RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000003400

Ensembl transcript IDs: ENST00000272879.9, ENST00000286186.11, ENST00000313728.11, ENST00000346817.9, ENST00000360132.7, ENST00000374650.7, ENST00000438843.5, ENST00000448480.1, ENST00000460140.5, ENST00000484926.1, ENST00000485408.1, ENST00000492363.5

Found 772 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTaGATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGCCAAGCTCC +
Preference number: 1 (lower is better)
Translates to: PKSRPLPALCHVLIA*IVFRWAFAQPLPSS
Trigger: GGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
3UTR GCA 90 bp AGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTaGCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGCCAAG +
Preference number: 1 (lower is better)
Translates to: RAEEQASPGSVSCPD*LHSLQVGVCPAFAK
Trigger: CTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
3UTR TCA 90 bp ACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTGCCAGCCCTaGGGACATCCGGCCAAGAGAAAGGTGCTGGCCTGTAGATTGAGT +
Preference number: 1 (lower is better)
Translates to: TRWGLSTAVYCICQP*GHPAKRKVLACRLS
Trigger: ACTCAATCTACAGGCCAGCACCTTTCTCTTGGCCGGATGTCCTCAGGGCTGGCAGATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR GCA 90 bp GGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTaGTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAG +
Preference number: 1 (lower is better)
Translates to: GCRIARWCCKGRFPS*CRALSISGDVAGRQ
Trigger: CTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
3UTR GCA 90 bp ACTGTCCTGCAGGGAAGTGGGTGCCTGCTCAGGGTTCAGAGCATCTaGTTCGATGGATACGGAAGGCTGTATCTCTTCACCTTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: TVLQGSGCLLRVQSI*FDGYGRLYLFTLAG
Trigger: GCCTGCCAAGGTGAAGAGATACAGCCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 90 bp AAGTCAGCCTCGGCAGGAATACTGTCCTGCAGGGAAGTGGGTGCCTaGTCAGGGTTCAGAGCATCTGCTTCGATGGATACGGAAGGCTGT +
Preference number: 1 (lower is better)
Translates to: KSASAGILSCREVGA*SGFRASASMDTEGC
Trigger: ACAGCCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGCCGAGGCTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR CCA 90 bp CTCCCATGGGTCAGAATACAGAACACGAAGCAGTCCCCGTCGGCATaGGCTGGATTGCACTTCTGCTTCTGCAGGACCATCTCCATTTCC +
Preference number: 1 (lower is better)
Translates to: LPWVRIQNTKQSPSA*AGLHFCFCRTISIS
Trigger: GGAAATGGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTTCGTGTTCTGTATTCTGACCCATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR CCA 90 bp AGCTGCCTTCCTCCACATGCCGAAAGGATACATAGCCTGGGACAGTaGCCAGACCAAGTAGGAAGTCAGCCTCGGCAGGAATACTGTCCT +
Preference number: 1 (lower is better)
Translates to: SCLPPHAERIHSLGQ*PDQVGSQPRQEYCP
Trigger: AGGACAGTATTCCTGCCGAGGCTGACTTCCTACTTGGTCTGGCCACTGTCCCAGGCTATGTATCCTTTCGGCATGTGGAGGAAGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR TCA 90 bp AGCCCTGAGGACATCCGGCCAAGAGAAAGGTGCTGGCCTGTAGATTaGGTCCTGATTCAAGCTTTGCCTGAAGCCAGTGTTATCCACTCC +
Preference number: 1 (lower is better)
Translates to: SPEDIRPRERCWPVD*VLIQALPEASVIHS
Trigger: GGAGTGGATAACACTGGCTTCAGGCAAAGCTTGAATCAGGACTCAATCTACAGGCCAGCACCTTTCTCTTGGCCGGATGTCCTCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR TCA 90 bp AGTTTAGGTTTTTCAGCCAGTCTAGGGCACTGCAGGGCTGTGAAGTaGGACATGATCTCCCGAATGGGAATGAGGGCCTCATCCGAAGAG +
Preference number: 1 (lower is better)
Translates to: SLGFSASLGHCRAVK*DMISRMGMRASSEE
Trigger: CTCTTCGGATGAGGCCCTCATTCCCATTCGGGAGATCATGTCTCACTTCACAGCCCTGCAGTGCCCTAGACTGGCTGAAAAACCTAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 90 bp CAGAACACGAAGCAGTCCCCGTCGGCATGGGCTGGATTGCACTTCTaGTTCTGCAGGACCATCTCCATTTCCACTTTCGTCACATTATTG +
Preference number: 1 (lower is better)
Translates to: QNTKQSPSAWAGLHF*FCRTISISTFVTLL
Trigger: CAATAATGTGACGAAAGTGGAAATGGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTTCGTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 90 bp TCAGAATACAGAACACGAAGCAGTCCCCGTCGGCATGGGCTGGATTaGACTTCTGCTTCTGCAGGACCATCTCCATTTCCACTTTCGTCA +
Preference number: 1 (lower is better)
Translates to: SEYRTRSSPRRHGLD*TSASAGPSPFPLSS
Trigger: TGACGAAAGTGGAAATGGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTTCGTGTTCTGTATTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR CCA 90 bp CTGAGAACAGCTTCAGTTTCTGACACAGCCTCTCTCCTCATGCCTTaGGCCAGAGGAGCAAAGTGTAGTAGCAGTAACAAGGTGGGGACT +
Preference number: 1 (lower is better)
Translates to: LRTASVSDTASLLMP*ARGAKCSSSNKVGT
Trigger: AGTCCCCACCTTGTTACTGCTACTACACTTTGCTCCTCTGGCCCAAGGCATGAGGAGAGAGGCTGTGTCAGAAACTGAAGCTGTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR CCA 90 bp ATGGGTCAGAATACAGAACACGAAGCAGTCCCCGTCGGCATGGGCTaGATTGCACTTCTGCTTCTGCAGGACCATCTCCATTTCCACTTT +
Preference number: 1 (lower is better)
Translates to: MGQNTEHEAVPVGMG*IALLLLQDHLHFHF
Trigger: AAAGTGGAAATGGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTTCGTGTTCTGTATTCTGACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 90 bp AAGGGAACAGAAGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTaGAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGC +
Preference number: 1 (lower is better)
Translates to: KGTEECHVQKSQLCG*RIARWCCKGRFPSC
Trigger: GCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCTTCTGTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
3UTR CCA 90 bp AGGGAGGTAAAGCTGTGGTTGTTGACAATGACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGC +
Preference number: 1 (lower is better)
Translates to: REVKLWLLTMTQRPL*FRFILYTAALITTC
Trigger: GCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
3UTR TCA 90 bp CTCAGAGGCCTGACAGGAGGTTTTATCAACAGCATTTTGTCCAACTaGACTCAGAGTCAAGAGCTGGCCTTCTGCTGCGGTAGACATCAC +
Preference number: 1 (lower is better)
Translates to: LRGLTGGFINSILSN*TQSQELAFCCGRHH
Trigger: GTGATGTCTACCGCAGCAGAAGGCCAGCTCTTGACTCTGAGTTCAGTTGGACAAAATGCTGTTGATAAAACCTCCTGTCAGGCCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 90 bp ACGAAGCAGTCCCCGTCGGCATGGGCTGGATTGCACTTCTGCTTCTaGAGGACCATCTCCATTTCCACTTTCGTCACATTATTGTGTATA +
Preference number: 1 (lower is better)
Translates to: TKQSPSAWAGLHFCF*RTISISTFVTLLCI
Trigger: TATACACAATAATGTGACGAAAGTGGAAATGGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR CCA 90 bp AACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTaGCTGAAGTCAAATCCAGTAAATGAGGACTGTGAGCAGGTTGTT +
Preference number: 1 (lower is better)
Translates to: NTPNALPRPKAFQFT*LKSNPVNEDCEQVV
Trigger: AACAACCTGCTCACAGTCCTCATTTACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR TCA 90 bp TTCACTTGCCTTCACATGTCAGTTCTGCCAACTGGACAAGGACTGTaGCCACTAGCTTTTGGCCCTGACTGTTATGAACACGGTTTTGGG +
Preference number: 1 (lower is better)
Translates to: FTCLHMSVLPTGQGL*PLAFGPDCYEHGFG
Trigger: CCCAAAACCGTGTTCATAACAGTCAGGGCCAAAAGCTAGTGGTCACAGTCCTTGTCCAGTTGGCAGAACTGACATGTGAAGGCAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR TCA 90 bp AGAAAGGTGCTGGCCTGTAGATTGAGTCCTGATTCAAGCTTTGCCTaGAGCCAGTGTTATCCACTCCTGGGTTTCAATGTGAAAGAGGCA +
Preference number: 1 (lower is better)
Translates to: RKVLACRLSPDSSFA*SQCYPLLGFNVKEA
Trigger: TGCCTCTTTCACATTGAAACCCAGGAGTGGATAACACTGGCTTCAGGCAAAGCTTGAATCAGGACTCAATCTACAGGCCAGCACCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR TCA 90 bp GGAATGTGCTTATTAAGGCTCATTGTTTTCCTGGAACCCATTGTATaGAGGCAAAGTTTGGCAGTTACCCAAGAGACTTCCCCCACCCCC +
Preference number: 1 (lower is better)
Translates to: GMCLLRLIVFLEPIV*RQSLAVTQETSPTP
Trigger: GGGGGTGGGGGAAGTCTCTTGGGTAACTGCCAAACTTTGCCTTCATACAATGGGTTCCAGGAAAACAATGAGCCTTAATAAGCACATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 90 bp GGACCAATTTCTTCAGATGATTACACAGAGACTGAATATACCAGCTaGCTTCCTCCACATGCCGAAAGGATACATAGCCTGGGACAGTGG +
Preference number: 1 (lower is better)
Translates to: GPISSDDYTETEYTS*LPPHAERIHSLGQW
Trigger: CCACTGTCCCAGGCTATGTATCCTTTCGGCATGTGGAGGAAGGCAGCTGGTATATTCAGTCTCTGTGTAATCATCTGAAGAAATTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR TCA 90 bp AAGAATGTCTTAACATCTGTTTGGGAAACTAGTTCTTCCTCTCCTTaGTACGACTCGGCTTCCTTGTCTACAGGAGGTGTCACTATCTGG +
Preference number: 1 (lower is better)
Translates to: KNVLTSVWETSSSSP*YDSASLSTGGVTIW
Trigger: CCAGATAGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAACTAGTTTCCCAAACAGATGTTAAGACATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
3UTR GCA 90 bp CAGCTGGAATTACGCACAAAGGAACTTAAGTCCTGCTATTTCTGTTaGAGTTACAACCGGAAGACCCTACCACCTAAAGGCATTTATATG +
Preference number: 1 (lower is better)
Translates to: QLELRTKELKSCYFC*SYNRKTLPPKGIYM
Trigger: CATATAAATGCCTTTAGGTGGTAGGGTCTTCCGGTTGTAACTGCAACAGAAATAGCAGGACTTAAGTTCCTTTGTGCGTAATTCCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR CCA 90 bp CAGAGCCCACTCACTTACAGACTAAGAGTTTTTAAGGATTTAGGGTaGGAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGC +
Preference number: 1 (lower is better)
Translates to: QSPLTYRLRVFKDLG*ESLSEAWIASMSLC
Trigger: GCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTCCCACCCTAAATCCTTAAAAACTCTTAGTCTGTAAGTGAGTGGGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR CCA 90 bp TCTATGCCAGAGCTGTCTTATCTGTATTTTACTCTCTTCTCTTTCTaGCTGCTCGCTGTTAGAAAAGAAGTGATTTCCTTGAAATGCATG +
Preference number: 1 (lower is better)
Translates to: SMPELSYLYFTLFSF*LLAVRKEVISLKCM
Trigger: CATGCATTTCAAGGAAATCACTTCTTTTCTAACAGCGAGCAGCCAGAAAGAGAAGAGAGTAAAATACAGATAAGACAGCTCTGGCATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 90 bp CTAAAGGCATTTATATGCACCTCAGCACAGTTAGATTTAAATAGATaGACACATAGGACACATTCTTTTTCGTCTTCCCAACAGCTAATG +
Preference number: 1 (lower is better)
Translates to: LKAFICTSAQLDLNR*THRTHSFSSSQQLM
Trigger: CATTAGCTGTTGGGAAGACGAAAAAGAATGTGTCCTATGTGTGCATCTATTTAAATCTAACTGTGCTGAGGTGCATATAAATGCCTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGGTGGGAGGATCGCTTaGACCTGGGAGGTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVGGRIA*TWEVKA
Trigger: AGCCTTGACCTCCCAGGTTCAAGCGATCCTCCCACC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR CAA 90 bp GCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTaGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: ARWCCKGRFPSCCRA*SISGDVAGRQAEGS
Trigger: GCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
3UTR CAA 90 bp TGGCTGGCAGGGATGGGGGTCACAAGGTGCTCACTGGGGGAGCTTTaGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAAGGTAATGTC +
Preference number: 2 (lower is better)
Translates to: WLAGMGVTRCSLGEL*SQDEPGEGISQGNV
Trigger: GACATTACCTTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAGCTCCCCCAGTGAGCACCTTGTGACCCCCATCCCTGCCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAGGTCAAGGCTGCAGTaGACAGTGATCCCACCACTG +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVRSRLQ*TVIPPL
Trigger: CAGTGGTGGGATCACTGTTCACTGCAGCCTTGACCT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGGCAGTTGTGTCATCTTaGCTCACCACAGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRAVVSS*LTTASA
Trigger: GGCAGAGGCTGTGGTGAGCCAAGATGACACAACTGC...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGCCCTGTTGCCCAAGCTaGAGTGCAGTTGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRPCCPS*SAVVSS
Trigger: AGATGACACAACTGCACTCCAGCTTGGGCAACAGGG...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGTAGCAGTAACAAGGTaGGGACTGTCCACTGCAGTC +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVVAVTR*GLSTAV
Trigger: GACTGCAGTGGACAGTCCCCACCTTGTTACTGCTAC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGTATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGG +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRYDGLA*AQRPDR
Trigger: CCTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATA...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATTGGGCCTAGGAGTTTaGAACCAGCCTGTGCAACAA +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVLGLGV*NQPVQQ
Trigger: TTGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGGCTGCAGTGAACAGTaGTCCCACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIGCSEQ*SHHCTP
Trigger: TGGAGTGCAGTGGTGGGATCACTGTTCACTGCAGCC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGAGGTCACAAGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRRSQGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCTTGTGACCT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATTCCTGTTTCTAGAATaGCAGGTGGAGACCACCGAT +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVFLFLE*QVETTD
Trigger: ATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGGCGGGAGGACAGCTTaGGCCTGGGAGGTCGAGACT +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSGGRTA*AWEVET
Trigger: AGTCTCGACCTCCCAGGCTCAAGCTGTCCTCCCGCC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATGCATCTGCCAGCCCTaGGGACATCCGGCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSCICQP*GHPAKR
Trigger: TCTCTTGGCCGGATGTCCTCAGGGCTGGCAGATGCA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAACAGCTTCAGTTTCTaGCACAGCCTCTCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVNSFSF*HSLSPH
Trigger: ATGAGGAGAGAGGCTGTGTCAGAAACTGAAGCTGTT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGCTTTGGATCTCCCTATaGGGGCTCACCTTTAAGGAT +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRLWISL*GLTFKD
Trigger: ATCCTTAAAGGTGAGCCCTCATAGGGAGATCCAAAG...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGTGGGGACTGTCCACTaGAGTCTACTGCATCTGCCA +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIVGTVH*SLLHLP
Trigger: TGGCAGATGCAGTAGACTGCAGTGGACAGTCCCCAC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGCCAGACATCCCCTCTaGCAAGAAGAGCCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIARHPL*QEEPSD
Trigger: ATCACTGGGCTCTTCTTGGCAGAGGGGATGTCTGGC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCAAAATCCGGGCACGGTaGTACACACCTGTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIKIRAR*YTPVVP
Trigger: TGGGACCACAGGTGTGTACCACCGTGCCCGGATTTT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGCTCACCACAGCCTCTaGCTCCTGGATTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIAHHSL*LLDSRD
Trigger: ATCTCTTGAATCCAGGAGGCAGAGGCTGTGGTGAGC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR GCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGTTCACATGTCAGTTCTaGCAACTGGACAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRFTCQF*QLDKDC
Trigger: ACAGTCCTTGTCCAGTTGGCAGAACTGACATGTGAA...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGCTGGATTGCACTTCTaGTTCTGCAGGACCATCTCC +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIAGLHF*FCRTIS
Trigger: GGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAAAAATCCGGGCACGGTaGTACACACCTGTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPKIRAR*YTPVVP
Trigger: TGGGACCACAGGTGTGTACCACCGTGCCCGGATTTT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTTTTGGGGACAGAGGTaGGAGGATCACTTGGGCCTA +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIFWGQR*EDHLGL
Trigger: TAGGCCCAAGTGATCCTCCCACCTCTGTCCCCAAAA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGATAATCCCAGTATTTTaGGGACAGAGGTGGGAGGAT +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRIIPVF*GQRWED
Trigger: ATCCTCCCACCTCTGTCCCCAAAATACTGGGATTAT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAAAGTTAGCTGTGCATaGACACACACCTGTAGTCTC +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVKVSCA*THTCSL
Trigger: GAGACTACAGGTGTGTGTCCATGCACAGCTAACTTT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAGCAGGAAATGGGCCTaGCATAGACCAAATTTTCAC +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVSRKWA*HRPNFH
Trigger: GTGAAAATTTGGTCTATGCCAGGCCCATTTCCTGCT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCCCCTGTTGCCCAAGCTaGAGTGCAGTTGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIPCCPS*SAVVSS
Trigger: AGATGACACAACTGCACTCCAGCTTGGGCAACAGGG...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGTGTATCTCTTCACCTTaGCAGGCCTGGATGAAAAAG +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRCISSP*QAWMKK
Trigger: CTTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACA...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR TCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAAGGGTGGGTGGACTGTaGCCTCACTGTCCAATGTTT +
Preference number: 2 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPRVGGL*PHCPMF
Trigger: AAACATTGGACAGTGAGGTCACAGTCCACCCACCCT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTGCATCTGCCAGCCCTaGGGACATCCGGCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLCICQP*GHPAKR
Trigger: TCTCTTGGCCGGATGTCCTCAGGGCTGGCAGATGCA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGAAATGCAGGCACCACTaGGAGTTGTTGTTCTTCATT +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRKCRHH*ELLFFI
Trigger: AATGAAGAACAACAACTCTCAGTGGTGCCTGCATTT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAACTGGACAAGGACTGTaGCCACTAGCTTTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPTGQGL*PLAFGP
Trigger: AGGGCCAAAAGCTAGTGGTCACAGTCCTTGTCCAGT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGTGGGGACTGTCCACTaGAGTCTACTGCATCTGCCA +
Preference number: 2 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAVGTVH*SLLHLP
Trigger: TGGCAGATGCAGTAGACTGCAGTGGACAGTCCCCAC...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCCTGCAGGGAAGTGGGTaGCTGCTCAGGGTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSLQGSG*LLRVQS
Trigger: GCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAG...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCAAAATCCGGGCACGGTaGTACACACCTGTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTKIRAR*YTPVVP
Trigger: TGGGACCACAGGTGTGTACCACCGTGCCCGGATTTT...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR CAA 90 bp AGGGTGGGAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTaGCTGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATA +
Preference number: 2 (lower is better)
Translates to: RVGEFIRGLDCFYVS*LCLSGRESCVSVPI
Trigger: TATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTCCCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATGGCGGGAGGACAGCTTaGGCCTGGGAGGTCGAGACT +
Preference number: 2 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNGGRTA*AWEVET
Trigger: AGTCTCGACCTCCCAGGCTCAAGCTGTCCTCCCGCC...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCGGTGGGAGGATCGCTTaGACCTGGGAGGTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGGGRIA*TWEVKA
Trigger: AGCCTTGACCTCCCAGGTTCAAGCGATCCTCCCACC...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATGCAGGGCTGTGAAGTaGGACATGATCTCCCGAATG +
Preference number: 2 (lower is better)
Translates to: CAYLGGRVVCPFPYNISACRAVK*DMISRM
Trigger: CATTCGGGAGATCATGTCTCACTTCACAGCCCTGCA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR GCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGCTCACCACAGCCTCTaGCTCCTGGATTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSAHHSL*LLDSRD
Trigger: ATCTCTTGAATCCAGGAGGCAGAGGCTGTGGTGAGC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCCAGCCTCTCTCCTCATaGCTTGGGCCAGAGGAGCAA +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSQPLSS*LGPEEQ
Trigger: TTGCTCCTCTGGCCCAAGGCATGAGGAGAGAGGCTG...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCAGTCCCCGTCGGCATaGGCTGGATTGCACTTCTGC +
Preference number: 2 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGQSPSA*AGLHFC
Trigger: GCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGGATGTCTTCATGTCTTaGGACCAATTTCTTCAGATG +
Preference number: 2 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRDVFMS*DQFLQM
Trigger: CATCTGAAGAAATTGGTCCCAAGACATGAAGACATC...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATTGGGCCTAGGAGTTTaGAACCAGCCTGTGCAACAA +
Preference number: 2 (lower is better)
Translates to: CAYLGGRVVCPFPYNISALGLGV*NQPVQQ
Trigger: TTGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGCCCAGGTGACGGAGTaGCTCTGTCTCAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSAQVTE*LCLKEK
Trigger: TTTTTCTTTGAGACAGAGTCACTCCGTCACCTGGGC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTCTCCCGAATGGGAATaGGGGCCTCATCCGAAGAGT +
Preference number: 2 (lower is better)
Translates to: TKATIQVFNNESFLARCGSPEWE*GPHPKS
Trigger: ACTCTTCGGATGAGGCCCTCATTCCCATTCGGGAGA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGCAGCCTCTCTCCTCATaGCTTGGGCCAGAGGAGCAA +
Preference number: 2 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVQPLSS*LGPEEQ
Trigger: TTGCTCCTCTGGCCCAAGGCATGAGGAGAGAGGCTG...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGCCAGACATCCCCTCTaGCAAGAAGAGCCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSARHPL*QEEPSD
Trigger: ATCACTGGGCTCTTCTTGGCAGAGGGGATGTCTGGC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGACCTTAAAATGCACCTaGTCCCCAGGCCAGGCACAG +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLTLKCT*SPGQAQ
Trigger: CTGTGCCTGGCCTGGGGACCAGGTGCATTTTAAGGT...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCCACAAAAGCAGGAAATaGGCCTGGCATAGACCAAAT +
Preference number: 2 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIHKSRK*AWHRPN
Trigger: ATTTGGTCTATGCCAGGCCCATTTCCTGCTTTTGTG...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGTGATCTGCCTGCCTTaGCTTCCCAGAGTACTGGGA +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSVICLP*LPRVLG
Trigger: TCCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCAC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATCAGTCAATTTGAATTaGGTGTTCTGTCAATGGCAA +
Preference number: 2 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVSVNLN*VFCQWQ
Trigger: TTGCCATTGACAGAACACCCAATTCAAATTGACTGA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGAGCATCTGCTTCGATaGATACGGAAGGCTGTATCT +
Preference number: 2 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPEHLLR*IRKAVS
Trigger: AGATACAGCCTTCCGTATCCATCGAAGCAGATGCTC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCAAAGGATACATAGCCTaGGACAGTGGCCAGACCAAG +
Preference number: 2 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTKGYIA*DSGQTK
Trigger: CTTGGTCTGGCCACTGTCCCAGGCTATGTATCCTTT...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR TCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAGGTCAAGGCTGCAGTaGACAGTGATCCCACCACTG +
Preference number: 2 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGRSRLQ*TVIPPL
Trigger: CAGTGGTGGGATCACTGTTCACTGCAGCCTTGACCT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGAGGTCAAGGCTGCAGTaGACAGTGATCCCACCACTG +
Preference number: 2 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVRSRLQ*TVIPPL
Trigger: CAGTGGTGGGATCACTGTTCACTGCAGCCTTGACCT...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGCAGCTGAGTGTAAATaGGCCATCATCTTCCTACAG +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSAAECK*AIIFLQ
Trigger: CTGTAGGAAGATGATGGCTCATTTACACTCAGCTGC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGATTCAAGCTTTGCCTaGAGCCAGTGTTATCCACTC +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSDSSFA*SQCYPL
Trigger: GAGTGGATAACACTGGCTTCAGGCAAAGCTTGAATC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAAACAGCTTCAGTTTCTaGCACAGCCTCTCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSNSFSF*HSLSPH
Trigger: ATGAGGAGAGAGGCTGTGTCAGAAACTGAAGCTGTT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCTGTGTATATGCACTGTaGACCCAAGCCACTGGAACA +
Preference number: 2 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTCVYAL*TQATGT
Trigger: TGTTCCAGTGGCTTGGGTTCACAGTGCATATACACA...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR GCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATTTGAAACCAGCCTGTaGAACAAAGTGAGATCCCTC +
Preference number: 2 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPFETSL*NKVRSL
Trigger: GAGGGATCTCACTTTGTTGCACAGGCTGGTTTCAAA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAGGGAAGTGGGTGCCTaGTCAGGGTTCAGAGCATCT +
Preference number: 2 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGREVGA*SGFRAS
Trigger: AGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAGCAGGAATACTGTCCTaGAGGGAAGTGGGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIAGILS*REVGAC
Trigger: GCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGC...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTTTTGGGGACAGAGGTaGGAGGATCACTTGGGCCTA +
Preference number: 2 (lower is better)
Translates to: TKATIQVFNNESFLARCGFWGQR*EDHLGL
Trigger: TAGGCCCAAGTGATCCTCCCACCTCTGTCCCCAAAA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCAGATCAGAGAGAGGGTaGGTGGACTGTGACCTCACT +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSRSERG*VDCDLT
Trigger: AGTGAGGTCACAGTCCACCCACCCTCTCTCTGATCT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCACACAAAAGCAGGAAATaGGCCTGGCATAGACCAAAT +
Preference number: 2 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPHKSRK*AWHRPN
Trigger: ATTTGGTCTATGCCAGGCCCATTTCCTGCTTTTGTG...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCGCTCCAAATCTCCCATaGGTCAGAATACAGAACACG +
Preference number: 2 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTAPNLP*VRIQNT
Trigger: CGTGTTCTGTATTCTGACCCATGGGAGATTTGGAGC...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR TCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGAGCCACTGGAACACATaGCTCAGGATCTCAGCATCT +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLSHWNT*LRISAS
Trigger: AGATGCTGAGATCCTGAGTCATGTGTTCCAGTGGCT...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGCTCACCACAGCCTCTaGCTCCTGGATTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVAHHSL*LLDSRD
Trigger: ATCTCTTGAATCCAGGAGGCAGAGGCTGTGGTGAGC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGGTCAGTTCTGCCAACTaGACAAGGACTGTGACCACT +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLVSSAN*TRTVTT
Trigger: AGTGGTCACAGTCCTTGTCCAGTTGGCAGAACTGAC...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCCCGTCGGCATGGGCTaGATTGCACTTCTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNPVGMG*IALLLL
Trigger: CAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTTCCTGTTTCTAGAATaGCAGGTGGAGACCACCGAT +
Preference number: 2 (lower is better)
Translates to: TKATIQVFNNESFLARCGFLFLE*QVETTD
Trigger: ATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTTCCTGTTTCTAGAATaGCAGGTGGAGACCACCGAT +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLFLFLE*QVETTD
Trigger: ATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGCAGCTGAGTGTAAATaGGCCATCATCTTCCTACAG +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSAAECK*AIIFLQ
Trigger: CTGTAGGAAGATGATGGCTCATTTACACTCAGCTGC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATCTGTCAATGGCAACTaGAATGTTCCAACCCCAATA +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSSVNGN*NVPTPI
Trigger: TATTGGGGTTGGAACATTTCAGTTGCCATTGACAGA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR GCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATCTTCTCTTTCTGGCTaGTCGCTGTTAGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: CAYLGGRVVCPFPYNISASSLSG*SLLEKK
Trigger: CTTCTTTTCTAACAGCGAGCAGCCAGAAAGAGAAGA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCACTGAATATACCAGCTaGCTTCCTCCACATGCCGAA +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSTEYTS*LPPHAE
Trigger: TTCGGCATGTGGAGGAAGGCAGCTGGTATATTCAGT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGCACCCAGTCCAAAATaGAATATGACATCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSAPSPK*NMTSGC
Trigger: ACAACCTGATGTCATATTCCATTTTGGACTGGGTGC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTTTGCTGTGCTTATCTaGGAGGGAGAGTTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLFAVLI*EGELCV
Trigger: GACACACAACTCTCCCTCCCAGATAAGCACAGCAAA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR TCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCATTGGGCCTAGGAGTTTaGAACCAGCCTGTGCAACAA +
Preference number: 2 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPLGLGV*NQPVQQ
Trigger: TTGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAA...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR TCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGATTCAAGCTTTGCCTaGAGCCAGTGTTATCCACTC +
Preference number: 2 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVDSSFA*SQCYPL
Trigger: GAGTGGATAACACTGGCTTCAGGCAAAGCTTGAATC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAAGGGTTCAGAGCATCTaGTTCGATGGATACGGAAGG +
Preference number: 2 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPRVQSI*FDGYGR
Trigger: CCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCT...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAGATCAGAGAGAGGGTaGGTGGACTGTGACCTCACT +
Preference number: 2 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNRSERG*VDCDLT
Trigger: AGTGAGGTCACAGTCCACCCACCCTCTCTCTGATCT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGGCATTCCAGTTCACCTaGCTGAAGTCAAATCCAGTA +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLAFQFT*LKSNPV
Trigger: TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGC...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATATGAAGGCAAAGTTTaGCAGTTACCCAAGAGACTT +
Preference number: 2 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAYEGKV*QLPKRL
Trigger: AAGTCTCTTGGGTAACTGCCAAACTTTGCCTTCATA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGTTTGAAACCAGCCTGTaGAACAAAGTGAGATCCCTC +
Preference number: 2 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVFETSL*NKVRSL
Trigger: GAGGGATCTCACTTTGTTGCACAGGCTGGTTTCAAA...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCACAAAGAAAAAGTACCTaGACAAACCAAAGCCAATTA +
Preference number: 2 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPQRKST*TNQSQL
Trigger: TAATTGGCTTTGGTTTGTGCAGGTACTTTTTCTTTG...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTCTTCTCTTTCTGGCTaGTCGCTGTTAGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLSSLSG*SLLEKK
Trigger: CTTCTTTTCTAACAGCGAGCAGCCAGAAAGAGAAGA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCATAATCCCAGTATTTTaGGGACAGAGGTGGGAGGAT +
Preference number: 2 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGIIPVF*GQRWED
Trigger: ATCCTCCCACCTCTGTCCCCAAAATACTGGGATTAT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTGGGTGTTCTGTCAATaGCAACTGAAATGTTCCAAC +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSWVFCQ*QLKCSN
Trigger: GTTGGAACATTTCAGTTGCCATTGACAGAACACCCA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGGCTCATTGTTTTCCTaGAACCCATTGTATGAAGGC +
Preference number: 2 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVGSLFS*NPLYEG
Trigger: GCCTTCATACAATGGGTTCCAGGAAAACAATGAGCC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTGTAAAGTTTCTGCTTaGAGAGCAGCTGAGTGTAAA +
Preference number: 2 (lower is better)
Translates to: NAQNLNEESIKASLQSHSCKVSA*RAAECK
Trigger: TTTACACTCAGCTGCTCTGCAAGCAGAAACTTTACA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTCTAGGCTAAGAACGTaGTTTTTGAACACCAAGGAA +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLSRLRT*FLNTKE
Trigger: TTCCTTGGTGTTCAAAAACCACGTTCTTAGCCTAGA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATCACCTTGGCAGGCCTaGATGAAAAAGAGTTTAGGT +
Preference number: 2 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSISPWQA*MKKSLG
Trigger: ACCTAAACTCTTTTTCATCCAGGCCTGCCAAGGTGA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAGCAGGAAATGGGCCTaGCATAGACCAAATTTTCAC +
Preference number: 2 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNSRKWA*HRPNFH
Trigger: GTGAAAATTTGGTCTATGCCAGGCCCATTTCCTGCT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCACAAAAGCAGGAAATaGGCCTGGCATAGACCAAAT +
Preference number: 2 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNHKSRK*AWHRPN
Trigger: ATTTGGTCTATGCCAGGCCCATTTCCTGCTTTTGTG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTCAGTCAATTTGAATTaGGTGTTCTGTCAATGGCAA +
Preference number: 2 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLSVNLN*VFCQWQ
Trigger: TTGCCATTGACAGAACACCCAATTCAAATTGACTGA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATTGGGTGTTCTGTCAATaGCAACTGAAATGTTCCAAC +
Preference number: 2 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNWVFCQ*QLKCSN
Trigger: GTTGGAACATTTCAGTTGCCATTGACAGAACACCCA...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR GCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATTGTAAAGTTTCTGCTTaGAGAGCAGCTGAGTGTAAA +
Preference number: 2 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNCKVSA*RAAECK
Trigger: TTTACACTCAGCTGCTCTGCAAGCAGAAACTTTACA...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 72 bp GAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTaGCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: EQASPGSVSCPD*LHSLQVGVCPA
Trigger: GGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
3UTR TCA 72 bp GGACTGTCCACTGCAGTCTACTGCATCTGCCAGCCCTaGGGACATCCGGCCAAGAGAAAGGTGCTGGCCTGT +
Preference number: 3 (lower is better)
Translates to: GLSTAVYCICQP*GHPAKRKVLAC
Trigger: ACAGGCCAGCACCTTTCTCTTGGCCGGATGTCCTCAGGGCTGGCAGATGCAGTAGACTGCAGTGGACAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR GCA 72 bp AGCCTCGGCAGGAATACTGTCCTGCAGGGAAGTGGGTaGCTGCTCAGGGTTCAGAGCATCTGCTTCGATGGA +
Preference number: 3 (lower is better)
Translates to: SLGRNTVLQGSG*LLRVQSICFDG
Trigger: TCCATCGAAGCAGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGCCGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 72 bp CCAAGTAGGAAGTCAGCCTCGGCAGGAATACTGTCCTaGAGGGAAGTGGGTGCCTGCTCAGGGTTCAGAGCA +
Preference number: 3 (lower is better)
Translates to: PSRKSASAGILS*REVGACSGFRA
Trigger: TGCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGCCGAGGCTGACTTCCTACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 72 bp AGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTaGATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: RPLPALCHVLIA*IVFRWAFAQPL
Trigger: CAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
3UTR CCA 72 bp CCTCCACATGCCGAAAGGATACATAGCCTGGGACAGTaGCCAGACCAAGTAGGAAGTCAGCCTCGGCAGGAA +
Preference number: 3 (lower is better)
Translates to: PPHAERIHSLGQ*PDQVGSQPRQE
Trigger: TTCCTGCCGAGGCTGACTTCCTACTTGGTCTGGCCACTGTCCCAGGCTATGTATCCTTTCGGCATGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 72 bp AAGCAGTCCCCGTCGGCATGGGCTGGATTGCACTTCTaGTTCTGCAGGACCATCTCCATTTCCACTTTCGTC +
Preference number: 3 (lower is better)
Translates to: KQSPSAWAGLHF*FCRTISISTFV
Trigger: GACGAAAGTGGAAATGGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 72 bp CAGGGAAGTGGGTGCCTGCTCAGGGTTCAGAGCATCTaGTTCGATGGATACGGAAGGCTGTATCTCTTCACC +
Preference number: 3 (lower is better)
Translates to: QGSGCLLRVQSI*FDGYGRLYLFT
Trigger: GGTGAAGAGATACAGCCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR CCA 72 bp GTCAGAATACAGAACACGAAGCAGTCCCCGTCGGCATaGGCTGGATTGCACTTCTGCTTCTGCAGGACCATC +
Preference number: 3 (lower is better)
Translates to: VRIQNTKQSPSA*AGLHFCFCRTI
Trigger: GATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTTCGTGTTCTGTATTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR TCA 72 bp TTTTCAGCCAGTCTAGGGCACTGCAGGGCTGTGAAGTaGGACATGATCTCCCGAATGGGAATGAGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: FSASLGHCRAVK*DMISRMGMRAS
Trigger: TGAGGCCCTCATTCCCATTCGGGAGATCATGTCTCACTTCACAGCCCTGCAGTGCCCTAGACTGGCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 72 bp GAGTGCAGTTGTGTCATCTTGGCTCACCACAGCCTCTaGCTCCTGGATTCAAGAGATTCTCCTGTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: ECSCVILAHHSL*LLDSRDSPVSA
Trigger: GGCTGAGACAGGAGAATCTCTTGAATCCAGGAGGCAGAGGCTGTGGTGAGCCAAGATGACACAACTGCACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR GCA 72 bp TTTAAACAAGGTCTCGCCCTGTTGCCCAAGCTGGAGTaGAGTTGTGTCATCTTGGCTCACCACAGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: FKQGLALLPKLE*SCVILAHHSLC
Trigger: GCAGAGGCTGTGGTGAGCCAAGATGACACAACTGCACTCCAGCTTGGGCAACAGGGCGAGACCTTGTTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR GCA 72 bp ATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTaGTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCT +
Preference number: 3 (lower is better)
Translates to: IARWCCKGRFPS*CRALSISGDVA
Trigger: AGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
3UTR CCA 72 bp AATACAGAACACGAAGCAGTCCCCGTCGGCATGGGCTaGATTGCACTTCTGCTTCTGCAGGACCATCTCCAT +
Preference number: 3 (lower is better)
Translates to: NTEHEAVPVGMG*IALLLLQDHLH
Trigger: ATGGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTGCTTCGTGTTCTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCAGTGATCTGCCTGCCTaGGCTTCCCAGAGTACTGGG +
Preference number: 3 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCISDLPA*ASQSTG
Trigger: CCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCACT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCCTTGGGCCTAGGAGTTaGAAACCAGCCTGTGCAACA +
Preference number: 3 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCILGPRS*KPACAT
Trigger: TGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAAG...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCACTCTCTCCTCATGCCTaGGGCCAGAGGAGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSLSPHA*GQRSKV
Trigger: CACTTTGCTCCTCTGGCCCAAGGCATGAGGAGAGAG...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR TCA 72 bp CTGTGTCAGAAAACACGGTGTTTCCTGTTTCTAGAATaGCAGGTGGAGACCACCGATTCCTGTGCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: LCQKTRCFLFLE*QVETTDSCAGQ
Trigger: CTGCCCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGTGTTTTCTGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR TCA 72 bp GACATCCGGCCAAGAGAAAGGTGCTGGCCTGTAGATTaGGTCCTGATTCAAGCTTTGCCTGAAGCCAGTGTT +
Preference number: 3 (lower is better)
Translates to: DIRPRERCWPVD*VLIQALPEASV
Trigger: AACACTGGCTTCAGGCAAAGCTTGAATCAGGACTCAATCTACAGGCCAGCACCTTTCTCTTGGCCGGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR GCA 72 bp TCATCCTGTACACAGCTGCCCTCATTACTACCTGCATaGTTATTTTGCCAGGACTCCTGCGGTAAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: SSCTQLPSLLPA*LFCQDSCGKAS
Trigger: GGAAGCCTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
3UTR GCA 72 bp ATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTaGTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCC +
Preference number: 3 (lower is better)
Translates to: IRGLDCFYVSLL*LSGRESCVSVP
Trigger: GGGAACGGACACACAACTCTCCCTCCCAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 72 bp GAAGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTaGAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: EECHVQKSQLCG*RIARWCCKGRF
Trigger: AAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
3UTR GCA 72 bp ACACAGCTGCCCTCATTACTACCTGCATGCTTATTTTaGCAGGACTCCTGCGGTAAGGCTTCCAAGAATGTC +
Preference number: 3 (lower is better)
Translates to: TQLPSLLPACLF*QDSCGKASKNV
Trigger: GACATTCTTGGAAGCCTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGAGGGCAGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
3UTR CCA 72 bp AAGCTGTGGTTGTTGACAATGACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTACACAGCTGCCCTCATT +
Preference number: 3 (lower is better)
Translates to: KLWLLTMTQRPL*FRFILYTAALI
Trigger: AATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGTCAACAACCACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
3UTR-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCACTTGGGCCTAGGAGTTaGAAACCAGCCTGTGCAACA +
Preference number: 3 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSLGPRS*KPACAT
Trigger: TGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAAG...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCAGTGATCTGCCTGCCTaGGCTTCCCAGAGTACTGGG +
Preference number: 3 (lower is better)
Translates to: NAQNLNEESIKASLQSHSSDLPA*ASQSTG
Trigger: CCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCACT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGTCCTGATTCAAGCTTaGCCTGAAGCCAGTGTTATC +
Preference number: 3 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIVLIQA*PEASVI
Trigger: GATAACACTGGCTTCAGGCAAAGCTTGAATCAGGAC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGAGGACTGTGAGCAGGTaGTTCACATCCCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLRTVSR*FTSPGL
Trigger: GAGGCCTGGGGATGTGAACAACCTGCTCACAGTCCT...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR TCA 72 bp CTTCACATGTCAGTTCTGCCAACTGGACAAGGACTGTaGCCACTAGCTTTTGGCCCTGACTGTTATGAACAC +
Preference number: 3 (lower is better)
Translates to: LHMSVLPTGQGL*PLAFGPDCYEH
Trigger: GTGTTCATAACAGTCAGGGCCAAAAGCTAGTGGTCACAGTCCTTGTCCAGTTGGCAGAACTGACATGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR CCA 72 bp ATATGTGCAGGTCACAAGGGATATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGGAGGTTTTATCAACAG +
Preference number: 3 (lower is better)
Translates to: ICAGHKGYDGLA*AQRPDRRFYQQ
Trigger: CTGTTGATAAAACCTCCTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCTTGTGACCTGCACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATTTGCTTCAGTCAATTaGAATTGGGTGTTCTGTCAA +
Preference number: 3 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVFASVN*NWVFCQ
Trigger: TTGACAGAACACCCAATTCAAATTGACTGAAGCAAA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGTTAACCACAGGACTTaGGATCTCCCTATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAVNHRT*DLPMRA
Trigger: AGCCCTCATAGGGAGATCCAAAGTCCTGTGGTTAAC...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGTTAACCACAGGACTTaGGATCTCCCTATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSVNHRT*DLPMRA
Trigger: AGCCCTCATAGGGAGATCCAAAGTCCTGTGGTTAAC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATATAATCCCAGTATTTaGGGGACAGAGGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAYNPSI*GTEVGG
Trigger: TCCTCCCACCTCTGTCCCCAAAATACTGGGATTATA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 72 bp GGATTTAGGGTGGGAGAGTTTATCAGAGGCTTGGATTaGTTCTATGTCTCTTTGCTGTGCTTATCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: GFRVGEFIRGLD*FYVSLLCLSGR
Trigger: CCTCCCAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTCCCACCCTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 72 bp CTTTGCTCTTTCCTCAGTATCTCACCATCCTTCACTTaGCTTCACATGTCAGTTCTGCCAACTGGACAAGGA +
Preference number: 3 (lower is better)
Translates to: LCSFLSISPSFT*LHMSVLPTGQG
Trigger: TCCTTGTCCAGTTGGCAGAACTGACATGTGAAGGCAAGTGAAGGATGGTGAGATACTGAGGAAAGAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTTCAGTCAATTTGAATaGGGTGTTCTGTCAATGGCA +
Preference number: 3 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIFSQFE*GVLSMA
Trigger: TGCCATTGACAGAACACCCAATTCAAATTGACTGAA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCTCTCTCCTCATGCCTaGGGCCAGAGGAGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNLSPHA*GQRSKV
Trigger: CACTTTGCTCCTCTGGCCCAAGGCATGAGGAGAGAG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATTCGGCATGGGCTGGATaGCACTTCTGCTTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNSAWAG*HFCFCR
Trigger: CCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGA...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR TCA 72 bp TTAACATCTGTTTGGGAAACTAGTTCTTCCTCTCCTTaGTACGACTCGGCTTCCTTGTCTACAGGAGGTGTC +
Preference number: 3 (lower is better)
Translates to: LTSVWETSSSSP*YDSASLSTGGV
Trigger: GACACCTCCTGTAGACAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAACTAGTTTCCCAAACAGATGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
3UTR GCA 72 bp TTACGCACAAAGGAACTTAAGTCCTGCTATTTCTGTTaGAGTTACAACCGGAAGACCCTACCACCTAAAGGC +
Preference number: 3 (lower is better)
Translates to: LRTKELKSCYFC*SYNRKTLPPKG
Trigger: GCCTTTAGGTGGTAGGGTCTTCCGGTTGTAACTGCAACAGAAATAGCAGGACTTAAGTTCCTTTGTGCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 72 bp TCTTCAGATGATTACACAGAGACTGAATATACCAGCTaGCTTCCTCCACATGCCGAAAGGATACATAGCCTG +
Preference number: 3 (lower is better)
Translates to: SSDDYTETEYTS*LPPHAERIHSL
Trigger: CAGGCTATGTATCCTTTCGGCATGTGGAGGAAGGCAGCTGGTATATTCAGTCTCTGTGTAATCATCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR CCA 72 bp CTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTaGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATA +
Preference number: 3 (lower is better)
Translates to: LGLLLCLFAVLI*EGELCVRSHTI
Trigger: TATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTATAATCCCAGTATTTaGGGGACAGAGGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: NAQNLNEESIKASLQSHSYNPSI*GTEVGG
Trigger: TCCTCCCACCTCTGTCCCCAAAATACTGGGATTATA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTATAATCCCAGTATTTaGGGGACAGAGGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: TKATIQVFNNESFLARCGYNPSI*GTEVGG
Trigger: TCCTCCCACCTCTGTCCCCAAAATACTGGGATTATA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGTCCTGATTCAAGCTTaGCCTGAAGCCAGTGTTATC +
Preference number: 3 (lower is better)
Translates to: NAQNLNEESIKASLQSHSVLIQA*PEASVI
Trigger: GATAACACTGGCTTCAGGCAAAGCTTGAATCAGGAC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCCTGTATCTCTTCACCTaGGCAGGCCTGGATGAAAAA +
Preference number: 3 (lower is better)
Translates to: NAQNLNEESIKASLQSHSLYLFT*AGLDEK
Trigger: TTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACAG...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR TCA 72 bp ATGAAGGCGTTAACCACAGGACTTTGGATCTCCCTATaGGGGCTCACCTTTAAGGATTCAAAATACAGTTCC +
Preference number: 3 (lower is better)
Translates to: MKALTTGLWISL*GLTFKDSKYSS
Trigger: GGAACTGTATTTTGAATCCTTAAAGGTGAGCCCTCATAGGGAGATCCAAAGTCCTGTGGTTAACGCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTTCTTTGTTCCCTGTTaGTCCACTCTTCGACTCACA +
Preference number: 3 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLFFVPC*STLRLT
Trigger: TGTGAGTCGAAGAGTGGACAAACAGGGAACAAAGAA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR GCA 72 bp GGTGACGGAGTGACTCTGTCTCAAAGAAAAAGTACCTaGACAAACCAAAGCCAATTACTCTGTCTTCAGAAT +
Preference number: 3 (lower is better)
Translates to: GDGVTLSQRKST*TNQSQLLCLQN
Trigger: ATTCTGAAGACAGAGTAATTGGCTTTGGTTTGTGCAGGTACTTTTTCTTTGAGACAGAGTCACTCCGTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATGTTAACCACAGGACTTaGGATCTCCCTATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNVNHRT*DLPMRA
Trigger: AGCCCTCATAGGGAGATCCAAAGTCCTGTGGTTAAC...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGGAGTTTATCAGAGGCTaGGATTGCTTCTATGTCTCT +
Preference number: 3 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLEFIRG*DCFYVS
Trigger: AGAGACATAGAAGCAATCCAAGCCTCTGATAAACTC...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTTAGAGAAAACAAATTaGAAAGGGGCTTCTGGCCGA +
Preference number: 3 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLLEKTN*KGASGR
Trigger: TCGGCCAGAAGCCCCTTTCAAATTTGTTTTCTCTAA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR CCA 72 bp TTTAAGGATTTAGGGTGGGAGAGTTTATCAGAGGCTTaGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTG +
Preference number: 3 (lower is better)
Translates to: FKDLGWESLSEA*IASMSLCCAYL
Trigger: CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTCCCACCCTAAATCCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGAGATGTCTTCATGTCTaGGGACCAATTTCTTCAGAT +
Preference number: 3 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLRCLHV*GPISSD
Trigger: ATCTGAAGAAATTGGTCCCAAGACATGAAGACATCT...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
3UTR-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGTTCAGTCAATTTGAATaGGGTGTTCTGTCAATGGCA +
Preference number: 3 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVFSQFE*GVLSMA
Trigger: TGCCATTGACAGAACACCCAATTCAAATTGACTGAA...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGAAAGAAGTGATTTCCTaGAAATGCATGAGGCTAGAA +
Preference number: 3 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVKEVIS*KCMRLE
Trigger: TTCTAGCCTCATGCATTTCAAGGAAATCACTTCTTT...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATGAGTTTATCAGAGGCTaGGATTGCTTCTATGTCTCT +
Preference number: 3 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNEFIRG*DCFYVS
Trigger: AGAGACATAGAAGCAATCCAAGCCTCTGATAAACTC...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR GCA 72 bp TTTATATGCACCTCAGCACAGTTAGATTTAAATAGATaGACACATAGGACACATTCTTTTTCGTCTTCCCAA +
Preference number: 3 (lower is better)
Translates to: FICTSAQLDLNR*THRTHSFSSSQ
Trigger: TTGGGAAGACGAAAAAGAATGTGTCCTATGTGTGCATCTATTTAAATCTAACTGTGCTGAGGTGCATATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR CCA 72 bp TTTGCTTCAGTCAATTTGAATTGGGTGTTCTGTCAATaGCAACTGAAATGTTCCAACCCCAATATTGAATTT +
Preference number: 3 (lower is better)
Translates to: FASVNLNWVFCQ*QLKCSNPNIEF
Trigger: AAATTCAATATTGGGGTTGGAACATTTCAGTTGCCATTGACAGAACACCCAATTCAAATTGACTGAAGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGGCGGGAGGACAGCTTaGGCCTGGGAGGTCGAGACT +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVGGRTA*AWEVET
Trigger: AGTCTCGACCTCCCAGGCTCAAGCTGTCCTCCCGCC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGGGGGGTCGAGGTGTCTaGGCAGAGATGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VPRSEVSTLWLQNRKVVLGGRGV*AEMAVG
Trigger: GCCCACGGCCATCTCTGCGCAGACACCTCGACCCCC...CAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp CTGTGTCATGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTCCTCCACCTGCCGAATaGGGTTCAGGGCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LCHVLIACIVFRWAFAQPPPPAE*GSGQSR
Trigger: TCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGG...AGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp CCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAAGAACTAGGAAACGCTaGTCCACCTGCGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: PSCCRALSISGDVAGRQARTRKR*STCAWG
Trigger: CCCCCATGCGCAGGTGGAGCAGCGTTTCCTAGTTCT...TGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp GTTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATAAACCCTTTGTCGGGTaGGCAGCAGTCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: VQGRAEEQASPGSVSCPDKPFVG*AAVAPL
Trigger: AAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTT...ATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp GAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTTGCTCCACCTGCGCATaGGGGGTCGAGGTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: ESQGGAVKGGFRLAVGRCCSTCA*GVEVSA
Trigger: CGCAGACACCTCGACCCCCCATGCGCAGGTGGAGCA...ACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATGCATCTGCCAGCCCTaGGGACATCCGGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVCICQP*GHPAKR
Trigger: TCTCTTGGCCGGATGTCCTCAGGGCTGGCAGATGCA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTGTTGGTACAGTTGAGGTaGTGCAGCAGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRAEEQASPGSVSCPDCLLVQLR*CSSFFC
Trigger: GCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAA...CAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp AAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGCTGCAGGGAAGTGGGTaGCTGCTCAGGGTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KGGFRLAVGRCQSQAMWLLQGSG*LLRVQS
Trigger: GCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAG...CAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp GCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCAGGAATACTGTCCTaGAGGGAAGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AVGRCQSQAMWLEGRQKEAGILS*REVGAC
Trigger: GCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGC...TTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGGCTGCAGTGAACAGTaGTCCCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVGCSEQ*SHHCTP
Trigger: TGGAGTGCAGTGGTGGGATCACTGTTCACTGCAGCC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTGCGACCTTGAGATTTCATaGCCAGCCTTCAGATCAAGC +
Preference number: 4 (lower is better)
Translates to: AEPKSRPLPALCHVLIACDLEIS*PAFRSS
Trigger: GCTTGATCTGAAGGCTGGCCATGAAATCTCAAGGTC...GCAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp GTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTACTCCTTGCATCCCCCTaGAGACCAGGCTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VAAESQGGAVKGGFRLAVLLASP*RPGLVH
Trigger: GTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAG...TACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp TCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAACAGTCCCCGTCGGCATaGGCTGGATTGCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SQGGAVKGGFRLAVGRCQQSPSA*AGLHFC
Trigger: GCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTG...TTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp CAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTGCGCAGAGATGGCCGTaGGCAGGGAGGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGGAVKGGFRLAVGRCQSAQRWP*AGRLLR
Trigger: TCTCAGCAACCTCCCTGCCCACGGCCATCTCTGCGC...AGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGTCTCCCGAATGGGAATaGGGGCCTCATCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRSPEWE*GPHPKS
Trigger: ACTCTTCGGATGAGGCCCTCATTCCCATTCGGGAGA...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GAGGTTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EVQGRAEEQASPGSVSCPDIEEF*QEERVF
Trigger: GAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATC...AGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp GATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGCCAAGCTCCAGGTACAGTTGAGGTGCTaGAGCAGCTTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: DCLHSLQVGVCPAFAKLQVQLRC*SSFFCR
Trigger: ACGGCAGAAGAAGCTGCTGCAGCACCTCAACTGTAC...CTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp GGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCCTCTCCTGCATGCTTATTTTaGCAGGACTCCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: GRCQSQAMWLEGRQKEASPACLF*QDSCGK
Trigger: CTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGG...AGAGGCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGCCAGACATCCCCTCTaGCAAGAAGAGCCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVARHPL*QEEPSD
Trigger: ATCACTGGGCTCTTCTTGGCAGAGGGGATGTCTGGC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp TTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTCATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FRAEPKSRPLPALCHVLIHLRLS*TSPASC
Trigger: ACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATG...AATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp GTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCCTCTGGAAAGAAAACCCTTTGTCGGGTaGGCAGCAGTCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: VNLRRCGWKAGRRKPLERKPFVG*AAVAPL
Trigger: AAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTT...TCTTTCCAGAGGCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp GTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGCCCGTCGGCATGGGCTaGATTGCACTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPRSEVSTLWLQNRKVVLPVGMG*IALLLL
Trigger: CAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGG...CAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGACCTTAAAATGCACCTaGTCCCCAGGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRTLKCT*SPGQAQ
Trigger: CTGTGCCTGGCCTGGGGACCAGGTGCATTTTAAGGT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR CAA 72 bp GGGATGGGGGTCACAAGGTGCTCACTGGGGGAGCTTTaGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAA +
Preference number: 4 (lower is better)
Translates to: GMGVTRCSLGEL*SQDEPGEGISQ
Trigger: TTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAGCTCCCCCAGTGAGCACCTTGTGACCCCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
3UTR CAA 72 bp TGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTaGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CCKGRFPSCCRA*SISGDVAGRQA
Trigger: TGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp GCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAAGTTCTTCCTCTCCTTaGTACGACTCGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: AVGRCQSQAMWLEGRQKESSSSP*YDSASL
Trigger: CAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAACT...TTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTGGGCAGGGAGGTTGCTaGGATCTGTTTAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCGQGGC*DLFSTP
Trigger: TGGGGTGCTAAACAGATCTCAGCAACCTCCCTGCCC...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGGTGTTTGTCTAAGATaGCGGTGTTCCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVGVCLR*RCSCPV
Trigger: GACAGGGCAGGAACACCGTCATCTTAGACAAACACC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTGCAAAGAAGCTCCCATTTaGTTGGGAAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: AEPKSRPLPALCHVLIACKEAPI*LGRDFK
Trigger: CTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTT...GCAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp GGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTGACTCAGCAGATCCTCTaGCAAGAGATGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: GRAEEQASPGSVSCPDCLTQQIL*QEMFKN
Trigger: GTTTTTGAACATCTCTTGGCAGAGGATCTGCTGAGT...CAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGCAGGAATACTGTCCTaGAGGGAAGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWAGILS*REVGAC
Trigger: GCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTACAAGGAACCTTAAAATaGACCTGGTCCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVQGTLK*TWSPGQ
Trigger: CTGGCCTGGGGACCAGGTGCATTTTAAGGTTCCTTG...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCAAGCTCCCATTTGCTTaGGAAGAGACTTCAAGACTT +
Preference number: 4 (lower is better)
Translates to: RAEPKSRPLPALCHVLIAKLPFA*EETSRL
Trigger: AAGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTT...GGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp CGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGGACCTTGAGATTTCATaGCCAGCCTTCAGATCAAGC +
Preference number: 4 (lower is better)
Translates to: RLAVGRCQSQAMWLEGRQDLEIS*PAFRSS
Trigger: GCTTGATCTGAAGGCTGGCCATGAAATCTCAAGGTC...CTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGCCCGTCGGCATGGGCTaGATTGCACTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWPVGMG*IALLLL
Trigger: CAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGG...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCCAGTCCCCGTCGGCATaGGCTGGATTGCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIQSPSA*AGLHFC
Trigger: GCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTG...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATTTTGGGGACAGAGGTaGGAGGATCACTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVFWGQR*EDHLGL
Trigger: TAGGCCCAAGTGATCCTCCCACCTCTGTCCCCAAAA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTACCCTGTTGCCCAAGCTaGAGTGCAGTTGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVPCCPS*SAVVSS
Trigger: AGATGACACAACTGCACTCCAGCTTGGGCAACAGGG...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGAAGAGGAGCTACAGGTCATCTaGCGAGTTTCCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QMPKYLHLPNEVQGRAEEELQVI*RVSTVS
Trigger: GGAGACCGTGGAAACTCGCCAGATGACCTGTAGCTC...CTCTTCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp TCCCTCAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGTGCATAGTCTTCAGGTaGGCGTTTGCCCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SLKCLNTSTCRMRFRAEPCIVFR*AFAQPL
Trigger: CAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCA...CGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR TCA 90 bp TGTCATGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGCCTCTTTGGTACAGTTaGGGTGCTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CHVLIACIVFRWAFAQPLPLWYS*GAAAAS
Trigger: AGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGG...CAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAGTTCTTCCTCTCCTTaGTACGACTCGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVSSSSP*YDSASL
Trigger: CAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAACT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTTCTCCCGAATGGGAATaGGGGCCTCATCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCSPEWE*GPHPKS
Trigger: ACTCTTCGGATGAGGCCCTCATTCCCATTCGGGAGA...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp GATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGCCAAGCTCCAGGTAGAATCCTCTGTGTaGTCCAAGGTCCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DCLHSLQVGVCPAFAKLQVESSV*SKVQRS
Trigger: GCTTCTTTGGACCTTGGAGCACACAGAGGATTCTAC...CTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp ACAATGACACAGAGGCCTCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCGTACAGTTGAGGTGCTaGAGCAGCTTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TMTQRPLWFRFILYTAALVQLRC*SSFFCR
Trigger: ACGGCAGAAGAAGCTGCTGCAGCACCTCAACTGTAC...GAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR GCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGTTGGTACAGTTGAGGTaGTGCAGCAGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRLVQLR*CSSFFC
Trigger: GCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAA...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCGGAGACCAGGCTTGGTaGACCATTTGTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ARWCCKGRFPSCCRALSIGDQAW*TICGSV
Trigger: AACAGAGCCACAAATGGTGCACCAAGCCTGGTCTCC...GATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp CTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTTTAGCAGATGCTCCTTaGATCCCCCTGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: LNFVAAESQGGAVKGGFRLADAP*IPLETR
Trigger: CCTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAA...ACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp GTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGCTGGATTGCACTTCTaGTTCTGCAGGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: VAAESQGGAVKGGFRLAVAGLHF*FCRTIS
Trigger: GGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGC...TACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp AAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGAGGGTTCAGAGCATCTaGTTCGATGGATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGGFRLAVGRCQSQAMWLRVQSI*FDGYGR
Trigger: CCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCT...CAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAGGGTTCAGAGCATCTaGTTCGATGGATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVRVQSI*FDGYGR
Trigger: CCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTAGGGAAGTGGGTGCCTaGTCAGGGTTCAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: LNFVAAESQGGAVKGGFRREVGA*SGFRAS
Trigger: AGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCT...ACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGAGGGAAGTGGGTGCCTaGTCAGGGTTCAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWREVGA*SGFRAS
Trigger: AGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCGGGAGGTTTCCGTCTTaGTGTAGGGCGTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: ARWCCKGRFPSCCRALSIGRFPS*CRALSI
Trigger: GATTGACAACGCCCTACAGCAAGACGGAAACCTCCC...GATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp AAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGAGAATCGCAAGGTGGTaGTGTAAAGGGAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: KGGFRLAVGRCQSQAMWLRIARW*CKGRFP
Trigger: CGGAAACCTCCCTTTACAGCACCACCTTGCGATTCT...CAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCCAGCCTCTCTCCTCATaGCTTGGGCCAGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIQPLSS*LGPEEQ
Trigger: TTGCTCCTCTGGCCCAAGGCATGAGGAGAGAGGCTG...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGAAGCATGTCCTGATTGCCTaGATAGTCTTCAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LKCLNTSTCRMRFRAEPKHVLIA*IVFRWA
Trigger: CGCCCACCTGAAGACTATGCAGGCAATCAGGACATG...CTTCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGAAACCCTTTGTCGGGTaGGCAGCAGTCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWKPFVG*AAVAPL
Trigger: AAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGCAGTTGTGTCATCTTaGCTCACCACAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWAVVSS*LTTASA
Trigger: GGCAGAGGCTGTGGTGAGCCAAGATGACACAACTGC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp AGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCCTCTTTGGTACAGTTaGGGTGCTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RVPRSEVSTLWLQNRKVVPLWYS*GAAAAS
Trigger: AGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGG...CACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp CAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGAAGAGAGTTCTTCCTCTCCTTaGTACGACTCGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QMPKYLHLPNEVQGRAEESSSSP*YDSASL
Trigger: CAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAACT...CTCTTCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR TCA 90 bp AGGCCTCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCAGTTCTTCCTCTCCTTaGTACGACTCGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RPLWFRFILYTAALITTCSSSSP*YDSASL
Trigger: CAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAACT...GCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR TCA 90 bp AGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGAGCCACTGGAACACATaGCTCAGGATCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RIARWCCKGRFPSCCRALSHWNT*LRISAS
Trigger: AGATGCTGAGATCCTGAGTCATGTGTTCCAGTGGCT...CAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGAGGGTGGGTGGACTGTaGCCTCACTGTCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWRVGGL*PHCPMF
Trigger: AAACATTGGACAGTGAGGTCACAGTCCACCCACCCT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATGCATCTGCCAGCCCTaGGGACATCCGGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISACICQP*GHPAKR
Trigger: TCTCTTGGCCGGATGTCCTCAGGGCTGGCAGATGCA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGTAGAATCCTCTGTGTaGTCCAAGGTCCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVVESSV*SKVQRS
Trigger: GCTTCTTTGGACCTTGGAGCACACAGAGGATTCTAC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTGTACAGTTGAGGTGCTaGAGCAGCTTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LNFVAAESQGGAVKGGFRVQLRC*SSFFCR
Trigger: ACGGCAGAAGAAGCTGCTGCAGCACCTCAACTGTAC...ACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp TCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAACATCCTGTACACAGCTaGCCTCTTTGTGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SQGGAVKGGFRLAVGRCQHPVHS*PLCAGF
Trigger: GAAACCAGCACAAAGAGGGCAGCTGTGTACAGGATG...TTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAACTGAATATACCAGCTaGCTTCCTCCACATGCCGAA +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVTEYTS*LPPHAE
Trigger: TTCGGCATGTGGAGGAAGGCAGCTGGTATATTCAGT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGAGCTGGCCTTCTGCTaGGGTAGACATCACGAACCA +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIELAFC*GRHHEP
Trigger: TGGTTCGTGATGTCTACCGCAGCAGAAGGCCAGCTC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp TCCCTCAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGGTGTCATGTCCTGATTaGCTGCATAGTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLKCLNTSTCRMRFRAEPVSCPD*LHSLQV
Trigger: CACCTGAAGACTATGCAGGCAATCAGGACATGACAC...CGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAGGTTCTCCACATCTTaGACCCCCAGGTTTGAATCA +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVRFSTS*TPRFES
Trigger: TGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATCTCCAGCTTCTTGTTaGGGACCAATCCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVSPASC*GPILCR
Trigger: TCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp TCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTAAACCCTTTGTCGGGTaGGCAGCAGTCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: SVVPIHPVHSCPHYYLHAKPFVG*AAVAPL
Trigger: AAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTT...AGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp GTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: VAAESQGGAVKGGFRLAVTQRPL*FRFILY
Trigger: GTACAGGATGAATCGGAACCACAGAGGCCTCTGTGT...TACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp GTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCCTCTGGAAAGAGCTCCAAATCTCCCATaGGTCAGAATACAGAACACG +
Preference number: 4 (lower is better)
Translates to: VNLRRCGWKAGRRKPLERAPNLP*VRIQNT
Trigger: CGTGTTCTGTATTCTGACCCATGGGAGATTTGGAGC...TCTTTCCAGAGGCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCACCTTAAAATGCACCTaGTCCCCAGGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCITLKCT*SPGQAQ
Trigger: CTGTGCCTGGCCTGGGGACCAGGTGCATTTTAAGGT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGCCCTGTTGCCCAAGCTaGAGTGCAGTTGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWPCCPS*SAVVSS
Trigger: AGATGACACAACTGCACTCCAGCTTGGGCAACAGGG...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGTAGCAGTAACAAGGTaGGGACTGTCCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWVAVTR*GLSTAV
Trigger: GACTGCAGTGGACAGTCCCCACCTTGTTACTGCTAC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATTTGCTGTGCTTATCTaGGAGGGAGAGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVFAVLI*EGELCV
Trigger: GACACACAACTCTCCCTCCCAGATAAGCACAGCAAA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGAAGAGGCTTCTTCTGCCGTATaGTATAGAGGAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QMPKYLHLPNEVQGRAEEASSAV*YRGVLP
Trigger: TGGCAGAACTCCTCTATATCATACGGCAGAAGAAGC...CTCTTCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR TCA 90 bp GAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTTGTGTATATGCACTGTaGACCCAAGCCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: ESQGGAVKGGFRLAVGRCCVYAL*TQATGT
Trigger: TGTTCCAGTGGCTTGGGTTCACAGTGCATATACACA...ACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTGCAGGGCTGTGAAGTaGGACATGATCTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCICRAVK*DMISRM
Trigger: CATTCGGGAGATCATGTCTCACTTCACAGCCCTGCA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGGCGGGAGGACAGCTTaGGCCTGGGAGGTCGAGACT +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVGGRTA*AWEVET
Trigger: AGTCTCGACCTCCCAGGCTCAAGCTGTCCTCCCGCC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTTGGGCCTAGGAGTTTaGAACCAGCCTGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWLGLGV*NQPVQQ
Trigger: TTGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGCCCAGGTGACGGAGTaGCTCTGTCTCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWAQVTE*LCLKEK
Trigger: TTTTTCTTTGAGACAGAGTCACTCCGTCACCTGGGC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVDIEEF*QEERVF
Trigger: GAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGTACAGTTGAGGTGCTaGAGCAGCTTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIVQLRC*SSFFCR
Trigger: ACGGCAGAAGAAGCTGCTGCAGCACCTCAACTGTAC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTTTGGTACAGTTGAGGTaGTGCAGCAGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCLVQLR*CSSFFC
Trigger: GCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAA...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTTGGTACAGTTGAGGTaGTGCAGCAGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWLVQLR*CSSFFC
Trigger: GCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGCCAAGCTCCAGAGTTCTCTGAGTCAATaGCTTCTGACAGTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: DCLHSLQVGVCPAFAKLQSSLSQ*LLTVRR
Trigger: TCTACGAACTGTCAGAAGGCATTGACTCAGAGAACT...CTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGAGGGTTCAGAGCATCTaGTTCGATGGATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWRVQSI*FDGYGR
Trigger: CCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGACTGAATATACCAGCTaGCTTCCTCCACATGCCGAA +
Preference number: 4 (lower is better)
Translates to: VPRSEVSTLWLQNRKVVLTEYTS*LPPHAE
Trigger: TTCGGCATGTGGAGGAAGGCAGCTGGTATATTCAGT...CAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp AAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGAAGGGAACAGAAGAGTaGCACGTTCAGAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: KGGFRLAVGRCQSQAMWLKGTEE*HVQKSQ
Trigger: TTGAGACTTCTGAACGTGGCACTCTTCTGTTCCCTT...CAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp TGTCATGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGAGGTTCTCCACATCTTaGACCCCCAGGTTTGAATCA +
Preference number: 4 (lower is better)
Translates to: CHVLIACIVFRWAFAQPLRFSTS*TPRFES
Trigger: TGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCT...CAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp CAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGAAGAGTCTCCAGCTTCTTGTTaGGGACCAATCCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: QMPKYLHLPNEVQGRAEESPASC*GPILCR
Trigger: TCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGA...CTCTTCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTCATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCHLRLS*TSPASC
Trigger: ACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATG...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp TTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGACCTGGAGACCAGGCTTaGTGCACCATTTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FRSLNFVAAESQGGAVKGPGDQA*CTICGS
Trigger: AGAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGG...TCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCACCCGTCGGCATGGGCTaGATTGCACTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAPVGMG*IALLLL
Trigger: CAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGG...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCCTCTGGAAAGATCACCTTGGCAGGCCTaGATGAAAAAGAGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: VNLRRCGWKAGRRKPLERSPWQA*MKKSLG
Trigger: ACCTAAACTCTTTTTCATCCAGGCCTGCCAAGGTGA...TCTTTCCAGAGGCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGATACATAGCCTaGGACAGTGGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCKGYIA*DSGQTK
Trigger: CTTGGTCTGGCCACTGTCCCAGGCTATGTATCCTTT...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGAAAGGATACATAGCCTaGGACAGTGGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWKGYIA*DSGQTK
Trigger: CTTGGTCTGGCCACTGTCCCAGGCTATGTATCCTTT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGCAGAAGGAAGCCTCTaGAAAGAACTAGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: VAAESQGGAVKGGFRLAVAEGSL*KELGNA
Trigger: AGCGTTTCCTAGTTCTTTCCAGAGGCTTCCTTCTGC...TACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGAAAGTTAGCTGTGCATaGACACACACCTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRKVSCA*THTCSL
Trigger: GAGACTACAGGTGTGTGTCCATGCACAGCTAACTTT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGGCTCATTGTTTTCCTaGAACCCATTGTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVGSLFS*NPLYEG
Trigger: GCCTTCATACAATGGGTTCCAGGAAAACAATGAGCC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAAAGAAACATGAAAGGTaGCTTGACAGCCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVKKHER*LDSQGQ
Trigger: CTGTCCTTGGCTGTCAAGCCACCTTTCATGTTTCTT...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp TCCCTCAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGTTGGACCCCCAGGTTTaGATCAATAATCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLKCLNTSTCRMRFRAEPLDPQV*INNQKL
Trigger: AAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAA...CGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR TCA 90 bp CAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTGCTTCTTCTGCCGTATaGTATAGAGGAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QGGAVKGGFRLAVGRCQSASSAV*YRGVLP
Trigger: TGGCAGAACTCCTCTATATCATACGGCAGAAGAAGC...AGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp TTCTTCCTCTCCTTGATACGACTCGGCTTCCTTGTCTACAGGAGGTGTCACTATCCTCTTTGGTACAGTTaGGGTGCTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FFLSLIRLGFLVYRRCHYPLWYS*GAAAAS
Trigger: AGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGG...ATAGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR TCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCTCTCCCGAATGGGAATaGGGGCCTCATCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTSPEWE*GPHPKS
Trigger: ACTCTTCGGATGAGGCCCTCATTCCCATTCGGGAGA...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR TCA 90 bp TTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGATGCAGGGCTGTGAAGTaGGACATGATCTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: FRSLNFVAAESQGGAVKGCRAVK*DMISRM
Trigger: CATTCGGGAGATCATGTCTCACTTCACAGCCCTGCA...TCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCAGGTCAAGGCTGCAGTaGACAGTGATCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTRSRLQ*TVIPPL
Trigger: CAGTGGTGGGATCACTGTTCACTGCAGCCTTGACCT...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTGCATCTGCCAGCCCTaGGGACATCCGGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSCICQP*GHPAKR
Trigger: TCTCTTGGCCGGATGTCCTCAGGGCTGGCAGATGCA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGCTTTGGATCTCCCTATaGGGGCTCACCTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWLWISL*GLTFKD
Trigger: ATCCTTAAAGGTGAGCCCTCATAGGGAGATCCAAAG...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTGTAGAATCCTCTGTGTaGTCCAAGGTCCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCVESSV*SKVQRS
Trigger: GCTTCTTTGGACCTTGGAGCACACAGAGGATTCTAC...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGTAGAATCCTCTGTGTaGTCCAAGGTCCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWVESSV*SKVQRS
Trigger: GCTTCTTTGGACCTTGGAGCACACAGAGGATTCTAC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VPRSEVSTLWLQNRKVVLDIEEF*QEERVF
Trigger: GAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATC...CAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp CTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTTTTGGTACAGTTGAGGTaGTGCAGCAGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LWFRFILYTAALITTCMLLVQLR*CSSFFC
Trigger: GCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAA...AAGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR GCA 90 bp TCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTCCTGCATGCTTATTTTaGCAGGACTCCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: SVVPIHPVHSCPHYYLHAPACLF*QDSCGK
Trigger: CTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGG...AGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR GCA 90 bp GTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTACCATTACTACCTGCATaGTTATTTTGCCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: VAAESQGGAVKGGFRLAVPLLPA*LFCQDS
Trigger: GGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGG...TACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGGAGACCAGGCTTGGTaGACCATTTGTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPGDQAW*TICGSV
Trigger: AACAGAGCCACAAATGGTGCACCAAGCCTGGTCTCC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR GCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTCAGCTGCCCTCTTTGTaGTGGTTTCAGAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCQLPSL*WFQSLE
Trigger: CTCTAAACTCTGAAACCAGCACAAAGAGGGCAGCTG...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGCAGCTGCCCTCTTTGTaGTGGTTTCAGAGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWQLPSL*WFQSLE
Trigger: CTCTAAACTCTGAAACCAGCACAAAGAGGGCAGCTG...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR GCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAAGGGAAGTGGGTGCCTaGTCAGGGTTCAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSREVGA*SGFRAS
Trigger: AGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGTGGGGACTGTCCACTaGAGTCTACTGCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSVGTVH*SLLHLP
Trigger: TGGCAGATGCAGTAGACTGCAGTGGACAGTCCCCAC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGATCAGAGGCTTGGATTaGTTCTATGTCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRIRGLD*FYVSLL
Trigger: CAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGAT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGAAGCTCCCATTTGCTTaGGAAGAGACTTCAAGACTT +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRKLPFA*EETSRL
Trigger: AAGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGAGGTTCTCCACATCTTaGACCCCCAGGTTTGAATCA +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWRFSTS*TPRFES
Trigger: TGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTTCTCCAGCTTCTTGTTaGGGACCAATCCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: QGGAVKGGFRLAVGRCQSSPASC*GPILCR
Trigger: TCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGA...AGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGCTCCTTGCATCCCCCTaGAGACCAGGCTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLLLASP*RPGLVH
Trigger: GTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAG...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CCA 90 bp TCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAACTGCCCTCTTTGTGCTaGTTTCAGAGTTTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: SQGGAVKGGFRLAVGRCQLPSLC*FQSLEC
Trigger: ACACTCTAAACTCTGAAACCAGCACAAAGAGGGCAG...TTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCITQRPL*FRFILY
Trigger: GTACAGGATGAATCGGAACCACAGAGGCCTCTGTGT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAAGGGAGGTAAAGCTGTaGTTGTTGACAATGACACAG +
Preference number: 4 (lower is better)
Translates to: VAAESQGGAVKGGFRLAVREVKL*LLTMTQ
Trigger: CTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT...TACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTCAGTCCCCGTCGGCATaGGCTGGATTGCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGQSPSA*AGLHFC
Trigger: GCAGAAGTGCAATCCAGCCCATGCCGACGGGGACTG...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp TCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATGTATCTCTTCACCTTaGCAGGCCTGGATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SQGGAVKGGFRLAVGRCQCISSP*QAWMKK
Trigger: CTTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACA...TTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAAAAATCCGGGCACGGTaGTACACACCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAKIRAR*YTPVVP
Trigger: TGGGACCACAGGTGTGTACCACCGTGCCCGGATTTT...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGTGATCTGCCTGCCTTaGCTTCCCAGAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSVICLP*LPRVLG
Trigger: TCCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCAC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGCAGTTGTGTCATCTTaGCTCACCACAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSAVVSS*LTTASA
Trigger: GGCAGAGGCTGTGGTGAGCCAAGATGACACAACTGC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGTAGCAGTAACAAGGTaGGGACTGTCCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPVAVTR*GLSTAV
Trigger: GACTGCAGTGGACAGTCCCCACCTTGTTACTGCTAC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGACTCTCTTCTCTTTCTaGCTGCTCGCTGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRTLFSF*LLAVRK
Trigger: TTTTCTAACAGCGAGCAGCCAGAAAGAGAAGAGAGT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGCTTCTTCTGCCGTATaGTATAGAGGAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIASSAV*YRGVLP
Trigger: TGGCAGAACTCCTCTATATCATACGGCAGAAGAAGC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp TCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTGCTTCTTCTGCCGTATaGTATAGAGGAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SVVPIHPVHSCPHYYLHAASSAV*YRGVLP
Trigger: TGGCAGAACTCCTCTATATCATACGGCAGAAGAAGC...AGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCACCTCTTTGGTACAGTTaGGGTGCTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAPLWYS*GAAAAS
Trigger: AGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGG...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTTTCTCTTCCTGCCCCTaGTTTCCATTGTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QGGAVKGGFRLAVGRCQSFSSCP*FPLSFP
Trigger: TGGAAAAGACAATGGAAATCAGGGGCAGGAAGAGAA...AGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGGCTGCAGTGAACAGTaGTCCCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSGCSEQ*SHHCTP
Trigger: TGGAGTGCAGTGGTGGGATCACTGTTCACTGCAGCC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCAACAGCTTCAGTTTCTaGCACAGCCTCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCINSFSF*HSLSPH
Trigger: ATGAGGAGAGAGGCTGTGTCAGAAACTGAAGCTGTT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGGTGTTTGTCTAAGATaGCGGTGTTCCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAGVCLR*RCSCPV
Trigger: GACAGGGCAGGAACACCGTCATCTTAGACAAACACC...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAAGGTCACAAGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPRSQGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCTTGTGACCT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp TCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAAAAAGAAGCTCCCATTTaGTTGGGAAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: SQGGAVKGGFRLAVGRCQKEAPI*LGRDFK
Trigger: CTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTT...TTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp TCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAAACTCAGCAGATCCTCTaGCAAGAGATGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SQGGAVKGGFRLAVGRCQTQQIL*QEMFKN
Trigger: GTTTTTGAACATCTCTTGGCAGAGGATCTGCTGAGT...TTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp ACAATGACACAGAGGCCTCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCACTCAGCAGATCCTCTaGCAAGAGATGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: TMTQRPLWFRFILYTAALTQQIL*QEMFKN
Trigger: GTTTTTGAACATCTCTTGGCAGAGGATCTGCTGAGT...GAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWDIEEF*QEERVF
Trigger: GAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ACACAGAGGCCTCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TQRPLWFRFILYTAALITDIEEF*QEERVF
Trigger: GAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATC...AGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGCCATTACTACCTGCATaGTTATTTTGCCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWPLLPA*LFCQDS
Trigger: GGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGG...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR GCA 90 bp GTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCCTCTGGAAAGAACATTATTGTGTATATaGACTGTGAACCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VNLRRCGWKAGRRKPLERTLLCI*TVNPSH
Trigger: GTGGCTTGGGTTCACAGTGCATATACACAATAATGT...TCTTTCCAGAGGCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGCTGCAGGGAAGTGGGTaGCTGCTCAGGGTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVLQGSG*LLRVQS
Trigger: GCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAG...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGCAGGAATACTGTCCTaGAGGGAAGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGAGILS*REVGAC
Trigger: GCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTTTGAAACCAGCCTGTaGAACAAAGTGAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWFETSL*NKVRSL
Trigger: GAGGGATCTCACTTTGTTGCACAGGCTGGTTTCAAA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCACAAGGAACCTTAAAATaGACCTGGTCCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSQGTLK*TWSPGQ
Trigger: CTGGCCTGGGGACCAGGTGCATTTTAAGGTTCCTTG...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTCACCACAGCCTCTaGCTCCTGGATTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAAHHSL*LLDSRD
Trigger: ATCTCTTGAATCCAGGAGGCAGAGGCTGTGGTGAGC...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCGCTCACCACAGCCTCTaGCTCCTGGATTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTAHHSL*LLDSRD
Trigger: ATCTCTTGAATCCAGGAGGCAGAGGCTGTGGTGAGC...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR GCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCACAAGAGCTGGCCTTCTaGTGCGGTAGACATCACGAA +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSQELAF*CGRHHE
Trigger: TTCGTGATGTCTACCGCAGCAGAAGGCCAGCTCTTG...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTTTCTCCAGCTTCTTGTTaGGGACCAATCCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: LWFRFILYTAALITTCMLSPASC*GPILCR
Trigger: TCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGA...AAGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCACATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPHLRLS*TSPASC
Trigger: ACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATG...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp TCATTACTACCTGCATGCTTATTTTGCCAGGACTCCTGCGGTAAGGCTTCCAAGCATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLLPACLFCQDSCGKASKHLRLS*TSPASC
Trigger: ACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATG...CTTGGAAGCCTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGAGGTCATTTCAGTTTTaGGAAGCGAGTCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRRSFQF*EASLSE
Trigger: TTCTGAAAGACTCGCTTCCCAAAACTGAAATGACCT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CTGTGTCATGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTAGGTCATTTCAGTTTTaGGAAGCGAGTCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LCHVLIACIVFRWAFAQPRSFQF*EASLSE
Trigger: TTCTGAAAGACTCGCTTCCCAAAACTGAAATGACCT...AGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CCA 90 bp GCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTTGGTGCACCATTTGTaGCTCTGTTACCATTACTAC +
Preference number: 4 (lower is better)
Translates to: ARWCCKGRFPSCCRALSILVHHL*LCYHYY
Trigger: GTAGTAATGGTAACAGAGCCACAAATGGTGCACCAA...GATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPTQRPL*FRFILY
Trigger: GTACAGGATGAATCGGAACCACAGAGGCCTCTGTGT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTATCTCAGCATCTTTATaGGTTCCTTGTCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ESQGGAVKGGFRLAVGRCISASL*VPCLSF
Trigger: GAAGGACAGACAAGGAACCCATAAAGATGCTGAGAT...ACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTCCCGTCGGCATGGGCTaGATTGCACTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGPVGMG*IALLLL
Trigger: CAGAAGCAGAAGTGCAATCCAGCCCATGCCGACGGG...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGCTCCAAATCTCCCATaGGTCAGAATACAGAACACG +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIAPNLP*VRIQNT
Trigger: CGTGTTCTGTATTCTGACCCATGGGAGATTTGGAGC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTGTATCTCTTCACCTTaGCAGGCCTGGATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWCISSP*QAWMKK
Trigger: CTTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGCACAAAAGCAGGAAATaGGCCTGGCATAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWHKSRK*AWHRPN
Trigger: ATTTGGTCTATGCCAGGCCCATTTCCTGCTTTTGTG...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCGTAGCAGTAACAAGGTaGGGACTGTCCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTVAVTR*GLSTAV
Trigger: GACTGCAGTGGACAGTCCCCACCTTGTTACTGCTAC...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGCATTCCAGTTCACCTaGCTGAAGTCAAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWAFQFT*LKSNPV
Trigger: TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGTATGAAGGCAAAGTTTaGCAGTTACCCAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRYEGKV*QLPKRL
Trigger: AAGTCTCTTGGGTAACTGCCAAACTTTGCCTTCATA...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSYDGLA*AQRPDR
Trigger: CCTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGTCTGGCTGGCAGGGATaGGGGTCACAAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVSGWQG*GSQGAH
Trigger: GTGAGCACCTTGTGACCCCCATCCCTGCCAGCCAGA...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGGGGTTGTTCTCTGGCTaGCAGGGATGGGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLGLFSG*QGWGSQ
Trigger: TTGTGACCCCCATCCCTGCCAGCCAGAGAACAACCC...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGGGTTGTTCTCTGGCTaGCAGGGATGGGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSGLFSG*QGWGSQ
Trigger: TTGTGACCCCCATCCCTGCCAGCCAGAGAACAACCC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp AGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGTTGGACCCCCAGGTTTaGATCAATAATCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: RVPRSEVSTLWLQNRKVVLDPQV*INNQKL
Trigger: AAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAA...CACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR TCA 90 bp ACACAGAGGCCTCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTTTGGACCCCCAGGTTTaGATCAATAATCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: TQRPLWFRFILYTAALITLDPQV*INNQKL
Trigger: AAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAA...AGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR TCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATTCCTGTTTCTAGAATaGCAGGTGGAGACCACCGAT +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPFLFLE*QVETTD
Trigger: ATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGGCTGCAGTGAACAGTaGTCCCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVGCSEQ*SHHCTP
Trigger: TGGAGTGCAGTGGTGGGATCACTGTTCACTGCAGCC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTAGGTCAAGGCTGCAGTaGACAGTGATCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGRSRLQ*TVIPPL
Trigger: CAGTGGTGGGATCACTGTTCACTGCAGCCTTGACCT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGCAGCTGAGTGTAAATaGGCCATCATCTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPAAECK*AIIFLQ
Trigger: CTGTAGGAAGATGATGGCTCATTTACACTCAGCTGC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTACATTCACATATCAAATaGAACACTCCTAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVHSHIK*NTPNAL
Trigger: AAGGGCATTAGGAGTGTTTCATTTGATATGTGAATG...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGGAAATGCAGGGCTTTaGTCTCCAGATCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSGNAGL*SPDPLL
Trigger: GAGCAAAGGATCTGGAGATCAAAGCCCTGCATTTCC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAAGGTCACAAGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSRSQGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCTTGTGACCT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGACTCAGCAGATCCTCTaGCAAGAGATGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWTQQIL*QEMFKN
Trigger: GTTTTTGAACATCTCTTGGCAGAGGATCTGCTGAGT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp AGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGAGTTCTCTGAGTCAATaGCTTCTGACAGTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: RVPRSEVSTLWLQNRKVVSSLSQ*LLTVRR
Trigger: TCTACGAACTGTCAGAAGGCATTGACTCAGAGAACT...CACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCACCTGCATGCTTATTTTaGCAGGACTCCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAPACLF*QDSCGK
Trigger: CTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGG...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTTAGCAGATGCTCCTTaGATCCCCCTGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSLADAP*IPLETR
Trigger: CCTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATACTGCAGGGAAGTGGGTaGCTGCTCAGGGTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSILQGSG*LLRVQS
Trigger: GCTCTGAACCCTGAGCAGGCACCCACTTCCCTGCAG...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGCAGGAATACTGTCCTaGAGGGAAGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVAGILS*REVGAC
Trigger: GCAGGCACCCACTTCCCTGCAGGACAGTATTCCTGC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTTTGAAACCAGCCTGTaGAACAAAGTGAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIFETSL*NKVRSL
Trigger: GAGGGATCTCACTTTGTTGCACAGGCTGGTTTCAAA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGTGGGGACTGTCCACTaGAGTCTACTGCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGVGTVH*SLLHLP
Trigger: TGGCAGATGCAGTAGACTGCAGTGGACAGTCCCCAC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGCCAGACATCCCCTCTaGCAAGAAGAGCCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGARHPL*QEEPSD
Trigger: ATCACTGGGCTCTTCTTGGCAGAGGGGATGTCTGGC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTCTTCTCTTTCTGGCTaGTCGCTGTTAGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWSSLSG*SLLEKK
Trigger: CTTCTTTTCTAACAGCGAGCAGCCAGAAAGAGAAGA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTAAGCTCCCATTTGCTTaGGAAGAGACTTCAAGACTT +
Preference number: 4 (lower is better)
Translates to: LNFVAAESQGGAVKGGFRKLPFA*EETSRL
Trigger: AAGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTT...ACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGATCTCAGCATCTTTATaGGTTCCTTGTCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWISASL*VPCLSF
Trigger: GAAGGACAGACAAGGAACCCATAAAGATGCTGAGAT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTGTATCTCTTCACCTTaGCAGGCCTGGATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCICISSP*QAWMKK
Trigger: CTTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTAAAATCCGGGCACGGTaGTACACACCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGKIRAR*YTPVVP
Trigger: TGGGACCACAGGTGTGTACCACCGTGCCCGGATTTT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCAAAGTTAGCTGTGCATaGACACACACCTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIKVSCA*THTCSL
Trigger: GAGACTACAGGTGTGTGTCCATGCACAGCTAACTTT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGGTGATCTGCCTGCCTTaGCTTCCCAGAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLVICLP*LPRVLG
Trigger: TCCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCAC...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGCAGTTGTGTCATCTTaGCTCACCACAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSAVVSS*LTTASA
Trigger: GGCAGAGGCTGTGGTGAGCCAAGATGACACAACTGC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGTCAGTTCTGCCAACTaGACAAGGACTGTGACCACT +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSVSSAN*TRTVTT
Trigger: AGTGGTCACAGTCCTTGTCCAGTTGGCAGAACTGAC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCATCTGGCTGGCAGGGATaGGGGTCACAAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPSGWQG*GSQGAH
Trigger: GTGAGCACCTTGTGACCCCCATCCCTGCCAGCCAGA...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAAAGGGGGTTGTTCTCTaGCTGGCAGGGATGGGGGTC +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPKGVVL*LAGMGV
Trigger: GACCCCCATCCCTGCCAGCCAGAGAACAACCCCCTT...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCGCTTCTTCTGCCGTATaGTATAGAGGAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTASSAV*YRGVLP
Trigger: TGGCAGAACTCCTCTATATCATACGGCAGAAGAAGC...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTCCTCTTTGGTACAGTTaGGGTGCTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGPLWYS*GAAAAS
Trigger: AGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGG...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGCCTCTTTGGTACAGTTaGGGTGCTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLPLWYS*GAAAAS
Trigger: AGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGG...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATGTGTATATGCACTGTaGACCCAAGCCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSCVYAL*TQATGT
Trigger: TGTTCCAGTGGCTTGGGTTCACAGTGCATATACACA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATGTGTATATGCACTGTaGACCCAAGCCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISACVYAL*TQATGT
Trigger: TGTTCCAGTGGCTTGGGTTCACAGTGCATATACACA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCTCTCCCGAATGGGAATaGGGGCCTCATCCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGSPEWE*GPHPKS
Trigger: ACTCTTCGGATGAGGCCCTCATTCCCATTCGGGAGA...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTGCAGGGCTGTGAAGTaGGACATGATCTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGCRAVK*DMISRM
Trigger: CATTCGGGAGATCATGTCTCACTTCACAGCCCTGCA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTGCAGGGCTGTGAAGTaGGACATGATCTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLCRAVK*DMISRM
Trigger: CATTCGGGAGATCATGTCTCACTTCACAGCCCTGCA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTAGGGTGGGTGGACTGTaGCCTCACTGTCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGRVGGL*PHCPMF
Trigger: AAACATTGGACAGTGAGGTCACAGTCCACCCACCCT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTCTGTCAATGGCAACTaGAATGTTCCAACCCCAATA +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCISVNGN*NVPTPI
Trigger: TATTGGGGTTGGAACATTTCAGTTGCCATTGACAGA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGATTCAAGCTTTGCCTaGAGCCAGTGTTATCCACTC +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISADSSFA*SQCYPL
Trigger: GAGTGGATAACACTGGCTTCAGGCAAAGCTTGAATC...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCAAATGCAGGCACCACTaGGAGTTGTTGTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIKCRHH*ELLFFI
Trigger: AATGAAGAACAACAACTCTCAGTGGTGCCTGCATTT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCACTGGACAAGGACTGTaGCCACTAGCTTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSTGQGL*PLAFGP
Trigger: AGGGCCAAAAGCTAGTGGTCACAGTCCTTGTCCAGT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGCGAAAAGAAAGTCAGTaGAGGGAGATAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLRKESQ*REIGVG
Trigger: CCCCACCCCTATCTCCCTTCACTGACTTTCTTTTCG...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTTAAAGAAGCTCCCATTTaGTTGGGAAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: LWFRFILYTAALITTCMLKEAPI*LGRDFK
Trigger: CTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTT...AAGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGTACAGTTGAGGTGCTaGAGCAGCTTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSVQLRC*SSFFCR
Trigger: ACGGCAGAAGAAGCTGCTGCAGCACCTCAACTGTAC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTGTTACCATTACTACCTaGATGCTTATTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCVTITT*MLILPG
Trigger: TCCTGGCAAAATAAGCATGCAGGTAGTAATGGTAAC...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGCTGGATTGCACTTCTaGTTCTGCAGGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSAGLHF*FCRTIS
Trigger: GGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGCAAAGAAAAAGTACCTaGACAAACCAAAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRQRKST*TNQSQL
Trigger: TAATTGGCTTTGGTTTGTGCAGGTACTTTTTCTTTG...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTACAAAGAAAAAGTACCTaGACAAACCAAAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVQRKST*TNQSQL
Trigger: TAATTGGCTTTGGTTTGTGCAGGTACTTTTTCTTTG...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCCAATGTTTAAGGGCATaGAGAGGGGACACAGAATTA +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIQCLRA*RGDTEL
Trigger: TAATTCTGTGTCCCCTCTGCATGCCCTTAAACATTG...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTGTAAAGTTTCTGCTTaGAGAGCAGCTGAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWCKVSA*RAAECK
Trigger: TTTACACTCAGCTGCTCTGCAAGCAGAAACTTTACA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGTGGGGACTGTCCACTaGAGTCTACTGCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVVGTVH*SLLHLP
Trigger: TGGCAGATGCAGTAGACTGCAGTGGACAGTCCCCAC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATACAGCCTCTCTCCTCATaGCTTGGGCCAGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIQPLSS*LGPEEQ
Trigger: TTGCTCCTCTGGCCCAAGGCATGAGGAGAGAGGCTG...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCGAGCTGGCCTTCTGCTaGGGTAGACATCACGAACCA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGELAFC*GRHHEP
Trigger: TGGTTCGTGATGTCTACCGCAGCAGAAGGCCAGCTC...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGCCCTCATTACTACCTaGATGCTTATTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPALITT*MLILPG
Trigger: TCCTGGCAAAATAAGCATGCAGGTAGTAATGAGGGC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTCCTTGATACGACTCGGCTTCCTTGTCTACAGGAGGTGTCACTATCTGGATAAGCTCCCATTTGCTTaGGAAGAGACTTCAAGACTT +
Preference number: 4 (lower is better)
Translates to: LSLIRLGFLVYRRCHYLDKLPFA*EETSRL
Trigger: AAGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTT...ATCCAGATAGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTATCAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp CAGGACTCCTGCGGTAAGGCTTCCAAGAATGTCTTAACATCTGTTTGGGAAACTGACCTTGAGATTTCATaGCCAGCCTTCAGATCAAGC +
Preference number: 4 (lower is better)
Translates to: QDSCGKASKNVLTSVWETDLEIS*PAFRSS
Trigger: GCTTGATCTGAAGGCTGGCCATGAAATCTCAAGGTC...AGTTTCCCAAACAGATGTTAAGACATTCTTGGAAGCCTTACCGCAGGAGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATCTCCAGCTTCTTGTTaGGGACCAATCCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSSPASC*GPILCR
Trigger: TCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATCTCCAGCTTCTTGTTaGGGACCAATCCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISASPASC*GPILCR
Trigger: TCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAAACCCTTTGTCGGGTaGGCAGCAGTCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGKPFVG*AAVAPL
Trigger: AAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGCTCCAAATCTCCCATaGGTCAGAATACAGAACACG +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSAPNLP*VRIQNT
Trigger: CGTGTTCTGTATTCTGACCCATGGGAGATTTGGAGC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp TCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAAAAATTTCAGCATCCTTaGGACCAATTTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: SQGGAVKGGFRLAVGRCQKFQHP*DQFLQM
Trigger: CATCTGAAGAAATTGGTCCCAAGGATGCTGAAATTT...TTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGATGTCTTCATGTCTTaGGACCAATTTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWDVFMS*DQFLQM
Trigger: CATCTGAAGAAATTGGTCCCAAGACATGAAGACATC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAAAATCCGGGCACGGTaGTACACACCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGKIRAR*YTPVVP
Trigger: TGGGACCACAGGTGTGTACCACCGTGCCCGGATTTT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTAGATCAGAGAGAGGGTaGGTGGACTGTGACCTCACT +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGRSERG*VDCDLT
Trigger: AGTGAGGTCACAGTCCACCCACCCTCTCTCTGATCT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGTGATCTGCCTGCCTTaGCTTCCCAGAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVVICLP*LPRVLG
Trigger: TCCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCAC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCACTAGAAACGAACCCGTaGAAGCCACAAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISALETNP*KPQSAS
Trigger: TGAAGCACTTTGTGGCTTCCACGGGTTCGTTTCTAG...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCAGCCACTGGAACACATaGCTCAGGATCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSSHWNT*LRISAS
Trigger: AGATGCTGAGATCCTGAGTCATGTGTTCCAGTGGCT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATCTGTCAATGGCAACTaGAATGTTCCAACCCCAATA +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPSVNGN*NVPTPI
Trigger: TATTGGGGTTGGAACATTTCAGTTGCCATTGACAGA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAAGCATTTTGTCCAACTaGACTCAGAGTCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISASILSN*TQSQEL
Trigger: CAGCTCTTGACTCTGAGTTCAGTTGGACAAAATGCT...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGCGAAAAGAAAGTCAGTaGAGGGAGATAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVRKESQ*REIGVG
Trigger: CCCCACCCCTATCTCCCTTCACTGACTTTCTTTTCG...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTGCTGGTTGTTTAAGTaGAAACTGAATCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCICWLFK*KLNLQD
Trigger: GTCCTGAAGATTCAGTTTTCACTTAAACAACCAGCA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR GCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAAAAGAAGCTCCCATTTaGTTGGGAAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPKEAPI*LGRDFK
Trigger: CTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCACATTATTGTGTATATaGACTGTGAACCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCITLLCI*TVNPSH
Trigger: GTGGCTTGGGTTCACAGTGCATATACACAATAATGT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCGCTGGATTGCACTTCTaGTTCTGCAGGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGAGLHF*FCRTIS
Trigger: GGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGC...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGCTGGATTGCACTTCTaGTTCTGCAGGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVAGLHF*FCRTIS
Trigger: GGAGATGGTCCTGCAGAAGCAGAAGTGCAATCCAGC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGGGAAGTGGGTGCCTaGTCAGGGTTCAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIREVGA*SGFRAS
Trigger: AGATGCTCTGAACCCTGAGCAGGCACCCACTTCCCT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCAAGGAACCTTAAAATaGACCTGGTCCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGQGTLK*TWSPGQ
Trigger: CTGGCCTGGGGACCAGGTGCATTTTAAGGTTCCTTG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGTGATTTCCTTGAAATaGATGAGGCTAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIVISLK*MRLERE
Trigger: TTCCCTTTCTAGCCTCATGCATTTCAAGGAAATCAC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCTCCTGCTATTTCTGTTaGAGTTACAACCGGAAGACC +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTSCYFC*SYNRKT
Trigger: GGTCTTCCGGTTGTAACTGCAACAGAAATAGCAGGA...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR GCA 90 bp TTCTTCCTCTCCTTGATACGACTCGGCTTCCTTGTCTACAGGAGGTGTCACTATTCATTACTACCTGCATaGTTATTTTGCCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: FFLSLIRLGFLVYRRCHYSLLPA*LFCQDS
Trigger: GGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGA...ATAGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGCATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLHLRLS*TSPASC
Trigger: ACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATG...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAAACCCTTTGTCGGGTaGGCAGCAGTCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIKPFVG*AAVAPL
Trigger: AAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GGAACAGAAGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTCATTTCAGTTTTaGGAAGCGAGTCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GTEECHVQKSQLCGCRIARSFQF*EASLSE
Trigger: TTCTGAAAGACTCGCTTCCCAAAACTGAAATGACCT...TGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCTTCTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAAGGGAGGTAAAGCTGTaGTTGTTGACAATGACACAG +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSREVKL*LLTMTQ
Trigger: CTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAGGACTCCTGCGGTAAGGCTTCCAAGAATGTCTTAACATCTGTTTGGGAAACTAGGGAGGTAAAGCTGTaGTTGTTGACAATGACACAG +
Preference number: 4 (lower is better)
Translates to: QDSCGKASKNVLTSVWETREVKL*LLTMTQ
Trigger: CTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT...AGTTTCCCAAACAGATGTTAAGACATTCTTGGAAGCCTTACCGCAGGAGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCTTTTGGGGACAGAGGTaGGAGGATCACTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGFWGQR*EDHLGL
Trigger: TAGGCCCAAGTGATCCTCCCACCTCTGTCCCCAAAA...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCATAATCCCAGTATTTTaGGGACAGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTIIPVF*GQRWED
Trigger: ATCCTCCCACCTCTGTCCCCAAAATACTGGGATTAT...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAACCTTAAAATGCACCTaGTCCCCAGGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPTLKCT*SPGQAQ
Trigger: CTGTGCCTGGCCTGGGGACCAGGTGCATTTTAAGGT...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGCACCCAGTCCAAAATaGAATATGACATCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPAPSPK*NMTSGC
Trigger: ACAACCTGATGTCATATTCCATTTTGGACTGGGTGC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTCAGTCAATTTGAATTaGGTGTTCTGTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWSVNLN*VFCQWQ
Trigger: TTGCCATTGACAGAACACCCAATTCAAATTGACTGA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGGCTCATTGTTTTCCTaGAACCCATTGTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSGSLFS*NPLYEG
Trigger: GCCTTCATACAATGGGTTCCAGGAAAACAATGAGCC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAAAGAAACATGAAAGGTaGCTTGACAGCCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSKKHER*LDSQGQ
Trigger: CTGTCCTTGGCTGTCAAGCCACCTTTCATGTTTCTT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGTATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVYDGLA*AQRPDR
Trigger: CCTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATA...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGCTTCTTCTGCCGTATaGTATAGAGGAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGASSAV*YRGVLP
Trigger: TGGCAGAACTCCTCTATATCATACGGCAGAAGAAGC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGAGCCACTGGAACACATaGCTCAGGATCTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVSHWNT*LRISAS
Trigger: AGATGCTGAGATCCTGAGTCATGTGTTCCAGTGGCT...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTGTGTATATGCACTGTaGACCCAAGCCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGCVYAL*TQATGT
Trigger: TGTTCCAGTGGCTTGGGTTCACAGTGCATATACACA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTTCCTGTTTCTAGAATaGCAGGTGGAGACCACCGAT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSFLFLE*QVETTD
Trigger: ATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGGGTGGGTGGACTGTaGCCTCACTGTCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIRVGGL*PHCPMF
Trigger: AAACATTGGACAGTGAGGTCACAGTCCACCCACCCT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGCAGCTGAGTGTAAATaGGCCATCATCTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGAAECK*AIIFLQ
Trigger: CTGTAGGAAGATGATGGCTCATTTACACTCAGCTGC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATCTGTCAATGGCAACTaGAATGTTCCAACCCCAATA +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISASVNGN*NVPTPI
Trigger: TATTGGGGTTGGAACATTTCAGTTGCCATTGACAGA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGATTCAAGCTTTGCCTaGAGCCAGTGTTATCCACTC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSDSSFA*SQCYPL
Trigger: GAGTGGATAACACTGGCTTCAGGCAAAGCTTGAATC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGATTCAAGCTTTGCCTaGAGCCAGTGTTATCCACTC +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGDSSFA*SQCYPL
Trigger: GAGTGGATAACACTGGCTTCAGGCAAAGCTTGAATC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTAACAGCTTCAGTTTCTaGCACAGCCTCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGNSFSF*HSLSPH
Trigger: ATGAGGAGAGAGGCTGTGTCAGAAACTGAAGCTGTT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAAAATGCAGGCACCACTaGGAGTTGTTGTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSKCRHH*ELLFFI
Trigger: AATGAAGAACAACAACTCTCAGTGGTGCCTGCATTT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAACTGGACAAGGACTGTaGCCACTAGCTTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSITGQGL*PLAFGP
Trigger: AGGGCCAAAAGCTAGTGGTCACAGTCCTTGTCCAGT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGTAGAATCCTCTGTGTaGTCCAAGGTCCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSVESSV*SKVQRS
Trigger: GCTTCTTTGGACCTTGGAGCACACAGAGGATTCTAC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ATGTTTCTCAAAAGTTTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCGTAGAATCCTCTGTGTaGTCCAAGGTCCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: MFLKSLGTTVLQRSSRHVVESSV*SKVQRS
Trigger: GCTTCTTTGGACCTTGGAGCACACAGAGGATTCTAC...GACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAAACTTTTGAGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCCTGCATGCTTATTTTaGCAGGACTCCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGPACLF*QDSCGK
Trigger: CTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGACCTTGAGATTTCATaGCCAGCCTTCAGATCAAGC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSDLEIS*PAFRSS
Trigger: GCTTGATCTGAAGGCTGGCCATGAAATCTCAAGGTC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAAGGTCATTTCAGTTTTaGGAAGCGAGTCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPRSFQF*EASLSE
Trigger: TTCTGAAAGACTCGCTTCCCAAAACTGAAATGACCT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATTGGTGCACCATTTGTaGCTCTGTTACCATTACTAC +
Preference number: 4 (lower is better)
Translates to: CAYLGGRVVCPFPYNISALVHHL*LCYHYY
Trigger: GTAGTAATGGTAACAGAGCCACAAATGGTGCACCAA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCCTGGAGACCAGGCTTaGTGCACCATTTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNPGDQA*CTICGS
Trigger: AGAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGTQRPL*FRFILY
Trigger: GTACAGGATGAATCGGAACCACAGAGGCCTCTGTGT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAAGATCAGAGAGAGGGTaGGTGGACTGTGACCTCACT +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPRSERG*VDCDLT
Trigger: AGTGAGGTCACAGTCCACCCACCCTCTCTCTGATCT...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGATCAGAGAGAGGGTaGGTGGACTGTGACCTCACT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIRSERG*VDCDLT
Trigger: AGTGAGGTCACAGTCCACCCACCCTCTCTCTGATCT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATGGGTGTTCTGTCAATaGCAACTGAAATGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSWVFCQ*QLKCSN
Trigger: GTTGGAACATTTCAGTTGCCATTGACAGAACACCCA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
3UTR CAA 72 bp TACTCAGAGTATGTCAGGGGTAATGCTAGTGCTGAGTaGCCGCTAATAAAGTCAGCTGGAATTACGCACAAA +
Preference number: 4 (lower is better)
Translates to: YSEYVRGNASAE*PLIKSAGITHK
Trigger: TTTGTGCGTAATTCCAGCTGACTTTATTAGCGGCAACTCAGCACTAGCATTACCCCTGACATACTCTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGTTCTTCCTCTCCTTaGTACGACTCGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSISSSSP*YDSASL
Trigger: CAAGGAAGCCGAGTCGTATCAAGGAGAGGAAGAACT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCTTCCTGTTTCTAGAATaGCAGGTGGAGACCACCGAT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGFLFLE*QVETTD
Trigger: ATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAA...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATTGGGCCTAGGAGTTTaGAACCAGCCTGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSILGLGV*NQPVQQ
Trigger: TTGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAGCCCAGGTGACGGAGTaGCTCTGTCTCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIAQVTE*LCLKEK
Trigger: TTTTTCTTTGAGACAGAGTCACTCCGTCACCTGGGC...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCACATTCACATATCAAATaGAACACTCCTAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPHSHIK*NTPNAL
Trigger: AAGGGCATTAGGAGTGTTTCATTTGATATGTGAATG...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGAGCATTTTGTCCAACTaGACTCAGAGTCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLSILSN*TQSQEL
Trigger: CAGCTCTTGACTCTGAGTTCAGTTGGACAAAATGCT...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSDIEEF*QEERVF
Trigger: GAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCATTGGTACAGTTGAGGTaGTGCAGCAGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPLVQLR*CSSFFC
Trigger: GCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAA...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATACATCCTGTACACAGCTaGCCTCTTTGTGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIHPVHS*PLCAGF
Trigger: GAAACCAGCACAAAGAGGGCAGCTGTGTACAGGATG...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR GCA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAACATTATTGTGTATATaGACTGTGAACCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSTLLCI*TVNPSH
Trigger: GTGGCTTGGGTTCACAGTGCATATACACAATAATGT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGACTGAATATACCAGCTaGCTTCCTCCACATGCCGAA +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVTEYTS*LPPHAE
Trigger: TTCGGCATGTGGAGGAAGGCAGCTGGTATATTCAGT...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTTCACATGTCAGTTCTaGCAACTGGACAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGFTCQF*QLDKDC
Trigger: ACAGTCCTTGTCCAGTTGGCAGAACTGACATGTGAA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTCACCATCCTTCACTTaGCTTCACATGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLSPSFT*LHMSVL
Trigger: CAGAACTGACATGTGAAGGCAAGTGAAGGATGGTGA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCACTAAAGGCATTTATATaGACCTCAGCACAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPLKAFI*TSAQLD
Trigger: ATCTAACTGTGCTGAGGTGCATATAAATGCCTTTAG...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTCCTGCTATTTCTGTTaGAGTTACAACCGGAAGACC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSSCYFC*SYNRKT
Trigger: GGTCTTCCGGTTGTAACTGCAACAGAAATAGCAGGA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCAAGAGCTGGCCTTCTaGTGCGGTAGACATCACGAA +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNQELAF*CGRHHE
Trigger: TTCGTGATGTCTACCGCAGCAGAAGGCCAGCTCTTG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCGTGGAAGCCACAAAGTaGTTCAGGCTTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGVEATK*FRLSFG
Trigger: TCCAAAGGAAAGCCTGAAGCACTTTGTGGCTTCCAC...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR GCA 90 bp ATGTTTCTCAAAAGTTTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCGCCCTCATTACTACCTaGATGCTTATTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MFLKSLGTTVLQRSSRHVALITT*MLILPG
Trigger: TCCTGGCAAAATAAGCATGCAGGTAGTAATGAGGGC...GACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAAACTTTTGAGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp TATGTTTCTCAAAAGTTTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTAGGTTCTCCACATCTTaGACCCCCAGGTTTGAATCA +
Preference number: 4 (lower is better)
Translates to: YVSQKFRYNCFAEVLQACRFSTS*TPRFES
Trigger: TGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCT...ACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAAACTTTTGAGAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCACATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPHLRLS*TSPASC
Trigger: ACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATG...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp TTTTGCAGAGGTCCTCCAGGCATGTCAGATTATCTTCATCTATTTTACCTTGTTACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: FCRGPPGMSDYLHLFYLVTQRPL*FRFILY
Trigger: GTACAGGATGAATCGGAACCACAGAGGCCTCTGTGT...AACAAGGTAAAATAGATGAAGATAATCTGACATGCCTGGAGGACCTCTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTAGGGAGGTAAAGCTGTaGTTGTTGACAATGACACAG +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGREVKL*LLTMTQ
Trigger: CTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTCACCTTGGCAGGCCTaGATGAAAAAGAGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSSPWQA*MKKSLG
Trigger: ACCTAAACTCTTTTTCATCCAGGCCTGCCAAGGTGA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTGTATCTCTTCACCTTaGCAGGCCTGGATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGCISSP*QAWMKK
Trigger: CTTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCGAGCATCTGCTTCGATaGATACGGAAGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGEHLLR*IRKAVS
Trigger: AGATACAGCCTTCCGTATCCATCGAAGCAGATGCTC...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAAAGGATACATAGCCTaGGACAGTGGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIKGYIA*DSGQTK
Trigger: CTTGGTCTGGCCACTGTCCCAGGCTATGTATCCTTT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAAAAGGATACATAGCCTaGGACAGTGGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPKGYIA*DSGQTK
Trigger: CTTGGTCTGGCCACTGTCCCAGGCTATGTATCCTTT...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCCACAAAAGCAGGAAATaGGCCTGGCATAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSHKSRK*AWHRPN
Trigger: ATTTGGTCTATGCCAGGCCCATTTCCTGCTTTTGTG...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCCCTGTTGCCCAAGCTaGAGTGCAGTTGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNPCCPS*SAVVSS
Trigger: AGATGACACAACTGCACTCCAGCTTGGGCAACAGGG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATCAGTCAATTTGAATTaGGTGTTCTGTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPSVNLN*VFCQWQ
Trigger: TTGCCATTGACAGAACACCCAATTCAAATTGACTGA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAAGTTTATCAGAGGCTTaGATTGCTTCTATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPSLSEA*IASMSL
Trigger: AAGAGACATAGAAGCAATCCAAGCCTCTGATAAACT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCGCTAATAAAGTCAGCTaGAATTACGCACAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTANKVS*NYAQRN
Trigger: GTTCCTTTGTGCGTAATTCCAGCTGACTTTATTAGC...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR TCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTTGGACCCCCAGGTTTaGATCAATAATCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSLDPQV*INNQKL
Trigger: AAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCACTTTGGATCTCCCTATaGGGGCTCACCTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPLWISL*GLTFKD
Trigger: ATCCTTAAAGGTGAGCCCTCATAGGGAGATCCAAAG...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGAAAGAAGCTCCCATTTaGTTGGGAAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLKEAPI*LGRDFK
Trigger: CTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTT...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAGGGTTCAGAGCATCTaGTTCGATGGATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNRVQSI*FDGYGR
Trigger: CCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAACTGAATATACCAGCTaGCTTCCTCCACATGCCGAA +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPTEYTS*LPPHAE
Trigger: TTCGGCATGTGGAGGAAGGCAGCTGGTATATTCAGT...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTATCAGAGGCTTGGATTaGTTCTATGTCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGIRGLD*FYVSLL
Trigger: CAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGAT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCTTCACATGTCAGTTCTaGCAACTGGACAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGFTCQF*QLDKDC
Trigger: ACAGTCCTTGTCCAGTTGGCAGAACTGACATGTGAA...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTCATTACTACCTGCATaGTTATTTTGCCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSSLLPA*LFCQDS
Trigger: GGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAGACCTTGAGATTTCATaGCCAGCCTTCAGATCAAGC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIDLEIS*PAFRSS
Trigger: GCTTGATCTGAAGGCTGGCCATGAAATCTCAAGGTC...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCTGCCCTCTTTGTGCTaGTTTCAGAGTTTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGLPSLC*FQSLEC
Trigger: ACACTCTAAACTCTGAAACCAGCACAAAGAGGGCAG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCTCACCTTGGCAGGCCTaGATGAAAAAGAGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGSPWQA*MKKSLG
Trigger: ACCTAAACTCTTTTTCATCCAGGCCTGCCAAGGTGA...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGAGCATCTGCTTCGATaGATACGGAAGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPEHLLR*IRKAVS
Trigger: AGATACAGCCTTCCGTATCCATCGAAGCAGATGCTC...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAGCAGGAAATGGGCCTaGCATAGACCAAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGSRKWA*HRPNFH
Trigger: GTGAAAATTTGGTCTATGCCAGGCCCATTTCCTGCT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGCACCCAGTCCAAAATaGAATATGACATCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TKATIQVFNNESFLARCGAPSPK*NMTSGC
Trigger: ACAACCTGATGTCATATTCCATTTTGGACTGGGTGC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGCACCCAGTCCAAAATaGAATATGACATCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSAPSPK*NMTSGC
Trigger: ACAACCTGATGTCATATTCCATTTTGGACTGGGTGC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAACAGCTTCAGTTTCTaGCACAGCCTCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNNSFSF*HSLSPH
Trigger: ATGAGGAGAGAGGCTGTGTCAGAAACTGAAGCTGTT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCTTTGGATCTCCCTATaGGGGCTCACCTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNLWISL*GLTFKD
Trigger: ATCCTTAAAGGTGAGCCCTCATAGGGAGATCCAAAG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAAATGCAGGCACCACTaGGAGTTGTTGTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGKCRHH*ELLFFI
Trigger: AATGAAGAACAACAACTCTCAGTGGTGCCTGCATTT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGACTCAGCAGATCCTCTaGCAAGAGATGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVTQQIL*QEMFKN
Trigger: GTTTTTGAACATCTCTTGGCAGAGGATCTGCTGAGT...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAGTTCTCTGAGTCAATaGCTTCTGACAGTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGSSLSQ*LLTVRR
Trigger: TCTACGAACTGTCAGAAGGCATTGACTCAGAGAACT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGTTACCATTACTACCTaGATGCTTATTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSVTITT*MLILPG
Trigger: TCCTGGCAAAATAAGCATGCAGGTAGTAATGGTAAC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATTTGAAACCAGCCTGTaGAACAAAGTGAGATCCCTC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIFETSL*NKVRSL
Trigger: GAGGGATCTCACTTTGTTGCACAGGCTGGTTTCAAA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGCAATGTTTAAGGGCATaGAGAGGGGACACAGAATTA +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVQCLRA*RGDTEL
Trigger: TAATTCTGTGTCCCCTCTGCATGCCCTTAAACATTG...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCAATGTTTAAGGGCATaGAGAGGGGACACAGAATTA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGQCLRA*RGDTEL
Trigger: TAATTCTGTGTCCCCTCTGCATGCCCTTAAACATTG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGGTGATTTCCTTGAAATaGATGAGGCTAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLVISLK*MRLERE
Trigger: TTCCCTTTCTAGCCTCATGCATTTCAAGGAAATCAC...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATCACCATCCTTCACTTaGCTTCACATGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSISPSFT*LHMSVL
Trigger: CAGAACTGACATGTGAAGGCAAGTGAAGGATGGTGA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAGGTTCTCCACATCTTaGACCCCCAGGTTTGAATCA +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNRFSTS*TPRFES
Trigger: TGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGGGAGGTAAAGCTGTaGTTGTTGACAATGACACAG +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIREVKL*LLTMTQ
Trigger: CTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATGCTCCAAATCTCCCATaGGTCAGAATACAGAACACG +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNAPNLP*VRIQNT
Trigger: CGTGTTCTGTATTCTGACCCATGGGAGATTTGGAGC...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCATCACCTTGGCAGGCCTaGATGAAAAAGAGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPSPWQA*MKKSLG
Trigger: ACCTAAACTCTTTTTCATCCAGGCCTGCCAAGGTGA...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATGAGCATCTGCTTCGATaGATACGGAAGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNEHLLR*IRKAVS
Trigger: AGATACAGCCTTCCGTATCCATCGAAGCAGATGCTC...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGGATGTCTTCATGTCTTaGGACCAATTTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLDVFMS*DQFLQM
Trigger: CATCTGAAGAAATTGGTCCCAAGACATGAAGACATC...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATAATCCCAGTATTTTaGGGACAGAGGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIIIPVF*GQRWED
Trigger: ATCCTCCCACCTCTGTCCCCAAAATACTGGGATTAT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTCTAGGCTAAGAACGTaGTTTTTGAACACCAAGGAA +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSSRLRT*FLNTKE
Trigger: TTCCTTGGTGTTCAAAAACCACGTTCTTAGCCTAGA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGCAGGAAATGGGCCTaGCATAGACCAAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSISRKWA*HRPNFH
Trigger: GTGAAAATTTGGTCTATGCCAGGCCCATTTCCTGCT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCTGGGTGTTCTGTCAATaGCAACTGAAATGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGWVFCQ*QLKCSN
Trigger: GTTGGAACATTTCAGTTGCCATTGACAGAACACCCA...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAGCATTCCAGTTCACCTaGCTGAAGTCAAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIAFQFT*LKSNPV
Trigger: TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGC...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCACTCTCTTCTCTTTCTaGCTGCTCGCTGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGTLFSF*LLAVRK
Trigger: TTTTCTAACAGCGAGCAGCCAGAAAGAGAAGAGAGT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCATTGGACCCCCAGGTTTaGATCAATAATCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPLDPQV*INNQKL
Trigger: AAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAA...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAACTCAGCAGATCCTCTaGCAAGAGATGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSITQQIL*QEMFKN
Trigger: GTTTTTGAACATCTCTTGGCAGAGGATCTGCTGAGT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCCTAAAGGCATTTATATaGACCTCAGCACAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: NAQNLNEESIKASLQSHSLKAFI*TSAQLD
Trigger: ATCTAACTGTGCTGAGGTGCATATAAATGCCTTTAG...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAAGCTCCCATTTGCTTaGGAAGAGACTTCAAGACTT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIKLPFA*EETSRL
Trigger: AAGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CAGTGTGAAATTCACTTTTCCCCATGGACCATTTGTTTAAATTGTTTAACCATCAGGTTCTCCACATCTTaGACCCCCAGGTTTGAATCA +
Preference number: 4 (lower is better)
Translates to: QCEIHFSPWTICLNCLTIRFSTS*TPRFES
Trigger: TGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCT...GATGGTTAAACAATTTAAACAAATGGTCCATGGGGAAAAGTGAATTTCACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCAGGTCATTTCAGTTTTaGGAAGCGAGTCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGRSFQF*EASLSE
Trigger: TTCTGAAAGACTCGCTTCCCAAAACTGAAATGACCT...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAATCTCAGCATCTTTATaGGTTCCTTGTCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPISASL*VPCLSF
Trigger: GAAGGACAGACAAGGAACCCATAAAGATGCTGAGAT...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATCTCAGCATCTTTATaGGTTCCTTGTCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIISASL*VPCLSF
Trigger: GAAGGACAGACAAGGAACCCATAAAGATGCTGAGAT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CAGTGTGAAATTCACTTTTCCCCATGGACCATTTGTTTAAATTGTTTAACCATCGAGCATCTGCTTCGATaGATACGGAAGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: QCEIHFSPWTICLNCLTIEHLLR*IRKAVS
Trigger: AGATACAGCCTTCCGTATCCATCGAAGCAGATGCTC...GATGGTTAAACAATTTAAACAAATGGTCCATGGGGAAAAGTGAATTTCACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CCA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCTCTAGGCTAAGAACGTaGTTTTTGAACACCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGSRLRT*FLNTKE
Trigger: TTCCTTGGTGTTCAAAAACCACGTTCTTAGCCTAGA...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGAGTTTATCAGAGGCTTaGATTGCTTCTATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLSLSEA*IASMSL
Trigger: AAGAGACATAGAAGCAATCCAAGCCTCTGATAAACT...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CCA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGCTAATAAAGTCAGCTaGAATTACGCACAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVANKVS*NYAQRN
Trigger: GTTCCTTTGTGCGTAATTCCAGCTGACTTTATTAGC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAGTTCTCTGAGTCAATaGCTTCTGACAGTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNSSLSQ*LLTVRR
Trigger: TCTACGAACTGTCAGAAGGCATTGACTCAGAGAACT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR GCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAACATTATTGTGTATATaGACTGTGAACCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSITLLCI*TVNPSH
Trigger: GTGGCTTGGGTTCACAGTGCATATACACAATAATGT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR GCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCATGTAAAGTTTCTGCTTaGAGAGCAGCTGAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPCKVSA*RAAECK
Trigger: TTTACACTCAGCTGCTCTGCAAGCAGAAACTTTACA...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGATGTCTTCATGTCTTaGGACCAATTTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPDVFMS*DQFLQM
Trigger: CATCTGAAGAAATTGGTCCCAAGACATGAAGACATC...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CCA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATATGAAGGCAAAGTTTaGCAGTTACCCAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIYEGKV*QLPKRL
Trigger: AAGTCTCTTGGGTAACTGCCAAACTTTGCCTTCATA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR TCA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCACATTCACATATCAAATaGAACACTCCTAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPHSHIK*NTPNAL
Trigger: AAGGGCATTAGGAGTGTTTCATTTGATATGTGAATG...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR TCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATATACTAGTTTCCTGCTaGTGTCATCACTGCTTATCT +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNILVSC*CHHCLS
Trigger: AGATAAGCAGTGATGACATCAGCAGGAAACTAGTAT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR CCA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATTCAGTCAATTTGAATTaGGTGTTCTGTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNSVNLN*VFCQWQ
Trigger: TTGCCATTGACAGAACACCCAATTCAAATTGACTGA...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGGTTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTTCTTCAGGTGGGCGTTaGCCCAGCCTTTGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: EVQGRAEEQASPGSVSCPSSGGR*PSLCQA
Trigger: AGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGA...AGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS TCA 90 bp GGGTCGAGGTGTCTGCGCAGAGATGGCCGTGGGCAGGGAGGTTGCTaGGATCTGTTTAGCACCCCACACTGTTCTCTTCCTGCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: GSRCLRRDGRGQGGC*DLFSTPHCSLPAPD
Trigger: ATCAGGGGCAGGAAGAGAACAGTGTGGGGTGCTAAACAGATCTCAGCAACCTCCCTGCCCACGGCCATCTCTGCGCAGACACCTCGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272879.9
ENST00000448480.1
CDS-3UTR CAA 90 bp GGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTGCGCTCCACTTCCTCTTaGGTACAGTTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GRAEEQASPGSVSCPDCLRSTSS*VQLRCC
Trigger: GCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCG...CAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp TTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCGTTTGCCCAGCCTTaGCCAAGCTCCAGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: FRAEPKSRPLPALCHVLIAFAQP*PSSRSY
Trigger: GTAGCTCCTGGAGCTTGGCAAAGGCTGGGCAAACGC...AATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTGTCCTCTTTGGTACAGTaGAGGTGCTGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GRAEEQASPGSVSCPDCLSSLVQ*RCCSSF
Trigger: GAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGA...CAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTGCCTGTACGACTCGGCTTCCTaGTCTACAGGAGGTGTCACT +
Preference number: 5 (lower is better)
Translates to: GRAEEQASPGSVSCPDCLYDSAS*STGGVT
Trigger: AGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTA...CAGGCAATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GAGGTTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATG +
Preference number: 5 (lower is better)
Translates to: EVQGRAEEQASPGSVSCPDFSSF*LGTNPM
Trigger: CATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTC...AGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GAGGTTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTCCTATGCAGAGAAACTaGAGGTTCTCCACATCTTGG +
Preference number: 5 (lower is better)
Translates to: EVQGRAEEQASPGSVSCPPMQRN*RFSTSW
Trigger: CCAAGATGTGGAGAACCTCAAGTTTCTCTGCATAGG...AGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCCTCTTCCTCTTTGGTACAGTaGAGGTGCTGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GRCQSQAMWLEGRQKEASSSLVQ*RCCSSF
Trigger: GAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGA...AGAGGCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAACGCTCCACTTCCTCTTaGGTACAGTTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: AVGRCQSQAMWLEGRQKERSTSS*VQLRCC
Trigger: GCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCG...TTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS GCA 90 bp TCTGTGTCATGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTaGCCAGCCTTTGCCAAGCTCCAGGAGCTACAGGTCATCTGGCGA +
Preference number: 5 (lower is better)
Translates to: SVSCPDCLHSLQVGV*PAFAKLQELQVIWR
Trigger: TCGCCAGATGACCTGTAGCTCCTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTACGCTCCACTTCCTCTTaGGTACAGTTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVRSTSS*VQLRCC
Trigger: GCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCG...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp GGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGCCTCTGGCTTGGTGCACCATTaGTGGCTCTGTTACCATTAC +
Preference number: 5 (lower is better)
Translates to: GRCQSQAMWLEGRQKEASGLVHH*WLCYHY
Trigger: GTAATGGTAACAGAGCCACAAATGGTGCACCAAGCC...AGAGGCTTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCGTTAGCAGATGCTCCTaGCATCCCCCTGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: ARWCCKGRFPSCCRALSIVSRCS*HPPGDQ
Trigger: CTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAAC...GATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAATCTTGCTGTAGGGCGTaGTCAATCTCAGGCGATGTG +
Preference number: 5 (lower is better)
Translates to: AVGRCQSQAMWLEGRQKESCCRA*SISGDV
Trigger: CACATCGCCTGAGATTGACAACGCCCTACAGCAAGA...TTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGCCAAGCTCCAGTTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: DCLHSLQVGVCPAFAKLQFSSFL*GTNPMQ
Trigger: CTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAA...CTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp TGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTTCGGCATGGGCTGGATaGCACTTCTGCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: CHVQKSQLCGCRIARWCCSAWAG*HFCFCR
Trigger: CCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGA...ACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTCGGCATGGGCTGGATaGCACTTCTGCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWSAWAG*HFCFCR
Trigger: CCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS CCA 90 bp AGGGAGGTAAAGCTGTGGTTGTTGACAATGACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTACACAGCTGCCCTCGGTAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: REVKLWLLTMTQRPL*FRFILYTAALGKAS
Trigger: GGAAGCCTTACCGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346817.9
ENST00000448480.1
CDS-3UTR CAA 90 bp CCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAATACCAATGTTGACCTaGAGATTTCATGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PSCCRALSISGDVAGRQAIPMLT*RFHGQP
Trigger: AGGCTGGCCATGAAATCTCAAGGTCAACATTGGTAT...TGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp TTCAGGGCAGAGCCGAAGAGCAGGCCTCTCCCGGCTCTGTGTCATGTCCTGATTATACCAATGTTGACCTaGAGATTTCATGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: FRAEPKSRPLPALCHVLIIPMLT*RFHGQP
Trigger: AGGCTGGCCATGAAATCTCAAGGTCAACATTGGTAT...AATCAGGACATGACACAGAGCCGGGAGAGGCCTGCTCTTCGGCTCTGCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVFSSFL*GTNPMQ
Trigger: CTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATG +
Preference number: 5 (lower is better)
Translates to: KGGFRLAVGRCQSQAMWLDFSSF*LGTNPM
Trigger: CATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTC...CAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp TTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGACCCTGGAGACCAGGCTaGGTGCACCATTTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: FRSLNFVAAESQGGAVKGPWRPG*VHHLWL
Trigger: GAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGGG...TCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAATCTTTATGGGTTCCTaGTCTGTCCTTCAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: AVGRCQSQAMWLEGRQKEIFMGS*SVLQGG
Trigger: ACCTCCCTGAAGGACAGACAAGGAACCCATAAAGAT...TTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTACGACTCACATCATCGTaGACAGCAGTGAGGATGGAT +
Preference number: 5 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVRLTSS*TAVRMD
Trigger: ATCCATCCTCACTGCTGTCAACGATGATGTGAGTCG...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCAGGACTGTGAGCAGGTaGTTCACATCCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIRTVSR*FTSPGL
Trigger: GAGGCCTGGGGATGTGAACAACCTGCTCACAGTCCT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTACAGTCAAAGGGGGTaGTTCTCTGGCTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWYSQRG*FSGWQG
Trigger: TCCCTGCCAGCCAGAGAACAACCCCCTTTGACTGTA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS GCA 90 bp GAGGTGCTGCAGCAGCTTCTTCTGCCGTATGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTCCTCACTCAGCAGATCCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: EVLQQLLLPYDIEEF*QEERVFLTQQILCQ
Trigger: TTGGCAGAGGATCTGCTGAGTGAGGAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATCATACGGCAGAAGAAGCTGCTGCAGCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS GCA 90 bp CTCTTTGTGCTGGTTTCAGAGTTTAGAGTGTTAGCAGATGCTCCTTaGATCCCCCTGGAGACCAGGCTTGGTGCACCATTTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LFVLVSEFRVLADAP*IPLETRLGAPFVAL
Trigger: CAGAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAACACTCTAAACTCTGAAACCAGCACAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272879.9
ENST00000286186.11
CDS GCA 90 bp ACCTTTGTGCTGGTTTCAGAGTTTAGAGTGTTAGCAGATGCTCCTTaGATCCCCCTGGAGACCAGGCTTGGTGCACCATTTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TFVLVSEFRVLADAP*IPLETRLGAPFVAL
Trigger: CAGAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAACACTCTAAACTCTGAAACCAGCACAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460140.5
CDS CCA 90 bp ACTGCAGCTTCCTTTCAAAGCCCAATGGCCAGAATGAACACTAGATaGGAGATCCTCCCATCTCCACCACAGACCCGTCCTCACCTAAAC +
Preference number: 5 (lower is better)
Translates to: TAASFQSPMARMNTR*EILPSPPQTRPHLN
Trigger: GTTTAGGTGAGGACGGGTCTGTGGTGGAGATGGGAGGATCTCCCATCTAGTGTTCATTCTGGCCATTGGGCTTTGAAAGGAAGCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484926.1
CDS-3UTR CAA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGGAAGCTCCCATTTGCTaGGGAAGAGACTTCAAGACT +
Preference number: 5 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDREAPIC*GRDFKT
Trigger: AGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTC...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp AGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: RIARWCCKGRFPSCCRALFSSFL*GTNPMQ
Trigger: CTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAA...CAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp CTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTTACGACTCGGCTTCCTaGTCTACAGGAGGTGTCACT +
Preference number: 5 (lower is better)
Translates to: LNFVAAESQGGAVKGGFRYDSAS*STGGVT
Trigger: AGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTA...ACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGTTAGCAGATGCTCCTaGCATCCCCCTGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPVSRCS*HPPGDQ
Trigger: CTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAAC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CAA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTAGAGGTAAAGCTGTGGTaGTTGACAATGACACAGAGG +
Preference number: 5 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVEVKLW*LTMTQR
Trigger: CCTCTGTGTCATTGTCAACAACCACAGCTTTACCTC...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS CCA 90 bp AGGGAGGTAAAGCTGTGGTTGTTGACAATGACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTACACAGCTGCCCTCTTTGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: REVKLWLLTMTQRPL*FRFILYTAALFVLV
Trigger: AACCAGCACAAAGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGTCAACAACCACAGCTTTACCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272879.9
ENST00000286186.11
CDS-3UTR CAA 90 bp CAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGAAGAGGAAGCTCCCATTTGCTaGGGAAGAGACTTCAAGACT +
Preference number: 5 (lower is better)
Translates to: QMPKYLHLPNEVQGRAEEEAPIC*GRDFKT
Trigger: AGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTC...CTCTTCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp ACAATGACACAGAGGCCTCTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCGAAGCTCCCATTTGCTaGGGAAGAGACTTCAAGACT +
Preference number: 5 (lower is better)
Translates to: TMTQRPLWFRFILYTAALEAPIC*GRDFKT
Trigger: AGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTC...GAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCTCCTCTTTGGTACAGTaGAGGTGCTGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCISSLVQ*RCCSSF
Trigger: GAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGA...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CTGTGTCATGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTGAGGTCATTTCAGTTTaGGGAAGCGAGTCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: LCHVLIACIVFRWAFAQPEVISV*GSESFR
Trigger: TCTGAAAGACTCGCTTCCCAAAACTGAAATGACCTC...AGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp GTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAACACAGCTGCCCTCTTaGTGCTGGTTTCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: VAAESQGGAVKGGFRLAVTQLPS*CWFQSL
Trigger: TAAACTCTGAAACCAGCACAAAGAGGGCAGCTGTGT...TACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTCAGAAGTCTCAACTTaGTGGCTGCAGAATCGCAAG +
Preference number: 5 (lower is better)
Translates to: VPRSEVSTLWLQNRKVVLSEVST*WLQNRK
Trigger: CTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGA...CAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAAGTGATCTGCCTGCCTaGGCTTCCCAGAGTACTGGG +
Preference number: 5 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSSDLPA*ASQSTG
Trigger: CCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCACT...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGGAAGCTCCCATTTGCTaGGGAAGAGACTTCAAGACT +
Preference number: 5 (lower is better)
Translates to: RVPRSEVSTLWLQNRKVVEAPIC*GRDFKT
Trigger: AGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTC...CACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp CAAATGCCTAAATACCTCCACCTGCCGAATGAGGTTCAGGGCAGAGCCGAAGAGCAAAGAAGCTCCCATTaGCTTGGGAAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: QMPKYLHLPNEVQGRAEEQRSSH*LGKRLQ
Trigger: TTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTTG...CTCTTCGGCTCTGCCCTGAACCTCATTCGGCAGGTGGAGGTATTTAGGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp AAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGACTGGAATACCAATGTaGACCTTGAGATTTCATGGC +
Preference number: 5 (lower is better)
Translates to: KGGFRLAVGRCQSQAMWLTGIPM*TLRFHG
Trigger: GCCATGAAATCTCAAGGTCAACATTGGTATTCCAGT...CAGCCACATCGCCTGAGATTGACAACGCCCTACAGCAAGACGGAAACCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCACGCTCCACTTCCTCTTaGGTACAGTTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSRSTSS*VQLRCC
Trigger: GCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCG...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTTGCTGTAGGGCGTTGGAGGTCATTTCAGTTTaGGGAAGCGAGTCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: RIARWCCKGRFPSCCRALEVISV*GSESFR
Trigger: TCTGAAAGACTCGCTTCCCAAAACTGAAATGACCTC...CAACGCCCTACAGCAAGACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATACGACTCGGCTTCCTaGTCTACAGGAGGTGTCACT +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPYDSAS*STGGVT
Trigger: AGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp AGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGGTAAAGCTGTGGTTGTaGACAATGACACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RVPRSEVSTLWLQNRKVVVKLWL*TMTQRP
Trigger: AGGCCTCTGTGTCATTGTCAACAACCACAGCTTTAC...CACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp CTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGAGGTTTCCGTCTGTATCTCTTCACCTaGGCAGGCCTGGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: LNFVAAESQGGAVKGGFRLYLFT*AGLDEK
Trigger: TTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACAG...ACGGAAACCTCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp GCTGTAGGGCGTTGTCAATCTCAGGCGATGTGGCTGGAAGGCAGGCAGAAGGAAGAAATTTCAGCATCCTaGGGACCAATTTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: AVGRCQSQAMWLEGRQKEEISAS*GPISSD
Trigger: ATCTGAAGAAATTGGTCCCAAGGATGCTGAAATTTC...TTCCTTCTGCCTGCCTTCCAGCCACATCGCCTGAGATTGACAACGCCCTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTGCTTCTATGTCTCTTaGCTGTGCTTATCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWCFYVS*LCLSGR
Trigger: CCTCCCAGATAAGCACAGCAAAGAGACATAGAAGCA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp GCCCTTCCACGCCCCAAGGCATTCCAGTTCACCTGGCTGAAGTCAAATCCAGTATTAGAGAAAACAAATTaGAAAGGGGCTTCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: ALPRPKAFQFTWLKSNPVLEKTN*KGASGR
Trigger: TCGGCCAGAAGCCCCTTTCAAATTTGTTTTCTCTAA...TACTGGATTTGACTTCAGCCAGGTGAACTGGAATGCCTTGGGGCGTGGAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGGTCCTGCTATTTCTGTaGCAGTTACAACCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWVLLFL*QLQPED
Trigger: GTCTTCCGGTTGTAACTGCAACAGAAATAGCAGGAC...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCATACAGTCAAAGGGGGTaGTTCTCTGGCTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAYSQRG*FSGWQG
Trigger: TCCCTGCCAGCCAGAGAACAACCCCCTTTGACTGTA...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS CCA 90 bp GCAGATCCTCTGCCAAGAGATGTTCAAAAACATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGTTGGGGACCAATCCTATGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: ADPLPRDVQKHLRLS*TSPASCWGPILCRE
Trigger: TTCTCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATGTTTTTGAACATCTCTTGGCAGAGGATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS-3UTR CAA 90 bp AGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCAAAGAAGCTCCCATTaGCTTGGGAAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: RVPRSEVSTLWLQNRKVVQRSSH*LGKRLQ
Trigger: TTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTTG...CACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp TGTCATGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTTGACTGGAATACCAATGTaGACCTTGAGATTTCATGGC +
Preference number: 5 (lower is better)
Translates to: CHVLIACIVFRWAFAQPLTGIPM*TLRFHG
Trigger: GCCATGAAATCTCAAGGTCAACATTGGTATTCCAGT...CAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS-3UTR CAA 90 bp TCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTTATTTTGCCAGGACTCCCCTATGCAGAGAAACTaGAGGTTCTCCACATCTTGG +
Preference number: 5 (lower is better)
Translates to: SCTQLPSLLPACLFCQDSPMQRN*RFSTSW
Trigger: CCAAGATGTGGAGAACCTCAAGTTTCTCTGCATAGG...GGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp TCATTACTACCTGCATGCTTATTTTGCCAGGACTCCTGCGGTAAGGCTTCCAAGGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATG +
Preference number: 5 (lower is better)
Translates to: SLLPACLFCQDSCGKASKDFSSF*LGTNPM
Trigger: CATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTC...CTTGGAAGCCTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCACACAGCTGCCCTCTTaGTGCTGGTTTCAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCITQLPS*CWFQSL
Trigger: TAAACTCTGAAACCAGCACAAAGAGGGCAGCTGTGT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGTAAAGCTGTGGTTGTaGACAATGACACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIVKLWL*TMTQRP
Trigger: AGGCCTCTGTGTCATTGTCAACAACCACAGCTTTAC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp GGAACAGAAGAGTGCCACGTTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAGAGGTAAAGCTGTGGTaGTTGACAATGACACAGAGG +
Preference number: 5 (lower is better)
Translates to: GTEECHVQKSQLCGCRIAEVKLW*LTMTQR
Trigger: CCTCTGTGTCATTGTCAACAACCACAGCTTTACCTC...TGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAACGTGGCACTCTTCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGAGGTAAAGCTGTGGTaGTTGACAATGACACAGAGG +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIEVKLW*LTMTQR
Trigger: CCTCTGTGTCATTGTCAACAACCACAGCTTTACCTC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCATCTTTATGGGTTCCTaGTCTGTCCTTCAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIIFMGS*SVLQGG
Trigger: ACCTCCCTGAAGGACAGACAAGGAACCCATAAAGAT...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTCGGCATGGGCTGGATaGCACTTCTGCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSSAWAG*HFCFCR
Trigger: CCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTCTCTCTCCTCATGCCTaGGGCCAGAGGAGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: TKATIQVFNNESFLARCGLSPHA*GQRSKV
Trigger: CACTTTGCTCCTCTGGCCCAAGGCATGAGGAGAGAG...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAGTTAACCACAGGACTTaGGATCTCCCTATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPVNHRT*DLPMRA
Trigger: AGCCCTCATAGGGAGATCCAAAGTCCTGTGGTTAAC...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCCAAAGAAGCTCCCATTaGCTTGGGAAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIQRSSH*LGKRLQ
Trigger: TTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTTG...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGACTGGAATACCAATGTaGACCTTGAGATTTCATGGC +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWTGIPM*TLRFHG
Trigger: GCCATGAAATCTCAAGGTCAACATTGGTATTCCAGT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp TTCAGAAGTCTCAACTTTGTGGCTGCAGAATCGCAAGGTGGTGCTGTAAAGGGACCTATGCAGAGAAACTaGAGGTTCTCCACATCTTGG +
Preference number: 5 (lower is better)
Translates to: FRSLNFVAAESQGGAVKGPMQRN*RFSTSW
Trigger: CCAAGATGTGGAGAACCTCAAGTTTCTCTGCATAGG...TCCCTTTACAGCACCACCTTGCGATTCTGCAGCCACAAAGTTGAGACTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272879.9
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCCGCTCCACTTCCTCTTaGGTACAGTTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSRSTSS*VQLRCC
Trigger: GCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCG...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAAGTGTAGTAGCAGTAACAAGGTGGGGACTGTCCACTGCAGTCTACTGCATCGAGGTCATTTCAGTTTaGGGAAGCGAGTCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: QSVVAVTRWGLSTAVYCIEVISV*GSESFR
Trigger: TCTGAAAGACTCGCTTCCCAAAACTGAAATGACCTC...GATGCAGTAGACTGCAGTGGACAGTCCCCACCTTGTTACTGCTACTACACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCACCCTGGAGACCAGGCTaGGTGCACCATTTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPPWRPG*VHHLWL
Trigger: GAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGGG...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCAATCTTTATGGGTTCCTaGTCTGTCCTTCAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPIFMGS*SVLQGG
Trigger: ACCTCCCTGAAGGACAGACAAGGAACCCATAAAGAT...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGTCGGCATGGGCTGGATaGCACTTCTGCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVSAWAG*HFCFCR
Trigger: CCTGCAGAAGCAGAAGTGCAATCCAGCCCATGCCGA...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGTTTGCTTCAGTCAATTaGAATTGGGTGTTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRFASVN*NWVFCQ
Trigger: TTGACAGAACACCCAATTCAAATTGACTGAAGCAAA...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCTCTCTCCTCATGCCTaGGGCCAGAGGAGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGLSPHA*GQRSKV
Trigger: CACTTTGCTCCTCTGGCCCAAGGCATGAGGAGAGAG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGAGGACTGTGAGCAGGTaGTTCACATCCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVRTVSR*FTSPGL
Trigger: GAGGCCTGGGGATGTGAACAACCTGCTCACAGTCCT...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAAAGTCAGTGAAGGGAGATAGGAAAGAAGTGATTTCCTaGAAATGCATGAGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: HLGAGGLSPKRKSVKGDRKEVIS*KCMRLE
Trigger: TTCTAGCCTCATGCATTTCAAGGAAATCACTTCTTT...CCTATCTCCCTTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCACTCACCATCCTTCACTaGCCTTCACATGTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPLTILH*PSHVSS
Trigger: AGAACTGACATGTGAAGGCAAGTGAAGGATGGTGAG...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATGGAAATGCAGGGCTTaGATCTCCAGATCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPWKCRA*ISRSFA
Trigger: AGCAAAGGATCTGGAGATCAAAGCCCTGCATTTCCA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGTCACTGGGGGAGCTTTaGAGCCAGGATGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVSLGEL*SQDEPG
Trigger: TCCTGGCTCATCCTGGCTCAAAAGCTCCCCCAGTGA...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCACAAAGAAGCTCCCATTaGCTTGGGAAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPQRSSH*LGKRLQ
Trigger: TTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTTG...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CATTACTACCTGCATGCTTATTTTGCCAGGACTCCTGCGGTAAGGCTTCCAAGAATACCAATGTTGACCTaGAGATTTCATGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: HYYLHAYFARTPAVRLPRIPMLT*RFHGQP
Trigger: AGGCTGGCCATGAAATCTCAAGGTCAACATTGGTAT...TCTTGGAAGCCTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp CTGTGGTTCCGATTCATCCTGTACACAGCTGCCCTCATTACTACCTGCATGCTTACTGGAATACCAATGTaGACCTTGAGATTTCATGGC +
Preference number: 5 (lower is better)
Translates to: LWFRFILYTAALITTCMLTGIPM*TLRFHG
Trigger: GCCATGAAATCTCAAGGTCAACATTGGTATTCCAGT...AAGCATGCAGGTAGTAATGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTTCCTCTTTGGTACAGTaGAGGTGCTGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TKATIQVFNNESFLARCGSSLVQ*RCCSSF
Trigger: GAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGA...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ATGTTTCTCAAAAGTTTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCTCCTCTTTGGTACAGTaGAGGTGCTGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: MFLKSLGTTVLQRSSRHVSSLVQ*RCCSSF
Trigger: GAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGA...GACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAAACTTTTGAGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp AAAAGTTTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCAGATTATCTCGCTCCACTTCCTCTTaGGTACAGTTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: KSLGTTVLQRSSRHVRLSRSTSS*VQLRCC
Trigger: GCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCG...AGATAATCTGACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTACGACTCGGCTTCCTaGTCTACAGGAGGTGTCACT +
Preference number: 5 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLYDSAS*STGGVT
Trigger: AGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTACGACTCGGCTTCCTaGTCTACAGGAGGTGTCACT +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSYDSAS*STGGVT
Trigger: AGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCAAAAGTTTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCAGATTATACGACTCGGCTTCCTaGTCTACAGGAGGTGTCACT +
Preference number: 5 (lower is better)
Translates to: LKSLGTTVLQRSSRHVRLYDSAS*STGGVT
Trigger: AGTGACACCTCCTGTAGACAAGGAAGCCGAGTCGTA...TAATCTGACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAAACTTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCACTGTATCTCTTCACCTaGGCAGGCCTGGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: CAYLGGRVVCPFPYNISALYLFT*AGLDEK
Trigger: TTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACAG...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGAGATGTCTTCATGTCTaGGGACCAATTTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWRCLHV*GPISSD
Trigger: ATCTGAAGAAATTGGTCCCAAGACATGAAGACATCT...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATTCTTTGTTCCCTGTTaGTCCACTCTTCGACTCACA +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPFFVPC*STLRLT
Trigger: TGTGAGTCGAAGAGTGGACAAACAGGGAACAAAGAA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATATAATCCCAGTATTTaGGGGACAGAGGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSYNPSI*GTEVGG
Trigger: TCCTCCCACCTCTGTCCCCAAAATACTGGGATTATA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGTGATCTGCCTGCCTaGGCTTCCCAGAGTACTGGG +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSISDLPA*ASQSTG
Trigger: CCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCACT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTTCAGTCAATTTGAATaGGGTGTTCTGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWFSQFE*GVLSMA
Trigger: TGCCATTGACAGAACACCCAATTCAAATTGACTGAA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGTCCTGATTCAAGCTTaGCCTGAAGCCAGTGTTATC +
Preference number: 5 (lower is better)
Translates to: CAYLGGRVVCPFPYNISAVLIQA*PEASVI
Trigger: GATAACACTGGCTTCAGGCAAAGCTTGAATCAGGAC...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGGACTGTGAGCAGGTaGTTCACATCCCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIRTVSR*FTSPGL
Trigger: GAGGCCTGGGGATGTGAACAACCTGCTCACAGTCCT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp TGTGCTTATCTGGGAGGGAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAAACATGAAAGGTGGCTaGACAGCCAAGGACAGGTTT +
Preference number: 5 (lower is better)
Translates to: CAYLGGRVVCPFPYNISANMKGG*TAKDRF
Trigger: AAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT...TGCAGAAATATTGTATGGGAACGGACACACAACTCTCCCTCCCAGATAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATCACTGGGGGAGCTTTaGAGCCAGGATGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSISLGEL*SQDEPG
Trigger: TCCTGGCTCATCCTGGCTCAAAAGCTCCCCCAGTGA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCATACCAATGTTGACCTaGAGATTTCATGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTIPMLT*RFHGQP
Trigger: AGGCTGGCCATGAAATCTCAAGGTCAACATTGGTAT...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCTTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSFSSFL*GTNPMQ
Trigger: CTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAA...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ATGTTTCTCAAAAGTTTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCTTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: MFLKSLGTTVLQRSSRHVFSSFL*GTNPMQ
Trigger: CTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAA...GACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAAACTTTTGAGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp ACATCATCGTTGACAGCAGTGAGGATGGATAAGATGTCTTCATGTCTTGGGACCGAGGTCATTTCAGTTTaGGGAAGCGAGTCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: TSSLTAVRMDKMSSCLGTEVISV*GSESFR
Trigger: TCTGAAAGACTCGCTTCCCAAAACTGAAATGACCTC...GGTCCCAAGACATGAAGACATCTTATCCATCCTCACTGCTGTCAACGATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGGCTTGGTGCACCATTaGTGGCTCTGTTACCATTAC +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSGLVHH*WLCYHY
Trigger: GTAATGGTAACAGAGCCACAAATGGTGCACCAAGCC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286186.11
CDS-3UTR CAA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTCGACTCACATCATCGTaGACAGCAGTGAGGATGGAT +
Preference number: 5 (lower is better)
Translates to: TKATIQVFNNESFLARCGRLTSS*TAVRMD
Trigger: ATCCATCCTCACTGCTGTCAACGATGATGTGAGTCG...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCATTCTTTGTTCCCTGTTaGTCCACTCTTCGACTCACA +
Preference number: 5 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSFFVPC*STLRLT
Trigger: TGTGAGTCGAAGAGTGGACAAACAGGGAACAAAGAA...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCTTGGGCCTAGGAGTTaGAAACCAGCCTGTGCAACA +
Preference number: 5 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGLGPRS*KPACAT
Trigger: TGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAAG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAGTGATCTGCCTGCCTaGGCTTCCCAGAGTACTGGG +
Preference number: 5 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNSDLPA*ASQSTG
Trigger: CCCAGTACTCTGGGAAGCCAAGGCAGGCAGATCACT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp ACGGTGTTTCCTGTTTCTAGAATGACAGGTGGAGACCACCGATTCCTGTGCTGGTTTGCTTCAGTCAATTaGAATTGGGTGTTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: TVFPVSRMTGGDHRFLCWFASVN*NWVFCQ
Trigger: TTGACAGAACACCCAATTCAAATTGACTGAAGCAAA...CCAGCACAGGAATCGGTGGTCTCCACCTGTCATTCTAGAAACAGGAAACACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGTTAACCACAGGACTTaGGATCTCCCTATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSVNHRT*DLPMRA
Trigger: AGCCCTCATAGGGAGATCCAAAGTCCTGTGGTTAAC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTGTTAACCACAGGACTTaGGATCTCCCTATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: TKATIQVFNNESFLARCGVNHRT*DLPMRA
Trigger: AGCCCTCATAGGGAGATCCAAAGTCCTGTGGTTAAC...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTGTGTGTCCGTTCCCATACAATATTTCTGCAGCTGTAGGTACACCCCATTAGAGAAAACAAATTaGAAAGGGGCTTCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: ESCVSVPIQYFCSCRYTPLEKTN*KGASGR
Trigger: TCGGCCAGAAGCCCCTTTCAAATTTGTTTTCTCTAA...TGGGGTGTACCTACAGCTGCAGAAATATTGTATGGGAACGGACACACAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS TCA 90 bp CCATCTCCATTTCCACTTTCGTCACATTATTGTGTATATGCACTGTaGACCCAAGCCACTGGAACACATGACTCAGGATCTCAGCATCTT +
Preference number: 5 (lower is better)
Translates to: PSPFPLSSHYCVYAL*TQATGTHDSGSQHL
Trigger: AAGATGCTGAGATCCTGAGTCATGTGTTCCAGTGGCTTGGGTTCACAGTGCATATACACAATAATGTGACGAAAGTGGAAATGGAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
ENST00000448480.1
ENST00000492363.5
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATG +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVDFSSF*LGTNPM
Trigger: CATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp TTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCAGATTATCTTCATCTGAGGTAAAGCTGTGGTaGTTGACAATGACACAGAGG +
Preference number: 5 (lower is better)
Translates to: LGTTVLQRSSRHVRLSSSEVKLW*LTMTQR
Trigger: CCTCTGTGTCATTGTCAACAACCACAGCTTTACCTC...AGATGAAGATAATCTGACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCATCTTTATGGGTTCCTaGTCTGTCCTTCAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSIFMGS*SVLQGG
Trigger: ACCTCCCTGAAGGACAGACAAGGAACCCATAAAGAT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTCTGTATCTCTTCACCTaGGCAGGCCTGGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: TKATIQVFNNESFLARCGLYLFT*AGLDEK
Trigger: TTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACAG...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTATAATCCCAGTATTTaGGGGACAGAGGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLYNPSI*GTEVGG
Trigger: TCCTCCCACCTCTGTCCCCAAAATACTGGGATTATA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp GAGAGTTTATCAGAGGCTTGGATTGCTTCTATGTCTCTTTGCTGTGCTTATCTGTGCTTCTATGTCTCTTaGCTGTGCTTATCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ESLSEAWIASMSLCCAYLCFYVS*LCLSGR
Trigger: CCTCCCAGATAAGCACAGCAAAGAGACATAGAAGCA...CAGATAAGCACAGCAAAGAGACATAGAAGCAATCCAAGCCTCTGATAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp ATATCAAATGAAACACTCCTAATGCCCTTCCACGCCCCAAGGCATTCCAGTTCAGAGTTTATCAGAGGCTaGGATTGCTTCTATGTCTCT +
Preference number: 5 (lower is better)
Translates to: ISNETLLMPFHAPRHSSSEFIRG*DCFYVS
Trigger: AGAGACATAGAAGCAATCCAAGCCTCTGATAAACTC...TGAACTGGAATGCCTTGGGGCGTGGAAGGGCATTAGGAGTGTTTCATTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCAACATGAAAGGTGGCTaGACAGCCAAGGACAGGTTT +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSNMKGG*TAKDRF
Trigger: AAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCGTCCTGCTATTTCTGTaGCAGTTACAACCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSVLLFL*QLQPED
Trigger: GTCTTCCGGTTGTAACTGCAACAGAAATAGCAGGAC...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS TCA 90 bp CCATCTCCATTTCCACTTTCGTCACATTATTGTGTATATGCACTGTaGACCCAAGCCACTGGAACACATGACTCAGGATCTCATTACTAC +
Preference number: 5 (lower is better)
Translates to: PSPFPLSSHYCVYAL*TQATGTHDSGSHYY
Trigger: GTAGTAATGAGATCCTGAGTCATGTGTTCCAGTGGCTTGGGTTCACAGTGCATATACACAATAATGTGACGAAAGTGGAAATGGAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313728.11
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGAAGCTCCCATTTGCTaGGGAAGAGACTTCAAGACT +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVEAPIC*GRDFKT
Trigger: AGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp TTAGGTACAACTGTTTTGCAGAGGTCCTCCAGGCATGTCAGATTATCTTCATCTCAAAGAAGCTCCCATTaGCTTGGGAAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: LGTTVLQRSSRHVRLSSSQRSSH*LGKRLQ
Trigger: TTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTTG...AGATGAAGATAATCTGACATGCCTGGAGGACCTCTGCAAAACAGTTGTACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp ACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGGTGTGGTATACCAATGTTGACCTaGAGATTTCATGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: TKATIQVFNNESFLARCGIPMLT*RFHGQP
Trigger: AGGCTGGCCATGAAATCTCAAGGTCAACATTGGTAT...ACCACACCTGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCCTATGCAGAGAAACTaGAGGTTCTCCACATCTTGG +
Preference number: 5 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGPMQRN*RFSTSW
Trigger: CCAAGATGTGGAGAACCTCAAGTTTCTCTGCATAGG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIFSSFL*GTNPMQ
Trigger: CTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATG +
Preference number: 5 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPDFSSF*LGTNPM
Trigger: CATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTC...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATTCCTCTTTGGTACAGTaGAGGTGCTGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNSSLVQ*RCCSSF
Trigger: GAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGA...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGTAAAGCTGTGGTTGTaGACAATGACACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVVKLWL*TMTQRP
Trigger: AGGCCTCTGTGTCATTGTCAACAACCACAGCTTTAC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCCTGTATCTCTTCACCTaGGCAGGCCTGGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGLYLFT*AGLDEK
Trigger: TTTTTCATCCAGGCCTGCCAAGGTGAAGAGATACAG...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCACGACTCACATCATCGTaGACAGCAGTGAGGATGGAT +
Preference number: 5 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPRLTSS*TAVRMD
Trigger: ATCCATCCTCACTGCTGTCAACGATGATGTGAGTCG...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATCTTGGGCCTAGGAGTTaGAAACCAGCCTGTGCAACA +
Preference number: 5 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNLGPRS*KPACAT
Trigger: TGTTGCACAGGCTGGTTTCAAACTCCTAGGCCCAAG...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGCTCACCATCCTTCACTaGCCTTCACATGTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVLTILH*PSHVSS
Trigger: AGAACTGACATGTGAAGGCAAGTGAAGGATGGTGAG...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGTGGAAATGCAGGGCTTaGATCTCCAGATCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVWKCRA*ISRSFA
Trigger: AGCAAAGGATCTGGAGATCAAAGCCCTGCATTTCCA...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS TCA 90 bp TATGCAGAGAAACTTGAGGTTCTCCACATCTTGGACCCCCAGGTTTaGATCAATAATCAGAAGCTTCTCACGAAAGCTCACTTTACAGTT +
Preference number: 5 (lower is better)
Translates to: YAEKLEVLHILDPQV*INNQKLLTKAHFTV
Trigger: AACTGTAAAGTGAGCTTTCGTGAGAAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCTCAAGTTTCTCTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCACTGGAATACCAATGTaGACCTTGAGATTTCATGGC +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSTGIPM*TLRFHG
Trigger: GCCATGAAATCTCAAGGTCAACATTGGTATTCCAGT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCACCTATGCAGAGAAACTaGAGGTTCTCCACATCTTGG +
Preference number: 5 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPPMQRN*RFSTSW
Trigger: CCAAGATGTGGAGAACCTCAAGTTTCTCTGCATAGG...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATG +
Preference number: 5 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNDFSSF*LGTNPM
Trigger: CATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTC...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCGAGGTCATTTCAGTTTaGGGAAGCGAGTCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGEVISV*GSESFR
Trigger: TCTGAAAGACTCGCTTCCCAAAACTGAAATGACCTC...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp TTTTGCAGAGGTCCTCCAGGCATGTCAGATTATCTTCATCTATTTTACCTTGTTGTAAAGCTGTGGTTGTaGACAATGACACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FCRGPPGMSDYLHLFYLVVKLWL*TMTQRP
Trigger: AGGCCTCTGTGTCATTGTCAACAACCACAGCTTTAC...AACAAGGTAAAATAGATGAAGATAATCTGACATGCCTGGAGGACCTCTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438843.5
CDS-3UTR CAA 90 bp CATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAATGAAAGTTTTCTGGCCAGAGGTAAAGCTGTGGTaGTTGACAATGACACAGAGG +
Preference number: 5 (lower is better)
Translates to: HPKPRLQSKSSIMKVFWPEVKLW*LTMTQR
Trigger: CCTCTGTGTCATTGTCAACAACCACAGCTTTACCTC...TGGCCAGAAAACTTTCATTATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAGTCCTGATTCAAGCTTaGCCTGAAGCCAGTGTTATC +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIVLIQA*PEASVI
Trigger: GATAACACTGGCTTCAGGCAAAGCTTGAATCAGGAC...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGGTTATGAACACGGTTTaGGGAGATCATCCTGACACA +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVVMNTV*GDHPDT
Trigger: TGTGTCAGGATGATCTCCCAAAACCGTGTTCATAAC...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CAAATAAAAACTTCCTATGTGAGCACCTTCCTTACACAAAAGCAGGAAATGGGCGTTATGAACACGGTTTaGGGAGATCATCCTGACACA +
Preference number: 5 (lower is better)
Translates to: QIKTSYVSTFLTQKQEMGVMNTV*GDHPDT
Trigger: TGTGTCAGGATGATCTCCCAAAACCGTGTTCATAAC...GCCCATTTCCTGCTTTTGTGTAAGGAAGGTGCTCACATAGGAAGTTTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CCTCTGTCAAGCTACATTCAAATCCACATGACAATCAGAGATATCAGAACAGTGAATGCTAGTGCTGAGTaGCCGCTAATAAAGTCAGCT +
Preference number: 5 (lower is better)
Translates to: PLSSYIQIHMTIRDIRTVNASAE*PLIKSA
Trigger: AGCTGACTTTATTAGCGGCAACTCAGCACTAGCATT...CACTGTTCTGATATCTCTGATTGTCATGTGGATTTGAATGTAGCTTGACAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS CCA 90 bp TCAGAAGCTTCTCACGAAAGCTCACTTTACAGTTTTTATCTGAACTaGAATACCAATGTTGACCTTGAGATTTCATGGCCAGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SEASHESSLYSFYLN*NTNVDLEISWPAFR
Trigger: TCTGAAGGCTGGCCATGAAATCTCAAGGTCAACATTGGTATTCCAGTTCAGATAAAAACTGTAAAGTGAGCTTTCGTGAGAAGCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
CDS-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATGTAAAGCTGTGGTTGTaGACAATGACACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNVKLWL*TMTQRP
Trigger: AGGCCTCTGTGTCATTGTCAACAACCACAGCTTTAC...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp AATGCTCAAAATCTTAATGAAGAAAGCATCAAGGCGTCCTTACAGAGCCACTCCAGATGTCTTCATGTCTaGGGACCAATTTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: NAQNLNEESIKASLQSHSRCLHV*GPISSD
Trigger: ATCTGAAGAAATTGGTCCCAAGACATGAAGACATCT...GGAGTGGCTCTGTAAGGACGCCTTGATGCTTTCTTCATTAAGATTTTGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATATTCTTTGTTCCCTGTTaGTCCACTCTTCGACTCACA +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIFFVPC*STLRLT
Trigger: TGTGAGTCGAAGAGTGGACAAACAGGGAACAAAGAA...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAATGCTAGTGCTGAGTaGCCGCTAATAAAGTCAGCT +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSINASAE*PLIKSA
Trigger: AGCTGACTTTATTAGCGGCAACTCAGCACTAGCATT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATATACCAATGTTGACCTaGAGATTTCATGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNIPMLT*RFHGQP
Trigger: AGGCTGGCCATGAAATCTCAAGGTCAACATTGGTAT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAACTGGAATACCAATGTaGACCTTGAGATTTCATGGC +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSITGIPM*TLRFHG
Trigger: GCCATGAAATCTCAAGGTCAACATTGGTATTCCAGT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS TCA 90 bp AATAATCAGAAGCTTCTCACGAAAGCTCACTTTACAGTTTTTATCTaGACTGGAATACCAATGTTGACCTTGAGATTTCATGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: NNQKLLTKAHFTVFI*TGIPMLTLRFHGQP
Trigger: AGGCTGGCCATGAAATCTCAAGGTCAACATTGGTATTCCAGTTCAGATAAAAACTGTAAAGTGAGCTTTCGTGAGAAGCTTCTGATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
CDS CCA 90 bp TCAAAACATCATGCATGGCCAATTGGTTTAAGAATTTCCATGGTCTaGTCCAAGTTAGCAATCACAAGCTACTTACCTTTCTCTCTTTTG +
Preference number: 5 (lower is better)
Translates to: SKHHAWPIGLRISMV*SKLAITSYLPFSLL
Trigger: CAAAAGAGAGAAAGGTAAGTAGCTTGTGATTGCTAACTTGGACCAGACCATGGAAATTCTTAAACCAATTGGCCATGCATGATGTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485408.1
CDS-3UTR CAA 90 bp CTCTGTCTTCAGAATAGACATCCAAAACCAAGGCTACAATCCAAGTCTTCAATAAGATGTCTTCATGTCTaGGGACCAATTTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LCLQNRHPKPRLQSKSSIRCLHV*GPISSD
Trigger: ATCTGAAGAAATTGGTCCCAAGACATGAAGACATCT...TATTGAAGACTTGGATTGTAGCCTTGGTTTTGGATGTCTATTCTGAAGACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
CDS-3UTR CAA 90 bp AACATGAAAGGTGGCTTGACAGCCAAGGACAGGTTTATTTTAGAGAAAACAAATAAAGAAGTGATTTCCTaGAAATGCATGAGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: NMKGGLTAKDRFILEKTNKEVIS*KCMRLE
Trigger: TTCTAGCCTCATGCATTTCAAGGAAATCACTTCTTT...ATTTGTTTTCTCTAAAATAAACCTGTCCTTGGCTGTCAAGCCACCTTTCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286186.11
ENST00000360132.7
CDS CCA 72 bp CTGGAAAGAACTAGGAAACGCTGCTCCACCTGCGCATaGGGGGTCGAGGTGTCTGCGCAGAGATGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: LERTRKRCSTCA*GVEVSAQRWPW
Trigger: CCACGGCCATCTCTGCGCAGACACCTCGACCCCCCATGCGCAGGTGGAGCAGCGTTTCCTAGTTCTTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272879.9
ENST00000448480.1
CDS CAA 72 bp GCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTaGCCAAGCTCCAGGAGCTACAGGTCATCTGGCGAG +
Preference number: 6 (lower is better)
Translates to: ACIVFRWAFAQP*PSSRSYRSSGE
Trigger: CTCGCCAGATGACCTGTAGCTCCTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS CAA 90 bp GTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTGCCCAGCCTTaGCCAAGCTCCAGGAGCTACAGGTCATCTGGCGAGTTTCCACGG +
Preference number: 6 (lower is better)
Translates to: VLIACIVFRWAFAQP*PSSRSYRSSGEFPR
Trigger: CCGTGGAAACTCGCCAGATGACCTGTAGCTCCTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS TCA 72 bp TGTCTGCGCAGAGATGGCCGTGGGCAGGGAGGTTGCTaGGATCTGTTTAGCACCCCACACTGTTCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: CLRRDGRGQGGC*DLFSTPHCSLP
Trigger: AGGAAGAGAACAGTGTGGGGTGCTAAACAGATCTCAGCAACCTCCCTGCCCACGGCCATCTCTGCGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272879.9
ENST00000448480.1
CDS GCA 72 bp TGTCCTGATTGCCTGCATAGTCTTCAGGTGGGCGTTTaGCCAGCCTTTGCCAAGCTCCAGGAGCTACAGGTC +
Preference number: 6 (lower is better)
Translates to: CPDCLHSLQVGV*PAFAKLQELQV
Trigger: GACCTGTAGCTCCTGGAGCTTGGCAAAGGCTGGGCAAACGCCCACCTGAAGACTATGCAGGCAATCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374650.7
CDS CAA 90 bp CCCATCTCCACCACAGACCCGTCCTCACCTAAACAGAGAAACCCTTaGTCGGGTGGGCAGCAGTCGCTCCACTTCCTCTTTGGTACAGTT +
Preference number: 6 (lower is better)
Translates to: PISTTDPSSPKQRNP*SGGQQSLHFLFGTV
Trigger: AACTGTACCAAAGAGGAAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTTCTCTGTTTAGGTGAGGACGGGTCTGTGGTGGAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484926.1
CDS GCA 72 bp AGATGCTCCTTGCATCCCCCTGGAGACCAGGCTTGGTaGACCATTTGTGGCTCTGTTACCATTACTACCTGC +
Preference number: 6 (lower is better)
Translates to: RCSLHPPGDQAW*TICGSVTITTC
Trigger: GCAGGTAGTAATGGTAACAGAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000460140.5
CDS CCA 72 bp AGCAGATGCTCCTTGCATCCCCCTGGAGACCAGGCTTaGTGCACCATTTGTGGCTCTGTTACCATTACTACC +
Preference number: 6 (lower is better)
Translates to: SRCSLHPPGDQA*CTICGSVTITT
Trigger: GGTAGTAATGGTAACAGAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAGCATCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000460140.5
CDS CAA 72 bp GTGGGCAGCAGTCGCTCCACTTCCTCTTTGGTACAGTaGAGGTGCTGCAGCAGCTTCTTCTGCCGTATGATA +
Preference number: 6 (lower is better)
Translates to: VGSSRSTSSLVQ*RCCSSFFCRMI
Trigger: TATCATACGGCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCGACTGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CAA 90 bp AGAGAAACCCTTTGTCGGGTGGGCAGCAGTCGCTCCACTTCCTCTTaGGTACAGTTGAGGTGCTGCAGCAGCTTCTTCTGCCGTATGATA +
Preference number: 6 (lower is better)
Translates to: RETLCRVGSSRSTSS*VQLRCCSSFFCRMI
Trigger: TATCATACGGCAGAAGAAGCTGCTGCAGCACCTCAACTGTACCAAAGAGGAAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CCA 72 bp AAGCTGTGGTTGTTGACAATGACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTACACAGCTGCCCTCGGT +
Preference number: 6 (lower is better)
Translates to: KLWLLTMTQRPL*FRFILYTAALG
Trigger: ACCGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGTCAACAACCACAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346817.9
ENST00000448480.1
CDS CCA 72 bp AACAAACAGCTCGGAGCCCTTAAAATCATCGAAGGCTaGACCCTAGGGAGAGAGCCCCTAAAGAAACCGTCC +
Preference number: 6 (lower is better)
Translates to: NKQLGALKIIEG*TLGREPLKKPS
Trigger: GGACGGTTTCTTTAGGGGCTCTCTCCCTAGGGTCCAGCCTTCGATGATTTTAAGGGCTCCGAGCTGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460140.5
CDS GCA 72 bp CTGGTTTCAGAGTTTAGAGTGTTAGCAGATGCTCCTTaGATCCCCCTGGAGACCAGGCTTGGTGCACCATTT +
Preference number: 6 (lower is better)
Translates to: LVSEFRVLADAP*IPLETRLGAPF
Trigger: AAATGGTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAACACTCTAAACTCTGAAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000460140.5
CDS CAA 72 bp CTTGCATCCCCCTGGAGACCAGGCTTGGTGCACCATTaGTGGCTCTGTTACCATTACTACCTGCATGCTTAT +
Preference number: 6 (lower is better)
Translates to: LASPWRPGLVHH*WLCYHYYLHAY
Trigger: ATAAGCATGCAGGTAGTAATGGTAACAGAGCCACAAATGGTGCACCAAGCCTGGTCTCCAGGGGGATGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000460140.5
CDS GCA 72 bp CAGCAGCTTCTTCTGCCGTATGATATAGAGGAGTTCTaGCAGGAAGAAAGGGTCTTCCTCACTCAGCAGATC +
Preference number: 6 (lower is better)
Translates to: QQLLLPYDIEEF*QEERVFLTQQI
Trigger: GATCTGCTGAGTGAGGAAGACCCTTTCTTCCTGGCAGAACTCCTCTATATCATACGGCAGAAGAAGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CCA 72 bp AAGCTGTGGTTGTTGACAATGACACAGAGGCCTCTGTaGTTCCGATTCATCCTGTACACAGCTGCCCTCTTT +
Preference number: 6 (lower is better)
Translates to: KLWLLTMTQRPL*FRFILYTAALF
Trigger: AAAGAGGGCAGCTGTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGTCAACAACCACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272879.9
ENST00000286186.11
CDS CAA 72 bp ACATCTGAGGCTGAGCTGGACTTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAGAGAAACTTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: TSEAELDFSSFL*GTNPMQRNLRF
Trigger: GAACCTCAAGTTTCTCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS GCA 72 bp GTGGCTCTGTTACCATTACTACCTGCATGCTTATTTTaGCAGGACTCCTGCGGTAAGGCTTCCAAGAATGTC +
Preference number: 6 (lower is better)
Translates to: VALLPLLPACLF*QDSCGKASKNV
Trigger: GACATTCTTGGAAGCCTTACCGCAGGAGTCCTGGCAAAATAAGCATGCAGGTAGTAATGGTAACAGAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000460140.5
CDS CCA 72 bp CTGCCAAGAGATGTTCAAAAACATCTGAGGCTGAGCTaGACTTCTCCAGCTTCTTGTTGGGGACCAATCCTA +
Preference number: 6 (lower is better)
Translates to: LPRDVQKHLRLS*TSPASCWGPIL
Trigger: TAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATGTTTTTGAACATCTCTTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CAA 72 bp AAAACATCTGAGGCTGAGCTGGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATGCAGAGAAACTTGAGG +
Preference number: 6 (lower is better)
Translates to: KTSEAELDFSSF*LGTNPMQRNLR
Trigger: CCTCAAGTTTCTCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CAA 90 bp GACTTCTCCAGCTTCTTGTTGGGGACCAATCCTATGCAGAGAAACTaGAGGTTCTCCACATCTTGGACCCCCAGGTTTGAATCAATAATC +
Preference number: 6 (lower is better)
Translates to: DFSSFLLGTNPMQRN*RFSTSWTPRFESII
Trigger: GATTATTGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCTCAAGTTTCTCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CAA 90 bp TGTTCAAAAACATCTGAGGCTGAGCTGGACTTCTCCAGCTTCTTGTaGGGGACCAATCCTATGCAGAGAAACTTGAGGTTCTCCACATCT +
Preference number: 6 (lower is better)
Translates to: CSKTSEAELDFSSFL*GTNPMQRNLRFSTS
Trigger: AGATGTGGAGAACCTCAAGTTTCTCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATGTTTTTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CAA 90 bp AGATGTTCAAAAACATCTGAGGCTGAGCTGGACTTCTCCAGCTTCTaGTTGGGGACCAATCCTATGCAGAGAAACTTGAGGTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: RCSKTSEAELDFSSF*LGTNPMQRNLRFST
Trigger: TGTGGAGAACCTCAAGTTTCTCTGCATAGGATTGGTCCCCAACAAGAAGCTGGAGAAGTCCAGCTCAGCCTCAGATGTTTTTGAACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CAA 72 bp CACATGACTCAGGATCTCAGCATCTTTATGGGTTCCTaGTCTGTCCTTCAGGGAGGTAAAGCTGTGGTTGTT +
Preference number: 6 (lower is better)
Translates to: HMTQDLSIFMGS*SVLQGGKAVVV
Trigger: AACAACCACAGCTTTACCTCCCTGAAGGACAGACAAGGAACCCATAAAGATGCTGAGATCCTGAGTCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000346817.9
ENST00000360132.7
ENST00000448480.1
ENST00000492363.5
CDS CCA 72 bp TGTGTGCTCCAAGGTCCAAAGAAGCTCCCATTTGCTTaGGAAGAGACTTCAAGACTTGCTGGTTGTTTAAGT +
Preference number: 6 (lower is better)
Translates to: CVLQGPKKLPFA*EETSRLAGCLS
Trigger: ACTTAAACAACCAGCAAGTCTTGAAGTCTCTTCCCAAGCAAATGGGAGCTTCTTTGGACCTTGGAGCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000360132.7
ENST00000438843.5
ENST00000460140.5
CDS TCA 72 bp AAACTTGAGGTTCTCCACATCTTGGACCCCCAGGTTTaGATCAATAATCAGAAGCTTCTCACGAAAGCTCAC +
Preference number: 6 (lower is better)
Translates to: KLEVLHILDPQV*INNQKLLTKAH
Trigger: GTGAGCTTTCGTGAGAAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCTCAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CCA 72 bp AATCCTATGCAGAGAAACTTGAGGTTCTCCACATCTTaGACCCCCAGGTTTGAATCAATAATCAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: NPMQRNLRFSTS*TPRFESIIRSF
Trigger: GAAGCTTCTGATTATTGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCTCAAGTTTCTCTGCATAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5
CDS CCA 72 bp CATGCATGGCCAATTGGTTTAAGAATTTCCATGGTCTaGTCCAAGTTAGCAATCACAAGCTACTTACCTTTC +
Preference number: 6 (lower is better)
Translates to: HAWPIGLRISMV*SKLAITSYLPF
Trigger: GAAAGGTAAGTAGCTTGTGATTGCTAACTTGGACCAGACCATGGAAATTCTTAAACCAATTGGCCATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485408.1
CDS CCA 72 bp TCTCACGAAAGCTCACTTTACAGTTTTTATCTGAACTaGAATACCAATGTTGACCTTGAGATTTCATGGCCA +
Preference number: 6 (lower is better)
Translates to: SHESSLYSFYLN*NTNVDLEISWP
Trigger: TGGCCATGAAATCTCAAGGTCAACATTGGTATTCCAGTTCAGATAAAAACTGTAAAGTGAGCTTTCGTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
CDS TCA 72 bp AAGCTTCTCACGAAAGCTCACTTTACAGTTTTTATCTaGACTGGAATACCAATGTTGACCTTGAGATTTCAT +
Preference number: 6 (lower is better)
Translates to: KLLTKAHFTVFI*TGIPMLTLRFH
Trigger: ATGAAATCTCAAGGTCAACATTGGTATTCCAGTTCAGATAAAAACTGTAAAGTGAGCTTTCGTGAGAAGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000272879.9
ENST00000286186.11
ENST00000313728.11
ENST00000346817.9
ENST00000360132.7
ENST00000374650.7
ENST00000438843.5
ENST00000448480.1
ENST00000460140.5
ENST00000484926.1
ENST00000492363.5