Pregenerated sensors for CASP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000137752Ensembl transcript IDs: ENST00000532439.5, ENST00000533400.6
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAGCGCTCACACAGTGTTaGATTTTAGAGCATTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SIFCIWLDYPLSKMHATRALTQC*ILEHFK Trigger: TTTGAAATGCTCTAAAATCCAACACTGTGTGAGCGC...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| 3UTR-3UTR CCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGACAGCTGTATACTTACTaGTTTAGCATCCCTAATCCA | + |
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Preference number: 2 (lower is better) Translates to: SIFCIWLDYPLSKMHATRQLYTY*FSIPNP Trigger: TGGATTAGGGATGCTAAACCAGTAAGTATACAGCTG...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| 3UTR-3UTR TCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAAATAAACATTTCCTTTaGATATCATGTGGGCGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SIFCIWLDYPLSKMHATRNKHFL*ISCGRS Trigger: TGAGCGCCCACATGATATTCAAAGGAAATGTTTATT...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR TCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAAGATGTTTGATCTGCTaGGAGTCCCAGCGTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATRRCLIC*ESQRPC Trigger: GCAGGGACGCTGGGACTCTCAGCAGATCAAACATCT...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR TCA 90 bp | CTTAGTCACTCTAAGTTCCAGTCCCTGTTTCTTCAGTGTGGGAGAAAAATGAGGTCCAGAAACTCCTACTaGATCTTTAAACCACACCAC | + |
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Preference number: 4 (lower is better) Translates to: LSHSKFQSLFLQCGRKMRSRNSY*IFKPHH Trigger: GTGGTGTGGTTTAAAGATTCAGTAGGAGTTTCTGGA...CCTCATTTTTCTCCCACACTGAAGAAACAGGGACTGGAACTTAGAGTGACTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000532439.5 |
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| CDS-3UTR CCA 90 bp | TTCCTTAGTCACTCTAAGTTCCAGTCCCTGTTTCTTCAGTGTGGGAGAAAAATGCCAAGAAACATTATCTaGTGTGGAAGAGCAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FLSHSKFQSLFLQCGRKMPRNII*CGRAES Trigger: GCTTTCTGCTCTTCCACACCAGATAATGTTTCTTGG...CATTTTTCTCCCACACTGAAGAAACAGGGACTGGAACTTAGAGTGACTAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000532439.5 |
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| CDS-3UTR CCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGACACTGCCTGAGGAGCTaGAAAGGAAGAAAGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATRHCLRS*KGRKYS Trigger: GGAGTACTTTCTTCCTTTCCAGCTCCTCAGGCAGTG...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR TCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGATCCAGAAACTCCTACTaGATCTTTAAACCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATRSRNSY*IFKPHH Trigger: GTGGTGTGGTTTAAAGATTCAGTAGGAGTTTCTGGA...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR CCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGACCAAGAAACATTATCTaGTGTGGAAGAGCAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATRPRNII*CGRAES Trigger: GCTTTCTGCTCTTCCACACCAGATAATGTTTCTTGG...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR TCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAGAAGAAAGTACTCCTTaGGAGTCTTGCATATTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATREESTP*ESCILR Trigger: CCTTAATATGCAAGACTCTCAAGGAGTACTTTCTTC...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR TCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGATTAAATATACCCTGCTaGGGTGAAGGAGAGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATRLNIPC*GEGEKH Trigger: ATGTTTCTCTCCTTCACCTCAGCAGGGTATATTTAA...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR GCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAATGAAAATCGAACCTTaGGGAAAATTTCCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATRMKIEP*GKFPPH Trigger: ATGTGGAGGAAATTTTCCGCAAGGTTCGATTTTCAT...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR GCA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAATCCCTTATCCAAAATaGATGCTACCAGAAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: SIFCIWLDYPLSKMHATRIPYPK*MLPEVF Trigger: AAATACTTCTGGTAGCATGCATTTTGGATAAGGGAT...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR CAA 90 bp | TTCCAGTCCCTGTTTCTTCAGTGTGGGAGAAAAATGAGGACAAGTTTTCATTTTGATCTCTTCACTTCCTaGCGGAAAATTTCCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: FQSLFLQCGRKMRTSFHFDLFTS*RKISST Trigger: TGTGGAGGAAATTTTCCGCAAGGAAGTGAAGAGATC...AAAATGAAAACTTGTCCTCATTTTTCTCCCACACTGAAGAAACAGGGACTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000532439.5 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAAATGAAAATCGAACCTaGCGGAAAATTTCCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SIFCIWLDYPLSKMHATRNENRT*RKISST Trigger: TGTGGAGGAAATTTTCCGCAAGGTTCGATTTTCATT...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGAGGAAGAAAGTACTCCTaGAGAGTCTTGCATATTAAG | + |
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Preference number: 5 (lower is better) Translates to: SIFCIWLDYPLSKMHATRGRKYS*RVLHIK Trigger: CTTAATATGCAAGACTCTCAAGGAGTACTTTCTTCC...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGATTGACTTGTCCATTATaGGATAAATCTCTGCCGACT | + |
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Preference number: 5 (lower is better) Translates to: SIFCIWLDYPLSKMHATRLTCPL*DKSLPT Trigger: AGTCGGCAGAGATTTATCCAATAATGGACAAGTCAA...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCTGTATATGGCTTGATTATCCCTTATCCAAAATGCATGCTACCAGATACTCCTTGAGAGTCTaGCATATTAAGGTAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: SIFCIWLDYPLSKMHATRYSLRV*HIKVIS Trigger: GGAAATTACCTTAATATGCAAGACTCTCAAGGAGTA...TCTGGTAGCATGCATTTTGGATAAGGGATAATCAAGCCATATACAGAAAATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533400.6 |
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