RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASKIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000177303

Ensembl transcript IDs: ENST00000321617.8, ENST00000433559.6, ENST00000580021.1, ENST00000580075.1, ENST00000581870.1, ENST00000583246.1, ENST00000583258.5

Found 584 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTaGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAG +
Preference number: 1 (lower is better)
Translates to: FAEMQRRSLASQVLR*AAPQELWCPQPRAE
Trigger: CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR GCA 90 bp ACCCCTGCTAGCCCTGCCTCAGTGAGGGAAGGCGGGGGCAGGAGCTaGCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCT +
Preference number: 1 (lower is better)
Translates to: TPASPASVREGGGRS*LGTTAVYLHVLCTP
Trigger: AGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCCCGCCTTCCCTCACTGAGGCAGGGCTAGCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR GCA 90 bp GGAGAGAGCTCTTACCAGGGTCCCTGTCCAGGAGCAGGGCTGTCCTaGTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGC +
Preference number: 1 (lower is better)
Translates to: GESSYQGPCPGAGLS*SIDQTLGGALLRCS
Trigger: GCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCTGGACAGGGACCCTGGTAAGAGCTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR TCA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCCACAGCCGCGGGCTaGGTGGGAAGGGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: GLGQWGQALPALRWAVGAPTAAG*VGRGPA
Trigger: AGCAGGGCCCCTTCCCACTCAGCCCGCGGCTGTGGG...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR CCA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCAGCCGCGGGCTGAGTaGGAAGGGGCCCTGCTAGGA +
Preference number: 2 (lower is better)
Translates to: GLGQWGQALPALRWAVGAQPRAE*EGALLG
Trigger: TCCTAGCAGGGCCCCTTCCCACTCAGCCCGCGGCTG...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR TCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTAGGGGCACTTCAGCCTaGCCAGCCCTTGGCCCGTCC +
Preference number: 2 (lower is better)
Translates to: QVLRWAAPQELWCPQPRARGTSA*PALGPS
Trigger: GGACGGGCCAAGGGCTGGTCAGGCTGAAGTGCCCCT...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTGGGGCAGGAGCTGCCTaGGCACCACCGCTGTGTATT +
Preference number: 2 (lower is better)
Translates to: LGQWGQALPALRWAVGAPGAGAA*APPLCI
Trigger: AATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC...AGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR CCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCGCCCCACAAGAGCTGTaGTGCCCACAGCCGCGGGCT +
Preference number: 2 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVAPQEL*CPQPRA
Trigger: AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGC...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR GCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCCCACAAGAGCTGTGGTaGCCACAGCCGCGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVPQELW*PQPRAE
Trigger: CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGG...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGGGCCCGTCCCTAGGGTaGCAGGGGCCTCTTCTGTGC +
Preference number: 2 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRGPSLG*QGPLLC
Trigger: GCACAGAAGAGGCCCCTGCCACCCTAGGGACGGGCC...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCCTGACCAGCCCTTaGCCCGTCCCTAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVSLTSP*PVPRVA
Trigger: TGCCACCCTAGGGACGGGCCAAGGGCTGGTCAGGCT...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTCAGCCGCGGGCTGAGTaGGAAGGGGCCCTGCTAGGA +
Preference number: 2 (lower is better)
Translates to: GFAEMQRRSLASQVLRWAQPRAE*EGALLG
Trigger: TCCTAGCAGGGCCCCTTCCCACTCAGCCCGCGGCTG...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGCCTGACCAGCCCTTaGCCCGTCCCTAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRSLTSP*PVPRVA
Trigger: TGCCACCCTAGGGACGGGCCAAGGGCTGGTCAGGCT...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGGCCCCACAAGAGCTGTaGTGCCCACAGCCGCGGGCT +
Preference number: 2 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMAPQEL*CPQPRA
Trigger: AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGC...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR GCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTCAGGGGCCTCTTCTGTaGTGGGGCAAAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: GFAEMQRRSLASQVLRWAQGPLL*WGKGSG
Trigger: TCCACTGCCTTTGCCCCAGCACAGAAGAGGCCCCTG...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCTGGGGCAAAGGCAGTaGACTTCGGCAGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQLGQRQ*TSAGHS
Trigger: ACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR GCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGGGTTCTAAGGTGGGCTaGCCCACAAGAGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAEGSKVG*PTRAVV
Trigger: CACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACC...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACTGGGGCAAAGGCAGTaGACTTCGGCAGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARLGQRQ*TSAGHS
Trigger: ACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAG...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR GCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACCAGGGGCCTCTTCTGTaGTGGGGCAAAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYQGPLL*WGKGSG
Trigger: TCCACTGCCTTTGCCCCAGCACAGAAGAGGCCCCTG...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR GCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTTCTAAGGTGGGCTaGCCCACAAGAGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGGSKVG*PTRAVV
Trigger: CACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACC...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR-3UTR CCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCACTTGGGACATGGGCTaGGGGGTACAGAGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTTWDMG*GVQRKH
Trigger: GTGCTTTCTCTGTACCCCCCAGCCCATGTCCCAAGT...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR CCA 72 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTaGGCAGTCGGGGCTCCTGCTGTGGTCCGAAGCCCC +
Preference number: 3 (lower is better)
Translates to: LGQWGQALPALR*AVGAPAVVRSP
Trigger: GGGGCTTCGGACCACAGCAGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR CAA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCACCCTGGGAGGGGCTTaGCTGAGATGCAGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSTLGGA*LRCSGG
Trigger: ACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGT...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR-3UTR CAA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTGAAGCCCCTCCCCCATaGTGTCCTCTCAGGCAGTTG +
Preference number: 3 (lower is better)
Translates to: GLGQWGQALPALRWAVGAEAPPP*CPLRQL
Trigger: CAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTC...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR CCA 72 bp CCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGTaGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: PQELWCPQPRAE*EGALLGGALQP
Trigger: AGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR GCA 72 bp AGCCCTGCCTCAGTGAGGGAAGGCGGGGGCAGGAGCTaGCTGGGCACCACCGCTGTGTATTTACATGTCCTC +
Preference number: 3 (lower is better)
Translates to: SPASVREGGGRS*LGTTAVYLHVL
Trigger: GAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCCCGCCTTCCCTCACTGAGGCAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
3UTR CCA 72 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTaGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCG +
Preference number: 3 (lower is better)
Translates to: MQRRSLASQVLR*AAPQELWCPQP
Trigger: CGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
3UTR CCA 72 bp TTGGGGGAAGAGGTTAATGGTTACAGAGCCAGGGCCTaGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: LGEEVNGYRARA*ANGVRLSLPSG
Trigger: ACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCCCTGGCTCTGTAACCATTAACCTCTTCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCAGCGGGGCCAGGCGTaGCACTGGCCACTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AWANGVRLSLPSGGQSGLQRGQA*HWPLRR
Trigger: CCTTCGGAGTGGCCAGTGCCACGCCTGGCCCCGCTG...GAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTTGGGCAGGGCGGCACTaGAGGCTGCATGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLGQWGQALPALRWAVGAWAGRH*RLHGGA
Trigger: AGCCCCGCCATGCAGCCTCCAGTGCCGCCCTGCCCA...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGGCGCCCGCCTTCGCTaGGGGCCTCCCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAGARLR*GPPPAA
Trigger: TGCTGCAGGGGGAGGCCCTCAGCGAAGGCGGGCGCC...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGCTCCTCCTCCGTGTCTaGCGCGGGCCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAELLLRV*RGPSRG
Trigger: GCCCCGGCTGGGCCCGCGTCAGACACGGAGGAGGAG...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTGTCTGCTCCAGTCTCTaGTGGGCCTGGCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GLGQWGQALPALRWAVGAVCSSL*WAWPGP
Trigger: GGGCCCAGGCCAGGCCCAGCAGAGACTGGAGCAGAC...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCGGCAGTCGGGGCTCCTaGTGTGGTCCGAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AWANGVRLSLPSGGQSGLGSRGS*CGPKPL
Trigger: GAGGGGCTTCGGACCACAGCAGGAGCCCCGACTGCC...GAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCCCCCAGAGCGGCAGTTaGCCAGAGGGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSPQSGS*PEGGGS
Trigger: TGAGCCACCGCCCTCTGGCCAACTGCCGCTCTGGGG...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCGCCCCACAAGAGCTGTaGTGCCCACAGCCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSAPQEL*CPQPRA
Trigger: AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGC...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCCCACAGCCGCGGGCTaGGTGGGAAGGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAPTAAG*VGRGPA
Trigger: AGCAGGGCCCCTTCCCACTCAGCCCGCGGCTGTGGG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGGCCCGCTGCCGGCACTaGGGATGCTGCCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLARCRH*GCCPRC
Trigger: GCAGCGTGGGCAGCATCCGCAGTGCCGGCAGCGGGC...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCGCAGCAGCGGTGCACTaGTCTCAGGGCTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSAAAVH*SQGSLP
Trigger: CGGGAGAGAGCCCTGAGACCAGTGCACCGCTGCTGC...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGGGTGCGCCAGGAGGTaGCCCTGGGGCCGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAGCARR*PWGRAR
Trigger: TCTAGCCCGGCCCCAGGGCCACCTCCTGGCGCACCC...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCGCTGCCCTGGAAGGTaGGGAGCCGTGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRARCPGR*GAVGQL
Trigger: CAGCTGGCCCACGGCTCCTCACCTTCCAGGGCAGCG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGGCCAGGGACGGCGGGTaGAGTCCTGGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLARDGG*SPGSTW
Trigger: CCAGGTGCTGCCAGGACTCCACCCGCCGTCCCTGGC...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGGGCCACCCCCTGCCATaGCCGCCTGTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLGHPLP*PPVALG
Trigger: GCCCAGAGCTACAGGCGGCCATGGCAGGGGGTGGCC...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCGGGGTTGGAACTCCTTaGGCTGGAAGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AWANGVRLSLPSGGQSGLGVGTP*AGRLLG
Trigger: GCCCAGCAGCCTTCCAGCCCAAGGAGTTCCAACCCC...GAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGCGCTGCCCTGGAAGGTaGGGAGCCGTGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGRCPGR*GAVGQL
Trigger: CAGCTGGCCCACGGCTCCTCACCTTCCAGGGCAGCG...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTTGGGCCAGGGGGCTCTaGGGGGCCAGCAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAWARGL*GASRFT
Trigger: AGTGAACCTGCTGGCCCCTCAGAGCCCCCTGGCCCA...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGCTGCTCCGGGCACCTTaGGGAGGGCAGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWLLRAP*GGQQGR
Trigger: CCGCCCCTGCTGCCCTCCTCAAGGTGCCCGGAGCAG...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGGGGTCCGGCTGGCCCTaGTCGGTCCCTGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGGSGWP*SVPGTQ
Trigger: CTGAGTGCCAGGGACCGAGCAGGGCCAGCCGGACCC...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCGGCACTGCGGATGCTaGCCACGCTGCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRARHCGC*PRCPHC
Trigger: GCAGTGAGGGCAGCGTGGGCAGCATCCGCAGTGCCG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCAGAGCTCTGCCCGCTaGCGGCACTGCGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAQSSAR*RHCGCC
Trigger: GCAGCATCCGCAGTGCCGGCAGCGGGCAGAGCTCTG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTCCGTTGGGATGTAGCTaGGCAGCCACTCGGCGATGC +
Preference number: 4 (lower is better)
Translates to: LGQWGQALPALRWAVGAPPLGCS*AATRRC
Trigger: GCATCGCCGAGTGGCTGCCCAGCTACATCCCAACGG...AGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGTCAGCTCCGGACCCTTaGCCAGCCGGCGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGSAPDP*PAGARL
Trigger: AAGGCGGGCGCCGGCTGGCCAAGGGTCCGGAGCTGA...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGAGTTGGGGAAGGCAGTaGGGCAGCGGGGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLSWGRQ*GSGARR
Trigger: ACGCCTGGCCCCGCTGCCCCACTGCCTTCCCCAACT...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGAGTGCTCTCAGGCCGTaGAGGAGGCACTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAESALRP*RRHWAG
Trigger: CCCCGCCCAGTGCCTCCTCCACGGCCTGAGAGCACT...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCTCCCTGCCCTCAGGTaGGCAGTCGGGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRALPALR*AVGAPA
Trigger: AGCAGGAGCCCCGACTGCCCACCTGAGGGCAGGGAG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCAGGGCCTGGGCCAATaGGGTCAGGCTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAQGLGQ*GQALPA
Trigger: GGCAGGGAGAGCCTGACCCCATTGGCCCAGGCCCTG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTACTGGCTCCTGGGCTaGGCTCTACACTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSYWLLG*ALHSGV
Trigger: GACTCCTGAGTGTAGAGCTCAGCCCAGGAGCCAGTA...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGGCGCCCGCCTTCGCTaGGGGCCTCCCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAGARLR*GPPPAA
Trigger: TGCTGCAGGGGGAGGCCCTCAGCGAAGGCGGGCGCC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGAGGGGCACTTCAGCCTaGCCAGCCCTTGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGRGTSA*PALGPS
Trigger: GGACGGGCCAAGGGCTGGTCAGGCTGAAGTGCCCCT...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCTTGACCCCAATCTCCTaGAGCTCCTCCCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AWANGVRLSLPSGGQSGLLTPIS*SSSQVR
Trigger: CCTCACCTGGGAGGAGCTGCAGGAGATTGGGGTCAA...GAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCTGAGGGCCTCCCCCTaGAGCAGGCCCCGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQLRASP*SRPRRS
Trigger: GCTTCGGCGGGGCCTGCTGCAGGGGGAGGCCCTCAG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCTTGGGCTGGAAGGCTaGTGGGCTCGGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRALGLEG*WARAGE
Trigger: TTCCCCAGCCCGAGCCCAGCAGCCTTCCAGCCCAAG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGCCACAAGAGCTGTGGTaGCCACAGCCGCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEPQELW*PQPRAE
Trigger: CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGG...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCCTGTTCAGAAGCAGCTaGGCCACCTTGAGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSLFRSS*ATLSRP
Trigger: TGGCCGACTCAAGGTGGCCCAGCTGCTTCTGAACAG...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGCCCCTCTGGCTCTCGTaGATGTGGCCCTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEPLWLS*MWPFQR
Trigger: CCGCTGGAAGGGCCACATCCACGAGAGCCAGAGGGG...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCGGTCTGTGCCCCTCTaGCTCTCGTGGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRARSVPL*LSWMWP
Trigger: GGGCCACATCCACGAGAGCCAGAGGGGCACAGACCG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCTGCTTGTGGTACTGTaGCAGCCCCAGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: GLGQWGQALPALRWAVGALLVVL*QPQCTQ
Trigger: CTGTGTGCACTGGGGCTGCCACAGTACCACAAGCAG...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCGATGCTCTCCTGGCTaGGAGAGCGGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRARCSPG*ESGQVG
Trigger: TCCCACCTGCCCGCTCTCCCAGCCAGGAGAGCATCG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCGGGTGCGCCAGGAGGTaGCCCTGGGGCCGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVGCARR*PWGRAR
Trigger: TCTAGCCCGGCCCCAGGGCCACCTCCTGGCGCACCC...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGAGGTCGAGGCGGGTCTaGGGGAGTGGCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQERSRRV*GSGRGP
Trigger: GGGCCCCCTGCCACTCCCCCAGACCCGCCTCGACCT...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGGCCTTCGGGGCCCTGTaGCCCCTTCCTTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWAFGAL*PLPWAL
Trigger: CAGGGCCCAAGGAAGGGGCCACAGGGCCCCGAAGGC...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGGCTTGGTGGAGGCGCTaGGGGTGCCCTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLAWWRR*GCPLAP
Trigger: AGGAGCAAGAGGGCACCCCCAGCGCCTCCACCAAGC...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGACTCCTCCTCCGTGTCTaGCGCGGGCCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGLLLRV*RGPSRG
Trigger: GCCCCGGCTGGGCCCGCGTCAGACACGGAGGAGGAG...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTCTGCTCCGGGCACCTTaGGGAGGGCAGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWALLRAP*GGQQGR
Trigger: CCGCCCCTGCTGCCCTCCTCAAGGTGCCCGGAGCAG...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCCCAGCTCTCAGGAGCTaGCTGATGACTTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSPALRS*LMTSLW
Trigger: CCACAGAGAAGTCATCAGGCAGCTCCTGAGAGCTGG...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCGGCACTGCGGATaGTGCCCACGCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWCRHCG*CPRCPH
Trigger: GTGAGGGCAGCGTGGGCAGCATCCGCAGTGCCGGCA...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCCTGAGGGCCTCCCCCTaGAGCAGGCCCCGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCLRASP*SRPRRS
Trigger: GCTTCGGCGGGGCCTGCTGCAGGGGGAGGCCCTCAG...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGAACTGCCTAGGGTGCTaGCCACTGGCCCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAENCLGC*PLALRP
Trigger: AGGCCGAAGGGCCAGTGGGCAGCACCCTAGGCAGTT...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGGGCTCTCAGTGCAGCTaGCAGGGACGAGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEGSQCS*QGRAGL
Trigger: CAGACCAGCTCGTCCCTGGCAGCTGCACTGAGAGCC...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCTCTGCGGCTCTCAGTaGAGCTGCCAGGGACGAGCT +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRALCGSQ*SCQGRA
Trigger: AGCTCGTCCCTGGCAGCTGCACTGAGAGCCGCAGAG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTGGTTCTAAGGTGGGCTaGCCCACAAGAGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGQWGQALPALRWAVGAPGSKVG*PTRAVV
Trigger: CACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACC...AGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGTGGCTCTCGTGGATGTaGCCCTTCCAGCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGWLSWM*PFQRPS
Trigger: CGACGGCCGCTGGAAGGGCCACATCCACGAGAGCCA...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGAGTCCTGGCAGCACCTaGTCCTCTCCAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLSPGST*SSPAEG
Trigger: GCCCTCTGCTGGAGAGGACCAGGTGCTGCCAGGACT...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGCGGCGGGTGGAGTCCTaGCAGCACCTGGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWRRVES*QHLVLS
Trigger: GGAGAGGACCAGGTGCTGCCAGGACTCCACCCGCCG...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGGCTTGGTCACCCCGATaGCCGTCAGGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLAWSPR*PSGPQV
Trigger: CACCTGAGGACCTGACGGCCATCGGGGTGACCAAGC...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACAGGTCGAGGCGGGTCTaGGGGAGTGGCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHRSRRV*GSGRGP
Trigger: GGGCCCCCTGCCACTCCCCCAGACCCGCCTCGACCT...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCCTTCGGGGCCCTGTaGCCCCTTCCTTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQAFGAL*PLPWAL
Trigger: CAGGGCCCAAGGAAGGGGCCACAGGGCCCCGAAGGC...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGGCCAGGCGTGGCACTaGCCACTCCGAAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRGQAWH*PLRRPA
Trigger: TGCTGGCCTTCGGAGTGGCCAGTGCCACGCCTGGCC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCAGCGGGGCCAGGCGTaGCACTGGCCACTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEQRGQA*HWPLRR
Trigger: CCTTCGGAGTGGCCAGTGCCACGCCTGGCCCCGCTG...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGAGACTCGCCAGGAGTTaGGGAAGGCAGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLRLARS*GRQWGS
Trigger: GCTGCCCCACTGCCTTCCCCAACTCCTGGCGAGTCT...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGGGCTGGAAGGCTGCTaGGCTCGGGCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEGLEGC*ARAGEG
Trigger: GCCTTCCCCAGCCCGAGCCCAGCAGCCTTCCAGCCC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGTGGAACTCCTTGGGCTaGAAGGCTGCTGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLWNSLG*KAAGLG
Trigger: CCCGAGCCCAGCAGCCTTCCAGCCCAAGGAGTTCCA...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTTCCAGACCTGGCCCTaGGCAGGGCGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWFQTWP*AGRHWR
Trigger: CCTCCAGTGCCGCCCTGCCCAGGGCCAGGTCTGGAA...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGAGCATGGCGTCCAGCTaGTCAGCCAGGGCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAESMASS*SARASN
Trigger: GTTCGACGCCCTGGCTGACCAGCTGGACGCCATGCT...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGAGCCTGACCAGCCCTTaGCCCGTCCCTAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGSLTSP*PVPRVA
Trigger: TGCCACCCTAGGGACGGGCCAAGGGCTGGTCAGGCT...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGTACAGAGCCAGGGCCTaGGCCAATGGGGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLYRARA*ANGVRL
Trigger: GAGCCTGACCCCATTGGCCCAGGCCCTGGCTCTGTA...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGCCCCTGCCCGGACATTaGGAGCAGTGGGATCGTGGA +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGPLPGH*EQWDRG
Trigger: TCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGG...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGCCGCACGTCCTGGGTaGAGATCTGCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRAARPG*RSAPQS
Trigger: GCTCTGGGGAGCAGATCTTCACCCAGGACGTGCGGC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGGTGGCCAGACCCCCGTaGGCGTGCCCCGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAEVARPP*ACPDAL
Trigger: GAGAGCATCGGGGCACGCTCACGGGGGTCTGGCCAC...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAGTGGCCAGACCCCCGTaGGCGTGCCCCGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRVARPP*ACPDAL
Trigger: GAGAGCATCGGGGCACGCTCACGGGGGTCTGGCCAC...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCGGCGTCAGGGCGCCATaGCACAGCCCCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSGVRAP*HSPLEG
Trigger: GCCCTCCAAGGGGCTGTGGCATGGCGCCCTGACGCC...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGTACTGTGCAGCCAGGTaGAGGGGGATCTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEYCAAR*RGICPS
Trigger: GGACGGACAGATCCCCCTGCACCTGGCTGCACAGTA...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGGGGGGAAGTAGCCTATaGGGTCTGTGCCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGGGSSL*GLCPSG
Trigger: GCCAGAGGGGCACAGACCGCATAGGCTACTTCCCCC...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
64% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGTGCCGGCACTGCGGATaGTGCCCACGCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQCRHCG*CPRCPH
Trigger: GTGAGGGCAGCGTGGGCAGCATCCGCAGTGCCGGCA...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGGCCCGCTGCCGGCACTaGGGATGCTGCCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMARCRH*GCCPRC
Trigger: GCAGCGTGGGCAGCATCCGCAGTGCCGGCAGCGGGC...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCGGAGAAGGCCCAGGGTaGGCCAGGAGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTGEGPG*ARRWPW
Trigger: CCAGGGCCACCTCCTGGCGCACCCTGGGCCTTCTCC...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGGGCAAAGGACTGGCTaGGAGGAGTCCCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRGQRTG*EESPEL
Trigger: CAGCTCGGGGGACTCCTCGCAGCCAGTCCTTTGCCC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGGCCCTTCCCCAGAGCTaGCCCGAGATGGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRALPQS*PEMGAS
Trigger: GGACGCCCCCATCTCGGGGCAGCTCTGGGGAAGGGC...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGCCCTTCCCCAGAGCTaGCCCGAGATGGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAALPQS*PEMGAS
Trigger: GGACGCCCCCATCTCGGGGCAGCTCTGGGGAAGGGC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGCCAGCAGTGCGGTCTaGAGTGGCTCTCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRASSAV*SGSLSR
Trigger: CCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTGCTCCTTGGTGCCAATaGTCTTCTCTGCGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGQWGQALPALRWAVGAPAPWCQ*SSLRLS
Trigger: TGAGAGCCGCAGAGAAGAGCATTGGCACCAAGGAGC...AGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGCCCTGCTCGGTCCCTaGCACTCAGGACGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEALLGP*HSGRWL
Trigger: GAGCCACCGTCCTGAGTGCCAGGGACCGAGCAGGGC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCATGCCACAGCCCCTTaGAGGGCTCCCGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQHATAP*RAPGSG
Trigger: CCCGGAACCGGGAGCCCTCCAAGGGGCTGTGGCATG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTCCCAAAGCAGCGTGGTaGAGGGCAGAGAATCCATCA +
Preference number: 4 (lower is better)
Translates to: LGQWGQALPALRWAVGAPPKAAW*RAENPS
Trigger: TGATGGATTCTCTGCCCTCCACCACGCTGCTTTGGG...AGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGCCAAGTGCAGGGGCGTaGTGTAGTTGGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLPSAGA*CSWGHT
Trigger: CGTGTGACCCCAACTACACCACGCCCCTGCACTTGG...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCGGTCTGTGCCCCTCTaGCTCTCGTGGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRRSVPL*LSWMWP
Trigger: GGGCCACATCCACGAGAGCCAGAGGGGCACAGACCG...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGACCTGCTGGGCTGTCTaGGCTGAGGCCCACCCGAGG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQTCWAV*AEAHPR
Trigger: CCTCGGGTGGGCCTCAGCCCAGACAGCCCAGCAGGT...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGGCTTGGTCACCCCGATaGCCGTCAGGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGAWSPR*PSGPQV
Trigger: CACCTGAGGACCTGACGGCCATCGGGGTGACCAAGC...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTCTCCAGCAGGTCCGTTaGGATGTAGCTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRALQQVR*DVAGQP
Trigger: TGGCTGCCCAGCTACATCCCAACGGACCTGCTGGAG...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGCTTAGTTCGCTGCCCTaGAAGGTGAGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAELSSLP*KVRSRG
Trigger: CCCACGGCTCCTCACCTTCCAGGGCAGCGAACTAAG...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTGGGAGGGGGAGTaGTTCAGGGCCACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVRWEGE*FRATPC
Trigger: GCAGGGGGTGGCCCTGAACCACTCCCCCTCCCACCT...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGAGGTGGGAGGGGGAGTaGTTCAGGGCCACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQRWEGE*FRATPC
Trigger: GCAGGGGGTGGCCCTGAACCACTCCCCCTCCCACCT...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCGATGCTCTCCTGGCTaGGAGAGCGGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRRCSPG*ESGQVG
Trigger: TCCCACCTGCCCGCTCTCCCAGCCAGGAGAGCATCG...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGAGTGGGAAGGGGCCCTGCTAGGAGGGGCACTTCAGCCTGACCAGCCCTTGCAGTGCGGTCTGCAGTaGCTCTCTCTCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: AEWEGALLGGALQPDQPLQCGLQ*LSLPAL
Trigger: AAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTG...CAAGGGCTGGTCAGGCTGAAGTGCCCCTCCTAGCAGGGCCCCTTCCCACTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGGCCAGGCGTGGCACTaGCCACTCCGAAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEGQAWH*PLRRPA
Trigger: TGCTGGCCTTCGGAGTGGCCAGTGCCACGCCTGGCC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGGGGCTGGAAGGCTGCTaGGCTCGGGCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRGLEGC*ARAGEG
Trigger: GCCTTCCCCAGCCCGAGCCCAGCAGCCTTCCAGCCC...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCTGGGCAGGGCGGCACTaGAGGCTGCATGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCWAGRH*RLHGGA
Trigger: AGCCCCGCCATGCAGCCTCCAGTGCCGCCCTGCCCA...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGTTCCAGACCTGGCCCTaGGCAGGGCGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEFQTWP*AGRHWR
Trigger: CCTCCAGTGCCGCCCTGCCCAGGGCCAGGTCTGGAA...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGAGTGCTCTCAGGCCGTaGAGGAGGCACTGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQESALRP*RRHWAG
Trigger: CCCCGCCCAGTGCCTCCTCCACGGCCTGAGAGCACT...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGTTCGGCAGGTCACAGTaGGCACTGCTGGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEFGRSQ*ALLEGS
Trigger: TGAGCCCTCCAGCAGTGCCCACTGTGACCTGCCGAA...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGGCCCGTCCCTAGGGTaGCAGGGGCCTCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEGPSLG*QGPLLC
Trigger: GCACAGAAGAGGCCCCTGCCACCCTAGGGACGGGCC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGCCCCACAAGAGCTGTaGTGCCCACAGCCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEAPQEL*CPQPRA
Trigger: AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACTGGGCCAGGGGGCTCTaGGGGGCCAGCAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHWARGL*GASRFT
Trigger: AGTGAACCTGCTGGCCCCTCAGAGCCCCCTGGCCCA...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCAGGGGCACTTCAGCCTaGCCAGCCCTTGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSRGTSA*PALGPS
Trigger: GGACGGGCCAAGGGCTGGTCAGGCTGAAGTGCCCCT...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGGCCTCCCGCAGTAGCTaGTTGATTTCCCGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWASRSS*LISRLA
Trigger: GGCCAGCCGGGAAATCAAGCAGCTACTGCGGGAGGC...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGCAGCGGCCGTCGGGATaGTGTTCTAGCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGQRPSG*CSSTVM
Trigger: CATCACGGTGCTAGAACAGCATCCCGACGGCCGCTG...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTCGGCACTGCGGATGCTaGCCACGCTGCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWARHCGC*PRCPHC
Trigger: GCAGTGAGGGCAGCGTGGGCAGCATCCGCAGTGCCG...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCAGAGCTCTGCCCGCTaGCGGCACTGCGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSQSSAR*RHCGCC
Trigger: GCAGCATCCGCAGTGCCGGCAGCGGGCAGAGCTCTG...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGAGAAGGCCCAGGGTaGGCCAGGAGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGGEGPG*ARRWPW
Trigger: CCAGGGCCACCTCCTGGCGCACCCTGGGCCTTCTCC...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGGTCTGCTCCAGTCTCTaGTGGGCCTGGCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRVCSSL*WAWPGP
Trigger: GGGCCCAGGCCAGGCCCAGCAGAGACTGGAGCAGAC...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGGCGGGGGCAGGAGCTaGCTGGGCACCACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYGGGRS*LGTTAV
Trigger: CACAGCGGTGGTGCCCAGGCAGCTCCTGCCCCCGCC...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCACCTGCTGGGCTGTCTaGGCTGAGGCCCACCCGAGG +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPTCWAV*AEAHPR
Trigger: CCTCGGGTGGGCCTCAGCCCAGACAGCCCAGCAGGT...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGCGGCGGGTGGAGTCCTaGCAGCACCTGGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRRRVES*QHLVLS
Trigger: GGAGAGGACCAGGTGCTGCCAGGACTCCACCCGCCG...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGCCAGGGACGGCGGGTaGAGTCCTGGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGARDGG*SPGSTW
Trigger: CCAGGTGCTGCCAGGACTCCACCCGCCGTCCCTGGC...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGACCCCAGAGCGGCAGTTaGCCAGAGGGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRPQSGS*PEGGGS
Trigger: TGAGCCACCGCCCTCTGGCCAACTGCCGCTCTGGGG...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTCCTGTGCCCAGGCTTaGTCACCCCGATGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRSCAQA*SPRWPS
Trigger: TGACGGCCATCGGGGTGACCAAGCCTGGGCACAGGA...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGCCACCCCCTGCCATaGCCGCCTGTAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGGHPLP*PPVALG
Trigger: GCCCAGAGCTACAGGCGGCCATGGCAGGGGGTGGCC...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGCCCCGATGCTCTCCTaGCTGGGAGAGCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPAPMLS*LGERAG
Trigger: ACCTGCCCGCTCTCCCAGCCAGGAGAGCATCGGGGC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTGGGATCTCCACCGCTaGGCTGTGGGGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRWDLHR*AVGQAV
Trigger: AACAGCCTGCCCCACAGCCCAGCGGTGGAGATCCCA...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGAGGAGTCCCCCGAGCTaGGGTTGGGGTCACACTAGG +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRRSPPS*GWGHTR
Trigger: CCTAGTGTGACCCCAACCCCAGCTCGGGGGACTCCT...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAAGTTGGGGAAGGCAGTaGGGCAGCGGGGCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRSWGRQ*GSGARR
Trigger: ACGCCTGGCCCCGCTGCCCCACTGCCTTCCCCAACT...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCTTGGTGGAGGCGCTaGGGGTGCCCTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQAWWRR*GCPLAP
Trigger: AGGAGCAAGAGGGCACCCCCAGCGCCTCCACCAAGC...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGAGCATGGCGTCCAGCTaGTCAGCCAGGGCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRSMASS*SARASN
Trigger: GTTCGACGCCCTGGCTGACCAGCTGGACGCCATGCT...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACGGCCCGTCCCTAGGGTaGCAGGGGCCTCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHGPSLG*QGPLLC
Trigger: GCACAGAAGAGGCCCCTGCCACCCTAGGGACGGGCC...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCCAGCCGCGGGCTGAGTaGGAAGGGGCCCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCQPRAE*EGALLG
Trigger: TCCTAGCAGGGCCCCTTCCCACTCAGCCCGCGGCTG...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGGGGGCAGGAGCTGCCTaGGCACCACCGCTGTGTATT +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWGAGAA*APPLCI
Trigger: AATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGCCTGGTAGTTCACGTTaGGCCTCTTTGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEPGSSR*ASLWSP
Trigger: TGGGCTCCACAAAGAGGCTCAACGTGAACTACCAGG...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGCAGCTGGGCCACCTTaGGTCGGCCAAATTCACAGG +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRAAGPP*VGQIHR
Trigger: CCTGTGAATTTGGCCGACTCAAGGTGGCCCAGCTGC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGTGGGAGGTGGTGAACTaGTTCACTATGTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEWEVVN*FTMSSA
Trigger: GGCGCTGGACATAGTGAATCAGTTCACCACCTCCCA...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCCCCTGCCCGGACATTaGGAGCAGTGGGATCGTGGA +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQPLPGH*EQWDRG
Trigger: TCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCCCACCCGCTTGCTaGCCACCTCGACAATGCCCG +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRCPPAC*PPRQCP
Trigger: CGGGCATTGTCGAGGTGGTCAGCAAGCGGGTGGGCA...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTGCCCACCCGCTTGCTaGCCACCTCGACAATGCCCG +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPCPPAC*PPRQCP
Trigger: CGGGCATTGTCGAGGTGGTCAGCAAGCGGGTGGGCA...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCTGGGCTGTCTGGGCTaGGGCCCACCCGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMLGCLG*GPPEEA
Trigger: AGCTTCCTCGGGTGGGCCTCAGCCCAGACAGCCCAG...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGAGCCGCACGTCCTGGGTaGAGATCTGCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARAARPG*RSAPQS
Trigger: GCTCTGGGGAGCAGATCTTCACCCAGGACGTGCGGC...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCCACTCGGCGATGCTaGGCTGAGCGATCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQATRRC*AERSLR
Trigger: CCTCAGAGATCGCTCAGCTCAGCATCGCCGAGTGGC...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCGGCCGGGCTAGAGGGTaGGCCCTGGGGGTACATAAA +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVGRARG*ALGVHK
Trigger: TTTATGTACCCCCAGGGCTCACCCTCTAGCCCGGCC...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCCCACCGACTAGCTGCTaGGCTTTCCAGACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVPPTSC*AFQTWP
Trigger: GGGCCAGGTCTGGAAAGCTCAGCAGCTAGTCGGTGG...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCGGTCTTGCCATACAGTaGGGCCTCGTGGAGCGCCGT +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVGLAIQ*GLVERR
Trigger: ACGGCGCTCCACGAGGCCGCACTGTATGGCAAGACC...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGCCGCTGCTCACCAGCTaGTTGTGGTACTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWPLLTS*LWYCGS
Trigger: GCTGCCACAGTACCACAAGCAGCTGGTGAGCAGCGG...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGTGAGCGTGCCCCGATaGTCTCCTGGCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAVSVPR*SPGWES
Trigger: GCTCTCCCAGCCAGGAGAGCATCGGGGCACGCTCAC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGTGAGCGTGCCCCGATaGTCTCCTGGCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPVSVPR*SPGWES
Trigger: GCTCTCCCAGCCAGGAGAGCATCGGGGCACGCTCAC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCGGGCAAAGGACTGGCTaGGAGGAGTCCCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTGQRTG*EESPEL
Trigger: CAGCTCGGGGGACTCCTCGCAGCCAGTCCTTTGCCC...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCAGGTTCCCTTCCTCTaGAAACGGCAGCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRQVPFL*KRQPFP
Trigger: GGGGAAGGGCTGCCGTTTGCAGAGGAAGGGAACCTG...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCGCCAGCAGTGCGGTCTaGAGTGGCTCTCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCASSAV*SGSLSR
Trigger: CCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGC...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTTGGGCTGGAAGGCTaGTGGGCTCGGGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSLGLEG*WARAGE
Trigger: TTCCCCAGCCCGAGCCCAGCAGCCTTCCAGCCCAAG...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTGGAGGCGCTGGGGGTaGCCTCTTGCTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTWRRWG*PLAPWC
Trigger: GCACCAAGGAGCAAGAGGGCACCCCCAGCGCCTCCA...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCTGGAGGCGCTGGGGGTaGCCTCTTGCTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAWRRWG*PLAPWC
Trigger: GCACCAAGGAGCAAGAGGGCACCCCCAGCGCCTCCA...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACCACAAGAGCTGTGGTaGCCACAGCCGCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARPQELW*PQPRAE
Trigger: CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGG...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCAGCTGGGTGGCGGGATaGAGTCCCTCCCGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAASWVAG*SPSREE
Trigger: CTCCTCTCGGGAGGGACTGCATCCCGCCACCCAGCT...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGCCGACAGCTCCAGGATaGGCTGGGACTGGGCACACC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRPTAPG*AGTGHT
Trigger: GGTGTGCCCAGTCCCAGCCCATCCTGGAGCTGTCGG...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGCTGTTCAGAAGCAGCTaGGCCACCTTGAGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGLFRSS*ATLSRP
Trigger: TGGCCGACTCAAGGTGGCCCAGCTGCTTCTGAACAG...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTTGGCTCTCGTGGATGTaGCCCTTCCAGCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWAWLSWM*PFQRPS
Trigger: CGACGGCCGCTGGAAGGGCCACATCCACGAGAGCCA...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCCCTCTGGCTCTCGTaGATGTGGCCCTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAPLWLS*MWPFQR
Trigger: CCGCTGGAAGGGCCACATCCACGAGAGCCAGAGGGG...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCCGTTGGGATGTAGCTaGGCAGCCACTCGGCGATGC +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQPLGCS*AATRRC
Trigger: GCATCGCCGAGTGGCTGCCCAGCTACATCCCAACGG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGCTCACCAGCTGCTTGTaGTACTGTGGCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGLTSCL*YCGSPS
Trigger: ACTGGGGCTGCCACAGTACCACAAGCAGCTGGTGAG...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCCGGCCACCAGCCCCATaGAGTCGTAGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCRPPAP*SRSRCS
Trigger: TGAGCAGCGGCTACGACTCCATGGGGCTGGTGGCCG...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCGGCCACCAGCCCCATaGAGTCGTAGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAARPPAP*SRSRCS
Trigger: TGAGCAGCGGCTACGACTCCATGGGGCTGGTGGCCG...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCGAAGGTGAGGAGCCGTaGGCCAGCTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCEGEEP*ASCSWA
Trigger: GGCCCAGCTACAGCTGGCCCACGGCTCCTCACCTTC...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGGAAGGTGAGGAGCCGTaGGCCAGCTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAEEGEEP*ASCSWA
Trigger: GGCCCAGCTACAGCTGGCCCACGGCTCCTCACCTTC...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCGGGCGGCTTAGGCTGTaGGACCGGCGCTTAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSGRLRL*DRRLGR
Trigger: TCGACCTAAGCGCCGGTCCCACAGCCTAAGCCGCCC...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGGGCGGCTTAGGCTGTaGGACCGGCGCTTAGGTCGA +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAGRLRL*DRRLGR
Trigger: TCGACCTAAGCGCCGGTCCCACAGCCTAAGCCGCCC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAAAGGGCACTGCGTCCTaGCCGCCGGGTAAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRKGTAS*PPGKGS
Trigger: GCTACCCTTACCCGGCGGCCAGGACGCAGTGCCCTT...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCCGCAGGGCAAAGGACTaGCTGCGAGGAGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHARRAKD*LRGVPR
Trigger: TCGGGGGACTCCTCGCAGCCAGTCCTTTGCCCTGCG...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGCAGGGCAAAGGACTaGCTGCGAGGAGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSRRAKD*LRGVPR
Trigger: TCGGGGGACTCCTCGCAGCCAGTCCTTTGCCCTGCG...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCTGGAACTCCTTGGGCTaGAAGGCTGCTGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVWNSLG*KAAGLG
Trigger: CCCGAGCCCAGCAGCCTTCCAGCCCAAGGAGTTCCA...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCCAGAATGTGCTTGGTaGAGGCGCTGGGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEPECAW*RRWGCP
Trigger: AGGGCACCCCCAGCGCCTCCACCAAGCACATTCTGG...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCAGCCTGACCAGCCCTTaGCCCGTCCCTAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPSLTSP*PVPRVA
Trigger: TGCCACCCTAGGGACGGGCCAAGGGCTGGTCAGGCT...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCCGCGGGCTGAGTaGGAAGGGGCCCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMQPRAE*EGALLG
Trigger: TCCTAGCAGGGCCCCTTCCCACTCAGCCCGCGGCTG...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGATGAGGCAGCTGGGTaGCGGGATGCAGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAADEAAG*RDAVPP
Trigger: GGGAGGGACTGCATCCCGCCACCCAGCTGCCTCATC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433559.6
CDS-3UTR TCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGTCACATCTCCATTCTTaGCGGCGAGGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAESHLHS*RRGSGP
Trigger: AGGACCTGATCCTCGCCGTCAAGAATGGAGATGTGA...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTTGCCATTGCTGTCCTTaGTGTCAACAGTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QVLRWAAPQELWCPQPRACHCCP*CQQWPE
Trigger: CTCAGGCCACTGTTGACATCAAGGACAGCAATGGCA...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGTCTTCTTGGCCTTGTTaGCCAGGCATGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAESSWPC*PGMGWT
Trigger: AGTCCAACCCATGCCTGGTCAACAAGGCCAAGAAGA...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGTGGGAGGTGGTGAACTaGTTCACTATGTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGWEVVN*FTMSSA
Trigger: GGCGCTGGACATAGTGAATCAGTTCACCACCTCCCA...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGCTGGGCTGTCTGGGCTaGGGCCCACCCGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTLGCLG*GPPEEA
Trigger: AGCTTCCTCGGGTGGGCCTCAGCCCAGACAGCCCAG...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGGAGCTGAGCGATCTCTaGGGCGATCTTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGELSDL*GDLLPV
Trigger: CACAGGAAGAAGATCGCCTCAGAGATCGCTCAGCTC...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCACTCGGCGATGCTaGGCTGAGCGATCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWAATRRC*AERSLR
Trigger: CCTCAGAGATCGCTCAGCTCAGCATCGCCGAGTGGC...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGCTTCACCCCCAGCATaGGCTTCTTCTGATGCCCGA +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRASPPA*ASSDAR
Trigger: TCGGGCATCAGAAGAAGCTCATGCTGGGGGTGAAGC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCGGCCGGGCTAGAGGGTaGGCCCTGGGGGTACATAAA +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAGRARG*ALGVHK
Trigger: TTTATGTACCCCCAGGGCTCACCCTCTAGCCCGGCC...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTGGGAGGGGCTTTGCTaGGATGCAGCGGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPWEGLC*DAAEVP
Trigger: AGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCA...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCTGGGAGGGGCTTTGCTaGGATGCAGCGGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCWEGLC*DAAEVP
Trigger: AGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCA...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGCCCCTACTTCCTCCCTaGGGAGAGAGCTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWPLLPP*GESSYQ
Trigger: CTGGTAAGAGCTCTCTCCTCAGGGAGGAAGTAGGGG...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCCCAGGAGCTCTCTCTaGGCCCCAGTGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQPRSSL*APVETM
Trigger: CATTGTCTCCACTGGGGCTCAGAGAGAGCTCCTGGG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433559.6
CDS-3UTR GCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTCAGGCAGCAGCGGTaGACTGGTCTCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHLRQQR*TGLRAL
Trigger: GAGAGCCCTGAGACCAGTGCACCGCTGCTGCCTGAG...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGCTGTGGAACACCAGTaGCCACCCAGAGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEAVEHQ*PPREQP
Trigger: TGGCTGCTCTCTGGGTGGGCACTGGTGTTCCACAGC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCGCCTCCCGCAGTAGCTaGTTGATTTCCCGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSASRSS*LISRLA
Trigger: GGCCAGCCGGGAAATCAAGCAGCTACTGCGGGAGGC...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCCTATGCGGTCTGTaGCCCTCTGGCTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVSLCGL*PSGSRG
Trigger: TCCACGAGAGCCAGAGGGGCACAGACCGCATAGGCT...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGAGGGGGAAGTAGCCTATaGGGTCTGTGCCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARGGSSL*GLCPSG
Trigger: GCCAGAGGGGCACAGACCGCATAGGCTACTTCCCCC...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAACTGCCTAGGGTGCTaGCCACTGGCCCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCNCLGC*PLALRP
Trigger: AGGCCGAAGGGCCAGTGGGCAGCACCCTAGGCAGTT...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCAGGTTCCCTTCCTCTaGAAACGGCAGCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEQVPFL*KRQPFP
Trigger: GGGGAAGGGCTGCCGTTTGCAGAGGAAGGGAACCTG...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGGACGAGCTGGTCTaGTCCAGTCTCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRRDELV*SSLCWA
Trigger: GGCCCAGCAGAGACTGGAGCAGACCAGCTCGTCCCT...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCGGCTCTCAGTGCAGCTaGCAGGGACGAGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCGSQCS*QGRAGL
Trigger: CAGACCAGCTCGTCCCTGGCAGCTGCACTGAGAGCC...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCTGCGGCTCTCAGTaGAGCTGCCAGGGACGAGCT +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSLCGSQ*SCQGRA
Trigger: AGCTCGTCCCTGGCAGCTGCACTGAGAGCCGCAGAG...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCAGGGGCCTCTTCTGTaGTGGGGCAAAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQQGPLL*WGKGSG
Trigger: TCCACTGCCTTTGCCCCAGCACAGAAGAGGCCCCTG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCAGGGGCCTCTTCTGTaGTGGGGCAAAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEQGPLL*WGKGSG
Trigger: TCCACTGCCTTTGCCCCAGCACAGAAGAGGCCCCTG...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTCAGCCAGCATTCCCTTaGGCCTCAGGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWAQPAFP*ASGSSG
Trigger: ACCGCTGCTGCCTGAGGCCCAAGGGAATGCTGGCTG...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGTTCCCGGCTTGGCTGTaGAACACCAGTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQFPAWL*NTSAHP
Trigger: TGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAA...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGGCAACGGGTCCAAGCTaGGGCGTCAGGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTATGPS*GVRAPC
Trigger: GCATGGCGCCCTGACGCCCCAGCTTGGACCCGTTGC...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGCTTGTTGACCAGGCATaGGTTGGACTGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAELVDQA*VGLMLE
Trigger: CTCCAGCATCAGTCCAACCCATGCCTGGTCAACAAG...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTACAGTGCGGCCTCGTaGAGCGCCGTACCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAEYSAAS*SAVPVL
Trigger: CAAGACGGGTACGGCGCTCCACGAGGCCGCACTGTA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCTACAGTGCGGCCTCGTaGAGCGCCGTACCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSYSAAS*SAVPVL
Trigger: CAAGACGGGTACGGCGCTCCACGAGGCCGCACTGTA...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACAGTCCTGGCAGCACCTaGTCCTCTCCAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHSPGST*SSPAEG
Trigger: GCCCTCTGCTGGAGAGGACCAGGTGCTGCCAGGACT...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCTTGGCCAGAGGGCGGTaGCTCAGGTTGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHALARGR*LRLSAR
Trigger: CCTGGCAGACAACCTGAGCCACCGCCCTCTGGCCAA...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCTTGGCCAGAGGGCGGTaGCTCAGGTTGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCLARGR*LRLSAR
Trigger: CCTGGCAGACAACCTGAGCCACCGCCCTCTGGCCAA...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTCCTGTGCCCAGGCTTaGTCACCCCGATGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAESCAQA*SPRWPS
Trigger: TGACGGCCATCGGGGTGACCAAGCCTGGGCACAGGA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCTGCTTGTGGTACTGTaGCAGCCCCAGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRLLVVL*QPQCTQ
Trigger: CTGTGTGCACTGGGGCTGCCACAGTACCACAAGCAG...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGCCCCGATGCTCTCCTaGCTGGGAGAGCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYAPMLS*LGERAG
Trigger: ACCTGCCCGCTCTCCCAGCCAGGAGAGCATCGGGGC...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCGGCTGTTCCTGTGAGTaGCCAGACCCCCGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCGCSCE*PDPRER
Trigger: ACGCTCACGGGGGTCTGGCCACTCACAGGAACAGCC...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCTGGGATCTCCACCGCTaGGCTGTGGGGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCWDLHR*AVGQAV
Trigger: AACAGCCTGCCCCACAGCCCAGCGGTGGAGATCCCA...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGAAGGGCACTGCGTCCTaGCCGCCGGGTAAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMKGTAS*PPGKGS
Trigger: GCTACCCTTACCCGGCGGCCAGGACGCAGTGCCCTT...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCCCCGAGCTGGGGTTaGGGTCACACTAGGACTGGT +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAPPSWG*GHTRTG
Trigger: ACCAGTCCTAGTGTGACCCCAACCCCAGCTCGGGGG...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCAGGAGTCCCCCGAGCTaGGGTTGGGGTCACACTAGG +
Preference number: 4 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTRSPPS*GWGHTR
Trigger: CCTAGTGTGACCCCAACCCCAGCTCGGGGGACTCCT...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGGGGTTGGAACTCCTTaGGCTGGAAGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPGVGTP*AGRLLG
Trigger: GCCCAGCAGCCTTCCAGCCCAAGGAGTTCCAACCCC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCCAGAAAATGCCAGCTaGGTGCAGGCCACCGACACA +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRPENAS*VQATDT
Trigger: TGTGTCGGTGGCCTGCACCCAGCTGGCATTTTCTGG...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGTGCCCTCTTGCTCCTTaGTGCCAATGCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLRWAAPQELWCPQPRAECPLAP*CQCSSL
Trigger: CAGAGAAGAGCATTGGCACCAAGGAGCAAGAGGGCA...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCCCAGAATGTGCTTGGTaGAGGCGCTGGGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPPECAW*RRWGCP
Trigger: AGGGCACCCCCAGCGCCTCCACCAAGCACATTCTGG...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACCCAAAGGTGCTCCGTaGACTGCCACCACACGAAGG +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARPKGAP*TATTRR
Trigger: CCTTCGTGTGGTGGCAGTTCACGGAGCACCTTTGGG...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGTGCCATTGCTGTCCTTaGTGTCAACAGTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGCHCCP*CQQWPE
Trigger: CTCAGGCCACTGTTGACATCAAGGACAGCAATGGCA...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCGCAGCTGGGCCACCTTaGGTCGGCCAAATTCACAGG +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCAAGPP*VGQIHR
Trigger: CCTGTGAATTTGGCCGACTCAAGGTGGCCCAGCTGC...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCTCGGCGATGCTGAGCTaGGCGATCTCTGAGGCGATC +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHASAMLS*AISEAI
Trigger: GATCGCCTCAGAGATCGCTCAGCTCAGCATCGCCGA...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCTTCACCCCCAGCATaGGCTTCTTCTGATGCCCGA +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQASPPA*ASSDAR
Trigger: TCGGGCATCAGAAGAAGCTCATGCTGGGGGTGAAGC...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCCACCGACTAGCTGCTaGGCTTTCCAGACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMPPTSC*AFQTWP
Trigger: GGGCCAGGTCTGGAAAGCTCAGCAGCTAGTCGGTGG...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGTACTGTGCAGCCAGGTaGAGGGGGATCTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRYCAAR*RGICPS
Trigger: GGACGGACAGATCCCCCTGCACCTGGCTGCACAGTA...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGGGTCTTGCCATACAGTaGGGCCTCGTGGAGCGCCGT +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMGLAIQ*GLVERR
Trigger: ACGGCGCTCCACGAGGCCGCACTGTATGGCAAGACC...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAGCACCACCTCGGTCTTaGCATACAGTGCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRAPPRS*HTVRPR
Trigger: ACGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGC...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGCACCACCTCGGTCTTaGCATACAGTGCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPAPPRS*HTVRPR
Trigger: ACGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACAGCGGCCGTCGGGATaGTGTTCTAGCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARQRPSG*CSSTVM
Trigger: CATCACGGTGCTAGAACAGCATCCCGACGGCCGCTG...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGACTATTCCTGTCACCTaGTGGGCTGTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWTIPVT*WAVWAE
Trigger: CTCAGCCCAGACAGCCCAGCAGGTGACAGGAATAGT...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp ATGGTGGGTGGCAAGAGGCATTCCCTTGGCACAACTTGGGACATGGGCTGGGGGTCCTGGGTGAAGATCTaGTCCCCAGAGCGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: MVGGKRHSLGTTWDMGWGSWVKI*SPERQL
Trigger: CAACTGCCGCTCTGGGGAGCAGATCTTCACCCAGGA...CCCCCAGCCCATGTCCCAAGTTGTGCCAAGGGAATGCCTCTTGCCACCCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGCCGCTGCTCACCAGCTaGTTGTGGTACTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRPLLTS*LWYCGS
Trigger: GCTGCCACAGTACCACAAGCAGCTGGTGAGCAGCGG...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCTTGACCCCAATCTCCTaGAGCTCCTCCCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVLTPIS*SSSQVR
Trigger: CCTCACCTGGGAGGAGCTGCAGGAGATTGGGGTCAA...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCCATAACTGCCTAGGGTaGTGCCCACTGGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAHNCLG*CPLALR
Trigger: CCGAAGGGCCAGTGGGCAGCACCCTAGGCAGTTATG...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCATAACTGCCTAGGGTaGTGCCCACTGGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSHNCLG*CPLALR
Trigger: CCGAAGGGCCAGTGGGCAGCACCCTAGGCAGTTATG...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCTCCGAAGGCCAGCAGTaGGGTCTGCAGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCSEGQQ*GLQWLS
Trigger: AGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGGA...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAAGGGACGAGCTGGTCTaGTCCAGTCTCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGRDELV*SSLCWA
Trigger: GGCCCAGCAGAGACTGGAGCAGACCAGCTCGTCCCT...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGCCAATGCTCTTCTCTaGGGCTCTCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEANALL*GSQCSC
Trigger: GCAGCTGCACTGAGAGCCGCAGAGAAGAGCATTGGC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGCTCCTTGGTGCCAATaGTCTTCTCTGCGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRAPWCQ*SSLRLS
Trigger: TGAGAGCCGCAGAGAAGAGCATTGGCACCAAGGAGC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGCCTCTTGCTCCTTGGTaGCAATGCTCTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RRSLASQVLRWAAPQELWPLAPW*QCSSLR
Trigger: CCGCAGAGAAGAGCATTGGCACCAAGGAGCAAGAGG...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGGGGGCTTTGCTGAGATaGAGCGGAGGTCCCTCGCTA +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRGALLR*SGGPSL
Trigger: TAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCC...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCAGGATGGGCTGGGACTaGGCACACCAATCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHARMGWD*AHQSSR
Trigger: CCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCT...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTGGGGTGAAGGCTACATaGAAATCTGGATGGATATCA +
Preference number: 4 (lower is better)
Translates to: LGQWGQALPALRWAVGAPGVKAT*KSGWIS
Trigger: TGATATCCATCCAGATTTCCATGTAGCCTTCACCCC...AGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCAGGTGTCCCAGGCAGTaGGCTCCTCGTCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAARCPRQ*APRQVL
Trigger: CAGTACCTGACGAGGAGCCCACTGCCTGGGACACCT...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGGGGGCGTGGTGTAGTTaGGGTCACACGGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAEGAWCS*GHTGLW
Trigger: CCAAAGACCCGTGTGACCCCAACTACACCACGCCCC...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGGGGCGTGGTGTAGTTaGGGTCACACGGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAGAWCS*GHTGLW
Trigger: CCAAAGACCCGTGTGACCCCAACTACACCACGCCCC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCCCAAGTGCAGGGGCGTaGTGTAGTTGGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPPSAGA*CSWGHT
Trigger: CGTGTGACCCCAACTACACCACGCCCCTGCACTTGG...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGGAGGCCAGGGCCATaGCCATTAGTGCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCRRPGP*PLVPSE
Trigger: CTCTGAGGGCACTAATGGCCATGGCCCTGGCCTCCT...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTAGGAGGCCAGGGCCATaGCCATTAGTGCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWARRPGP*PLVPSE
Trigger: CTCTGAGGGCACTAATGGCCATGGCCCTGGCCTCCT...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGGCAGAGGGCAGTGGCTaGGCGTTCTCAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRAEGSG*AFSIRR
Trigger: CCTCCTGATTGAGAACGCCCAGCCACTGCCCTCTGC...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTTCTGGCCGCACGTCCTaGGTGAAGATCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWASGRTS*VKICSP
Trigger: TGGGGAGCAGATCTTCACCCAGGACGTGCGGCCAGA...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTCTGGCCGCACGTCCTaGGTGAAGATCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAESGRTS*VKICSP
Trigger: TGGGGAGCAGATCTTCACCCAGGACGTGCGGCCAGA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGCTCCAGCAGGTCCGTTaGGATGTAGCTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAELQQVR*DVAGQP
Trigger: TGGCTGCCCAGCTACATCCCAACGGACCTGCTGGAG...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGATCTCCAGTCCCTCGATaGCCATCAGCTCCGGACCCT +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARSPVPR*PSAPDP
Trigger: AGGGTCCGGAGCTGATGGCCATCGAGGGACTGGAGA...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCTCTCCAGTCCCTCGATaGCCATCAGCTCCGGACCCT +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAASPVPR*PSAPDP
Trigger: AGGGTCCGGAGCTGATGGCCATCGAGGGACTGGAGA...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTGGGCCAGCTGTAGCTaGGCCTTCTCCGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPWASCS*AFSVLQ
Trigger: CTGGAGAACGGAGAAGGCCCAGCTACAGCTGGCCCA...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCCATCCAGAATGTGCTTaGTGGAGGCGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAHPECA*WRRWGC
Trigger: GCACCCCCAGCGCCTCCACCAAGCACATTCTGGATG...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCCATCCAGAATGTGCTTaGTGGAGGCGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPHPECA*WRRWGC
Trigger: GCACCCCCAGCGCCTCCACCAAGCACATTCTGGATG...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCTTCGGCAGGTCACAGTaGGCACTGCTGGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAFGRSQ*ALLEGS
Trigger: TGAGCCCTCCAGCAGTGCCCACTGTGACCTGCCGAA...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCGGGCAGGATGGTGGGTaGCAAGAGGCATTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAGQDGG*QEAFPW
Trigger: CCAAGGGAATGCCTCTTGCCACCCACCATCCTGCCC...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGTCGCTTAGCCAGTTATaGATGGCCTGCGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQESLSQL*MACASF
Trigger: GAAGGACGCGCAGGCCATTCATAACTGGCTAAGCGA...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGAGCTGAGCGATCTCTaGGGCGATCTTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQELSDL*GDLLPV
Trigger: CACAGGAAGAAGATCGCCTCAGAGATCGCTCAGCTC...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGTCGGCGATGCTGAGCTaGGCGATCTCTGAGGCGATC +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMSAMLS*AISEAI
Trigger: GATCGCCTCAGAGATCGCTCAGCTCAGCATCGCCGA...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACGATGCCCGAGCTTGTTaGCCCCAATCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHDARAC*PQSPAA
Trigger: AGCTGCAGGAGATTGGGGTCAACAAGCTCGGGCATC...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGCTTCGGGCGCTGTTTaGTGGTCAGGTTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPASGAV*WSGSLP
Trigger: AGGAAGGGAACCTGACCATCAAACAGCGCCCGAAGC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCCAGCTCTCAGGAGCTaGCTGATGACTTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEPALRS*LMTSLW
Trigger: CCACAGAGAAGTCATCAGGCAGCTCCTGAGAGCTGG...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGAGCCTATGCGGTCTGTaGCCCTCTGGCTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMSLCGL*PSGSRG
Trigger: TCCACGAGAGCCAGAGGGGCACAGACCGCATAGGCT...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCCACGCTGCCCTCACTaGCCACACTATTCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSPRCPH*PHYSCH
Trigger: GTGACAGGAATAGTGTGGGCAGTGAGGGCAGCGTGG...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCTCCTGGGTGAAGATCTaGTCCCCAGAGCGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAASWVKI*SPERQL
Trigger: CAACTGCCGCTCTGGGGAGCAGATCTTCACCCAGGA...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTGGAGTCGTAGCCGCTaGTCACCAGCTGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPWSRSR*SPAACG
Trigger: ACCACAAGCAGCTGGTGAGCAGCGGCTACGACTCCA...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTGGAGTCGTAGCCGCTaGTCACCAGCTGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAEWSRSR*SPAACG
Trigger: ACCACAAGCAGCTGGTGAGCAGCGGCTACGACTCCA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGATCCGAAGGCCAGCAGTaGGGTCTGCAGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGSEGQQ*GLQWLS
Trigger: AGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGGA...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCAAAATGCCAGCTGGGTaGAGGCCACCGACACAGGCT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPKMPAG*RPPTQA
Trigger: AGCCTGTGTCGGTGGCCTGCACCCAGCTGGCATTTT...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACTTAGGGCCAGAAAATaGCAGCTGGGTGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARLRARK*QLGAGH
Trigger: GTGGCCTGCACCCAGCTGGCATTTTCTGGCCCTAAG...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGACTTAGGGCCAGAAAATaGCAGCTGGGTGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRLRARK*QLGAGH
Trigger: GTGGCCTGCACCCAGCTGGCATTTTCTGGCCCTAAG...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACGCCAATGCTCTTCTCTaGGGCTCTCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHANALL*GSQCSC
Trigger: GCAGCTGCACTGAGAGCCGCAGAGAAGAGCATTGGC...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCCCTCTTGCTCCTTGGTaGCAATGCTCTTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: DQTLGGALLRCSGGPSLVPLAPW*QCSSLR
Trigger: CCGCAGAGAAGAGCATTGGCACCAAGGAGCAAGAGG...GACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGGTTCTAAGGTGGGCTaGCCCACAAGAGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAGSKVG*PTRAVV
Trigger: CACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCAGCTCCAGGATGGGCTaGGACTGGGCACACCAATCT +
Preference number: 4 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTSSRMG*DWAHQS
Trigger: AGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCT...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCCCAAAGCAGCGTGGTaGAGGGCAGAGAATCCATCA +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQPKAAW*RAENPS
Trigger: TGATGGATTCTCTGCCCTCCACCACGCTGCTTTGGG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCACACGGGTCTTTaGCCTCACCCTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGGHTGL*PHPPAV
Trigger: CACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACC...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTACCCGTCTTGGTCTaGCGGTTGATCTCGATCCCA +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQVPVLV*RLISIP
Trigger: TGGGATCGAGATCAACCGCCAGACCAAGACGGGTAC...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGTCCAGCAGAGGGCAGTaGCTGGGCGTTCTCAATCAG +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRSSRGQ*LGVLNQ
Trigger: CTGATTGAGAACGCCCAGCCACTGCCCTCTGCTGGA...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTAGCCAGTTATGAATaGCCTGCGCGTCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRLASYE*PARPSP
Trigger: AGGGGAAGGACGCGCAGGCCATTCATAACTGGCTAA...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGTGGGCCAGCTGTAGCTaGGCCTTCTCCGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMWASCS*AFSVLQ
Trigger: CTGGAGAACGGAGAAGGCCCAGCTACAGCTGGCCCA...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACAGACTCGCCAGGAGTTaGGGAAGGCAGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYRLARS*GRQWGS
Trigger: GCTGCCCCACTGCCTTCCCCAACTCCTGGCGAGTCT...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCGGGAAGGCTAGAAGCTaGAGGAGACTCGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTGKARS*RRLARS
Trigger: ACTCCTGGCGAGTCTCCTCCAGCTTCTAGCCTTCCC...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGGGAAGGCTAGAAGCTaGAGGAGACTCGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPGKARS*RRLARS
Trigger: ACTCCTGGCGAGTCTCCTCCAGCTTCTAGCCTTCCC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCCCAGAAAATGCCAGCTaGGTGCAGGCCACCGACACA +
Preference number: 4 (lower is better)
Translates to: GQELPGHHRCVFTCPLYTPENAS*VQATDT
Trigger: TGTGTCGGTGGCCTGCACCCAGCTGGCATTTTCTGG...GGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCTGCCAGGGACGAGCTaGTCTGCTCCAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMLPGTS*SAPVSA
Trigger: AGCAGAGACTGGAGCAGACCAGCTCGTCCCTGGCAG...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGACTGCCAGGGACGAGCTaGTCTGCTCCAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGLPGTS*SAPVSA
Trigger: AGCAGAGACTGGAGCAGACCAGCTCGTCCCTGGCAG...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGACTGGGGCAAAGGCAGTaGACTTCGGCAGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRLGQRQ*TSAGHS
Trigger: ACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAG...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGAGTCAGGTTCTAAGGTaGGCTGCCCCACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQSQVLR*AAPQEL
Trigger: CAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACT...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCTCTGAGCCCCAGTaGAGACAATGCGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSLSEPQ*RQCGQQ
Trigger: CTGCTGACCGCATTGTCTCCACTGGGGCTCAGAGAG...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433559.6
CDS-3UTR TCA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACTCCTCGTCAGGTACTaGGGGATACTCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARLLVRY*GILPKV
Trigger: CACCTTTGGGAGTATCCCTCAGTACCTGACGAGGAG...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGCCTGGTAGTTCACGTTaGGCCTCTTTGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRPGSSR*ASLWSP
Trigger: TGGGCTCCACAAAGAGGCTCAACGTGAACTACCAGG...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCATGTCAACAGTGGCCTaGGCCTCTAGCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAMSTVA*ASSSKA
Trigger: AGCCTTGCTGCTAGAGGCTCAGGCCACTGTTGACAT...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCATGTCAACAGTGGCCTaGGCCTCTAGCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCMSTVA*ASSSKA
Trigger: AGCCTTGCTGCTAGAGGCTCAGGCCACTGTTGACAT...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTCGCTTAGCCAGTTATaGATGGCCTGCGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAESLSQL*MACASF
Trigger: GAAGGACGCGCAGGCCATTCATAACTGGCTAAGCGA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGGATGCCCGAGCTTGTTaGCCCCAATCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMDARAC*PQSPAA
Trigger: AGCTGCAGGAGATTGGGGTCAACAAGCTCGGGCATC...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGCGTCGAACATGGTGCTaGTGTCATCCAGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRRRTWC*CHPECA
Trigger: AGCACATTCTGGATGACATCAGCACCATGTTCGACG...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAGGATACTCCCAAAGGTaGTCCGTGAACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRGYSQR*SVNCHH
Trigger: GTGGTGGCAGTTCACGGAGCACCTTTGGGAGTATCC...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCGTGATGACATCCCCTaGCCGGACATTGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAARDDIP*PDIESS
Trigger: ACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACG...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAACTATTCCTGTCACCTaGTGGGCTGTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRTIPVT*WAVWAE
Trigger: CTCAGCCCAGACAGCCCAGCAGGTGACAGGAATAGT...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGACCACGCTGCCCTCACTaGCCACACTATTCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGPRCPH*PHYSCH
Trigger: GTGACAGGAATAGTGTGGGCAGTGAGGGCAGCGTGG...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACATGTCATCCAGAATGTaGTTGGTGGAGGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHMSSRM*LVEALG
Trigger: CCCCAGCGCCTCCACCAAGCACATTCTGGATGACAT...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCATGTCATCCAGAATGTaGTTGGTGGAGGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPMSSRM*LVEALG
Trigger: CCCCAGCGCCTCCACCAAGCACATTCTGGATGACAT...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGGGGCTTTGCTGAGATaGAGCGGAGGTCCCTCGCTA +
Preference number: 4 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYGALLR*SGGPSL
Trigger: TAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCC...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAGGAGCAGGGCTGTCCTaGTCAATCGATCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRGAGLS*SIDQTL
Trigger: CAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGACCAATCTTCCCGGCTTaGCTGTGGAACACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGPIFPA*LWNTSA
Trigger: GGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGG...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGGGTCACACGGGTCTTTaGCCTCACCCTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTGHTGL*PHPPAV
Trigger: CACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACC...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGTACCCGTCTTGGTCTaGCGGTTGATCTCGATCCCA +
Preference number: 4 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAVPVLV*RLISIP
Trigger: TGGGATCGAGATCAACCGCCAGACCAAGACGGGTAC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGACTCACCAGCTGCTTGTaGTACTGTGGCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGLTSCL*YCGSPS
Trigger: ACTGGGGCTGCCACAGTACCACAAGCAGCTGGTGAG...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGCAGTGCGGTCTGCAGTaGCTCTCTCTCCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTQCGLQ*LSLPAL
Trigger: AAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTG...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGACTGGGGCAAAGGCAGTaGACTTCGGCAGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGLGQRQ*TSAGHS
Trigger: ACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAG...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGTCAGGTTCTAAGGTaGGCTGCCCCACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRSQVLR*AAPQEL
Trigger: CAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACT...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACACTTGGGACATGGGCTaGGGGGTACAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHTWDMG*GVQRKH
Trigger: GTGCTTTCTCTGTACCCCCCAGCCCATGTCCCAAGT...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAAGGCATGGGTTGGACTaGTGCTGGAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRRHGLD*CWRSIS
Trigger: AGAAATGCTCCTCCAGCATCAGTCCAACCCATGCCT...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGGCATGGGTTGGACTaGTGCTGGAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCRHGLD*CWRSIS
Trigger: AGAAATGCTCCTCCAGCATCAGTCCAACCCATGCCT...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTTCTTCTTGGCCTTGTTaGCCAGGCATGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: GFAEMQRRSLASQVLRWASSWPC*PGMGWT
Trigger: AGTCCAACCCATGCCTGGTCAACAAGGCCAAGAAGA...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGTGGCCTGGGAGGTGGTaGACTGATTCACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRWPGRW*TDSLCP
Trigger: TGGACATAGTGAATCAGTTCACCACCTCCCAGGCCA...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTGGCCTGGGAGGTGGTaGACTGATTCACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAEWPGRW*TDSLCP
Trigger: TGGACATAGTGAATCAGTTCACCACCTCCCAGGCCA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGGGTTCCAGAAATCCTTaGGCGCTCGGACCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMGSRNP*ALGPSG
Trigger: TCCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACC...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTTCCAGAAATCCTTaGGCGCTCGGACCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGGSRNP*ALGPSG
Trigger: TCCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACC...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGGCTTCGGGCGCTGTTTaGTGGTCAGGTTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTASGAV*WSGSLP
Trigger: AGGAAGGGAACCTGACCATCAAACAGCGCCCGAAGC...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCGTCGAACATGGTGCTaGTGTCATCCAGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQRRTWC*CHPECA
Trigger: AGCACATTCTGGATGACATCAGCACCATGTTCGACG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGAGCAGGGCTGTCCTaGTCAATCGATCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGGAGLS*SIDQTL
Trigger: CAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAACCCATACTGGCTCCTaGGCTGAGCTCTACACTCAG +
Preference number: 4 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGTHTGS*AELYTQ
Trigger: CTGAGTGTAGAGCTCAGCCCAGGAGCCAGTATGGGT...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCTGATGACTTCTCTGTaGCCATTCTTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQLMTSL*PFLAAK
Trigger: CTTGGCTGCCAAGAATGGCCACAGAGAAGTCATCAG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACTCCAGCAGAGGGCAGTaGCTGGGCGTTCTCAATCAG +
Preference number: 4 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYSSRGQ*LGVLNQ
Trigger: CTGATTGAGAACGCCCAGCCACTGCCCTCTGCTGGA...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTGCCCTCTTGCTCCTTaGTGCCAATGCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPCPLAP*CQCSSL
Trigger: CAGAGAAGAGCATTGGCACCAAGGAGCAAGAGGGCA...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGCCTCTTCCAACAGCCTaGACAGTTTGGGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRPLPTA*TVWDEA
Trigger: TGCCTCATCCCAAACTGTCCAGGCTGTTGGAAGAGG...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433559.6
CDS-3UTR TCA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGTCCTTGGCCAGGAAGTaGAGAACAAAGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMSLARK*RTKLRG
Trigger: CCCCCTAAGCTTTGTTCTTCACTTCCTGGCCAAGGA...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACAGGTGCTCCGTGAACTaGCACCACACGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYRCSVN*HHTKES
Trigger: GCTTTCCTTCGTGTGGTGGCAGTTCACGGAGCACCT...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAATAATGTCCATACTGTaGAGCCAGGTGCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRIMSIL*SQVQGD
Trigger: ATCCCCCTGCACCTGGCTGCACAGTATGGACATTAT...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp GCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCATAATGTCCATACTGTaGAGCCAGGTGCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: AGLSCSIDQTLGGALLRCIMSIL*SQVQGD
Trigger: ATCCCCCTGCACCTGGCTGCACAGTATGGACATTAT...GCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR GCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGCGTGATGACATCCCCTaGCCGGACATTGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTRDDIP*PDIESS
Trigger: ACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACG...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCATGGATATCAGCTTGTaGCTTCCGACAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAMDISL*LPTAPG
Trigger: TCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCAT...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGATGTCCAGCGCCGTCTaGTTATACGTATTCCGGATG +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRMSSAV*LYVFRM
Trigger: CATCCGGAATACGTATAACCAGACGGCGCTGGACAT...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR TCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGTCCTTGGCCAGGAAGTaGAGAACAAAGCTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTSLARK*RTKLRG
Trigger: CCCCCTAAGCTTTGTTCTTCACTTCCTGGCCAAGGA...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCCCGCTTAACAGTGTCTaGTTCCGTGAGGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAPLNSV*FREVEI
Trigger: GATTTCAACCTCACGGAATCAGACACTGTTAAGCGG...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR TCA 90 bp GCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGCCGCTTAACAGTGTCTaGTTCCGTGAGGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: AVLLNRSNPGRGFAEMQRPLNSV*FREVEI
Trigger: GATTTCAACCTCACGGAATCAGACACTGTTAAGCGG...CCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CCA 90 bp CAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACCTTGTTGACCAGGCATaGGTTGGACTGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QELPGHHRCVFTCPLYTYLVDQA*VGLMLE
Trigger: CTCCAGCATCAGTCCAACCCATGCCTGGTCAACAAG...GTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp AGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACCTACGTTAGCCAGTTATGAATaGCCTGCGCGTCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RSCLGTTAVYLHVLCTPTLASYE*PARPSP
Trigger: AGGGGAAGGACGCGCAGGCCATTCATAACTGGCTAA...CGTAGGTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp ATGGTGGGTGGCAAGAGGCATTCCCTTGGCACAACTTGGGACATGGGCTGGGGGACATGGAAATCTGGATaGATATCAGCTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MVGGKRHSLGTTWDMGWGTWKSG*ISACGF
Trigger: GAAGCCACAAGCTGATATCCATCCAGATTTCCATGT...CCCCCAGCCCATGTCCCAAGTTGTGCCAAGGGAATGCCTCTTGCCACCCACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGGCGTCAGGGCGCCATaGCACAGCCCCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIGVRAP*HSPLEG
Trigger: GCCCTCCAAGGGGCTGTGGCATGGCGCCCTGACGCC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACATGCCACAGCCCCTTaGAGGGCTCCCGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALHATAP*RAPGSG
Trigger: CCCGGAACCGGGAGCCCTCCAAGGGGCTGTGGCATG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGCAACGGGTCCAAGCTaGGGCGTCAGGGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIATGPS*GVRAPC
Trigger: GCATGGCGCCCTGACGCCCCAGCTTGGACCCGTTGC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACTTCATTGGTGTTAGTTaGGGGAAGAGGTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHFIGVS*GKRLMV
Trigger: AACCATTAACCTCTTCCCCCAACTAACACCAATGAA...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGCAGCAGCGGTGCACTaGTCTCAGGGCTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIAAAVH*SQGSLP
Trigger: CGGGAGAGAGCCCTGAGACCAGTGCACCGCTGCTGC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACCGACAGCTCCAGGATaGGCTGGGACTGGGCACACC +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALPTAPG*AGTGHT
Trigger: GGTGTGCCCAGTCCCAGCCCATCCTGGAGCTGTCGG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACCCCTGCCCGGACATTaGGAGCAGTGGGATCGTGGA +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALPLPGH*EQWDRG
Trigger: TCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCTCAGGCAGCAGCGGTaGACTGGTCTCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRILRQQR*TGLRAL
Trigger: GAGAGCCCTGAGACCAGTGCACCGCTGCTGCCTGAG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGGTCTTGCCATACAGTaGGGCCTCGTGGAGCGCCGT +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIGLAIQ*GLVERR
Trigger: ACGGCGCTCCACGAGGCCGCACTGTATGGCAAGACC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAGCCTCCCGCAGTAGCTaGTTGATTTCCCGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALASRSS*LISRLA
Trigger: GGCCAGCCGGGAAATCAAGCAGCTACTGCGGGAGGC...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCAGCCAGCATTCCCTTaGGCCTCAGGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIQPAFP*ASGSSG
Trigger: ACCGCTGCTGCCTGAGGCCCAAGGGAATGCTGGCTG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTTACAGTGCGGCCTCGTaGAGCGCCGTACCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIYSAAS*SAVPVL
Trigger: CAAGACGGGTACGGCGCTCCACGAGGCCGCACTGTA...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCCCAAAGGTGCTCCGTaGACTGCCACCACACGAAGG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIPKGAP*TATTRR
Trigger: CCTTCGTGTGGTGGCAGTTCACGGAGCACCTTTGGG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAGCAGCTGGGCCACCTTaGGTCGGCCAAATTCACAGG +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALAAGPP*VGQIHR
Trigger: CCTGTGAATTTGGCCGACTCAAGGTGGCCCAGCTGC...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGCTGTGGAACACCAGTaGCCACCCAGAGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIAVEHQ*PPREQP
Trigger: TGGCTGCTCTCTGGGTGGGCACTGGTGTTCCACAGC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTTACTGTGCAGCCAGGTaGAGGGGGATCTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIYCAAR*RGICPS
Trigger: GGACGGACAGATCCCCCTGCACCTGGCTGCACAGTA...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAGCACCACCTCGGTCTTaGCATACAGTGCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALAPPRS*HTVRPR
Trigger: ACGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGC...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTTTCCCGGCTTGGCTGTaGAACACCAGTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIFPAWL*NTSAHP
Trigger: TGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAA...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTAGGATGGGCTGGGACTaGGCACACCAATCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIRMGWD*AHQSSR
Trigger: CCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTAGGTGTCCCAGGCAGTaGGCTCCTCGTCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIRCPRQ*APRQVL
Trigger: CAGTACCTGACGAGGAGCCCACTGCCTGGGACACCT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGGTCACACGGGTCTTTaGCCTCACCCTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIGHTGL*PHPPAV
Trigger: CACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGGGGCGTGGTGTAGTTaGGGTCACACGGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIGAWCS*GHTGLW
Trigger: CCAAAGACCCGTGTGACCCCAACTACACCACGCCCC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCCAAGTGCAGGGGCGTaGTGTAGTTGGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIPSAGA*CSWGHT
Trigger: CGTGTGACCCCAACTACACCACGCCCCTGCACTTGG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCCAATCTTCCCGGCTTaGCTGTGGAACACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIPIFPA*LWNTSA
Trigger: GGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTAGCTCCAGGATGGGCTaGGACTGGGCACACCAATCT +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRISSRMG*DWAHQS
Trigger: AGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACTGTTCAGAAGCAGCTaGGCCACCTTGAGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALLFRSS*ATLSRP
Trigger: TGGCCGACTCAAGGTGGCCCAGCTGCTTCTGAACAG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACTCCTCGTCAGGTACTaGGGGATACTCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALLLVRY*GILPKV
Trigger: CACCTTTGGGAGTATCCCTCAGTACCTGACGAGGAG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCCTGGTAGTTCACGTTaGGCCTCTTTGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIPGSSR*ASLWSP
Trigger: TGGGCTCCACAAAGAGGCTCAACGTGAACTACCAGG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTATGTCAACAGTGGCCTaGGCCTCTAGCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIMSTVA*ASSSKA
Trigger: AGCCTTGCTGCTAGAGGCTCAGGCCACTGTTGACAT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTATGGGAGGTGGTGAACTaGTTCACTATGTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALWEVVN*FTMSSA
Trigger: GGCGCTGGACATAGTGAATCAGTTCACCACCTCCCA...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGGTTCCAGAAATCCTTaGGCGCTCGGACCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIGSRNP*ALGPSG
Trigger: TCCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTAGGTGCTCCGTGAACTaGCACCACACGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIRCSVN*HHTKES
Trigger: GCTTTCCTTCGTGTGGTGGCAGTTCACGGAGCACCT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGGATACTCCCAAAGGTaGTCCGTGAACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIGYSQR*SVNCHH
Trigger: GTGGTGGCAGTTCACGGAGCACCTTTGGGAGTATCC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACCAGCTCTCAGGAGCTaGCTGATGACTTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALPALRS*LMTSLW
Trigger: CCACAGAGAAGTCATCAGGCAGCTCCTGAGAGCTGG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACGTGATGACATCCCCTaGCCGGACATTGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALRDDIP*PDIESS
Trigger: ACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTATTGCAAAGGAATGCCTaGTTGGGGTCCCTCACCGTG +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALLQRNA*LGSLTV
Trigger: CACGGTGAGGGACCCCAAGCAGGCATTCCTTTGCAA...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTACCCATACTGGCTCCTaGGCTGAGCTCTACACTCAG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRITHTGS*AELYTQ
Trigger: CTGAGTGTAGAGCTCAGCCCAGGAGCCAGTATGGGT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACCCAAAGCAGCGTGGTaGAGGGCAGAGAATCCATCA +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALPKAAW*RAENPS
Trigger: TGATGGATTCTCTGCCCTCCACCACGCTGCTTTGGG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGTACCCGTCTTGGTCTaGCGGTTGATCTCGATCCCA +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIVPVLV*RLISIP
Trigger: TGGGATCGAGATCAACCGCCAGACCAAGACGGGTAC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTATCACATCTCCATTCTTaGCGGCGAGGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALSHLHS*RRGSGP
Trigger: AGGACCTGATCCTCGCCGTCAAGAATGGAGATGTGA...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTATGCCATTGCTGTCCTTaGTGTCAACAGTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALCHCCP*CQQWPE
Trigger: CTCAGGCCACTGTTGACATCAAGGACAGCAATGGCA...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGGCATGGGTTGGACTaGTGCTGGAGGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALRHGLD*CWRSIS
Trigger: AGAAATGCTCCTCCAGCATCAGTCCAACCCATGCCT...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTTCTTCTTGGCCTTGTTaGCCAGGCATGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRISSWPC*PGMGWT
Trigger: AGTCCAACCCATGCCTGGTCAACAAGGCCAAGAAGA...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR TCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTATGGCCTGGGAGGTGGTaGACTGATTCACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALWPGRW*TDSLCP
Trigger: TGGACATAGTGAATCAGTTCACCACCTCCCAGGCCA...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACTTGTTGACCAGGCATaGGTTGGACTGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALLVDQA*VGLMLE
Trigger: CTCCAGCATCAGTCCAACCCATGCCTGGTCAACAAG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTATAATGTCCATACTGTaGAGCCAGGTGCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIIMSIL*SQVQGD
Trigger: ATCCCCCTGCACCTGGCTGCACAGTATGGACATTAT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR GCA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAGTATTTGCAAAGGAATaGCTGCTTGGGGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: NFVICKEEMLTALPSLALVFAKE*LLGVPH
Trigger: GTGAGGGACCCCAAGCAGGCATTCCTTTGCAAATAC...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTATGGATATCAGCTTGTaGCTTCCGACAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIMDISL*LPTAPG
Trigger: TCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCAT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCTGATGACTTCTCTGTaGCCATTCTTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRILMTSL*PFLAAK
Trigger: CTTGGCTGCCAAGAATGGCCACAGAGAAGTCATCAG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTATGTCCAGCGCCGTCTaGTTATACGTATTCCGGATG +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIMSSAV*LYVFRM
Trigger: CATCCGGAATACGTATAACCAGACGGCGCTGGACAT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGGGGTGAAGGCTACATaGAAATCTGGATGGATATCA +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRIGVKAT*KSGWIS
Trigger: TGATATCCATCCAGATTTCCATGTAGCCTTCACCCC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CCA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTACATGGAAATCTGGATaGATATCAGCTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ICKEEMLTALPSLALRRITWKSG*ISACGF
Trigger: GAAGCCACAAGCTGATATCCATCCAGATTTCCATGT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS CCA 90 bp GCACTGGTCTCAGGGCTCTCTCCCGGCCGCCCGCCGGGGTCCGGCTaGCCCTGCTCGGTCCCTGGCACTCAGGACGGTGGCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: ALVSGLSPGRPPGSG*PCSVPGTQDGGSHS
Trigger: GGAGTGGGAGCCACCGTCCTGAGTGCCAGGGACCGAGCAGGGCCAGCCGGACCCCGGCGGGCGGCCGGGAGAGAGCCCTGAGACCAGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTGGGCGGTGGCTCAGGTaGTCTGCCAGGGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: GLGQWGQALPALRWAVGAGRWLR*SARDGG
Trigger: CCCGCCGTCCCTGGCAGACAACCTGAGCCACCGCCC...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCCCATGCCACAGCCCCTaGGAGGGCTCCCGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSPCHSP*EGSRFR
Trigger: CCGGAACCGGGAGCCCTCCAAGGGGCTGTGGCATGG...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS GCA 90 bp GGCAGCGGGGCCAGGCGTGGCACTGGCCACTCCGAAGGCCAGCAGTaGGGTCTGCAGTGGCTCTCTCTCCCGGCACTTGGGCCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: GSGARRGTGHSEGQQ*GLQWLSLPALGPPL
Trigger: AAGCGGAGGCCCAAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGGAGTGGCCAGTGCCACGCCTGGCCCCGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCGCAGCCAGCATTCCCTaGGGCCTCAGGCAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSAASIP*GLRQQR
Trigger: CCGCTGCTGCCTGAGGCCCAAGGGAATGCTGGCTGC...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS TCA 90 bp GTGCAGCCAGGTGCAGGGGGATCTGTCCGTCCAGCGAGGCGGCATTaGCAGCCGCAGAGGCGCGCAGCAGCAGCCTCACAGGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: VQPGAGGSVRPARRH*QPQRRAAAASQAPA
Trigger: GGCTGGAGCCTGTGAGGCTGCTGCTGCGCGCCTCTGCGGCTGTCAATGCCGCCTCGCTGGACGGACAGATCCCCCTGCACCTGGCTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
ENST00000583246.1
ENST00000583258.5
CDS-3UTR CAA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGATCAGCTCCGGACCCTaGGCCAGCCGGCGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEISSGP*ASRRPP
Trigger: AGGCGGGCGCCGGCTGGCCAAGGGTCCGGAGCTGAT...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCGAGACTCGCCAGGAGTaGGGGAAGGCAGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSETRQE*GKAVGQ
Trigger: CTGCCCCACTGCCTTCCCCAACTCCTGGCGAGTCTC...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS TCA 90 bp GCGCGTCCTTCCCCTCCAGCAGCTGTTCTGGCCGCACGTCCTGGGTaGAGATCTGCTCCCCAGAGCGGCAGTTGGCCAGAGGGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: ARPSPPAAVLAARPG*RSAPQSGSWPEGGG
Trigger: GCCACCGCCCTCTGGCCAACTGCCGCTCTGGGGAGCAGATCTTCACCCAGGACGTGCGGCCAGAACAGCTGCTGGAGGGGAAGGACGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp GGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCTGCTCACCAGCTGCTaGTGGTACTGTGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GLGQWGQALPALRWAVGALLTSC*WYCGSP
Trigger: GGGGCTGCCACAGTACCACAAGCAGCTGGTGAGCAG...AGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS GCA 90 bp GGGCCAGGCGTGGCACTGGCCACTCCGAAGGCCAGCAGTGCGGTCTaGAGTGGCTCTCTCTCCCGGCACTTGGGCCTCCGCTTAACAGTG +
Preference number: 5 (lower is better)
Translates to: GPGVALATPKASSAV*SGSLSRHLGLRLTV
Trigger: CACTGTTAAGCGGAGGCCCAAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGGAGTGGCCAGTGCCACGCCTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp GCTCTCAGTGCAGCTGCCAGGGACGAGCTGGTCTGCTCCAGTCTCTaGTGGGCCTGGCCTGGGCCCACAGTCCCAGTGCTCTCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: ALSAAARDELVCSSL*WAWPGPTVPVLSGR
Trigger: ACGGCCTGAGAGCACTGGGACTGTGGGCCCAGGCCAGGCCCAGCAGAGACTGGAGCAGACCAGCTCGTCCCTGGCAGCTGCACTGAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 90 bp TCTACACTCAGGAGTCCAGGGCAAAGGCAGGCAACGGGTCCAAGCTaGGGCGTCAGGGCGCCATGCCACAGCCCCTTGGAGGGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: STLRSPGQRQATGPS*GVRAPCHSPLEGSR
Trigger: CCGGGAGCCCTCCAAGGGGCTGTGGCATGGCGCCCTGACGCCCCAGCTTGGACCCGTTGCCTGCCTTTGCCCTGGACTCCTGAGTGTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 90 bp GCAGAGGGCAGTGGCTGGGCGTTCTCAATCAGGAGGCCAGGGCCATaGCCATTAGTGCCCTCAGAGCTCTGCCCGCTGCCGGCACTGCGG +
Preference number: 5 (lower is better)
Translates to: AEGSGWAFSIRRPGP*PLVPSELCPLPALR
Trigger: CCGCAGTGCCGGCAGCGGGCAGAGCTCTGAGGGCACTAATGGCCATGGCCCTGGCCTCCTGATTGAGAACGCCCAGCCACTGCCCTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 90 bp CCCCCTGCCATGGCCGCCTGTAGCTCTGGGCTTAGTTCGCTGCCCTaGAAGGTGAGGAGCCGTGGGCCAGCTGTAGCTGGGCCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PPAMAACSSGLSSLP*KVRSRGPAVAGPSP
Trigger: CGGAGAAGGCCCAGCTACAGCTGGCCCACGGCTCCTCACCTTCCAGGGCAGCGAACTAAGCCCAGAGCTACAGGCGGCCATGGCAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 90 bp CCGCAGGGCAAAGGACTGGCTGCGAGGAGTCCCCCGAGCTGGGGTTaGGGTCACACTAGGACTGGTCCGGACAAGGGCACTGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PQGKGLAARSPPSWG*GHTRTGPDKGTASW
Trigger: CCAGGACGCAGTGCCCTTGTCCGGACCAGTCCTAGTGTGACCCCAACCCCAGCTCGGGGGACTCCTCGCAGCCAGTCCTTTGCCCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 90 bp AAGGCTAGAAGCTGGAGGAGACTCGCCAGGAGTTGGGGAAGGCAGTaGGGCAGCGGGGCCAGGCGTGGCACTGGCCACTCCGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: KARSWRRLARSWGRQ*GSGARRGTGHSEGQ
Trigger: CTGGCCTTCGGAGTGGCCAGTGCCACGCCTGGCCCCGCTGCCCCACTGCCTTCCCCAACTCCTGGCGAGTCTCCTCCAGCTTCTAGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGATCAGCTCCGGACCCTaGGCCAGCCGGCGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: RRSLASQVLRWAAPQELWISSGP*ASRRPP
Trigger: AGGCGGGCGCCGGCTGGCCAAGGGTCCGGAGCTGAT...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp TCAATCAGGAGGCCAGGGCCATGGCCATTAGTGCCCTCAGAGCTCTaGCCGCTGCCGGCACTGCGGATGCTGCCCACGCTGCCCTCACTG +
Preference number: 5 (lower is better)
Translates to: SIRRPGPWPLVPSEL*PLPALRMLPTLPSL
Trigger: CAGTGAGGGCAGCGTGGGCAGCATCCGCAGTGCCGGCAGCGGGCAGAGCTCTGAGGGCACTAATGGCCATGGCCCTGGCCTCCTGATTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCGTCTTGGTCTGGCGGTaGATCTCGATCCCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSVLVWR*ISIPAL
Trigger: GAGAGCTGGGATCGAGATCAACCGCCAGACCAAGAC...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGGGGCGGTGGCTCAGGTaGTCTGCCAGGGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: MQRRSLASQVLRWAAPQEGRWLR*SARDGG
Trigger: CCCGCCGTCCCTGGCAGACAACCTGAGCCACCGCCC...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTTTCCTGTGCCCAGGCTaGGTCACCCCGATGGCCGTC +
Preference number: 5 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAFLCPG*VTPMAV
Trigger: GACGGCCATCGGGGTGACCAAGCCTGGGCACAGGAA...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp TTCCCCTCCAGCAGCTGTTCTGGCCGCACGTCCTGGGTGAAGATCTaGTCCCCAGAGCGGCAGTTGGCCAGAGGGCGGTGGCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FPSSSCSGRTSWVKI*SPERQLARGRWLRL
Trigger: CAACCTGAGCCACCGCCCTCTGGCCAACTGCCGCTCTGGGGAGCAGATCTTCACCCAGGACGTGCGGCCAGAACAGCTGCTGGAGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 90 bp GGAGGGCTCCCGGTTCCGGGGGAGCAAGTCAGGTGTCCCAGGCAGTaGGCTCCTCGTCAGGTACTGAGGGATACTCCCAAAGGTGCTCCG +
Preference number: 5 (lower is better)
Translates to: GGLPVPGEQVRCPRQ*APRQVLRDTPKGAP
Trigger: CGGAGCACCTTTGGGAGTATCCCTCAGTACCTGACGAGGAGCCCACTGCCTGGGACACCTGACTTGCTCCCCCGGAACCGGGAGCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 90 bp GTCCCTAGGGTGGCAGGGGCCTCTTCTGTGCTGGGGCAAAGGCAGTaGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: VPRVAGASSVLGQRQ*TSAGHSGHCWRAQS
Trigger: GGACTGAGCCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCACAGAAGAGGCCCCTGCCACCCTAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCGTCTTCTTGGCCTTGTaGACCAGGCATGGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: PGPMGSGSPCPQVGSRGSVFLAL*TRHGLD
Trigger: GTCCAACCCATGCCTGGTCAACAAGGCCAAGAAGAC...GGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGGGGTCACACGGGTCTTaGGCCTCACCCTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: VLRWAAPQELWCPQPRAEGSHGS*ASPSSS
Trigger: ACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACCC...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTAGCGCCGTACCCGTCTaGGTCTGGCGGTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: QVLRWAAPQELWCPQPRASAVPV*VWRLIS
Trigger: CGAGATCAACCGCCAGACCAAGACGGGTACGGCGCT...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGAGCGCCGTACCCGTCTaGGTCTGGCGGTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: VLRWAAPQELWCPQPRAESAVPV*VWRLIS
Trigger: CGAGATCAACCGCCAGACCAAGACGGGTACGGCGCT...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGTCCCCAGAGCGGCAGTaGGCCAGAGGGCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: MQRRSLASQVLRWAAPQESPERQ*ARGRWL
Trigger: GAGCCACCGCCCTCTGGCCAACTGCCGCTCTGGGGA...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp GTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGAGACTCCAGCAGGTCCGTaGGGATGTAGCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VLRWAAPQELWCPQPRAETPAGP*GCSWAA
Trigger: GGCTGCCCAGCTACATCCCAACGGACCTGCTGGAGT...CTCAGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGGCCACCGACACAGGCTaGGGGGCTGTTCCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRATDTG*GAVPAP
Trigger: CGGAGCAGGAACAGCCCCCAAGCCTGTGTCGGTGGC...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 90 bp GGTGACAGCACGTGCCCCACTCCCCAGCCACCCTTGATGGCTCACTaGGATGTAGCTGGGCAGCCACTCGGCGATGCTGAGCTGAGCGAT +
Preference number: 5 (lower is better)
Translates to: GDSTCPTPQPPLMAH*DVAGQPLGDAELSD
Trigger: ATCGCTCAGCTCAGCATCGCCGAGTGGCTGCCCAGCTACATCCCAGTGAGCCATCAAGGGTGGCTGGGGAGTGGGGCACGTGCTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580021.1
CDS CCA 90 bp TACTGTGGCAGCCCCAGTGCACACAGCCACTCCAGCAGGTCCGTCTaGAAGAGCACCGTCCTCAGAACAACTCCCAGCCAGCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: YCGSPSAHSHSSRSV*KSTVLRTTPSQPPP
Trigger: GGGCGGAGGCTGGCTGGGAGTTGTTCTGAGGACGGTGCTCTTCCAGACGGACCTGCTGGAGTGGCTGTGTGCACTGGGGCTGCCACAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580021.1
CDS-3UTR CAA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGCGCACCACCTCGGTCTaGCCATACAGTGCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RRSLASQVLRWAAPQELWRTTSV*PYSAAS
Trigger: CGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGCG...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGGGGATGCCCACCCGCTaGCTGACCACCTCGACAATG +
Preference number: 5 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGGMPTR*LTTSTM
Trigger: CATTGTCGAGGTGGTCAGCAAGCGGGTGGGCATCCC...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTCCCCAGAGCGGCAGTaGGCCAGAGGGCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAESPERQ*ARGRWL
Trigger: GAGCCACCGCCCTCTGGCCAACTGCCGCTCTGGGGA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGGAGACTCGCCAGGAGTaGGGGAAGGCAGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: RRSLASQVLRWAAPQELWETRQE*GKAVGQ
Trigger: CTGCCCCACTGCCTTCCCCAACTCCTGGCGAGTCTC...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGGCTGGGGGTGCCCTCTaGCTCCTTGGTGCCAATGCT +
Preference number: 5 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGAGGAL*LLGANA
Trigger: AGCATTGGCACCAAGGAGCAAGAGGGCACCCCCAGC...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGACCCTGGGAGGGGCTTaGCTGAGATGCAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGTLGGA*LRCSGG
Trigger: ACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGT...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CTGGGCCAATGGGGTCAGGCTCTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTGCAAGAGGCATTCCCTaGGCACAACTTGGGACATGG +
Preference number: 5 (lower is better)
Translates to: LGQWGQALPALRWAVGAPARGIP*AQLGTW
Trigger: CCATGTCCCAAGTTGTGCCAAGGGAATGCCTCTTGC...AGGAGCCCCGACTGCCCACCTGAGGGCAGGGAGAGCCTGACCCCATTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS GCA 90 bp GTAGCCGCTGCTCACCAGCTGCTTGTGGTACTGTGGCAGCCCCAGTaGACACAGCCACTCCAGCAGGTCCGTTGGGATGTAGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VAAAHQLLVVLWQPQ*TQPLQQVRWDVAGQ
Trigger: CTGCCCAGCTACATCCCAACGGACCTGCTGGAGTGGCTGTGTGCACTGGGGCTGCCACAGTACCACAAGCAGCTGGTGAGCAGCGGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp TTGCTCCTTGGTGCCAATGCTCTTCTCTGCGGCTCTCAGTGCAGCTaGCAGGGACGAGCTGGTCTGCTCCAGTCTCTGCTGGGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LLLGANALLCGSQCS*QGRAGLLQSLLGLA
Trigger: GGCCAGGCCCAGCAGAGACTGGAGCAGACCAGCTCGTCCCTGGCAGCTGCACTGAGAGCCGCAGAGAAGAGCATTGGCACCAAGGAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp GCCCTCTTGCTCCTTGGTGCCAATGCTCTTCTCTGCGGCTCTCAGTaGAGCTGCCAGGGACGAGCTGGTCTGCTCCAGTCTCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: ALLLLGANALLCGSQ*SCQGRAGLLQSLLG
Trigger: GCCCAGCAGAGACTGGAGCAGACCAGCTCGTCCCTGGCAGCTGCACTGAGAGCCGCAGAGAAGAGCATTGGCACCAAGGAGCAAGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp GTAGCCGCTGCTCACCAGCTGCTTGTGGTACTGTGGCAGCCCCAGTaGACACAGCCACTCCAGCAGGTCCGTCTGGAAGAGCACCGTCCT +
Preference number: 5 (lower is better)
Translates to: VAAAHQLLVVLWQPQ*TQPLQQVRLEEHRP
Trigger: AGGACGGTGCTCTTCCAGACGGACCTGCTGGAGTGGCTGTGTGCACTGGGGCTGCCACAGTACCACAAGCAGCTGGTGAGCAGCGGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580021.1
CDS CCA 90 bp CAGGATGGGCTGGGACTGGGCACACCAATCTTCCCGGCTTGGCTGTaGAACACCAGTGCCCACCCAGAGAGCAGCCAGCATTCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: QDGLGLGTPIFPAWL*NTSAHPESSQHSLG
Trigger: CCCAAGGGAATGCTGGCTGCTCTCTGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 90 bp CAGCTCCAGGATGGGCTGGGACTGGGCACACCAATCTTCCCGGCTTaGCTGTGGAACACCAGTGCCCACCCAGAGAGCAGCCAGCATTCC +
Preference number: 5 (lower is better)
Translates to: QLQDGLGLGTPIFPA*LWNTSAHPESSQHS
Trigger: GGAATGCTGGCTGCTCTCTGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS-3UTR CAA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTTCCAGGGGCGTCTTCTaGGCCTTGTTGACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: QVLRWAAPQELWCPQPRASRGVF*ALLTRH
Trigger: ATGCCTGGTCAACAAGGCCAAGAAGACGCCCCTGGA...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTGTCTTGGTCTGGCGGTaGATCTCGATCCCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAVLVWR*ISIPAL
Trigger: GAGAGCTGGGATCGAGATCAACCGCCAGACCAAGAC...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGCGCACCACCTCGGTCTaGCCATACAGTGCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQRTTSV*PYSAAS
Trigger: CGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGCG...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TGCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTGGGCACTGCTGGAGGGTCTCTCTCCCGGCACTaGGGCCTCCGCTTAACAGTG +
Preference number: 5 (lower is better)
Translates to: CWGKGSGLRQVTVGTAGGSLSRH*GLRLTV
Trigger: CACTGTTAAGCGGAGGCCCAAGTGCCGGGAGAGAGA...CCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGCCACCGACACAGGCTaGGGGGCTGTTCCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPATDTG*GAVPAP
Trigger: CGGAGCAGGAACAGCCCCCAAGCCTGTGTCGGTGGC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS TCA 90 bp CGGCGAGGATCAGGTCCTGTTCACGACCCATACTGGCTCCTGGGCTaGGCTCTACACTCAGGAGTCCAGGGCAAAGGCAGGCAACGGGTC +
Preference number: 5 (lower is better)
Translates to: RRGSGPVHDPYWLLG*ALHSGVQGKGRQRV
Trigger: GACCCGTTGCCTGCCTTTGCCCTGGACTCCTGAGTGTAGAGCTCAGCCCAGGAGCCAGTATGGGTCGTGAACAGGACCTGATCCTCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS-3UTR CAA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTCTCTCTCCCGGCACTaGGGCCTCCGCTTAACAGTG +
Preference number: 5 (lower is better)
Translates to: RRSLASQVLRWAAPQELWSLSRH*GLRLTV
Trigger: CACTGTTAAGCGGAGGCCCAAGTGCCGGGAGAGAGA...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp GAGGAGAAAAGGCACCGCAAAGCCACAGCTGAGGGTGACAGCACGTaGCCCACTCCCCAGCCACCCTTGATGGCTCACTGGGATGTAGCT +
Preference number: 5 (lower is better)
Translates to: EEKRHRKATAEGDST*PTPQPPLMAHWDVA
Trigger: AGCTACATCCCAGTGAGCCATCAAGGGTGGCTGGGGAGTGGGGCACGTGCTGTCACCCTCAGCTGTGGCTTTGCGGTGCCTTTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580021.1
CDS-3UTR CAA 90 bp CAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGTGCCCACAGCCGCGGGCTTGGATGGATATCAGCTaGTGGCTTCCGACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: QVLRWAAPQELWCPQPRAWMDIS*WLPTAP
Trigger: TGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCA...AGCCCGCGGCTGTGGGCACCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp CGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGCTGTGGGGCGTCTTCTTGGCCTaGTTGACCAGGCATGGGTTG +
Preference number: 5 (lower is better)
Translates to: RRSLASQVLRWAAPQELWGVFLA*LTRHGL
Trigger: CAACCCATGCCTGGTCAACAAGGCCAAGAAGACGCC...CCACAGCTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCGGGTCACACGGGTCTTaGGCCTCACCCTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LLNRSNPGRGFAEMQRRSGSHGS*ASPSSS
Trigger: ACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACCC...GGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGTCCCGCAGTAGCTGCTaGATTTCCCGGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAESRSSC*ISRLAW
Trigger: CCAGGCCAGCCGGGAAATCAAGCAGCTACTGCGGGA...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCCCGCAGTAGCTGCTaGATTTCCCGGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPSRSSC*ISRLAW
Trigger: CCAGGCCAGCCGGGAAATCAAGCAGCTACTGCGGGA...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCGGGATGCCCACCCGCTaGCTGACCACCTCGACAATG +
Preference number: 5 (lower is better)
Translates to: FAEMQRRSLASQVLRWAAGMPTR*LTTSTM
Trigger: CATTGTCGAGGTGGTCAGCAAGCGGGTGGGCATCCC...GGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp AGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGTTCCTGTGCCCAGGCTaGGTCACCCCGATGGCCGTC +
Preference number: 5 (lower is better)
Translates to: SRAVLLNRSNPGRGFAEMFLCPG*VTPMAV
Trigger: GACGGCCATCGGGGTGACCAAGCCTGGGCACAGGAA...CATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp GGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTACTCCAGCAGGTCCGTaGGGATGTAGCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GFAEMQRRSLASQVLRWATPAGP*GCSWAA
Trigger: GGCTGCCCAGCTACATCCCAACGGACCTGCTGGAGT...AGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGACACACGCCGCTGGGGGTGCCCTCTaGCTCCTTGGTGCCAATGCT +
Preference number: 5 (lower is better)
Translates to: YLHVLCTPTERGPGQTHAAGGAL*LLGANA
Trigger: AGCATTGGCACCAAGGAGCAAGAGGGCACCCCCAGC...GGCGTGTGTCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp GGGGCAGGAGCTGCCTGGGCACCACCGCTGTGTATTTACATGTCCTCTGTACACACCCTGGGAGGGGCTTaGCTGAGATGCAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GAGAAWAPPLCIYMSSVHTLGGA*LRCSGG
Trigger: ACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGT...GTGTACAGAGGACATGTAAATACACAGCGGTGGTGCCCAGGCAGCTCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS TCA 90 bp GGGAGCAAGTCAGGTGTCCCAGGCAGTGGGCTCCTCGTCAGGTACTaGGGGATACTCCCAAAGGTGCTCCGTGAACTGCCACCACACGAA +
Preference number: 5 (lower is better)
Translates to: GSKSGVPGSGLLVRY*GILPKVLRELPPHE
Trigger: TTCGTGTGGTGGCAGTTCACGGAGCACCTTTGGGAGTATCCCTCAGTACCTGACGAGGAGCCCACTGCCTGGGACACCTGACTTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS-3UTR CAA 90 bp CAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGAGCGGGCGCATGCCATaGCTGTCCTTGATGTCAACA +
Preference number: 5 (lower is better)
Translates to: QTLGGALLRCSGGPSLVRSGRMP*LSLMST
Trigger: TGTTGACATCAAGGACAGCAATGGCATGCGCCCGCT...CCTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp ATGCAGCGGAGGTCCCTCGCTAGTCAGGTTCTAAGGTGGGCTGCCCCACAAGAGAGCAGCTGGGCCACCTaGAGTCGGCCAAATTCACAG +
Preference number: 5 (lower is better)
Translates to: MQRRSLASQVLRWAAPQESSWAT*SRPNSQ
Trigger: CTGTGAATTTGGCCGACTCAAGGTGGCCCAGCTGCT...CTCTTGTGGGGCAGCCCACCTTAGAACCTGACTAGCGAGGGACCTCCGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGACTGCTCACCAGCTGCTaGTGGTACTGTGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGLLTSC*WYCGSP
Trigger: GGGGCTGCCACAGTACCACAAGCAGCTGGTGAGCAG...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGAGAAGCCCCTCCCCCATaGTGTCCTCTCAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: PLCIYMSSVHLRRGGPAREAPPP*CPLRQL
Trigger: CAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTC...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS CCA 90 bp CTGGATGGATATCAGCTTGTGGCTTCCGACAGCTCCAGGATGGGCTaGGACTGGGCACACCAATCTTCCCGGCTTGGCTGTGGAACACCA +
Preference number: 5 (lower is better)
Translates to: LDGYQLVASDSSRMG*DWAHQSSRLGCGTP
Trigger: TGGTGTTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 90 bp CAGCCAAGTGCAGGGGCGTGGTGTAGTTGGGGTCACACGGGTCTTTaGCCTCACCCTCCAGCAGTGCCACACATAAGTGGCTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QPSAGAWCSWGHTGL*PHPPAVPHISGCSE
Trigger: TTCTGAACAGCCACTTATGTGTGGCACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACCCCAACTACACCACGCCCCTGCACTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
CDS-3UTR CAA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGGTCTTCTTGGCCTTGTaGACCAGGCATGGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQVFLAL*TRHGLD
Trigger: GTCCAACCCATGCCTGGTCAACAAGGCCAAGAAGAC...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCGGCGTCTTCTTGGCCTaGTTGACCAGGCATGGGTTG +
Preference number: 5 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPGVFLA*LTRHGL
Trigger: CAACCCATGCCTGGTCAACAAGGCCAAGAAGACGCC...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp CCGCTGTGTATTTACATGTCCTCTGTACACCTACGGAGAGGGGGCCCGGCCAGATCCAGGGGCGTCTTCTaGGCCTTGTTGACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: PLCIYMSSVHLRRGGPARSRGVF*ALLTRH
Trigger: ATGCCTGGTCAACAAGGCCAAGAAGACGCCCCTGGA...TCTGGCCGGGCCCCCTCTCCGTAGGTGTACAGAGGACATGTAAATACACAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp AGGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAGCAGCTGGGCCACCTaGAGTCGGCCAAATTCACAG +
Preference number: 5 (lower is better)
Translates to: RSRAVLLNRSNPGRGFAESSWAT*SRPNSQ
Trigger: CTGTGAATTTGGCCGACTCAAGGTGGCCCAGCTGCT...CTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS-3UTR CAA 90 bp ATGGTGGGTGGCAAGAGGCATTCCCTTGGCACAACTTGGGACATGGGCTGGGGGAGGTTCCAGAAATCCTaGAGCGCTCGGACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: MVGGKRHSLGTTWDMGWGRFQKS*SARTFR
Trigger: CCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACCT...CCCCCAGCCCATGTCCCAAGTTGTGCCAAGGGAATGCCTCTTGCCACCCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp TCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCTCGCTAGTCAGAGGTTCCAGAAATCCTaGAGCGCTCGGACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SNPGRGFAEMQRRSLASQRFQKS*SARTFR
Trigger: CCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACCT...CTGACTAGCGAGGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 90 bp GCAAAGGAATGCCTGCTTGGGGTCCCTCACCGTGATGACATCCCCTaGCCGGACATTGAGAGCAGTGGGATCGTGGAGGTTCCAGAAATC +
Preference number: 5 (lower is better)
Translates to: AKECLLGVPHRDDIP*PDIESSGIVEVPEI
Trigger: GATTTCTGGAACCTCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACGGTGAGGGACCCCAAGCAGGCATTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS CCA 90 bp ACCGTGATGACATCCCCTGCCCGGACATTGAGAGCAGTGGGATCGTaGAGGTTCCAGAAATCCTTGAGCGCTCGGACCTTCAGGATCCCT +
Preference number: 5 (lower is better)
Translates to: TVMTSPARTLRAVGS*RFQKSLSARTFRIP
Trigger: AGGGATCCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACCTCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
CDS-3UTR CAA 90 bp CTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAACCAATCTTCCCGGCTaGGCTGTGGAACACCAGTGC +
Preference number: 5 (lower is better)
Translates to: LSCSIDQTLGGALLRCSGTNLPG*AVEHQC
Trigger: GCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGT...TCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAGTCACATCTCCATTCTaGACGGCGAGGATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRVTSPF*TARIRS
Trigger: GGACCTGATCCTCGCCGTCAAGAATGGAGATGTGAC...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS-3UTR CAA 90 bp TGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGATGCAGCGGAGGTCCCAGCGGGCGCATGCCATaGCTGTCCTTGATGTCAACA +
Preference number: 5 (lower is better)
Translates to: CSIDQTLGGALLRCSGGPSGRMP*LSLMST
Trigger: TGTTGACATCAAGGACAGCAATGGCATGCGCCCGCT...GGGACCTCCGCTGCATCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 90 bp GAAATCTGGATGGATATCAGCTTGTGGCTTCCGACAGCTCCAGGATaGGCTGGGACTGGGCACACCAATCTTCCCGGCTTGGCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: EIWMDISLWLPTAPG*AGTGHTNLPGLAVE
Trigger: TTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCAGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS-3UTR CAA 90 bp GGAGCAGGGCTGTCCTGCTCAATCGATCAAACCCTGGGAGGGGCTTTGCTGAGAGGAATGGTGTTTTCATaGGTGTTAGTTGGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: GAGLSCSIDQTLGGALLRGMVFS*VLVGGR
Trigger: TCTTCCCCCAACTAACACCAATGAAAACACCATTCC...TCTCAGCAAAGCCCCTCCCAGGGTTTGATCGATTGAGCAGGACAGCCCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS CCA 90 bp GGAAAGCTAATCTTTGAGGGGGTGAAGGCTACATGGAAATCTGGATaGATATCAGCTTGTGGCTTCCGACAGCTCCAGGATGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: GKLIFEGVKATWKSG*ISACGFRQLQDGLG
Trigger: TCCCAGCCCATCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCAGATTTCCATGTAGCCTTCACCCCCTCAAAGATTAGCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTACCATGCCACAGCCCCTaGGAGGGCTCCCGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALPCHSP*EGSRFR
Trigger: CCGGAACCGGGAGCCCTCCAAGGGGCTGTGGCATGG...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS CCA 90 bp CCACCACACGAAGGAAAGCTAATCTTTGAGGGGGTGAAGGCTACATaGAAATCTGGATGGATATCAGCTTGTGGCTTCCGACAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PPHEGKLIFEGVKAT*KSGWISACGFRQLQ
Trigger: CTGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCAGATTTCCATGTAGCCTTCACCCCCTCAAAGATTAGCTTTCCTTCGTGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS-3UTR CAA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGCAGCCAGCATTCCCTaGGGCCTCAGGCAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: ICKEEMLTALPSLALRRIAASIP*GLRQQR
Trigger: CCGCTGCTGCCTGAGGCCCAAGGGAATGCTGGCTGC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS GCA 90 bp GCCCAAATAAGTAACAGCAATCATTTGTATTTGCAAAGGAATGCCTaGTTGGGGTCCCTCACCGTGATGACATCCCCTGCCCGGACATTG +
Preference number: 5 (lower is better)
Translates to: AQISNSNHLYLQRNA*LGSLTVMTSPARTL
Trigger: CAATGTCCGGGCAGGGGATGTCATCACGGTGAGGGACCCCAAGCAGGCATTCCTTTGCAAATACAAATGATTGCTGTTACTTATTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCGCACCACCTCGGTCTaGCCATACAGTGCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: ICKEEMLTALPSLALRRIRTTSV*PYSAAS
Trigger: CGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGCG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAGGGTCACACGGGTCTTaGGCCTCACCCTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALGSHGS*ASPSSS
Trigger: ACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACCC...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGCGCCGTACCCGTCTaGGTCTGGCGGTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALSAVPV*VWRLIS
Trigger: CGAGATCAACCGCCAGACCAAGACGGGTACGGCGCT...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTATCCCGCAGTAGCTGCTaGATTTCCCGGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALSRSSC*ISRLAW
Trigger: CCAGGCCAGCCGGGAAATCAAGCAGCTACTGCGGGA...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTACCAATCTTCCCGGCTaGGCTGTGGAACACCAGTGC +
Preference number: 5 (lower is better)
Translates to: ICKEEMLTALPSLALRRITNLPG*AVEHQC
Trigger: GCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAGGCGTCTTCTTGGCCTaGTTGACCAGGCATGGGTTG +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALGVFLA*LTRHGL
Trigger: CAACCCATGCCTGGTCAACAAGGCCAAGAAGACGCC...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTATCCAGGGGCGTCTTCTaGGCCTTGTTGACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALSRGVF*ALLTRH
Trigger: ATGCCTGGTCAACAAGGCCAAGAAGACGCCCCTGGA...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGCAGCTGGGCCACCTaGAGTCGGCCAAATTCACAG +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALSSWAT*SRPNSQ
Trigger: CTGTGAATTTGGCCGACTCAAGGTGGCCCAGCTGCT...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGTCTTGGTCTGGCGGTaGATCTCGATCCCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: ICKEEMLTALPSLALRRIVLVWR*ISIPAL
Trigger: GAGAGCTGGGATCGAGATCAACCGCCAGACCAAGAC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTCAAAGGAATGCCTGCTaGGGGTCCCTCACCGTGATG +
Preference number: 5 (lower is better)
Translates to: ICKEEMLTALPSLALRRIQRNAC*GSLTVM
Trigger: CATCACGGTGAGGGACCCCAAGCAGGCATTCCTTTG...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTGTCACATCTCCATTCTaGACGGCGAGGATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: ICKEEMLTALPSLALRRIVTSPF*TARIRS
Trigger: GGACCTGATCCTCGCCGTCAAGAATGGAGATGTGAC...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp ATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGAAGAATTAGCGGGCGCATGCCATaGCTGTCCTTGATGTCAACA +
Preference number: 5 (lower is better)
Translates to: ICKEEMLTALPSLALRRISGRMP*LSLMST
Trigger: TGTTGACATCAAGGACAGCAATGGCATGCGCCCGCT...AATTCTTCTTAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAGTCTTCTTGGCCTTGTaGACCAGGCATGGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALVFLAL*TRHGLD
Trigger: GTCCAACCCATGCCTGGTCAACAAGGCCAAGAAGAC...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGGTTCCAGAAATCCTaGAGCGCTCGGACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALRFQKS*SARTFR
Trigger: CCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACCT...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS-3UTR CAA 90 bp AATTTTGTCATCTGTAAAGAAGAAATGCTAACAGCACTGCCTTCCCTGGCTTTAAGTAACAGCAATCATTaGTATTTGCAAAGGAATGCC +
Preference number: 5 (lower is better)
Translates to: NFVICKEEMLTALPSLALSNSNH*YLQRNA
Trigger: GGCATTCCTTTGCAAATACAAATGATTGCTGTTACT...TAAAGCCAGGGAAGGCAGTGCTGTTAGCATTTCTTCTTTACAGATGACAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS GCA 72 bp GCCAGCCGGCGCCCGCCTTCGCTGAGGGCCTCCCCCTaGAGCAGGCCCCGCCGAAGCTCCGCCAGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: ASRRPPSLRASP*SRPRRSSASRF
Trigger: GAAGCGGCTGGCGGAGCTTCGGCGGGGCCTGCTGCAGGGGGAGGCCCTCAGCGAAGGCGGGCGCCGGCTGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000580021.1
CDS CCA 72 bp TCAGGGCTCTCTCCCGGCCGCCCGCCGGGGTCCGGCTaGCCCTGCTCGGTCCCTGGCACTCAGGACGGTGGC +
Preference number: 6 (lower is better)
Translates to: SGLSPGRPPGSG*PCSVPGTQDGG
Trigger: GCCACCGTCCTGAGTGCCAGGGACCGAGCAGGGCCAGCCGGACCCCGGCGGGCGGCCGGGAGAGAGCCCTGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321617.8
CDS GCA 72 bp CAGGCAACGGGTCCAAGCTGGGGCGTCAGGGCGCCATaGCACAGCCCCTTGGAGGGCTCCCGGTTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: QATGPSWGVRAP*HSPLEGSRFRG
Trigger: CCCCCGGAACCGGGAGCCCTCCAAGGGGCTGTGGCATGGCGCCCTGACGCCCCAGCTTGGACCCGTTGCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CAA 90 bp CCTTCTCCGTTCTCCAGTCCCTCGATGGCCATCAGCTCCGGACCCTaGGCCAGCCGGCGCCCGCCTTCGCTGAGGGCCTCCCCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PSPFSSPSMAISSGP*ASRRPPSLRASPCS
Trigger: GCTGCAGGGGGAGGCCCTCAGCGAAGGCGGGCGCCGGCTGGCCAAGGGTCCGGAGCTGATGGCCATCGAGGGACTGGAGAACGGAGAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000580021.1
CDS CAA 72 bp TTCTCCAGTCCCTCGATGGCCATCAGCTCCGGACCCTaGGCCAGCCGGCGCCCGCCTTCGCTGAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: FSSPSMAISSGP*ASRRPPSLRAS
Trigger: GGAGGCCCTCAGCGAAGGCGGGCGCCGGCTGGCCAAGGGTCCGGAGCTGATGGCCATCGAGGGACTGGAGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000580021.1
CDS CAA 90 bp TGTGCAGCCAGGTGCAGGGGGATCTGTCCGTCCAGCGAGGCGGCATaGACAGCCGCAGAGGCGCGCAGCAGCAGCCTCACAGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: CAARCRGICPSSEAA*TAAEARSSSLTGSS
Trigger: GCTGGAGCCTGTGAGGCTGCTGCTGCGCGCCTCTGCGGCTGTCAATGCCGCCTCGCTGGACGGACAGATCCCCCTGCACCTGGCTGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
ENST00000583246.1
ENST00000583258.5
CDS TCA 72 bp GGTGCAGGGGGATCTGTCCGTCCAGCGAGGCGGCATTaGCAGCCGCAGAGGCGCGCAGCAGCAGCCTCACAG +
Preference number: 6 (lower is better)
Translates to: GAGGSVRPARRH*QPQRRAAAASQ
Trigger: CTGTGAGGCTGCTGCTGCGCGCCTCTGCGGCTGTCAATGCCGCCTCGCTGGACGGACAGATCCCCCTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
ENST00000583246.1
ENST00000583258.5
CDS GCA 72 bp AGGCCAGGGCCATGGCCATTAGTGCCCTCAGAGCTCTaGCCGCTGCCGGCACTGCGGATGCTGCCCACGCTG +
Preference number: 6 (lower is better)
Translates to: RPGPWPLVPSEL*PLPALRMLPTL
Trigger: CAGCGTGGGCAGCATCCGCAGTGCCGGCAGCGGGCAGAGCTCTGAGGGCACTAATGGCCATGGCCCTGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 72 bp GTGGCACTGGCCACTCCGAAGGCCAGCAGTGCGGTCTaGAGTGGCTCTCTCTCCCGGCACTTGGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: VALATPKASSAV*SGSLSRHLGLR
Trigger: GCGGAGGCCCAAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGGAGTGGCCAGTGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 72 bp GCCAGGCGTGGCACTGGCCACTCCGAAGGCCAGCAGTaGGGTCTGCAGTGGCTCTCTCTCCCGGCACTTGGG +
Preference number: 6 (lower is better)
Translates to: ARRGTGHSEGQQ*GLQWLSLPALG
Trigger: CCCAAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGGAGTGGCCAGTGCCACGCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp AGGAGTCCAGGGCAAAGGCAGGCAACGGGTCCAAGCTaGGGCGTCAGGGCGCCATGCCACAGCCCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: RSPGQRQATGPS*GVRAPCHSPLE
Trigger: CTCCAAGGGGCTGTGGCATGGCGCCCTGACGCCCCAGCTTGGACCCGTTGCCTGCCTTTGCCCTGGACTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp GCTCAGGTTGTCTGCCAGGGACGGCGGGTGGAGTCCTaGCAGCACCTGGTCCTCTCCAGCAGAGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: AQVVCQGRRVES*QHLVLSSRGQW
Trigger: CCACTGCCCTCTGCTGGAGAGGACCAGGTGCTGCCAGGACTCCACCCGCCGTCCCTGGCAGACAACCTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp GTGGGAGGGGGAGTGGTTCAGGGCCACCCCCTGCCATaGCCGCCTGTAGCTCTGGGCTTAGTTCGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: VGGGVVQGHPLP*PPVALGLVRCP
Trigger: AGGGCAGCGAACTAAGCCCAGAGCTACAGGCGGCCATGGCAGGGGGTGGCCCTGAACCACTCCCCCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 72 bp AGCAGCTGTTCTGGCCGCACGTCCTGGGTGAAGATCTaGTCCCCAGAGCGGCAGTTGGCCAGAGGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: SSCSGRTSWVKI*SPERQLARGRW
Trigger: CCACCGCCCTCTGGCCAACTGCCGCTCTGGGGAGCAGATCTTCACCCAGGACGTGCGGCCAGAACAGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CAA 90 bp GCCACAGCTGAGGGTGACAGCACGTGCCCCACTCCCCAGCCACCCTaGATGGCTCACTGGGATGTAGCTGGGCAGCCACTCGGCGATGCT +
Preference number: 6 (lower is better)
Translates to: ATAEGDSTCPTPQPP*MAHWDVAGQPLGDA
Trigger: AGCATCGCCGAGTGGCTGCCCAGCTACATCCCAGTGAGCCATCAAGGGTGGCTGGGGAGTGGGGCACGTGCTGTCACCCTCAGCTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580021.1
CDS TCA 72 bp TCCCCTCCAGCAGCTGTTCTGGCCGCACGTCCTGGGTaGAGATCTGCTCCCCAGAGCGGCAGTTGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: SPPAAVLAARPG*RSAPQSGSWPE
Trigger: CTCTGGCCAACTGCCGCTCTGGGGAGCAGATCTTCACCCAGGACGTGCGGCCAGAACAGCTGCTGGAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS GCA 72 bp TGCCGGCACTGCGGATGCTGCCCACGCTGCCCTCACTaGCCACACTATTCCTGTCACCTGCTGGGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: CRHCGCCPRCPH*PHYSCHLLGCL
Trigger: CAGACAGCCCAGCAGGTGACAGGAATAGTGTGGGCAGTGAGGGCAGCGTGGGCAGCATCCGCAGTGCCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp AGTGCGGCCTCGTGGAGCGCCGTACCCGTCTTGGTCTaGCGGTTGATCTCGATCCCAGCTCTCAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SAASWSAVPVLV*RLISIPALRSC
Trigger: GCAGCTCCTGAGAGCTGGGATCGAGATCAACCGCCAGACCAAGACGGGTACGGCGCTCCACGAGGCCGCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
CDS CCA 72 bp AGTGGCTGGGCGTTCTCAATCAGGAGGCCAGGGCCATaGCCATTAGTGCCCTCAGAGCTCTGCCCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: SGWAFSIRRPGP*PLVPSELCPLP
Trigger: CGGCAGCGGGCAGAGCTCTGAGGGCACTAATGGCCATGGCCCTGGCCTCCTGATTGAGAACGCCCAGCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp CAGGGCAAAGGACTGGCTGCGAGGAGTCCCCCGAGCTaGGGTTGGGGTCACACTAGGACTGGTCCGGACAAG +
Preference number: 6 (lower is better)
Translates to: QGKGLAARSPPS*GWGHTRTGPDK
Trigger: CTTGTCCGGACCAGTCCTAGTGTGACCCCAACCCCAGCTCGGGGGACTCCTCGCAGCCAGTCCTTTGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp ACTGGCCACTCCGAAGGCCAGCAGTGCGGTCTGCAGTaGCTCTCTCTCCCGGCACTTGGGCCTCCGCTTAAC +
Preference number: 6 (lower is better)
Translates to: TGHSEGQQCGLQ*LSLPALGPPLN
Trigger: GTTAAGCGGAGGCCCAAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGGAGTGGCCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp GCTGGGGCAAAGGCAGTGGACTTCGGCAGGTCACAGTaGGCACTGCTGGAGGGCTCAGTCCAGCATGGCGTC +
Preference number: 6 (lower is better)
Translates to: AGAKAVDFGRSQ*ALLEGSVQHGV
Trigger: GACGCCATGCTGGACTGAGCCCTCCAGCAGTGCCCACTGTGACCTGCCGAAGTCCACTGCCTTTGCCCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CAA 72 bp GAGGGTGACAGCACGTGCCCCACTCCCCAGCCACCCTaGATGGCTCACTGGGATGTAGCTGGGCAGCCACTC +
Preference number: 6 (lower is better)
Translates to: EGDSTCPTPQPP*MAHWDVAGQPL
Trigger: GAGTGGCTGCCCAGCTACATCCCAGTGAGCCATCAAGGGTGGCTGGGGAGTGGGGCACGTGCTGTCACCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580021.1
CDS CCA 72 bp GATGGGCTGGGACTGGGCACACCAATCTTCCCGGCTTaGCTGTGGAACACCAGTGCCCACCCAGAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: DGLGLGTPIFPA*LWNTSAHPESS
Trigger: GCTGCTCTCTGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp AAAGGACTGGCTGCGAGGAGTCCCCCGAGCTGGGGTTaGGGTCACACTAGGACTGGTCCGGACAAGGGCACT +
Preference number: 6 (lower is better)
Translates to: KGLAARSPPSWG*GHTRTGPDKGT
Trigger: AGTGCCCTTGTCCGGACCAGTCCTAGTGTGACCCCAACCCCAGCTCGGGGGACTCCTCGCAGCCAGTCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp GCTTGGTGGAGGCGCTGGGGGTGCCCTCTTGCTCCTTaGTGCCAATGCTCTTCTCTGCGGCTCTCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: AWWRRWGCPLAP*CQCSSLRLSVQ
Trigger: CTGCACTGAGAGCCGCAGAGAAGAGCATTGGCACCAAGGAGCAAGAGGGCACCCCCAGCGCCTCCACCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CAA 72 bp GGATGGGCTGGGACTGGGCACACCAATCTTCCCGGCTaGGCTGTGGAACACCAGTGCCCACCCAGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: GWAGTGHTNLPG*AVEHQCPPREQ
Trigger: CTGCTCTCTGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CAA 90 bp ACAGCTCCAGGATGGGCTGGGACTGGGCACACCAATCTTCCCGGCTaGGCTGTGGAACACCAGTGCCCACCCAGAGAGCAGCCAGCATTC +
Preference number: 6 (lower is better)
Translates to: TAPGWAGTGHTNLPG*AVEHQCPPREQPAF
Trigger: GAATGCTGGCTGCTCTCTGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS GCA 72 bp CTTCGGGCGCTGTTTGATGGTCAGGTTCCCTTCCTCTaGAAACGGCAGCCCTTCCCCAGAGCTGCCCCGAGA +
Preference number: 6 (lower is better)
Translates to: LRALFDGQVPFL*KRQPFPRAAPR
Trigger: TCTCGGGGCAGCTCTGGGGAAGGGCTGCCGTTTGCAGAGGAAGGGAACCTGACCATCAAACAGCGCCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp CTGGGACTGGGCACACCAATCTTCCCGGCTTGGCTGTaGAACACCAGTGCCCACCCAGAGAGCAGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: LGLGTPIFPAWL*NTSAHPESSQH
Trigger: ATGCTGGCTGCTCTCTGGGTGGGCACTGGTGTTCCACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp CCGGTTCCGGGGGAGCAAGTCAGGTGTCCCAGGCAGTaGGCTCCTCGTCAGGTACTGAGGGATACTCCCAAA +
Preference number: 6 (lower is better)
Translates to: PVPGEQVRCPRQ*APRQVLRDTPK
Trigger: TTTGGGAGTATCCCTCAGTACCTGACGAGGAGCCCACTGCCTGGGACACCTGACTTGCTCCCCCGGAACCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp AGCCCCAGTGCACACAGCCACTCCAGCAGGTCCGTCTaGAAGAGCACCGTCCTCAGAACAACTCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: SPSAHSHSSRSV*KSTVLRTTPSQ
Trigger: CTGGCTGGGAGTTGTTCTGAGGACGGTGCTCTTCCAGACGGACCTGCTGGAGTGGCTGTGTGCACTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580021.1
CDS CAA 90 bp GCCCGGACATTGAGAGCAGTGGGATCGTGGAGGTTCCAGAAATCCTaGAGCGCTCGGACCTTCAGGATCCCTGAGGCCTCCCGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: ARTLRAVGSWRFQKS*SARTFRIPEASRSS
Trigger: GCTACTGCGGGAGGCCTCAGGGATCCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACCTCCACGATCCCACTGCTCTCAATGTCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
CDS GCA 72 bp TGCCTGCTTGGGGTCCCTCACCGTGATGACATCCCCTaGCCGGACATTGAGAGCAGTGGGATCGTGGAGGTT +
Preference number: 6 (lower is better)
Translates to: CLLGVPHRDDIP*PDIESSGIVEV
Trigger: AACCTCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACGGTGAGGGACCCCAAGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS CAA 72 bp AGCAGTGCGGTCTGCAGTGGCTCTCTCTCCCGGCACTaGGGCCTCCGCTTAACAGTGTCTGATTCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: SSAVCSGSLSRH*GLRLTVSDSVR
Trigger: CCTCACGGAATCAGACACTGTTAAGCGGAGGCCCAAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CAA 90 bp CCGAAGGCCAGCAGTGCGGTCTGCAGTGGCTCTCTCTCCCGGCACTaGGGCCTCCGCTTAACAGTGTCTGATTCCGTGAGGTTGAAATCG +
Preference number: 6 (lower is better)
Translates to: PKASSAVCSGSLSRH*GLRLTVSDSVRLKS
Trigger: CGATTTCAACCTCACGGAATCAGACACTGTTAAGCGGAGGCCCAAGTGCCGGGAGAGAGAGCCACTGCAGACCGCACTGCTGGCCTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CAA 90 bp GCCTGCTTGGGGTCCCTCACCGTGATGACATCCCCTGCCCGGACATaGAGAGCAGTGGGATCGTGGAGGTTCCAGAAATCCTTGAGCGCT +
Preference number: 6 (lower is better)
Translates to: ACLGSLTVMTSPART*RAVGSWRFQKSLSA
Trigger: AGCGCTCAAGGATTTCTGGAACCTCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACGGTGAGGGACCCCAAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS TCA 72 bp TCAGGTGTCCCAGGCAGTGGGCTCCTCGTCAGGTACTaGGGGATACTCCCAAAGGTGCTCCGTGAACTGCCA +
Preference number: 6 (lower is better)
Translates to: SGVPGSGLLVRY*GILPKVLRELP
Trigger: TGGCAGTTCACGGAGCACCTTTGGGAGTATCCCTCAGTACCTGACGAGGAGCCCACTGCCTGGGACACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp TATCAGCTTGTGGCTTCCGACAGCTCCAGGATGGGCTaGGACTGGGCACACCAATCTTCCCGGCTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: YQLVASDSSRMG*DWAHQSSRLGC
Trigger: ACAGCCAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCTGTCGGAAGCCACAAGCTGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp AGCCCTCCAGCTGGAACTCGCTTAGCCAGTTATGAATaGCCTGCGCGTCCTTCCCCTCCAGCAGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: SPPAGTRLASYE*PARPSPPAAVL
Trigger: CAGAACAGCTGCTGGAGGGGAAGGACGCGCAGGCCATTCATAACTGGCTAAGCGAGTTCCAGCTGGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CCA 72 bp ATGGATATCAGCTTGTGGCTTCCGACAGCTCCAGGATaGGCTGGGACTGGGCACACCAATCTTCCCGGCTTG +
Preference number: 6 (lower is better)
Translates to: MDISLWLPTAPG*AGTGHTNLPGL
Trigger: CAAGCCGGGAAGATTGGTGTGCCCAGTCCCAGCCCATCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp ACATCCCCTGCCCGGACATTGAGAGCAGTGGGATCGTaGAGGTTCCAGAAATCCTTGAGCGCTCGGACCTTC +
Preference number: 6 (lower is better)
Translates to: TSPARTLRAVGS*RFQKSLSARTF
Trigger: GAAGGTCCGAGCGCTCAAGGATTTCTGGAACCTCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
CDS CCA 72 bp CCCAAAGCAGCGTGGTGGAGGGCAGAGAATCTGATGTaGGAGGACACAAAGTTAGGGGTGTTGGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: PKAAWWRAENLM*EDTKLGVLVGS
Trigger: GCTGCCCACCAACACCCCTAACTTTGTGTCCTCCCACATCAGATTCTCTGCCCTCCACCACGCTGCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583258.5
CDS CAA 72 bp TTGAGAGCAGTGGGATCGTGGAGGTTCCAGAAATCCTaGAGCGCTCGGACCTTCAGGATCCCTGAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LRAVGSWRFQKS*SARTFRIPEAS
Trigger: GGAGGCCTCAGGGATCCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACCTCCACGATCCCACTGCTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000433559.6
ENST00000581870.1
CDS CAA 90 bp TCGGGATGCTGTTCTAGCACCGTGATGACATCCCCTGCCCGGACATaGAGAGCAGTGGGATCGTGGAGGTTCCAGAAATCCTTGAGCGCT +
Preference number: 6 (lower is better)
Translates to: SGCCSSTVMTSPART*RAVGSWRFQKSLSA
Trigger: AGCGCTCAAGGATTTCTGGAACCTCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACGGTGCTAGAACAGCATCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000433559.6
CDS CAA 90 bp TTGACCTTCGCCACCAGTTTCTGCACACCGGTCACATCTCCATTCTaGACGGCGAGGATCAGGTCCTGTTCACGACCCATACTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: LTFATSFCTPVTSPF*TARIRSCSRPILAP
Trigger: AGGAGCCAGTATGGGTCGTGAACAGGACCTGATCCTCGCCGTCAAGAATGGAGATGTGACCGGTGTGCAGAAACTGGTGGCGAAGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000581870.1
CDS TCA 72 bp CCACCAGTTTCTGCACACCGGTCACATCTCCATTCTTaGCGGCGAGGATCAGGTCCTGTTCACGACCCATAC +
Preference number: 6 (lower is better)
Translates to: PPVSAHRSHLHS*RRGSGPVHDPY
Trigger: GTATGGGTCGTGAACAGGACCTGATCCTCGCCGTCAAGAATGGAGATGTGACCGGTGTGCAGAAACTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp GAAGGCTACATGGAAATCTGGATGGATATCAGCTTGTaGCTTCCGACAGCTCCAGGATGGGCTGGGACTGGG +
Preference number: 6 (lower is better)
Translates to: EGYMEIWMDISL*LPTAPGWAGTG
Trigger: CCCAGTCCCAGCCCATCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCAGATTTCCATGTAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CAA 72 bp GCCACCAGTTTCTGCACACCGGTCACATCTCCATTCTaGACGGCGAGGATCAGGTCCTGTTCACGACCCATA +
Preference number: 6 (lower is better)
Translates to: ATSFCTPVTSPF*TARIRSCSRPI
Trigger: TATGGGTCGTGAACAGGACCTGATCCTCGCCGTCAAGAATGGAGATGTGACCGGTGTGCAGAAACTGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS GCA 72 bp TTTGTCTTTGTGGCCTTGACCTTCGCCACCAGTTTCTaGACACCGGTCACATCTCCATTCTTGACGGCGAGG +
Preference number: 6 (lower is better)
Translates to: FVFVALTFATSF*TPVTSPFLTAR
Trigger: CCTCGCCGTCAAGAATGGAGATGTGACCGGTGTGCAGAAACTGGTGGCGAAGGTCAAGGCCACAAAGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321617.8
ENST00000581870.1
CDS CAA 72 bp GGTGAAGGCTACATGGAAATCTGGATGGATATCAGCTaGTGGCTTCCGACAGCTCCAGGATGGGCTGGGACT +
Preference number: 6 (lower is better)
Translates to: GEGYMEIWMDIS*WLPTAPGWAGT
Trigger: AGTCCCAGCCCATCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCAGATTTCCATGTAGCCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CCA 72 bp ATCTTTGAGGGGGTGAAGGCTACATGGAAATCTGGATaGATATCAGCTTGTGGCTTCCGACAGCTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: IFEGVKATWKSG*ISACGFRQLQD
Trigger: ATCCTGGAGCTGTCGGAAGCCACAAGCTGATATCCATCCAGATTTCCATGTAGCCTTCACCCCCTCAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CAA 90 bp GAACGTGGTAACATAGCAGGTGCCCAAATAAGTAACAGCAATCATTaGTATTTGCAAAGGAATGCCTGCTTGGGGTCCCTCACCGTGATG +
Preference number: 6 (lower is better)
Translates to: ERGNIAGAQISNSNH*YLQRNACLGSLTVM
Trigger: CATCACGGTGAGGGACCCCAAGCAGGCATTCCTTTGCAAATACAAATGATTGCTGTTACTTATTTGGGCACCTGCTATGTTACCACGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1
CDS CCA 72 bp GAAGGAAAGCTAATCTTTGAGGGGGTGAAGGCTACATaGAAATCTGGATGGATATCAGCTTGTGGCTTCCGA +
Preference number: 6 (lower is better)
Translates to: EGKLIFEGVKAT*KSGWISACGFR
Trigger: TCGGAAGCCACAAGCTGATATCCATCCAGATTTCCATGTAGCCTTCACCCCCTCAAAGATTAGCTTTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321617.8
ENST00000580075.1
ENST00000581870.1
CDS CAA 72 bp AACATAGCAGGTGCCCAAATAAGTAACAGCAATCATTaGTATTTGCAAAGGAATGCCTGCTTGGGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: NIAGAQISNSNH*YLQRNACLGSL
Trigger: GAGGGACCCCAAGCAGGCATTCCTTTGCAAATACAAATGATTGCTGTTACTTATTTGGGCACCTGCTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581870.1