCGCCTaGGCCCTGCCGCGCCCACACACCAGGCCACCCAGT +
Preference number: 6 (lower is better)
Translates to: LPSDADAHCACA*ALPRPHTRPPS
Trigger: ACTGGGTGGCCTGGTGTGTGGGCGCGGCAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTCTGAGGGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 72 bp TCCCCCACATCCCTCCCCTCAGACGCGGACGCACACTaGGCCTGCGCCTGCGCCCTGCCGCGCCCACACACC +
Preference number: 6 (lower is better)
Translates to: SPTSLPSDADAH*ACACALPRPHT
Trigger: GGTGTGTGGGCGCGGCAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTCTGAGGGGAGGGATGTGGGGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 72 bp ACATCCCTCCCCTCAGACGCGGACGCACACTGCGCCTaGGCCTGCGCCCTGCCGCGCCCACACACCAGGCCA +
Preference number: 6 (lower is better)
Translates to: TSLPSDADAHCA*ACALPRPHTRP
Trigger: TGGCCTGGTGTGTGGGCGCGGCAGGGCGCAGGCGCAGGCGCAGTGTGCGTCCGCGTCTGAGGGGAGGGATGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619992.4
CDS GCA 72 bp ATCCTGCGTCCCCTGTCAGCGGCCATCAGCTCCTTGTaGTGGAAGGTGGACCAAGACCCCGCGCTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: ILRPLSAAISSL*WKVDQDPALGA
Trigger: GGCGCCGAGCGCGGGGTCTTGGTCCACCTTCCAGCACAAGGAGCTGATGGCCGCTGACAGGGGACGCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310447.10
ENST00000350623.7
ENST00000392925.6
ENST00000619992.4
CDS CAA 90 bp CACACTCCCAATATCCTGCGTCCCCTGTCAGCGGCCATCAGCTCCTaGTGCTGGAAGGTGGACCAAGACCCCGCGCTCGGCGCCGCCATT +
Preference number: 6 (lower is better)
Translates to: HTPNILRPLSAAISS*CWKVDQDPALGAAI
Trigger: AATGGCGGCGCCGAGCGCGGGGTCTTGGTCCACCTTCCAGCACAAGGAGCTGATGGCCGCTGACAGGGGACGCAGGATATTGGGAGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310447.10
ENST00000350623.7
ENST00000392925.6
ENST00000619992.4
CDS CAA 90 bp AGCCTGAGAGCCATGGGCTGCCCAAGTCCCAGCACACCCCATGCATaGGGAGACACTTACAGAGCAAGAGAGGCGGTGGCAGCAGTGAAC +
Preference number: 6 (lower is better)
Translates to: SLRAMGCPSPSTPHA*GDTYRAREAVAAVN
Trigger: GTTCACTGCTGCCACCGCCTCTCTTGCTCTGTAAGTGTCTCCCAATGCATGGGGTGTGCTGGGACTTGGGCAGCCCATGGCTCTCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS GCA 72 bp GAGAGCCATGGGCTGCCCAAGTCCCAGCACACCCCATaGATTGGGAGACACTTACAGAGCAAGAGAGGCGGT +
Preference number: 6 (lower is better)
Translates to: ESHGLPKSQHTP*IGRHLQSKRGG
Trigger: ACCGCCTCTCTTGCTCTGTAAGTGTCTCCCAATGCATGGGGTGTGCTGGGACTTGGGCAGCCCATGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp GGGCCTGTCACAGGCAAGCCCACGTTCCCTACAACCTaGAAGGGGAAGAGCCATTTCCAGCTGTTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: GPVTGKPTFPTT*KGKSHFQLLPP
Trigger: TGGAGGCAACAGCTGGAAATGGCTCTTCCCCTTCAAGGTTGTAGGGAACGTGGGCTTGCCTGTGACAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp ACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTaGGTCAACCCCACGATCAGTCTCATAGAGCAAGAGAGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: TLLAPRGSCVVLSIL*VNPTISLIEQERRW
Trigger: CCACCGCCTCTCTTGCTCTATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493642.5
CDS TCA 72 bp GGCCTGTCACAGGCAAGCCCACGTTCCCTACAACCTTaGAGGGGAAGAGCCATTTCCAGCTGTTGCCTCCAA +
Preference number: 6 (lower is better)
Translates to: GLSQASPRSLQP*RGRAISSCCLQ
Trigger: TTGGAGGCAACAGCTGGAAATGGCTCTTCCCCTTCAAGGTTGTAGGGAACGTGGGCTTGCCTGTGACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp ATCTCTCTTGGGCCTGTCACAGGCAAGCCCACGTTCCCTACAACCTaGAAGGGGAAGAGCCATTTCCAGCTGTTGCCTCCAACCTATGGC +
Preference number: 6 (lower is better)
Translates to: ISLGPVTGKPTFPTT*KGKSHFQLLPPTYG
Trigger: GCCATAGGTTGGAGGCAACAGCTGGAAATGGCTCTTCCCCTTCAAGGTTGTAGGGAACGTGGGCTTGCCTGTGACAGGCCCAAGAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp ATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATCAGTCTCATAGAGCAAGAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: ITLLAPRGSCVVLSI*LVNPTISLIEQERR
Trigger: CCGCCTCTCTTGCTCTATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493642.5
CDS CCA 72 bp CCCCTCTTAGGCAGCAAGTTGAGGAGTTCCACATTCTaGCTGAAACTGCCCACTTTGGCCTGGATGAGCTCC +
Preference number: 6 (lower is better)
Translates to: PLLGSKLRSSTF*LKLPTLAWMSS
Trigger: GGAGCTCATCCAGGCCAAAGTGGGCAGTTTCAGCCAGAATGTGGAACTCCTCAACTTGCTGCCTAAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310447.10
ENST00000350623.7
ENST00000392925.6
ENST00000481483.1
ENST00000493642.5
ENST00000619992.4
CDS CCA 72 bp AGCCCAGAAAGGGTGGTGAGCAACATATCCTCCAGGTaGCCTTGCTTGGTCTCCCTCAGTGCTTCACAGAAG +
Preference number: 6 (lower is better)
Translates to: SPERVVSNISSR*PCLVSLSASQK
Trigger: CTTCTGTGAAGCACTGAGGGAGACCAAGCAAGGCCACCTGGAGGATATGTTGCTCACCACCCTTTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310447.10
ENST00000392925.6
ENST00000481483.1
ENST00000493642.5
CDS GCA 72 bp GAAAGGGTGGTGAGCAACATATCCTCCAGGTGGCCTTaGTTGGTCTCCCTCAGTGCTTCACAGAAGGCATCA +
Preference number: 6 (lower is better)
Translates to: ERVVSNISSRWP*LVSLSASQKAS
Trigger: TGATGCCTTCTGTGAAGCACTGAGGGAGACCAAGCAAGGCCACCTGGAGGATATGTTGCTCACCACCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310447.10
ENST00000392925.6
ENST00000481483.1
ENST00000493642.5
CDS GCA 72 bp ATGCCTCATACACACCGGGCACCACGCTCAAGCACATaGACATCTATGCGGTTGGAGCAGTTCCCATTCTGT +
Preference number: 6 (lower is better)
Translates to: MPHTHRAPRSST*TSMRLEQFPFC
Trigger: ACAGAATGGGAACTGCTCCAACCGCATAGATGTGCATGTGCTTGAGCGTGGTGCCCGGTGTGTATGAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CCA 72 bp GGTGTGGGCAGGGGTGCTGTCAGTAGGCAAGACAGATaGGGAGGACTCTCAGGTCAACACATCAAAAGTAAG +
Preference number: 6 (lower is better)
Translates to: GVGRGAVSRQDR*GGLSGQHIKSK
Trigger: CTTACTTTTGATGTGTTGACCTGAGAGTCCTCCCCATCTGTCTTGCCTACTGACAGCACCCCTGCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp ACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTaGGTCAACCCCACGATCAGTCTCATCTGTAACAAAGGCAGACAG +
Preference number: 6 (lower is better)
Translates to: TLLAPRGSCVVLSIL*VNPTISLICNKGRQ
Trigger: CTGTCTGCCTTTGTTACAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS GCA 72 bp AGAGGCCACATTTCCTTCTGCTTTTGCGGTAGTAACTaGCGTAGTCTGAGTCATGTTGCAGGGCCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: RGHISFCFCGSN*RSLSHVAGPQQ
Trigger: CTGCTGAGGCCCTGCAACATGACTCAGACTACGGCAGTTACTACCGCAAAAGCAGAAGGAAATGTGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp CGGGCACCACGCTCAAGCACATGCACATCTATGCGGTaGGAGCAGTTCCCATTCTGTGTAAGACAGGGAAAA +
Preference number: 6 (lower is better)
Translates to: RAPRSSTCTSMR*EQFPFCVRQGK
Trigger: TTTTCCCTGTCTTACACAGAATGGGAACTGCTCCAACCGCATAGATGTGCATGTGCTTGAGCGTGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp ATCACTCTCCTCGCACCCAGGGGATCCTGCGTGGTTCTTTCCATCTaGTTGGTCAACCCCACGATCAGTCTCATCTGTAACAAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: ITLLAPRGSCVVLSI*LVNPTISLICNKGR
Trigger: TCTGCCTTTGTTACAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTGCGAGGAGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp CATACACACCGGGCACCACGCTCAAGCACATGCACATCTATGCGGTaGGAGCAGTTCCCATTCTGTGTAAGACAGGGAAAATGCCAAATC +
Preference number: 6 (lower is better)
Translates to: HTHRAPRSSTCTSMR*EQFPFCVRQGKCQI
Trigger: GATTTGGCATTTTCCCTGTCTTACACAGAATGGGAACTGCTCCAACCGCATAGATGTGCATGTGCTTGAGCGTGGTGCCCGGTGTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CCA 72 bp CACCCAGGGGATCCTGCGTGGTTCTTTCCATCTTGTTaGTCAACCCCACGATCAGTCTCATCTGTAACAAAG +
Preference number: 6 (lower is better)
Translates to: HPGDPAWFFPSC*STPRSVSSVTK
Trigger: CTTTGTTACAGATGAGACTGATCGTGGGGTTGACCAACAAGATGGAAAGAACCACGCAGGATCCCCTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CCA 72 bp CCTAGGGATAGAGTGAAGAGAAAATTCCTGCCGTCATaGAGCTTACACTCCAGTTTAGAAGCTGACTGGGGC +
Preference number: 6 (lower is better)
Translates to: PRDRVKRKFLPS*SLHSSLEADWG
Trigger: GCCCCAGTCAGCTTCTAAACTGGAGTGTAAGCTCCATGACGGCAGGAATTTTCTCTTCACTCTATCCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp CCGAGACTGCAACCTATATGCCAGCTGGAAGTGTGTTaGATAAAATTCAGGAGTGCAAGGCTTCACCTGAAG +
Preference number: 6 (lower is better)
Translates to: PRLQPICQLEVC*IKFRSARLHLK
Trigger: CTTCAGGTGAAGCCTTGCACTCCTGAATTTTATCAAACACACTTCCAGCTGGCATATAGGTTGCAGTCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310447.10
ENST00000493642.5
CDS CAA 72 bp CCGAGACTGCAACCTATATGCCAGCTGGAAGTGTGTTaGATAAAATTCAGGAGTGCAAGGCTTCACAGAAGG +
Preference number: 6 (lower is better)
Translates to: PRLQPICQLEVC*IKFRSARLHRR
Trigger: CCTTCTGTGAAGCCTTGCACTCCTGAATTTTATCAAACACACTTCCAGCTGGCATATAGGTTGCAGTCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350623.7
ENST00000619992.4
CDS CAA 72 bp CCAGGAAGGGTGTCTAATTTCCCAACTCTCTTCCTCTaGTCATTATGCAAAAACTCACCAGCTGGAAGTGTG +
Preference number: 6 (lower is better)
Translates to: PGRVSNFPTLFL*SLCKNSPAGSV
Trigger: CACACTTCCAGCTGGTGAGTTTTTGCATAATGACAAGAGGAAGAGAGTTGGGAAATTAGACACCCTTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481483.1
CDS CAA 90 bp TCTTCCTCTTGTCATTATGCAAAAACTCACCAGCTGGAAGTGTGTTaGATAAAATTCAGGAGTGCAAGGCTTCACCTGAAGGCAGACAGG +
Preference number: 6 (lower is better)
Translates to: SSSCHYAKTHQLEVC*IKFRSARLHLKADR
Trigger: CCTGTCTGCCTTCAGGTGAAGCCTTGCACTCCTGAATTTTATCAAACACACTTCCAGCTGGTGAGTTTTTGCATAATGACAAGAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481483.1
CDS GCA 72 bp ATCTGTTTGGGAGGAGGGGAGACACAACATGCCCTCTaGCTCTCAGTGTACTTATCATATTGTATTGTTTCT +
Preference number: 6 (lower is better)
Translates to: ICLGGGETQHAL*LSVYLSYCIVS
Trigger: AGAAACAATACAATATGATAAGTACACTGAGAGGCAGAGGGCATGTTGTGTCTCCCCTCCTCCCAAACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp TTCAGGTTCCCAGGAAGGGTGTCTAATTTCCCAACTCTCTTCCTCTaGTCATTATGCAAAAACTCACCAGCTGGAAGTGTGTTTGATAAA +
Preference number: 6 (lower is better)
Translates to: FRFPGRVSNFPTLFL*SLCKNSPAGSVFDK
Trigger: TTTATCAAACACACTTCCAGCTGGTGAGTTTTTGCATAATGACAAGAGGAAGAGAGTTGGGAAATTAGACACCCTTCCTGGGAACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481483.1
CDS GCA 72 bp GAGGACTCTCAGGTCAACACATCAAAAGTAAGAGTATaGTCTTTTACAGTACTTCCTGATCCATGCAATGTC +
Preference number: 6 (lower is better)
Translates to: EDSQVNTSKVRV*SFTVLPDPCNV
Trigger: GACATTGCATGGATCAGGAAGTACTGTAAAAGAGCATACTCTTACTTTTGATGTGTTGACCTGAGAGTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp GTAATTTCTCAACATACCCTGAGCAGATCCTTGCTCTaGATACAAGCCTTATGTATCCCAAGACAGACTCTT +
Preference number: 6 (lower is better)
Translates to: VISQHTLSRSLL*IQALCIPRQTL
Trigger: AAGAGTCTGTCTTGGGATACATAAGGCTTGTATCAAGAGCAAGGATCTGCTCAGGGTATGTTGAGAAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp TTAGCAGTAATTTCTCAACATACCCTGAGCAGATCCTaGCTCTTGATACAAGCCTTATGTATCCCAAGACAG +
Preference number: 6 (lower is better)
Translates to: LAVISQHTLSRS*LLIQALCIPRQ
Trigger: CTGTCTTGGGATACATAAGGCTTGTATCAAGAGCAAGGATCTGCTCAGGGTATGTTGAGAAATTACTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp TGTCATTATGCAAAAACTCACCAGCTGGAAGTGTGTTaGATAAAATTCAGGAGTGCAAGGCTTCACCTGAAG +
Preference number: 6 (lower is better)
Translates to: CHYAKTHQLEVC*IKFRSARLHLK
Trigger: CTTCAGGTGAAGCCTTGCACTCCTGAATTTTATCAAACACACTTCCAGCTGGTGAGTTTTTGCATAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481483.1
CDS CAA 90 bp AGGGGAGACACAACATGCCCTCTGCCTCTCAGTGTACTTATCATATaGTATTGTTTCTTTCCTACGACAGACTCTAGATACTACTCTATA +
Preference number: 6 (lower is better)
Translates to: RGDTTCPLPLSVLII*YCFFPTTDSRYYSI
Trigger: TATAGAGTAGTATCTAGAGTCTGTCGTAGGAAAGAAACAATACAATATGATAAGTACACTGAGAGGCAGAGGGCATGTTGTGTCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp CTTAAAATGATCTACTCTTACTGCATACTCCTTCCTAAGTACAGTTaGTACCTTGCTAATTTCACCTTTGCTTACATGAGGCCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: LKMIYSYCILLPKYS*YLANFTFAYMRPVN
Trigger: GTTCACAGGCCTCATGTAAGCAAAGGTGAAATTAGCAAGGTACAAACTGTACTTAGGAAGGAGTATGCAGTAAGAGTAGATCATTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp ATCTACTCTTACTGCATACTCCTTCCTAAGTACAGTTaGTACCTTGCTAATTTCACCTTTGCTTACATGAGG +
Preference number: 6 (lower is better)
Translates to: IYSYCILLPKYS*YLANFTFAYMR
Trigger: CCTCATGTAAGCAAAGGTGAAATTAGCAAGGTACAAACTGTACTTAGGAAGGAGTATGCAGTAAGAGTAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp GGATATAGGATGAGAAAATCACAATTTAACGTCGTTTaGTTAGTAAAGACGCCTAAAGGAAACAGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: GYRMRKSQFNVV*LVKTPKGNRPS
Trigger: GCTTGGCCTGTTTCCTTTAGGCGTCTTTACTAACAAAACGACGTTAAATTGTGATTTTCTCATCCTATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 90 bp ATTTTAGCAGTAATTTCTCAACATACCCTGAGCAGATCCTTGCTCTaGATACAAGCCTTATGTATCCCAAGACAGACTCTTATTTTTGAT +
Preference number: 6 (lower is better)
Translates to: ILAVISQHTLSRSLL*IQALCIPRQTLIFD
Trigger: ATCAAAAATAAGAGTCTGTCTTGGGATACATAAGGCTTGTATCAAGAGCAAGGATCTGCTCAGGGTATGTTGAGAAATTACTGCTAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472067.1
CDS CAA 72 bp AGGAAGACAGGTGAACTCAAATTTTCAATGGAACAATaGGCTACTGGTCATTCCTTGAAGGATTTAATTTCA +
Preference number: 6 (lower is better)
Translates to: RKTGELKFSMEQ*ATGHSLKDLIS
Trigger: TGAAATTAAATCCTTCAAGGAATGACCAGTAGCCAATTGTTCCATTGAAAATTTGAGTTCACCTGTCTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472067.1