RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASKIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167971

Ensembl transcript IDs: ENST00000343516.8, ENST00000562055.1, ENST00000564289.1

Found 393 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCGGCCCGGGTCCAGGGGCCGGAGTTGTGCTTCTGCAGGGCCCTaGCCGGCCGCTCGCGCCGCGCCCAGACGCGCCCATCCTGAGGTA +
Preference number: 1 (lower is better)
Translates to: PRPGSRGRSCASAGP*PAARAAPRRAHPEV
Trigger: TACCTCAGGATGGGCGCGTCTGGGCGCGGCGCGAGCGGCCGGGCAGGGCCCTGCAGAAGCACAACTCCGGCCCCTGGACCCGGGCCGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 90 bp GGCCCTGACCTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTaGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGGCCCGGGCCTG +
Preference number: 1 (lower is better)
Translates to: GPDLGPLSLVLRPSG*PGVPMGSSVLGPGL
Trigger: CAGGCCCGGGCCCAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAGGTCAGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 90 bp GCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTaGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAA +
Preference number: 1 (lower is better)
Translates to: AATLTHPHSPNPPAP*DAATPGGGHGRREQ
Trigger: TTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTaGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCT +
Preference number: 1 (lower is better)
Translates to: PGEGARHTLRGAASP*PGLLHALLPRGCHA
Trigger: AGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR GCA 90 bp GGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTaGTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACACACCCA +
Preference number: 1 (lower is better)
Translates to: GPGTPSEELQARGLA*YMPCFHVAATLTHP
Trigger: TGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR TCA 90 bp GTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTaGCACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG +
Preference number: 1 (lower is better)
Translates to: VAWPATCPASTWLPR*HTHIHQTHPRPGTQ
Trigger: CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR GCA 90 bp GCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTaGCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTG +
Preference number: 1 (lower is better)
Translates to: ASPWPGLLHALLPRG*HADTPTFTKPTRAL
Trigger: CAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTaGGGCGCAGAGAACTTAGGAGAGAAGCACGGAGGAGCCCCCGGC +
Preference number: 1 (lower is better)
Translates to: GGGHGRREQGTTSSS*GAENLGEKHGGAPG
Trigger: GCCGGGGGCTCCTCCGTGCTTCTCTCCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR GCA 90 bp CCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTaGTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAAC +
Preference number: 1 (lower is better)
Translates to: PSEELQARGLACYMP*FHVAATLTHPHSPN
Trigger: GTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 90 bp TGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTaGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTTT +
Preference number: 1 (lower is better)
Translates to: WGLHSGRRKDRRQTA*ASNSFCPELDFVSF
Trigger: AAAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR TCA 90 bp GGAAAAGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATaGGCAGAAGCGTCCGTGGGAACTCCACTGGGGTGGATGGGCTGC +
Preference number: 1 (lower is better)
Translates to: GKGRARMTTQHSLGP*AEASVGTPLGWMGC
Trigger: GCAGCCCATCCACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR GCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCCGCGGGCGCAGGGTCTaGCTAGAGCCCTTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: WDAATPGGGHGRREQGTTRGRRV*LEPLEP
Trigger: GGGCTCCAAGGGCTCTAGGCAGACCCTGCGCCCGCG...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGGGGAGCAGCAGGTaGGGAGGACCCGCGGGCGCA +
Preference number: 2 (lower is better)
Translates to: ELQARGLACYMPCFHVAATGSSR*GGPAGA
Trigger: TGCGCCCGCGGGTCCTCCCCACCTGCTGCTCCCCGT...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCCGGAGTTGTGCTTCTaGAGGGCCCTGCCCGGCCGC +
Preference number: 2 (lower is better)
Translates to: ELQARGLACYMPCFHVAAPELCF*RALPGR
Trigger: GCGGCCGGGCAGGGCCCTGCAGAAGCACAACTCCGG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR GCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCACAGGGGCCGGAGTTGTaGTTCTGCAGGGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAQGPEL*FCRALP
Trigger: GGGCAGGGCCCTGCAGAAGCACAACTCCGGCCCCTG...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR TCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTCAGACGCGCCCATCCTaGGGTATAGGTCAGTGTGCG +
Preference number: 2 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFQTRPS*GIGQCA
Trigger: CGCACACTGACCTATACCTCAGGATGGGCGCGTCTG...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGGCCGGGCGTCCCGATaGGCAGTTCTGTGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNGRASR*AVLCWA
Trigger: GGCCCAGCACAGAACTGCCCATCGGGACGCCCGGCC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR CAA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCGTCTGCCTAGAGCCCTaGGAGCCCCCGGCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: ELQARGLACYMPCFHVAAVCLEP*EPPARR
Trigger: CCGCCTGGCCGGGGGCTCCAAGGGCTCTAGGCAGAC...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 72 bp CTGACACACCCACATTCACCAAACCCACCCGCGCCCTaGGACGCAGCCACGCCAGGAGGAGGACACGGCCGC +
Preference number: 3 (lower is better)
Translates to: LTHPHSPNPPAP*DAATPGGGHGR
Trigger: GCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 72 bp GGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTaGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGC +
Preference number: 3 (lower is better)
Translates to: GARHTLRGAASP*PGLLHALLPRG
Trigger: GCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR GCA 72 bp ACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTaGTACATGCCCTGCTTCCACGTGGCTGCCACGCTG +
Preference number: 3 (lower is better)
Translates to: TPSEELQARGLA*YMPCFHVAATL
Trigger: CAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 72 bp CAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTaGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: QAHPQRSCKPVA*PATCPASTWLP
Trigger: TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR GCA 72 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTaGTTCCACGTGGCTGCCACGCTGACACACCCACAT +
Preference number: 3 (lower is better)
Translates to: ELQARGLACYMP*FHVAATLTHPH
Trigger: ATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR TCA 72 bp CCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTaGCACACCCACATTCACCAAACCCACCCGCGCCCT +
Preference number: 3 (lower is better)
Translates to: PATCPASTWLPR*HTHIHQTHPRP
Trigger: AGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 72 bp TTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTaGGGTGGATGGGCTGCCTGCACAGCCCCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: LDHEQKRPWELH*GGWAACTAPGE
Trigger: CTCTCCAGGGGCTGTGCAGGCAGCCCATCCACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR CAA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCACAACCTCGAGTTCTaGGGGCGCAGAGAACTTAGG +
Preference number: 3 (lower is better)
Translates to: RHTLRGAASPWPGLLHALHNLEF*GRRELR
Trigger: CCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTG...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR GCA 72 bp TGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTaGCACGCTGACACACCCACATTCACCAAACCCACC +
Preference number: 3 (lower is better)
Translates to: WPGLLHALLPRG*HADTPTFTKPT
Trigger: GGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR-3UTR CAA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGTCCAGGGGCCGGAGTaGTGCTTCTGCAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNVQGPE*CFCRAL
Trigger: CAGGGCCCTGCAGAAGCACAACTCCGGCCCCTGGAC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 72 bp CACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTaGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTC +
Preference number: 3 (lower is better)
Translates to: HSGRRKDRRQTA*ASNSFCPELDF
Trigger: GAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 72 bp CACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTaGGGCGCAGAGAACTTAGGAGAGAAGCACGGAGGA +
Preference number: 3 (lower is better)
Translates to: HGRREQGTTSSS*GAENLGEKHGG
Trigger: TCCTCCGTGCTTCTCTCCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR TCA 72 bp AGGGCGAGAATGACCACACAACACAGCCTTGGACCATaGGCAGAAGCGTCCGTGGGAACTCCACTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: RARMTTQHSLGP*AEASVGTPLGW
Trigger: CCACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CCA 72 bp AAAAGGGAGGGCGAGAATGACCACACAACACAGCCTTaGACCATGAGCAGAAGCGTCCGTGGGAACTCCACT +
Preference number: 3 (lower is better)
Translates to: KREGENDHTTQP*TMSRSVRGNST
Trigger: AGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGGGACAGTGGCGGTGGTaGCTCAGGCCCGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPGQWRW*LRPGLP
Trigger: CGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCC...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGGCAGGGAGCGGGGTaGCATGGGGCGCTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPRQGAG*HGALCR
Trigger: CCGACAGAGCGCCCCATGTCACCCCGCTCCCTGCCT...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCGGACCCCGAGGCCGCTaGCGGCCAGTGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGGPRGR*RPVPSS
Trigger: GGAGGATGGCACTGGCCGGCAGCGGCCTCGGGGTCC...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGCGCGGGCGCAGGGTCTaGCTAGAGCCCTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMRGRRV*LEPLEP
Trigger: GGGCTCCAAGGGCTCTAGGCAGACCCTGCGCCCGCG...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGAGGCCAGCACGGTaGCCACCCGGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGLRPAR*PPGPAL
Trigger: CAGAGCCGGGCCGGGTGGCCACCGTGCTGGCCTCAG...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGGCGGTGGCGTGCCGTaGGCGCGCTTCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLGGGVP*ARFTSG
Trigger: CCCAGAGGTGAAGCGCGCCCACGGCACGCCACCGCC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCACGGGGAGCAGCAGGTaGGGAGGACCCGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGTGSSR*GGPAGA
Trigger: TGCGCCCGCGGGTCCTCCCCACCTGCTGCTCCCCGT...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGGGGAACCTGCTCGCTTaGCAATGGCCTCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPGNLLA*QWPRPG
Trigger: CCCTGGGCGAGGCCATTGTCAAGCGAGCAGGTTCCC...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCGGTGCGTCGGTGACTaGGGCAGGGAGCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGRCVGD*GRERGD
Trigger: GTCACCCCGCTCCCTGCCTCAGTCACCGACGCACCG...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAGCCGCGGTGCGTCGGTaGCTGAGGCAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARGLACYMPCFHVAATLTAAVRR*LRQGAG
Trigger: CCCCGCTCCCTGCCTCAGTCACCGACGCACCGCGGC...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCTGCGGGCGCCCTCACTaGGTGGCTGCGGCCCACGCG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAACGRPH*VAAAHA
Trigger: CGCGTGGGCCGCAGCCACTCAGTGAGGGCGCCCGCA...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGTGCTGGGCCGCCAGGTaGAGGGGGATGTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMCWAAR*RGMWPS
Trigger: TGAGGGCCACATCCCCCTGCACCTGGCGGCCCAGCA...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGGGTGCAAAGGGCTGGTaGCGTTGGGGTCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPGAKGW*RWGRWR
Trigger: ACGCCACCGACCCCAACGGCACCAGCCCTTTGCACC...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGCCCAGGCTGGAGTCCTaGCGCGTGGTGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLPRLES*RVVALG
Trigger: CCCGAGGGCCACCACGCGGCAGGACTCCAGCCTGGG...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCCGGAGTTGTGCTTCTaGAGGGCCCTGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGPELCF*RALPGR
Trigger: GCGGCCGGGCAGGGCCCTGCAGAAGCACAACTCCGG...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGCCCTGTCCCTTGTGCTaGGCCCGAGCGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLPCPLC*ARAAGR
Trigger: CCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGG...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGTGGATGGGCTGCCTaGACAGCCCCTGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMGGWAA*TAPGEG
Trigger: CCCCTCTCCAGGGGCTGTGCAGGCAGCCCATCCACC...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGGCCCTCTTGATGCTGTaGCCGTGGCGGCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLALLML*PWRPGR
Trigger: CCGGCCCGGCCGCCACGGCCACAGCATCAAGAGGGC...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCGGGAGCGGGGTGACATaGGGCGCTCTGTCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGGSGVT*GALSAA
Trigger: TGCCGCCGACAGAGCGCCCCATGTCACCCCGCTCCC...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCGGCCGGGCGTCCCGATaGGCAGTTCTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGGRASR*AVLCWA
Trigger: GGCCCAGCACAGAACTGCCCATCGGGACGCCCGGCC...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGCCTGCAGCTCGTCACTaGGCTCGCTGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPPAARH*ARCPGR
Trigger: CCTTCCAGGACAGCGAGCTCAGTGACGAGCTGCAGG...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGCTCTGCAGCAGCCTCTaGGCGGTCCCTACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMLCSSL*AVPTSS
Trigger: GGAGGACGTAGGGACCGCGCAGAGGCTGCTGCAGAG...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGCCCTCACTGAGTGGCTaGGGCCCACGCGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLPSLSG*GPRAAG
Trigger: TCCAGCGGCGCGTGGGCCGCAGCCACTCAGTGAGGG...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCGTGAAGGGCCGGCGCTaGCCGAAGGCAGCCCCGCGA +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAVKGRR*PKAAPR
Trigger: TCGCGGGGCTGCCTTCGGGCAGCGCCGGCCCTTCAC...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCTGCCGTTGGGGTCGGTaGCGTCTCCCGGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCCRWGR*RLPAGA
Trigger: AGCCCCGGCCGGGAGACGCCACCGACCCCAACGGCA...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCAGCCTTCCGGAGGCTTaGCGGGGCTGTCCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAASLPEA*RGCPPG
Trigger: GCCCGGGGGACAGCCCCGCCAAGCCTCCGGAAGGCT...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCTGGCAGGGCGGGGAGTaGGGTGGCCCTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAWQGGE*GGPQEA
Trigger: GGCCTCCTGAGGGCCACCCCACTCCCCGCCCTGCCA...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGGTGTGGGCGAGCCCTaGAGCTTGGGCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLGVGEP*SLGTGC
Trigger: GCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGCTGGGGCTGGACCATaGGGTCCCCCAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCAGAGP*GPPRAW
Trigger: CCAGGCCCTTGGGGGACCTCATGGTCCAGCCCCAGC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCCCGGATGCGCCTCTTaGGTGTGGCGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGPGCAS*VWRWLP
Trigger: TGGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGG...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCGCAGCTCCTGCGAGCTaGTCATGTGCCGTGCCCGAC +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGAAPAS*SCAVPD
Trigger: GTCGGGCACGGCACATGAGCAGCTCGCAGGAGCTGC...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCTTCGAGACATGGGGCTaGTGGGCCCAGGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGFETWG*WAQGAH
Trigger: ATGGGCCCCCTGGGCCCAGCAGCCCCATGTCTCGAA...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCGGCAATGGGGGTAGGTaGGCCAGGTCGGTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAGNGGR*ARSVGG
Trigger: CCCGCCCACCGACCTGGCGCACCTACCCCCATTGCC...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGCCCGTGGCCTGGCCTaGTACATGCCCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLARGLA*YMPCFH
Trigger: GTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAAGCAGGAAGGGGCCCTaGACGCCGGGACGCCACCTC +
Preference number: 4 (lower is better)
Translates to: ARGLACYMPCFHVAATLTSRKGP*TPGRHL
Trigger: GAGGTGGCGTCCCGGCGTGCAGGGCCCCTTCCTGCT...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCTGGAACCCAGGAGCTTaGCCTTCCCGGGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCWNPGA*PSRAAA
Trigger: GGCCGCGGCCCGGGAAGGCCAAGCTCCTGGGTTCCA...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCCTGCTGAGGAGCAGCTaGACCACCCCAACGCGGCCG +
Preference number: 4 (lower is better)
Translates to: WDAATPGGGHGRREQGTTLLRSS*TTPTRP
Trigger: CGGCCGCGTTGGGGTGGTCCAGCTGCTCCTCAGCAG...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCTGGAGGGCTTCTCAGTaGTGGGCCCCACCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGWRASQ*WAPPQP
Trigger: CGGCTGAGGTGGGGCCCACCACTGAGAAGCCCTCCA...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCAGTCCTGCCGCGTGGTaGCCCTCGGGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAASPAAW*PSGWVA
Trigger: TGCCACCCACCCCGAGGGCCACCACGCGGCAGGACT...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCTGGAGTCCTGCCGCGTaGTGGCCCTCGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCWSPAA*WPSGWV
Trigger: CACCCACCCCGAGGGCCACCACGCGGCAGGACTCCA...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCCCGACCACCCAGGCTaGAGTCCTGCCGCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAPDHPG*SPAAWW
Trigger: CCACCACGCGGCAGGACTCCAGCCTGGGTGGTCGGG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGTGTGGGCCCGCTTCTTaGGCCGCCCCGGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALCGPAS*AAPAPR
Trigger: ACGCGGAGCCGGGGCGGCCCAAGAAGCGGGCCCACA...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCACCCGCCTCGCCCTTaGAGGGACCCCGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALHPPRP*RDPEAA
Trigger: AGCGGCCTCGGGGTCCCTCCAAGGGCGAGGCGGGTG...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGCAGCGGCACCTTCTTaGAGGTGGGTGTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLAAAPS*RWVWAS
Trigger: GCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGCATGGCATCCAGCTaGTCGGCCAGGTCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPSMASS*SARSSN
Trigger: GTTCGACGACCTGGCCGACCAGCTGGATGCCATGCT...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGTGGCCTGGGACGTGGTaGACTGGTGCACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMWPGTW*TGARCP
Trigger: TGGACATCGTGCACCAGTTCACCACGTCCCAGGCCA...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCGGTGCCCCAGCTTGGTaGTGCCGATCTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGGAPAW*CRSPAG
Trigger: ACCTGCAGGAGATCGGCATCACCAAGCTGGGGCACC...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCCCTTGGGCCTGCGCTTaGCCGTGTCAGACTCGGTCA +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGPWACA*PCQTRS
Trigger: TGACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGG...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTGCCCCGCGACCGCCTTaGCGGGCTTGGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFAPRPP*RAWALW
Trigger: CCACAGCGCCCAAGCCCGTCAAGGCGGTCGCGGGGC...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGCAGACGCGCCCATCCTaGGGTATAGGTCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMQTRPS*GIGQCA
Trigger: CGCACACTGACCTATACCTCAGGATGGGCGCGTCTG...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCAGAGCGCAGCCTCGTaGAGGGCCGTGCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCQSAAS*RAVPDL
Trigger: CAAGTCCGGCACGGCCCTGCACGAGGCTGCGCTCTG...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCTTGGTCGCCCGGACCTaGAGGGCCGCTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAALVART*RAAEAS
Trigger: AGAGGCCTCAGCGGCCCTGCAGGTCCGGGCGACCAA...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGCAGGCTTGGTTCAGTaGCTGCTCGGGAACCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMAGLVQ*LLGNLL
Trigger: GAGCAGGTTCCCGAGCAGGCACTGAACCAAGCCTGC...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAGTCGGCGGCAGCAGCTaGGGGGTGGGCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: ARGLACYMPCFHVAATLTVGGSS*GVGFTL
Trigger: CAAGGTGAAGCCCACCCCGCAGCTGCTGCCGCCGAC...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGCCAGCATGGCCGCGATaGTCTTCACACTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLPAWPR*SSHCRH
Trigger: GTGCCGGCAGTGTGAAGAGCATCGCGGCCATGCTGG...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGCCTGCTACATGCCCTaGTTCCACGTGGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLACYMP*FHVAAT
Trigger: CGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCCCGTCCGGTTGTCATaGATGCAGCCCTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGPVRLS*MQPFHR
Trigger: CCGGTGGAAGGGCTGCATCCATGACAACCGGACGGG...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCTCCCTGGGGCAGGCTTaGTTCAGTGCCTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGSLGQA*FSACSG
Trigger: TCCCGAGCAGGCACTGAACCAAGCCTGCCCCAGGGA...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCTGGGCCACTGGAGGCTaGGACCGGGCCACACCTGCA +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAWATGG*DRATPA
Trigger: TGCAGGTGTGGCCCGGTCCCAGCCTCCAGTGGCCCA...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCGAGACATGGGGCTGCTaGGCCCAGGGGGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAETWGC*AQGAHL
Trigger: GAGATGGGCCCCCTGGGCCCAGCAGCCCCATGTCTC...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCGAAGTGGCTAGTGCCTaGTGGGAGGACCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGEVASA*WEDLPW
Trigger: CCACGGCAGGTCCTCCCACCAGGCACTAGCCACTTC...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCGGTCCCCCAAGGGCCTaGGGAGAGCCTGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAGPPRA*GEPGRV
Trigger: AACCCGACCAGGCTCTCCCCAGGCCCTTGGGGGACC...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCGGCCCCCACCCCCAATaGAGGACAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: WDAATPGGGHGRREQGTTGPHPQ*RTAPAW
Trigger: CCATGCTGGAGCTGTCCTCCATTGGGGGTGGGGGCC...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGGGAGCTGCAAGCCCGTaGCCTGGCCTGCTACATGCC +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLGAASP*PGLLHA
Trigger: GGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCC...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCAGGGAAACACGGGGTaGGACAGCAGGAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCQGNTG*DSRKGP
Trigger: GGGCCCCTTCCTGCTGTCTCACCCCGTGTTTCCCTG...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCTTCAGGGCCGCATGGTaGAGAGCCGAGAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGFRAAW*RAEKPS
Trigger: GGATGGCTTCTCGGCTCTGCACCATGCGGCCCTGAA...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGGTGGCCGTTTTTAGCTaGGAGGTGCAAAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPVAVFS*EVQRAG
Trigger: ACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCAC...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGCCTCTCGCAACAGCTaGTTGATCTCCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLASRNS*LISLLA
Trigger: GGCCAGCAGGGAGATCAAGCAGCTGTTGCGAGAGGC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGCGGCCATCCGGATGCTaGTCGAGGACTGTGATGATG +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMRPSGC*SRTVMM
Trigger: CATCATCACAGTCCTCGAGCAGCATCCGGATGGCCG...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGCTGGGAAAGCACCGTTaGCAGGAGCTTGACGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMLGKHR*QELDAF
Trigger: GAAGGCGTCAAGCTCCTGGCAACGGTGCTTTCCCAG...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCGGACCGGGCCACACCTaGAGAGCCTTCCGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAGPGHT*RAFRRL
Trigger: AAGCCTCCGGAAGGCTCTGCAGGTGTGGCCCGGTCC...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCTGCGAGCTGCTCATGTaGCGTGCCCGACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAACELLM*RARPPR
Trigger: CCTGGGTGGTCGGGCACGGCACATGAGCAGCTCGCA...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCTCTCCCAGCAGCTCCTaGGAGCTGCTCATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGSPSSS*ELLMCR
Trigger: ACGGCACATGAGCAGCTCGCAGGAGCTGCTGGGAGA...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCACCTGGTGGGAGGACCTaGCGTGGCTTGCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAPGGRT*RGLPGT
Trigger: CGTGCCTGGCAAGCCACGGCAGGTCCTCCCACCAGG...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGTCGGCGGCGCACGGTaGCAGTGCCATTATGGTACA +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLVGGAR*QCHYGT
Trigger: TGTACCATAATGGCACTGGCACCGTGCGCCGCCGAC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCCCTGCGCGTCCTCCTaGCGGATCTTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAPCASS*RIFSST
Trigger: GGTGGAGGAGAAGATCCGGCAGGAGGACGCGCAGGG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGCCAGGATGCTGCCAGTaGTCTTTTCCGCCGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLPGCCQ*SFPPPS
Trigger: ACTCGGCGGCGGAAAAGAGCACTGGCAGCATCCTGG...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCACCCTCAGAGGAGCTaGAAGCCCGTGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCHPQRS*KPVAWP
Trigger: AGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTG...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACACAGCCGGGCCAGTCATaGCAGCCTGCAGCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: ARGLACYMPCFHVAATLTQPGQS*QPAARH
Trigger: GTGACGAGCTGCAGGCTGCCATGACTGGCCCGGCTG...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAAGGGCTTCTCAGTGGTaGGCCCCACCTCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGARASQW*APPQPG
Trigger: GCCCGGCTGAGGTGGGGCCCACCACTGAGAAGCCCT...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGTCCAGGAGGTACTCCTaGCTTCGAGACATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMSRRYS*LRDMGL
Trigger: CAGCCCCATGTCTCGAAGCCAGGAGTACCTCCTGGA...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCTGCCGGCCAGGTCACTaGCCCGCCGGCACTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRCRPGH*PAGTVP
Trigger: GGGCACAGTGCCGGCGGGCCAGTGACCTGGCCGGCA...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGAGAGACAGGCGGCTTaGCCGGCTTCCGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAERQAA*PASGLR
Trigger: GCGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTC...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGCGTCAGGACGGGCTTaGGAGAGACAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCASGRA*ERQAAW
Trigger: CCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCTCCACTGGGGTGGATaGGCTGCCTGCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCLHWGG*AACTAP
Trigger: AGGGGCTGTGCAGGCAGCCCATCCACCCCAGTGGAG...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCCGTGGGAACTCCACTaGGGTGGATGGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAPWELH*GGWAAC
Trigger: GCAGGCAGCCCATCCACCCCAGTGGAGTTCCCACGG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGTCCTCACGTGGGCATTaGTCCCGCTATCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLSSRGH*SRYPAA
Trigger: TGCTGCTGGATAGCGGGATCAATGCCCACGTGAGGA...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCACGGGAGTCATGCGGCTaGTGGTGGGCAGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGARESCG*WWAGRS
Trigger: GCTACGACCTGCCCACCATCAGCCGCATGACTCCCG...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGGATGCTTAGGCCGCTaGTCTCTGCCGCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLGCLGR*SLPRSS
Trigger: AGAAGATCGCGGCAGAGATCAGCGGCCTAAGCATCC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGTTTTTAGCTGCGAGGTaGAAAGGGCTGGTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: KPTRALGRSHARRRTRPPFLAAR*KGLVPL
Trigger: CAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAA...CGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCGCTTGGTTCAGTGCCTaGTCGGGAACCTGCTCGCTT +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGAWFSA*SGTCSL
Trigger: AAGCGAGCAGGTTCCCGAGCAGGCACTGAACCAAGC...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGGCTGCTCATGTGCCGTaGCCGACCACCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALAAHVP*PTTQAG
Trigger: TCCAGCCTGGGTGGTCGGGCACGGCACATGAGCAGC...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCGGCGCACGGTGCCAGTaGCATTATGGTACACGGACA +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGGARCQ*HYGTRT
Trigger: TGTCCGTGTACCATAATGGCACTGGCACCGTGCGCC...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCACACGGGCGGTGGCGTaGCGTGGGCGCGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRTRAVA*RGRASP
Trigger: AGGTGAAGCGCGCCCACGGCACGCCACCGCCCGTGT...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCTTCTCCTCCACCGCCTaGAGCGCCGCGGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRFSSTA*SAAARH
Trigger: GTGCCTGGCCGCGGCGCTGCAGGCGGTGGAGGAGAA...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGCCTGGCCTGCTACATaGCCTGCTTCCACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCAWPAT*PASTWL
Trigger: CAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCACTGGGGTGGATGGGCTaGCTGCACAGCCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGALGWMG*LHSPWR
Trigger: TCTCCAGGGGCTGTGCAGGCAGCCCATCCACCCCAG...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGATGTCCACAGCGGCCTaGGCCTCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALMSTAA*ASSSRL
Trigger: CAGCCTGCTGCTGGAGGCCCAGGCCGCTGTGGACAT...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGAGGTGCAGGGGGATGTaGCCCTCATCAGACGGGATG +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLRCRGM*PSSDGM
Trigger: CATCCCGTCTGATGAGGGCCACATCCCCCTGCACCT...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGGTGCCGGACTTGGTCTaGCGGTTAATGTCGATGCCG +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLVPDLV*RLMSMP
Trigger: CGGCATCGACATTAACCGCCAGACCAAGTCCGGCAC...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCTGGGACGTGGTGAACTaGTGCACGATGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGWDVVN*CTMSRA
Trigger: AGCCCTGGACATCGTGCACCAGTTCACCACGTCCCA...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCTTGCCCTCCGATGCTaGCTCCAGCTTCTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAALALRC*LQLLGR
Trigger: CCGCCCAAGAAGCTGGAGCCAGCATCGGAGGGCAAG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCAACGCGGTGAGCCACTaGCTCACGGCCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCNAVSH*LTASEL
Trigger: GAGCTCTGAGGCCGTGAGCCAGTGGCTCACCGCGTT...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGGCCGTAGCTGGGGCTaGACCATGAGGTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAGRSWG*TMRSPK
Trigger: CTTGGGGGACCTCATGGTCCAGCCCCAGCTACGGCC...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCACCTTGGCCGTAGCTaGGGCTGGACCATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCHLGRS*GWTMRS
Trigger: GGACCTCATGGTCCAGCCCCAGCTACGGCCAAGGTG...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGGGGCAGGCACAGTGTaGGCACAGCCGTCGGCACGG +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRGAGTV*AQPSAR
Trigger: CCGTGCCGACGGCTGTGCCCACACTGTGCCTGCCCC...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTCACGGACAGTGGCGGTaGTGGCTCAGGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFHGQWR*WLRPGL
Trigger: GAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTG...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCATGGTACACGGACAGTaGCGGTGGTGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCMVHGQ*RWWLRP
Trigger: GGGCCTGAGCCACCACCGCCACTGTCCGTGTACCAT...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGCGAGCCCTGGAGCTTaGGCACAGGCTGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAASPGA*AQAASG
Trigger: TCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGC...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTGGCGCGCTTCACCTCTaGGCTGCCAGGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFGALHL*AARAWQ
Trigger: CTGCCAGGCCCTGGCAGCCCAGAGGTGAAGCGCGCC...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACATGCAAGCCCGTGGCCTaGCCTGCTACATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ARGLACYMPCFHVAATLTCKPVA*PATCPA
Trigger: AGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCA...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGCCTCCAGCAGCAGGCTaGTCAATTCCGTGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLPPAAG*SIPCCR
Trigger: ACGGCAACACGGAATTGATCAGCCTGCTGCTGGAGG...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGACCTGCAGGGCCGCTaGGGCCTCTCGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRDLQGR*GLSQQL
Trigger: CAGCTGTTGCGAGAGGCCTCAGCGGCCCTGCAGGTC...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGTCCGCCTTCACCGCCTaGACCAGCTCCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALSAFTA*TSSCSF
Trigger: GAAGGAGCAGGAGCTGGTGCAGGCGGTGAAGGCGGA...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCACCGGCCATCCGGATaGTGCTCGAGGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAHRPSG*CSRTVM
Trigger: CATCACAGTCCTCGAGCAGCATCCGGATGGCCGGTG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCAGCCCACCCGGTCATTaGCCGTCCGGTTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCSPPGH*PSGCHG
Trigger: TCCATGACAACCGGACGGGCAATGACCGGGTGGGCT...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGCTCTTGCCCTCCGATaGTGGCTCCAGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCALALR*WLQLLG
Trigger: CCCAAGAAGCTGGAGCCAGCATCGGAGGGCAAGAGC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGAGCTTGGGCACAGGCTaGGTCAGGACGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALSLGTG*VRTGLG
Trigger: TCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCT...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTCAGGGGCCGGAGTTGTaGTTCTGCAGGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFQGPEL*FCRALP
Trigger: GGGCAGGGCCCTGCAGAAGCACAACTCCGGCCCCTG...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCAAGGGCTGGTGCCGTTaGGGTCGGTGGCGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRKGWCR*GRWRLP
Trigger: CGGGAGACGCCACCGACCCCAACGGCACCAGCCCTT...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCTGTTGCAATAATCCTTaGTCGCCCGGACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: APRPDAPILRYRSVCGEGCCNNP*SPGPAG
Trigger: CCCTGCAGGTCCGGGCGACCAAGGATTATTGCAACA...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGGGGGCGGCGACTCGATaGCCATCACTTCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLGAATR*PSLQET
Trigger: AGTCTCTTGAAGTGATGGCCATCGAGTCGCCGCCCC...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGGTGGCTAGTGCCTGGTaGGAGGACCTGCCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALVASAW*EDLPWL
Trigger: AAGCCACGGCAGGTCCTCCCACCAGGCACTAGCCAC...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCCGCACGGCAAAGGACTaGCTGCGGTTGACGTTCTTG +
Preference number: 4 (lower is better)
Translates to: WDAATPGGGHGRREQGTTRTAKD*LRLTFL
Trigger: CAAGAACGTCAACCGCAGCCAGTCCTTTGCCGTGCG...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCCCCGCCAGGCCCGATaGCCTCTTTGTGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAPRQAR*PLCVSL
Trigger: CAGTGAAACACAAAGAGGCCATCGGGCCTGGCGGGG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTCAGAAGTCCGGTGACTaGCCCGCTGAGCGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFQKSGD*PAERAA
Trigger: CGCCGCACGCTCAGCGGGCCAGTCACCGGACTTCTG...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCTTGACGTTCTCCTGCTaGTTCTGCTTGGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGLTFSC*FCLARM
Trigger: CATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAA...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCATCTTGGAGGTGGGTGTaGGCGAGCCCTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGASWRWV*ASPGAW
Trigger: CCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGA...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGGCACCTTCTTGGAGGTaGGTGTGGGCGAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALAPSWR*VWASPG
Trigger: TCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGC...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTCTGGGGCCTCCACTCTaGCCGGAGGAAGGACCGCAG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFLGPPL*PEEGPQ
Trigger: CTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAG...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGAGCAGAAGCGTCCGTaGGAACTCCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCEQKRP*ELHWGG
Trigger: TCCACCCCAGTGGAGTTCCCACGGACGCTTCTGCTC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTTGCAGAGGGTCCCGATaGGCTGCTTCCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFCRGSR*AASLGQ
Trigger: CTGCCCCAGGGAAGCAGCTCATCGGGACCCTCTGCA...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCACAGCCTTGGACCATaGGCAGAAGCGTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALHSLGP*AEASVG
Trigger: TCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTG...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCAAGGGAGGGCGAGAATaGCCACACAACACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: WDAATPGGGHGRREQGTTKGGRE*PHNTAL
Trigger: CAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTT...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGCACGGGTTAGACTGGTaGTGTAGCAGCATCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLHGLDW*CSSISD
Trigger: GTCTGAGATGCTGCTACAGCACCAGTCTAACCCGTG...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGACGTGGTGAACTGGTaGACGATGTCCAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCDVVNW*TMSRAV
Trigger: GACAGCCCTGGACATCGTGCACCAGTTCACCACGTC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGTGATGCCGATCTCCTaGAGGTCCTCCCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCVMPIS*RSSQVM
Trigger: CATCACCTGGGAGGACCTGCAGGAGATCGGCATCAC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCGCGTATTCAGCCTTCTaGAGCTCTGCCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: WDAATPGGGHGRREQGTTAYSAF*SSASFL
Trigger: GAGGAAGCTGGCAGAGCTGCAGAAGGCTGAATACGC...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCCAGTCATGGCAGCCTaGAGCTCGTCACTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALPVMAA*SSSLSS
Trigger: CGAGCTCAGTGACGAGCTGCAGGCTGCCATGACTGG...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTGTCTCCTCCAGTTTCTaGCGGGCGCTGTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFVSSSF*RALSPG
Trigger: GCCAGGGGACAGCGCCCGGCAGAAACTGGAGGAGAC...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAGGTCGTCGAACATGCTaGCGATGTCGTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: ARGLACYMPCFHVAATLTGRRTC*RCRPGC
Trigger: GCATCCTGGACGACATCGGCAGCATGTTCGACGACC...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCCGAGGTGCAAAGGGCTaGTGCCGTTGGGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRRGAKG*CRWGRW
Trigger: CCACCGACCCCAACGGCACCAGCCCTTTGCACCTCG...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGATCACTTCAAGAGACTaGGGCGCCTTCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALITSRD*GAFRRR
Trigger: CCTGCGCCGGAAGGCGCCCCAGTCTCTTGAAGTGAT...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGTCATTTTAGGGGACTaGCAGTCGGCCGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAVILGD*QSAGVG
Trigger: GCCCACACCGGCCGACTGCCAGTCCCCTAAAATGAC...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAAGGACAGCTCCAGCATaGCCGCGATGCTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: ARGLACYMPCFHVAATLTRTAPA*PRCSSH
Trigger: GTGTGAAGAGCATCGCGGCCATGCTGGAGCTGTCCT...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCTTTCCTGCTGTTTATTaGCAGCCGACGGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCFPAVY*QPTAAP
Trigger: AGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAA...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTGTGATGATGTCCCCTaGCTTCACGTTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: WDAATPGGGHGRREQGTTCDDVP*LHVEAG
Trigger: ACCAGCCTCAACGTGAAGGCAGGGGACATCATCACA...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTAGGGTCCCGATGAGCTaGTTCCCTGGGGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFRVPMS*FPGAGL
Trigger: CAAGCCTGCCCCAGGGAAGCAGCTCATCGGGACCCT...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCATCAGCTTCTTCTGGTaGCCCAGCTTGGTGATGCCG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAISFFW*PSLVMP
Trigger: CGGCATCACCAAGCTGGGGCACCAGAAGAAGCTGAT...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCAACTTGACGTTCTCCTaGTGGTTCTGCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCNLTFS*WFCLAR
Trigger: CCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTT...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGAGTCGCGCGGGCCCTaGGCGTCCTCCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNESRGP*ASSCRI
Trigger: GATCCGGCAGGAGGACGCGCAGGGCCCGCGCGACTC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCCAGGTCGTCGAACATaGTGCCGATGTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALPGRRT*CRCRPG
Trigger: TCCTGGACGACATCGGCAGCATGTTCGACGACCTGG...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGATGATGTCGATGTaGCCGTTTTTAGCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: PGEGARHTLRGAASPWPGLMMSM*PFLAAR
Trigger: CCTCGCAGCTAAAAACGGCCACATCGACATCATCAG...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCATGTCGATGCCGGCTTaGAGGAGGAGCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAAMSMPA*RRSLMM
Trigger: CATCATCAGGCTCCTCCTCCAAGCCGGCATCGACAT...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCTCAGAGACGGACTTCTaGGAAAGCACCGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCSETDF*ESTVAR
Trigger: CCTGGCAACGGTGCTTTCCCAGAAGTCCGTCTCTGA...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCAGCATCAGCTTCTTCTaGTGCCCCAGCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: WDAATPGGGHGRREQGTTSISFF*CPSLVM
Trigger: CATCACCAAGCTGGGGCACCAGAAGAAGCTGATGCT...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGGGAGACACGGGCGGTaGCGTGCCGTGGGCGCGCTT +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNGRHGR*RAVGAL
Trigger: AAGCGCGCCCACGGCACGCCACCGCCCGTGTCTCCC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCTTCTCCTGCTGGTTCTaGTTGGCCCGGATGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRFSCWF*LARMRL
Trigger: GAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAA...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGTCCCCTGTCCCTTGTaGTGCGCCCGAGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNVPCPL*CARAAG
Trigger: GCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGAC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGTGCCAGTGCCATTATaGTACACGGACAGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAVPVPL*YTDSGG
Trigger: ACCGCCACTGTCCGTGTACCATAATGGCACTGGCAC...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTTGCCTTTGTTGTCCTTaGTGTCCACAGCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFCLCCP*CPQRPG
Trigger: CCCAGGCCGCTGTGGACATCAAGGACAACAAAGGCA...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCCACACATATTGCTGCTaGGGAGCAGCTGGACCACCC +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRHTYCC*GAAGPP
Trigger: GGGTGGTCCAGCTGCTCCTCAGCAGCAATATGTGTG...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCTCCGGTTGTCATGGATaGAGCCCTTCCACCGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRSGCHG*SPSTGH
Trigger: ATGGCCGGTGGAAGGGCTGCATCCATGACAACCGGA...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCTTCGGTCCCCACCTaGAAAAGGCTTCCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRASVPT*KRLPQH
Trigger: GTGCTGAGGAAGCCTTTTGCAGGTGGGGACCGAAGC...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTAGGTTAGCGGGTTTGTaGTCAGGCAGCCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFRLAGL*SGSQSG
Trigger: CCCTGACTGGCTGCCTGAGCACAAACCCGCTAACCT...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCCGATGCTCTTCACACTaGCGGCACTACCCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRRCSSH*RHYPCP
Trigger: TGGACACGGGTAGTGCCGGCAGTGTGAAGAGCATCG...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCTGTCGTCCAGGATGCTaGCAGTGCTCTTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRCRPGC*QCSFPP
Trigger: CGGCGGAAAAGAGCACTGGCAGCATCCTGGACGACA...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTGAGCTCGCTGTCCTaGAAGGTGGTCATTTTAGGG +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALLSSLS*KVVILG
Trigger: CCCTAAAATGACCACCTTCCAGGACAGCGAGCTCAG...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACAACCTCGAGTTCTTaGGGCGCAGAGAACTTAGGA +
Preference number: 4 (lower is better)
Translates to: ELQARGLACYMPCFHVAATTSSS*GAENLG
Trigger: TCCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGT...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CAA 72 bp ACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTaGGGGCGCAGAGAACTTAGGAGAGAAGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: TRPPRARHNLEF*GRRELRREARR
Trigger: CCTCCGTGCTTCTCTCCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGTCAGGTCGTAATTGTTaGAATAATCCTTGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLSGRNC*NNPWSP
Trigger: GGGCGACCAAGGATTATTGCAACAATTACGACCTGA...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGATGCACGGGTTAGACTaGTGCTGTAGCAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: RHTLRGAASPWPGLLHALMHGLD*CCSSIS
Trigger: TGAGATGCTGCTACAGCACCAGTCTAACCCGTGCAT...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGGGCCAGGCCGATCATaGACAGCCACACGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNGPGRS*TATRPG
Trigger: ACCTGGCCGTGTGGCTGTCCATGATCGGCCTGGCCC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGGCCTGGGGAGAGCCTaGTCGGGTTTTGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNGLGRA*SGFGGR
Trigger: ACGCCCACCAAAACCCGACCAGGCTCTCCCCAGGCC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACCGCTGGCTTCCACCTTaGCCAAGGGCGGGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNRWLPP*PRAGLR
Trigger: TCGAAGGCCCGCCCTTGGCCAAGGTGGAAGCCAGCG...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTGGGCTGCCAGGGCCTaGCAGCGGCACCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNWAARA*QRHLLG
Trigger: TCCAAGAAGGTGCCGCTGCCAGGCCCTGGCAGCCCA...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTCGCAGGCAGACAGCCTaGGCCTCTAACAGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFRRQTA*ASNSFC
Trigger: ACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCCTGCG...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTGGGTGGCAGGTGGCTaGAGGGCTTCTCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNWVAGG*RASQWW
Trigger: CCACCACTGAGAAGCCCTCCAGCCACCTGCCACCCA...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACAGGACTGGCTGCGGTTaGCGTTCTTGTCGGCACCTG +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNRTGCG*RSCRHL
Trigger: CAGGTGCCGACAAGAACGTCAACCGCAGCCAGTCCT...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR TCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACCTCTTTGTGTTTCACTaGGGCCAGCACGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNLFVFH*GQHGGH
Trigger: GTGGCCACCGTGCTGGCCTCAGTGAAACACAAAGAG...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTAAGCCATCCGGGTCCTaGAAGTTGACATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFKPSGS*KLTLIF
Trigger: GAAGATCAATGTCAACTTCCAGGACCCGGATGGCTT...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR GCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACCGATGTCGTCCAGGATaGTGCCAGTGCTCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNRCRPG*CQCSFP
Trigger: CGGAAAAGAGCACTGGCAGCATCCTGGACGACATCG...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CCA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACCACACAACACAGCCTTaGACCATGAGCAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNHTTQP*TMSRSV
Trigger: GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTG...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
3UTR CAA 72 bp AATCCGCCTCAGCTCATTCCCAATAAATTAATACTCTaGATAGCTTATATTCTGGGGGTGCGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NPPQLIPNKLIL*IAYILGVRWGR
Trigger: CCTGCCCCACCGCACCCCCAGAATATAAGCTATCAAGAGTATTAATTTATTGGGAATGAGCTGAGGCGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS TCA 90 bp CTTGGCGAGGGCGGCGGGCGGCTGTCGCGCGGGCGAGGGTGCGGGTaGAGGGCCGGCGCTGCCCGAAGGCAGCCCCGCGACCGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: LGEGGGRLSRGRGCG*RAGAARRQPRDRLD
Trigger: GTCAAGGCGGTCGCGGGGCTGCCTTCGGGCAGCGCCGGCCCTTCACCCGCACCCTCGCCCGCGCGACAGCCGCCCGCCGCCCTCGCCAAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp CTTGGGCGCTGTGGGCGGCGGCGGCGGCTTGGGAGACACGGGCGGTaGCGTGCCGTGGGCGCGCTTCACCTCTGGGCTGCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LGRCGRRRRLGRHGR*RAVGALHLWAARAW
Trigger: CCAGGCCCTGGCAGCCCAGAGGTGAAGCGCGCCCACGGCACGCCACCGCCCGTGTCTCCCAAGCCGCCGCCGCCGCCCACAGCGCCCAAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGAGCCTTCCGGAGGCTaGGCGGGGCTGTCCCCCGGG +
Preference number: 5 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMEPSGG*AGLSPG
Trigger: CCCGGGGGACAGCCCCGCCAAGCCTCCGGAAGGCTC...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp ACCCGTGTCCACGCTGCCGGCCAGGTCACTGGCCCGCCGGCACTGTaGCCGGACCCCCAGCAGGCCATCCTCAGGCTCGGCGTCAGGCAC +
Preference number: 5 (lower is better)
Translates to: TRVHAAGQVTGPPAL*PDPQQAILRLGVRH
Trigger: GTGCCTGACGCCGAGCCTGAGGATGGCCTGCTGGGGGTCCGGGCACAGTGCCGGCGGGCCAGTGACCTGGCCGGCAGCGTGGACACGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGTGGAACCCAGGAGCTaGGCCTTCCCGGGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMVEPRS*AFPGRG
Trigger: GCCGCGGCCCGGGAAGGCCAAGCTCCTGGGTTCCAC...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCACCGCCTTGACGGGCTaGGGCGCTGTGGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: APRPDAPILRYRSVCGEGTALTG*GAVGGG
Trigger: GCCGCCGCCCACAGCGCCCAAGCCCGTCAAGGCGGT...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp CCCAGGAGCTTGGCCTTCCCGGGCCGCGGCCTCTGCAGCAGCCTCTaGGCGGTCCCTACGTCCTCCGCCTTCACCGCCTGCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PRSLAFPGRGLCSSL*AVPTSSAFTACTSS
Trigger: GGAGCTGGTGCAGGCGGTGAAGGCGGAGGACGTAGGGACCGCGCAGAGGCTGCTGCAGAGGCCGCGGCCCGGGAAGGCCAAGCTCCTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GGCCCAGGGGGCCCATCTCCCAGCAGCTCCTGCGAGCTGCTCATGTaGCGTGCCCGACCACCCAGGCTGGAGTCCTGCCGCGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GPGGPSPSSSCELLM*RARPPRLESCRVVA
Trigger: GGCCACCACGCGGCAGGACTCCAGCCTGGGTGGTCGGGCACGGCACATGAGCAGCTCGCAGGAGCTGCTGGGAGATGGGCCCCCTGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GGCTGCTGGGCCCAGGGGGCCCATCTCCCAGCAGCTCCTGCGAGCTaGTCATGTGCCGTGCCCGACCACCCAGGCTGGAGTCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: GCWAQGAHLPAAPAS*SCAVPDHPGWSPAA
Trigger: CGCGGCAGGACTCCAGCCTGGGTGGTCGGGCACGGCACATGAGCAGCTCGCAGGAGCTGCTGGGAGATGGGCCCCCTGGGCCCAGCAGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GGGCCTTCGACACCCGCCTCGCCCTTGGAGGGACCCCGAGGCCGCTaGCGGCCAGTGCCATCCTCCACAAAGGGGCCTGGGTCTGCCGAC +
Preference number: 5 (lower is better)
Translates to: GPSTPASPLEGPRGR*RPVPSSTKGPGSAD
Trigger: GTCGGCAGACCCAGGCCCCTTTGTGGAGGATGGCACTGGCCGGCAGCGGCCTCGGGGTCCCTCCAAGGGCGAGGCGGGTGTCGAAGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp CGCTGTCGGACGCCGCATAGCGATTCAGGCTGTGGGCCCGCTTCTTaGGCCGCCCCGGCTCCGCGTCGGCCTCAGGGGGCAGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: RCRTPHSDSGCGPAS*AAPAPRRPQGAGTV
Trigger: CACTGTGCCTGCCCCCTGAGGCCGACGCGGAGCCGGGGCGGCCCAAGAAGCGGGCCCACAGCCTGAATCGCTATGCGGCGTCCGACAGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp GCCTGCTCCGAGGCCGGTCGGCGGCGCACGGTGCCAGTGCCATTATaGTACACGGACAGTGGCGGTGGTGGCTCAGGCCCGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: ACSEAGRRRTVPVPL*YTDSGGGGSGPASR
Trigger: GCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGCCGACCGGCCTCGGAGCAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCACGCTGGCCCTCTaGATGCTGTGGCCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMGTLAL*MLWPWR
Trigger: CCGCCACGGCCACAGCATCAAGAGGGCCAGCGTGCC...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCAGCCCCGCGACCGCCTaGACGGGCTTGGGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: PGEGARHTLRGAASPWPGSPATA*TGLGAV
Trigger: CACAGCGCCCAAGCCCGTCAAGGCGGTCGCGGGGCT...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS TCA 90 bp CTGGCTGCGGTTGACGTTCTTGTCGGCACCTGCGGGCGCCCTCACTaGGTGGCTGCGGCCCACGCGCCGCTGGACCGTGGCATAGGGGCC +
Preference number: 5 (lower is better)
Translates to: LAAVDVLVGTCGRPH*VAAAHAPLDRGIGA
Trigger: GGCCCCTATGCCACGGTCCAGCGGCGCGTGGGCCGCAGCCACTCAGTGAGGGCGCCCGCAGGTGCCGACAAGAACGTCAACCGCAGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp TGGCCGCGATGCTCTTCACACTGCCGGCACTACCCGTGTCCACGCTaGCGGCCAGGTCACTGGCCCGCCGGCACTGTGCCCGGACCCCCA +
Preference number: 5 (lower is better)
Translates to: WPRCSSHCRHYPCPR*RPGHWPAGTVPGPP
Trigger: TGGGGGTCCGGGCACAGTGCCGGCGGGCCAGTGACCTGGCCGGCAGCGTGGACACGGGTAGTGCCGGCAGTGTGAAGAGCATCGCGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GAGGCCCAGCCTGCTCCGAGGCCGGTCGGCGGCGCACGGTGCCAGTaGCATTATGGTACACGGACAGTGGCGGTGGTGGCTCAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: EAQPAPRPVGGARCQ*HYGTRTVAVVAQAR
Trigger: CCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGCCGACCGGCCTCGGAGCAGGCTGGGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp CGCGGGCCCTGCGCGTCCTCCTGCCGGATCTTCTCCTCCACCGCCTaGAGCGCCGCGGCCAGGCACGCGCTTGTCTCCTCCAGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RGPCASSCRIFSSTA*SAAARHALVSSSFC
Trigger: GCAGAAACTGGAGGAGACAAGCGCGTGCCTGGCCGCGGCGCTGCAGGCGGTGGAGGAGAAGATCCGGCAGGAGGACGCGCAGGGCCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp TGGGCACAGGCTGCGTCAGGACGGGCTTGGGAGAGACAGGCGGCTTaGCCGGCTTCCGGGCTTCGCCCTCGGGCGGGGGCAATGGGGGTA +
Preference number: 5 (lower is better)
Translates to: WAQAASGRAWERQAA*PASGLRPRAGAMGV
Trigger: TACCCCCATTGCCCCCGCCCGAGGGCGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp TGGGCGAGCCCTGGAGCTTGGGCACAGGCTGCGTCAGGACGGGCTTaGGAGAGACAGGCGGCTTGGCCGGCTTCCGGGCTTCGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: WASPGAWAQAASGRA*ERQAAWPASGLRPR
Trigger: CCGAGGGCGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGAAAGGGCTGGTGCCGTaGGGGTCGGTGGCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMKGLVP*GSVASP
Trigger: GGGAGACGCCACCGACCCCAACGGCACCAGCCCTTT...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAACACCCGCCTCGCCCTaGGAGGGACCCCGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: ARGLACYMPCFHVAATLTTPASP*EGPRGR
Trigger: GCGGCCTCGGGGTCCCTCCAAGGGCGAGGCGGGTGT...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGTCCCGCTCCTTGGCCTaGGGCCTGCGCTTGACCGTG +
Preference number: 5 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMSRSLA*GLRLTV
Trigger: CACGGTCAAGCGCAGGCCCAAGGCCAAGGAGCGGGA...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GACATGGGGCTGCTGGGCCCAGGGGGCCCATCTCCCAGCAGCTCCTaGGAGCTGCTCATGTGCCGTGCCCGACCACCCAGGCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: DMGLLGPGGPSPSSS*ELLMCRARPPRLES
Trigger: GGACTCCAGCCTGGGTGGTCGGGCACGGCACATGAGCAGCTCGCAGGAGCTGCTGGGAGATGGGCCCCCTGGGCCCAGCAGCCCCATGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GCTCCGGAGGCCCAGCCTGCTCCGAGGCCGGTCGGCGGCGCACGGTaGCAGTGCCATTATGGTACACGGACAGTGGCGGTGGTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: APEAQPAPRPVGGAR*QCHYGTRTVAVVAQ
Trigger: CTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGCCGACCGGCCTCGGAGCAGGCTGGGCCTCCGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp CTTCCACCTTGGCCAAGGGCGGGCCTTCGACACCCGCCTCGCCCTTaGAGGGACCCCGAGGCCGCTGCCGGCCAGTGCCATCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: LPPWPRAGLRHPPRP*RDPEAAAGQCHPPQ
Trigger: TTGTGGAGGATGGCACTGGCCGGCAGCGGCCTCGGGGTCCCTCCAAGGGCGAGGCGGGTGTCGAAGGCCCGCCCTTGGCCAAGGTGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp GCGGCGCACGGTGCCAGTGCCATTATGGTACACGGACAGTGGCGGTaGTGGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTTGGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: AAHGASAIMVHGQWR*WLRPGLPLLGLGPA
Trigger: CGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp CGGTCGGCGGCGCACGGTGCCAGTGCCATTATGGTACACGGACAGTaGCGGTGGTGGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RSAAHGASAIMVHGQ*RWWLRPGLPLLGLG
Trigger: CCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGCCGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp CTGGGCTGCCAGGGCCTGGCAGCGGCACCTTCTTGGAGGTGGGTGTaGGCGAGCCCTGGAGCTTGGGCACAGGCTGCGTCAGGACGGGCT +
Preference number: 5 (lower is better)
Translates to: LGCQGLAAAPSWRWV*ASPGAWAQAASGRA
Trigger: AGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCCTGGCAGCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGTTCCCTGGGGCAGGCTaGGTTCAGTGCCTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMFPGAG*VQCLLG
Trigger: CCCGAGCAGGCACTGAACCAAGCCTGCCCCAGGGAA...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGGCGCTGGCTTCCACCTaGGCCAAGGGCGGGCCTTCG +
Preference number: 5 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLALAST*AKGGPS
Trigger: CGAAGGCCCGCCCTTGGCCAAGGTGGAAGCCAGCGC...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCGCCCGGATGCGCCTCTaGAGTGTGGCGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: APRPDAPILRYRSVCGEGARMRL*SVALAS
Trigger: GGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGGC...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp TGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCGGCGAGCCCTGGAGCTaGGGCACAGGCTGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: WDAATPGGGHGRREQGTTGEPWS*GTGCVR
Trigger: CCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCC...GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp TTCTTGGTGGAACCCAGGAGCTTGGCCTTCCCGGGCCGCGGCCTCTaGAGCAGCCTCTGCGCGGTCCCTACGTCCTCCGCCTTCACCGCC +
Preference number: 5 (lower is better)
Translates to: FLVEPRSLAFPGRGL*SSLCAVPTSSAFTA
Trigger: GGCGGTGAAGGCGGAGGACGTAGGGACCGCGCAGAGGCTGCTGCAGAGGCCGCGGCCCGGGAAGGCCAAGCTCCTGGGTTCCACCAAGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp CCCGGCCCCCACCCCCAATGGAGGACAGCTCCAGCATGGCCGCGATaGTCTTCACACTGCCGGCACTACCCGTGTCCACGCTGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGPHPQWRTAPAWPR*SSHCRHYPCPRCRP
Trigger: TGGCCGGCAGCGTGGACACGGGTAGTGCCGGCAGTGTGAAGAGCATCGCGGCCATGCTGGAGCTGTCCTCCATTGGGGGTGGGGGCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp CTTCTTGGGCGGCTGCTCCCCATAGACCTGCCCGGCGTGGGCCACTaGAGGCTGGGACCGGGCCACACCTGCAGAGCCTTCCGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LLGRLLPIDLPGVGH*RLGPGHTCRAFRRL
Trigger: AAGCCTCCGGAAGGCTCTGCAGGTGTGGCCCGGTCCCAGCCTCCAGTGGCCCACGCCGGGCAGGTCTATGGGGAGCAGCCGCCCAAGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343516.8
ENST00000564289.1
CDS-3UTR CAA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGACCGTTGCCAGGAGCTaGACGCCTTCAGAGCCCGCG +
Preference number: 5 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLTVARS*TPSEPA
Trigger: CGCGGGCTCTGAAGGCGTCAAGCTCCTGGCAACGGT...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGACGGCCTCAGAGCTCTaGCCCTCCGATGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLTASEL*PSDAGS
Trigger: GGAGCCAGCATCGGAGGGCAAGAGCTCTGAGGCCGT...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGGGCAGTTCTGTGCTGTTCCGGTGGCCCGGCTaGGTGACACCAATGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LVLRPSGWPGVPMGSSVLFRWPG*VTPMAV
Trigger: CACGGCCATTGGTGTCACCAAGCCGGGCCACCGGAA...CAGCACAGAACTGCCCATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp AGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGGGCTCATCCGCCAGGTaGGCACTAGCCAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: SSLGPPLWPEEGPQADSLGSSAR*ALARAE
Trigger: CTCGGCCCTGGCTAGTGCCAACCTGGCGGATGAGCC...CAGGCTGTCTGCCTGCGGTCCTTCCTCCGGCCAGAGTGGAGGCCCCAGGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAGGAGAGACAGGCGGCTaGGCCGGCTTCCGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: ARGLACYMPCFHVAATLTGETGG*AGFRAS
Trigger: CGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCC...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCGCCGCGCCCAGACGCGCCCATCCTGAGGTATAGGTCAGTGTGCGGGGAGGGCCGGCCAGGCACGCGCTaGTCTCCTCCAGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: APRPDAPILRYRSVCGEGRPGTR*SPPVSA
Trigger: GGCAGAAACTGGAGGAGACAAGCGCGTGCCTGGCCG...GCCCTCCCCGCACACTGACCTATACCTCAGGATGGGCGCGTCTGGGCGCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGGTCTGCCTAGAGCCCTaGGAGCCCCCGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RHTLRGAASPWPGLLHALVCLEP*EPPARR
Trigger: CCGCCTGGCCGGGGGCTCCAAGGGCTCTAGGCAGAC...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp GGCTTGGCGGGGCTGTCCCCCGGGCCGGACTCAGAGACGGACTTCTaGGAAAGCACCGTTGCCAGGAGCTTGACGCCTTCAGAGCCCGCG +
Preference number: 5 (lower is better)
Translates to: GLAGLSPGPDSETDF*ESTVARSLTPSEPA
Trigger: CGCGGGCTCTGAAGGCGTCAAGCTCCTGGCAACGGTGCTTTCCCAGAAGTCCGTCTCTGAGTCCGGCCCGGGGGACAGCCCCGCCAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp GCGCACGGTGCCAGTGCCATTATGGTACACGGACAGTGGCGGTGGTaGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTTGGGCCTGCGCTT +
Preference number: 5 (lower is better)
Translates to: AHGASAIMVHGQWRW*LRPGLPLLGLGPAL
Trigger: AAGCGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp GCAGCGGCACCTTCTTGGAGGTGGGTGTGGGCGAGCCCTGGAGCTTaGGCACAGGCTGCGTCAGGACGGGCTTGGGAGAGACAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: AAAPSWRWVWASPGA*AQAASGRAWERQAA
Trigger: AGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp GGGCCTGGCAGCGGCACCTTCTTGGAGGTGGGTGTGGGCGAGCCCTaGAGCTTGGGCACAGGCTGCGTCAGGACGGGCTTGGGAGAGACA +
Preference number: 5 (lower is better)
Translates to: GPGSGTFLEVGVGEP*SLGTGCVRTGLGET
Trigger: TGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp TCACCTCTGGGCTGCCAGGGCCTGGCAGCGGCACCTTCTTGGAGGTaGGTGTGGGCGAGCCCTGGAGCTTGGGCACAGGCTGCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: SPLGCQGLAAAPSWR*VWASPGAWAQAASG
Trigger: TCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCCTGGCAGCCCAGAGGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGGGGTGGGCTTCACCTaGGCCGTAGCTGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCGVGFT*AVAGAG
Trigger: TCCAGCCCCAGCTACGGCCAAGGTGAAGCCCACCCC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACACTGCGGTTGACGTTCTaGTCGGCACCTGCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: ARGLACYMPCFHVAATLTLRLTF*SAPAGA
Trigger: GGCGCCCGCAGGTGCCGACAAGAACGTCAACCGCAG...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCGGCAGCGGCACCTTCTaGGAGGTGGGTGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCGSGTF*EVGVGE
Trigger: CTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCC...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTGCCGACGGCAGCGCCTaGCCCAGACCTCCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFADGSA*PRPPLP
Trigger: GGGCAGGGGAGGTCTGGGCAAGGCGCTGCCGTCGGC...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp CCCCAATGGAGGACAGCTCCAGCATGGCCGCGATGCTCTTCACACTaGCGGCACTACCCGTGTCCACGCTGCCGGCCAGGTCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: PQWRTAPAWPRCSSH*RHYPCPRCRPGHWP
Trigger: GGGCCAGTGACCTGGCCGGCAGCGTGGACACGGGTAGTGCCGGCAGTGTGAAGAGCATCGCGGCCATGCTGGAGCTGTCCTCCATTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp TTCTTGGAGGTGGGTGTGGGCGAGCCCTGGAGCTTGGGCACAGGCTaGGTCAGGACGGGCTTGGGAGAGACAGGCGGCTTGGCCGGCTTC +
Preference number: 5 (lower is better)
Translates to: FLEVGVGEPWSLGTG*VRTGLGETGGLAGF
Trigger: GAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp TCACGGCCTCAGAGCTCTTGCCCTCCGATGCTGGCTCCAGCTTCTTaGGCGGCTGCTCCCCATAGACCTGCCCGGCGTGGGCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: SRPQSSCPPMLAPAS*AAAPHRPARRGPLE
Trigger: CTCCAGTGGCCCACGCCGGGCAGGTCTATGGGGAGCAGCCGCCCAAGAAGCTGGAGCCAGCATCGGAGGGCAAGAGCTCTGAGGCCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp GGCCCTCATCCAGGAGGTACTCCTGGCTTCGAGACATGGGGCTGCTaGGCCCAGGGGGCCCATCTCCCAGCAGCTCCTGCGAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GPHPGGTPGFETWGC*AQGAHLPAAPASCS
Trigger: TGAGCAGCTCGCAGGAGCTGCTGGGAGATGGGCCCCCTGGGCCCAGCAGCCCCATGTCTCGAAGCCAGGAGTACCTCCTGGATGAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCAGCGCCGCACACATATaGCTGCTGAGGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGEGARHTLRGAASPWPGSAAHI*LLRSSW
Trigger: CCAGCTGCTCCTCAGCAGCAATATGTGTGCGGCGCT...GCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCCCCCTCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACACGGGAACCTGCTCGCTaGACAATGGCCTCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ARGLACYMPCFHVAATLTREPAR*TMASPR
Trigger: CCTGGGCGAGGCCATTGTCAAGCGAGCAGGTTCCCG...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCCCGGCCTCCCGCTCCTaGGCCTTGGGCCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRPASRS*ALGLRL
Trigger: CAAGCGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGG...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGTCCAGGGGCCGGAGTaGTGCTTCTGCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAVQGPE*CFCRAL
Trigger: CAGGGCCCTGCAGAAGCACAACTCCGGCCCCTGGAC...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTTGGTCCCCTGTCCCTTGTGCTGCGCCCGAGCGGCTGGCCGGGCGTCCCGATGCCACACAACACAGCCTaGGACCATGAGCAGAAGCGT +
Preference number: 5 (lower is better)
Translates to: LGPLSLVLRPSGWPGVPMPHNTA*DHEQKR
Trigger: ACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGG...CATCGGGACGCCCGGCCAGCCGCTCGGGCGCAGCACAAGGGACAGGGGACCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GGCCAGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCTCTCGCAACAGCTGCTaGATCTCCCTGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GQAHPQRSCKPVAWPATCSRNSC*ISLLAW
Trigger: CCAGGCCAGCAGGGAGATCAAGCAGCTGTTGCGAGA...GCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp AGGAGGAGCCTGATGATGTCGATGTGGCCGTTTTTAGCTGCGAGGTaGAAAGGGCTGGTGCCGTTGGGGTCGGTGGCGTCTCCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: RRSLMMSMWPFLAAR*KGLVPLGSVASPGR
Trigger: CCGGCCGGGAGACGCCACCGACCCCAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGCTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp TCAGCACCCAGATCTCCTCTGGGGGTGCAGAGGGTCCCGATGAGCTaGTTCCCTGGGGCAGGCTTGGTTCAGTGCCTGCTCGGGAACCTG +
Preference number: 5 (lower is better)
Translates to: SAPRSPLGVQRVPMS*FPGAGLVQCLLGNL
Trigger: CAGGTTCCCGAGCAGGCACTGAACCAAGCCTGCCCCAGGGAAGCAGCTCATCGGGACCCTCTGCACCCCCAGAGGAGATCTGGGTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp CGGCTCTACCTGATGATGTCGATGTGGCCGTTTTTAGCTGCGAGGTaGAAAGGGCTGGTGCCGTTGGGGTCGGTGGCGTCTCCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: RLYLMMSMWPFLAAR*KGLVPLGSVASPGR
Trigger: CCGGCCGGGAGACGCCACCGACCCCAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGTAGAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562055.1
CDS CCA 90 bp GGGCCAGTCATGGCAGCCTGCAGCTCGTCACTGAGCTCGCTGTCCTaGAAGGTGGTCATTTTAGGGGACTGGCAGTCGGCCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GPVMAACSSSLSSLS*KVVILGDWQSAGVG
Trigger: GCCCACACCGGCCGACTGCCAGTCCCCTAAAATGACCACCTTCCAGGACAGCGAGCTCAGTGACGAGCTGCAGGCTGCCATGACTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGGCCAGGTTAGCGGGTTaGTGCTCAGGCAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RHTLRGAASPWPGLLHALARLAG*CSGSQS
Trigger: TGACTGGCTGCCTGAGCACAAACCCGCTAACCTGGC...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCATTCTGGTGCCCCAGCTaGGTGATGCCGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAFWCPS*VMPISC
Trigger: GCAGGAGATCGGCATCACCAAGCTGGGGCACCAGAA...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGGCCCGATGGCCTCTTaGTGTTTCACTGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GGGHGRREQGTTSSSWGAGPMAS*CFTEAS
Trigger: GCTGGCCTCAGTGAAACACAAAGAGGCCATCGGGCC...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCTGCGTCAGGACGGGCTaGGGAGAGACAGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRCVRTG*GETGGL
Trigger: CAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCA...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCGTTTCCTGCTGTTTATaGACAGCCGACGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: ELQARGLACYMPCFHVAAVSCCL*TADGSA
Trigger: GGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAAC...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp TTTCCGCAGAGCGCAGCCTCGTGCAGGGCCGTGCCGGACTTGGTCTaGCGGTTAATGTCGATGCCGGCTTGGAGGAGGAGCCTGATGATG +
Preference number: 5 (lower is better)
Translates to: FPQSAASCRAVPDLV*RLMSMPAWRRSLMM
Trigger: CATCATCAGGCTCCTCCTCCAAGCCGGCATCGACATTAACCGCCAGACCAAGTCCGGCACGGCCCTGCACGAGGCTGCGCTCTGCGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTGATCAATTCCGTGTaGCCGTTCAGGGCCGCATGG +
Preference number: 5 (lower is better)
Translates to: RHTLRGAASPWPGLLHALLINSV*PFRAAW
Trigger: CCATGCGGCCCTGAACGGCAACACGGAATTGATCAG...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACAAGCGGCCGCATGCCTTaGTTGTCCTTGATGTCCACA +
Preference number: 5 (lower is better)
Translates to: ARGLACYMPCFHVAATLTSGRMP*LSLMST
Trigger: TGTGGACATCAAGGACAACAAAGGCATGCGGCCGCT...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTAGGGCCGTGCCGGACTaGGTCTGGCGGTTAATGTCG +
Preference number: 5 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFRAVPD*VWRLMS
Trigger: CGACATTAACCGCCAGACCAAGTCCGGCACGGCCCT...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp AGGCACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGTCATTGCCCGTCCGGTaGTCATGGATGCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: RHTLRGAASPWPGLLHALSLPVR*SWMQPF
Trigger: GAAGGGCTGCATCCATGACAACCGGACGGGCAATGA...CAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAGGGTGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCTCCTGCTGGTTCTGCTaGGCCCGGATGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRSCWFC*ARMRLL
Trigger: CAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGA...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCCACAACCTCGAGTTCTaGGGGCGCAGAGAACTTAGG +
Preference number: 5 (lower is better)
Translates to: ELQARGLACYMPCFHVAAHNLEF*GRRELR
Trigger: CCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTG...GGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAACCAGTCAGTACTTCTaGGAGGGGGCAGGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GGGHGRREQGTTSSSWGATSQYF*EGAGGE
Trigger: CTCTCCTCCTGCCCCCTCCAAGAAGTACTGACTGGT...TGCGCCCCAAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GGCTTGGAGGAGGAGCCTGATGATGTCGATGTGGCCGTTTTTAGCTaGGAGGTGCAAAGGGCTGGTGCCGTTGGGGTCGGTGGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: GLEEEPDDVDVAVFS*EVQRAGAVGVGGVS
Trigger: GGAGACGCCACCGACCCCAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGCTCCTCCTCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGGCGTCTTCCCCGAGTaGTCCACCATGCACGGGTTA +
Preference number: 5 (lower is better)
Translates to: LLPRGCHADTPTFTKPTRGVFPE*STMHGL
Trigger: TAACCCGTGCATGGTGGACAACTCGGGGAAGACGCC...GCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp CTGCTACCGGCTCTACCTGATGATGTCGATGTGGCCGTTTTTAGCTaGGAGGTGCAAAGGGCTGGTGCCGTTGGGGTCGGTGGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLPALPDDVDVAVFS*EVQRAGAVGVGGVS
Trigger: GGAGACGCCACCGACCCCAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGTAGAGCCGGTAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562055.1
CDS-3UTR CAA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTGGCCGCATGCCTTTGTaGTCCTTGATGTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFGRMPL*SLMSTA
Trigger: CGCTGTGGACATCAAGGACAACAAAGGCATGCGGCC...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp GTGTCAGACTCGGTCAGGATGAACTTGACGTTCTCCTGCTGGTTCTaGTTGGCCCGGATGCGCCTCTTGAGTGTGGCGCTGGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: VSDSVRMNLTFSCWF*LARMRLLSVALAST
Trigger: GGTGGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 90 bp CGCTTGACCGTGTCAGACTCGGTCAGGATGAACTTGACGTTCTCCTaGTGGTTCTGCTTGGCCCGGATGCGCCTCTTGAGTGTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: RLTVSDSVRMNLTFS*WFCLARMRLLSVAL
Trigger: CAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGACACGGTCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACATTGACATTGATCTTCTaGGTGGAACCCAGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: ARGLACYMPCFHVAATLTLTLIF*VEPRSL
Trigger: CAAGCTCCTGGGTTCCACCAAGAAGATCAATGTCAA...TGTCAGCGTGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTAATGTCGATGCCGGCTaGGAGGAGGAGCCTGATGAT +
Preference number: 5 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFNVDAG*EEEPDD
Trigger: ATCATCAGGCTCCTCCTCCAAGCCGGCATCGACATT...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACGCCTTGGGCCTGCGCTaGACCGTGTCAGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNALGLR*TVSDSV
Trigger: GACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGGC...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 90 bp TTGACCGTGTCAGACTCGGTCAGGATGAACTTGACGTTCTCCTGCTaGTTCTGCTTGGCCCGGATGCGCCTCTTGAGTGTGGCGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LTVSDSVRMNLTFSC*FCLARMRLLSVALA
Trigger: AGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGACACGGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp CCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTTTTTCGGTCAGGATGAACTaGACGTTCTCCTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PPAASTRPTPQSLVFGIFSVRMN*TFSCWF
Trigger: GAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGA...AAAAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTGGCGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTTCCTCACGTGGGCATaGATCCCGCTATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNFLTWA*IPLSSS
Trigger: GCTGCTGGATAGCGGGATCAATGCCCACGTGAGGAA...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS-3UTR CAA 90 bp GAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACAAGGACTGGCTGCGGTaGACGTTCTTGTCGGCACCT +
Preference number: 5 (lower is better)
Translates to: ENDHTTQPWTMSRSVRGNKDWLR*TFLSAP
Trigger: AGGTGCCGACAAGAACGTCAACCGCAGCCAGTCCTT...GTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GGGCCGGCGCTGCCCGAAGGCAGCCCCGCGACCGCCTTGACGGGCTaGGGCGCTGTGGGCGGCGGCGGCGGCTTGGGAGACACGGGCGGT +
Preference number: 6 (lower is better)
Translates to: GPALPEGSPATALTG*GAVGGGGGLGDTGG
Trigger: ACCGCCCGTGTCTCCCAAGCCGCCGCCGCCGCCCACAGCGCCCAAGCCCGTCAAGGCGGTCGCGGGGCTGCCTTCGGGCAGCGCCGGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CCGGCTCCGCGTCGGCCTCAGGGGGCAGGCACAGTGTaGGCACAGCCGTCGGCACGGGTGGGGGCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: PAPRRPQGAGTV*AQPSARVGAQA
Trigger: GGCCTGCGCCCCCACCCGTGCCGACGGCTGTGCCCACACTGTGCCTGCCCCCTGAGGCCGACGCGGAGCCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp TCCGCCGCCGAGTCGCGCGGGCCCTGCGCGTCCTCCTaGCGGATCTTCTCCTCCACCGCCTGCAGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: SAAESRGPCASS*RIFSSTACSAA
Trigger: CGCGGCGCTGCAGGCGGTGGAGGAGAAGATCCGGCAGGAGGACGCGCAGGGCCCGCGCGACTCGGCGGCGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GGCGGCGGCTTGGGAGACACGGGCGGTGGCGTGCCGTaGGCGCGCTTCACCTCTGGGCTGCCAGGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: GGGLGDTGGGVP*ARFTSGLPGPG
Trigger: GCCAGGCCCTGGCAGCCCAGAGGTGAAGCGCGCCCACGGCACGCCACCGCCCGTGTCTCCCAAGCCGCCGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GCCGTGCCCGACCACCCAGGCTGGAGTCCTGCCGCGTaGTGGCCCTCGGGGTGGGTGGCAGGTGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: AVPDHPGWSPAA*WPSGWVAGGWR
Trigger: CCTCCAGCCACCTGCCACCCACCCCGAGGGCCACCACGCGGCAGGACTCCAGCCTGGGTGGTCGGGCACGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp GGCTGCGTCAGGACGGGCTTGGGAGAGACAGGCGGCTaGGCCGGCTTCCGGGCTTCGCCCTCGGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: GCVRTGLGETGG*AGFRASPSGGG
Trigger: GCCCCCGCCCGAGGGCGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp GCCGCGGCCAGGCACGCGCTTGTCTCCTCCAGTTTCTaGCGGGCGCTGTCCCCTGGCGAGGCGCCTTCGGGC +
Preference number: 6 (lower is better)
Translates to: AAARHALVSSSF*RALSPGEAPSG
Trigger: GCCCGAAGGCGCCTCGCCAGGGGACAGCGCCCGGCAGAAACTGGAGGAGACAAGCGCGTGCCTGGCCGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GGGACCGGGCCACACCTGCAGAGCCTTCCGGAGGCTTaGCGGGGCTGTCCCCCGGGCCGGACTCAGAGACGG +
Preference number: 6 (lower is better)
Translates to: GTGPHLQSLPEA*RGCPPGRTQRR
Trigger: CCGTCTCTGAGTCCGGCCCGGGGGACAGCCCCGCCAAGCCTCCGGAAGGCTCTGCAGGTGTGGCCCGGTCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343516.8
ENST00000564289.1
CDS CCA 72 bp AGGCCCCCGGCGGGCAGTGGCCAGAAGTCCGGTGACTaGCCCGCTGAGCGTGCGGCGCCGGTTCACCACCTC +
Preference number: 6 (lower is better)
Translates to: RPPAGSGQKSGD*PAERAAPVHHL
Trigger: GAGGTGGTGAACCGGCGCCGCACGCTCAGCGGGCCAGTCACCGGACTTCTGGCCACTGCCCGCCGGGGGCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GCTGCGTCAGGACGGGCTTGGGAGAGACAGGCGGCTTaGCCGGCTTCCGGGCTTCGCCCTCGGGCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: AASGRAWERQAA*PASGLRPRAGA
Trigger: TGCCCCCGCCCGAGGGCGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp TTGGCCAAGGGCGGGCCTTCGACACCCGCCTCGCCCTaGGAGGGACCCCGAGGCCGCTGCCGGCCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: LAKGGPSTPASP*EGPRGRCRPVP
Trigger: TGGCACTGGCCGGCAGCGGCCTCGGGGTCCCTCCAAGGGCGAGGCGGGTGTCGAAGGCCCGCCCTTGGCCAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp CTCATGTGCCGTGCCCGACCACCCAGGCTGGAGTCCTaGCGCGTGGTGGCCCTCGGGGTGGGTGGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LMCRARPPRLES*RVVALGVGGRW
Trigger: CCACCTGCCACCCACCCCGAGGGCCACCACGCGGCAGGACTCCAGCCTGGGTGGTCGGGCACGGCACATGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp TCTTGTCGGCACCTGCGGGCGCCCTCACTGAGTGGCTaGGGCCCACGCGCCGCTGGACCGTGGCATAGGGGC +
Preference number: 6 (lower is better)
Translates to: SCRHLRAPSLSG*GPRAAGPWHRG
Trigger: GCCCCTATGCCACGGTCCAGCGGCGCGTGGGCCGCAGCCACTCAGTGAGGGCGCCCGCAGGTGCCGACAAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp ACACCCGCCTCGCCCTTGGAGGGACCCCGAGGCCGCTaGCGGCCAGTGCCATCCTCCACAAAGGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: TPASPLEGPRGR*RPVPSSTKGPG
Trigger: CCCAGGCCCCTTTGTGGAGGATGGCACTGGCCGGCAGCGGCCTCGGGGTCCCTCCAAGGGCGAGGCGGGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GCGAGCTGCTCATGTGCCGTGCCCGACCACCCAGGCTaGAGTCCTGCCGCGTGGTGGCCCTCGGGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: ASCSCAVPDHPG*SPAAWWPSGWV
Trigger: CACCCACCCCGAGGGCCACCACGCGGCAGGACTCCAGCCTGGGTGGTCGGGCACGGCACATGAGCAGCTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp ACGCCGCATAGCGATTCAGGCTGTGGGCCCGCTTCTTaGGCCGCCCCGGCTCCGCGTCGGCCTCAGGGGGCA +
Preference number: 6 (lower is better)
Translates to: TPHSDSGCGPAS*AAPAPRRPQGA
Trigger: TGCCCCCTGAGGCCGACGCGGAGCCGGGGCGGCCCAAGAAGCGGGCCCACAGCCTGAATCGCTATGCGGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp TGGGACCGGGCCACACCTGCAGAGCCTTCCGGAGGCTaGGCGGGGCTGTCCCCCGGGCCGGACTCAGAGACG +
Preference number: 6 (lower is better)
Translates to: WDRATPAEPSGG*AGLSPGPDSET
Trigger: CGTCTCTGAGTCCGGCCCGGGGGACAGCCCCGCCAAGCCTCCGGAAGGCTCTGCAGGTGTGGCCCGGTCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343516.8
ENST00000564289.1
CDS CAA 72 bp CCTCCACCGCCTGCAGCGCCGCGGCCAGGCACGCGCTaGTCTCCTCCAGTTTCTGCCGGGCGCTGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: PPPPAAPRPGTR*SPPVSAGRCPL
Trigger: CAGGGGACAGCGCCCGGCAGAAACTGGAGGAGACAAGCGCGTGCCTGGCCGCGGCGCTGCAGGCGGTGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp AGGCCATCCTCAGGCTCGGCGTCAGGCACCGGCTCATCCGCCAGGTaGGCACTAGCCAGGGCCGAGCTGGAGCGCTTGGGTGGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RPSSGSASGTGSSAR*ALARAELERLGGGG
Trigger: GCCGCCCCCACCCAAGCGCTCCAGCTCGGCCCTGGCTAGTGCCAACCTGGCGGATGAGCCGGTGCCTGACGCCGAGCCTGAGGATGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GCTTCCACCTTGGCCAAGGGCGGGCCTTCGACACCCGCCTCGCCCTaGGAGGGACCCCGAGGCCGCTGCCGGCCAGTGCCATCCTCCACA +
Preference number: 6 (lower is better)
Translates to: ASTLAKGGPSTPASP*EGPRGRCRPVPSST
Trigger: TGTGGAGGATGGCACTGGCCGGCAGCGGCCTCGGGGTCCCTCCAAGGGCGAGGCGGGTGTCGAAGGCCCGCCCTTGGCCAAGGTGGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp TTGGGCACAGGCTGCGTCAGGACGGGCTTGGGAGAGACAGGCGGCTaGGCCGGCTTCCGGGCTTCGCCCTCGGGCGGGGGCAATGGGGGT +
Preference number: 6 (lower is better)
Translates to: LGTGCVRTGLGETGG*AGFRASPSGGGNGG
Trigger: ACCCCCATTGCCCCCGCCCGAGGGCGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GTGGGCGAGCCCTGGAGCTTGGGCACAGGCTGCGTCAGGACGGGCTaGGGAGAGACAGGCGGCTTGGCCGGCTTCCGGGCTTCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: VGEPWSLGTGCVRTG*GETGGLAGFRASPS
Trigger: CGAGGGCGAAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GGATCTTCTCCTCCACCGCCTGCAGCGCCGCGGCCAGGCACGCGCTaGTCTCCTCCAGTTTCTGCCGGGCGCTGTCCCCTGGCGAGGCGC +
Preference number: 6 (lower is better)
Translates to: GSSPPPPAAPRPGTR*SPPVSAGRCPLARR
Trigger: GCGCCTCGCCAGGGGACAGCGCCCGGCAGAAACTGGAGGAGACAAGCGCGTGCCTGGCCGCGGCGCTGCAGGCGGTGGAGGAGAAGATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS TCA 72 bp GTTGACGTTCTTGTCGGCACCTGCGGGCGCCCTCACTaGGTGGCTGCGGCCCACGCGCCGCTGGACCGTGGC +
Preference number: 6 (lower is better)
Translates to: VDVLVGTCGRPH*VAAAHAPLDRG
Trigger: GCCACGGTCCAGCGGCGCGTGGGCCGCAGCCACTCAGTGAGGGCGCCCGCAGGTGCCGACAAGAACGTCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp TGCGCGTCCTCCTGCCGGATCTTCTCCTCCACCGCCTaGAGCGCCGCGGCCAGGCACGCGCTTGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: CASSCRIFSSTA*SAAARHALVSS
Trigger: GGAGGAGACAAGCGCGTGCCTGGCCGCGGCGCTGCAGGCGGTGGAGGAGAAGATCCGGCAGGAGGACGCGCA
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CGGCCGGTGTGGGCTCAGGCGGGGGCGGCGACTCGATaGCCATCACTTCAAGAGACTGGGGCGCCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: RPVWAQAGAATR*PSLQETGAPSG
Trigger: GCCGGAAGGCGCCCCAGTCTCTTGAAGTGATGGCCATCGAGTCGCCGCCCCCGCCTGAGCCCACACCGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GCCGTGGGCGCGCTTCACCTCTGGGCTGCCAGGGCCTaGCAGCGGCACCTTCTTGGAGGTGGGTGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: AVGALHLWAARA*QRHLLGGGCGR
Trigger: TCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCCTGGCAGCCCAGAGGTGAAGCGCGCCCACGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GTGCGGCGCCGGTTCACCACCTCCCCGCCAGGCCCGATGGCCTCTTaGTGTTTCACTGAGGCCAGCACGGTGGCCACCCGGCCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: VRRRFTTSPPGPMAS*CFTEASTVATRPGS
Trigger: AGAGCCGGGCCGGGTGGCCACCGTGCTGGCCTCAGTGAAACACAAAGAGGCCATCGGGCCTGGCGGGGAGGTGGTGAACCGGCGCCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS TCA 72 bp CTCCCCGCCAGGCCCGATGGCCTCTTTGTGTTTCACTaGGGCCAGCACGGTGGCCACCCGGCCCGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LPARPDGLFVFH*GQHGGHPARLW
Trigger: CCAGAGCCGGGCCGGGTGGCCACCGTGCTGGCCTCAGTGAAACACAAAGAGGCCATCGGGCCTGGCGGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp GCCCAGGGGGCCCATCTCCCAGCAGCTCCTGCGAGCTaGTCATGTGCCGTGCCCGACCACCCAGGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: AQGAHLPAAPAS*SCAVPDHPGWS
Trigger: ACTCCAGCCTGGGTGGTCGGGCACGGCACATGAGCAGCTCGCAGGAGCTGCTGGGAGATGGGCCCCCTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp GCCCAGCCTGCTCCGAGGCCGGTCGGCGGCGCACGGTaGCAGTGCCATTATGGTACACGGACAGTGGCGGTG +
Preference number: 6 (lower is better)
Translates to: AQPAPRPVGGAR*QCHYGTRTVAV
Trigger: CACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGCCGACCGGCCTCGGAGCAGGCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GAGGCCGGTCGGCGGCGCACGGTGCCAGTGCCATTATaGTACACGGACAGTGGCGGTGGTGGCTCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: EAGRRRTVPVPL*YTDSGGGGSGP
Trigger: CGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGCCGACCGGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GGCTGCCAGGGCCTGGCAGCGGCACCTTCTTGGAGGTaGGTGTGGGCGAGCCCTGGAGCTTGGGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: GCQGLAAAPSWR*VWASPGAWAQA
Trigger: AGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCCTGGCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CCTCTGGGCTGCCAGGGCCTGGCAGCGGCACCTTCTTaGAGGTGGGTGTGGGCGAGCCCTGGAGCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: PLGCQGLAAAPS*RWVWASPGAWA
Trigger: TGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCCTGGCAGCCCAGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp CGGATGCGCCTCTTGAGTGTGGCGCTGGCTTCCACCTaGGCCAAGGGCGGGCCTTCGACACCCGCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: RMRLLSVALAST*AKGGPSTPASP
Trigger: GGGCGAGGCGGGTGTCGAAGGCCCGCCCTTGGCCAAGGTGGAAGCCAGCGCCACACTCAAGAGGCGCATCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp GGTGGTGGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTaGGGCCTGCGCTTGACCGTGTCAGACTCGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GGGSGPASRSLA*GLRLTVSDSVR
Trigger: CCTGACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp CCCTGGAGCTTGGGCACAGGCTGCGTCAGGACGGGCTaGGGAGAGACAGGCGGCTTGGCCGGCTTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: PWSLGTGCVRTG*GETGGLAGFRA
Trigger: AGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp ACCTCTGGGCTGCCAGGGCCTGGCAGCGGCACCTTCTaGGAGGTGGGTGTGGGCGAGCCCTGGAGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: TSGLPGPGSGTF*EVGVGEPWSLG
Trigger: GCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCCTGGCAGCCCAGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp TCGGTGGCGTCTCCCGGCCGGGGCTCCAGCAGCGCCGCACACATATaGCTGCTGAGGAGCAGCTGGACCACCCCAACGCGGCCGAACTCG +
Preference number: 6 (lower is better)
Translates to: SVASPGRGSSSAAHI*LLRSSWTTPTRPNS
Trigger: CGAGTTCGGCCGCGTTGGGGTGGTCCAGCTGCTCCTCAGCAGCAATATGTGTGCGGCGCTGCTGGAGCCCCGGCCGGGAGACGCCACCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343516.8
ENST00000562055.1
CDS CAA 90 bp GGCAGCGGCACCTTCTTGGAGGTGGGTGTGGGCGAGCCCTGGAGCTaGGGCACAGGCTGCGTCAGGACGGGCTTGGGAGAGACAGGCGGC +
Preference number: 6 (lower is better)
Translates to: GSGTFLEVGVGEPWS*GTGCVRTGLGETGG
Trigger: GCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp TGCTTGGCCCGGATGCGCCTCTTGAGTGTGGCGCTGGCTTCCACCTaGGCCAAGGGCGGGCCTTCGACACCCGCCTCGCCCTTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: CLARMRLLSVALAST*AKGGPSTPASPLEG
Trigger: TCCCTCCAAGGGCGAGGCGGGTGTCGAAGGCCCGCCCTTGGCCAAGGTGGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp CCTGCTCCGAGGCCGGTCGGCGGCGCACGGTGCCAGTaGCATTATGGTACACGGACAGTGGCGGTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PAPRPVGGARCQ*HYGTRTVAVVA
Trigger: AGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGCCGCCGACCGGCCTCGGAGCAGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp GTGGGTGTGGGCGAGCCCTGGAGCTTGGGCACAGGCTaGGTCAGGACGGGCTTGGGAGAGACAGGCGGCTTG +
Preference number: 6 (lower is better)
Translates to: VGVGEPWSLGTG*VRTGLGETGGL
Trigger: CAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CCAGGAGGTACTCCTGGCTTCGAGACATGGGGCTGCTaGGCCCAGGGGGCCCATCTCCCAGCAGCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: PGGTPGFETWGC*AQGAHLPAAPA
Trigger: CGCAGGAGCTGCTGGGAGATGGGCCCCCTGGGCCCAGCAGCCCCATGTCTCGAAGCCAGGAGTACCTCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CCTGGAGCTTGGGCACAGGCTGCGTCAGGACGGGCTTaGGAGAGACAGGCGGCTTGGCCGGCTTCCGGGCTT +
Preference number: 6 (lower is better)
Translates to: PGAWAQAASGRA*ERQAAWPASGL
Trigger: AAGCCCGGAAGCCGGCCAAGCCGCCTGTCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CAGGGCCTGGCAGCGGCACCTTCTTGGAGGTGGGTGTaGGCGAGCCCTGGAGCTTGGGCACAGGCTGCGTCA +
Preference number: 6 (lower is better)
Translates to: QGLAAAPSWRWV*ASPGAWAQAAS
Trigger: TGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGTGCCGCTGCCAGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp TCAGGCTCGGCGTCAGGCACCGGCTCATCCGCCAGGTaGGCACTAGCCAGGGCCGAGCTGGAGCGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: SGSASGTGSSAR*ALARAELERLG
Trigger: ACCCAAGCGCTCCAGCTCGGCCCTGGCTAGTGCCAACCTGGCGGATGAGCCGGTGCCTGACGCCGAGCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp TACACGGACAGTGGCGGTGGTGGCTCAGGCCCGGCCTCCCGCTCCTaGGCCTTGGGCCTGCGCTTGACCGTGTCAGACTCGGTCAGGATG +
Preference number: 6 (lower is better)
Translates to: YTDSGGGGSGPASRS*ALGLRLTVSDSVRM
Trigger: CATCCTGACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS TCA 72 bp GCCGGGGCTCCAGCAGCGCCGCACACATATTGCTGCTaGGGAGCAGCTGGACCACCCCAACGCGGCCGAACT +
Preference number: 6 (lower is better)
Translates to: AGAPAAPHTYCC*GAAGPPQRGRT
Trigger: AGTTCGGCCGCGTTGGGGTGGTCCAGCTGCTCCTCAGCAGCAATATGTGTGCGGCGCTGCTGGAGCCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343516.8
ENST00000562055.1
CDS GCA 72 bp CGAACATGCTGCCGATGTCGTCCAGGATGCTGCCAGTaGTCTTTTCCGCCGCCGAGTCGCGCGGGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: RTCCRCRPGCCQ*SFPPPSRAGPA
Trigger: CGCAGGGCCCGCGCGACTCGGCGGCGGAAAAGAGCACTGGCAGCATCCTGGACGACATCGGCAGCATGTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp TGCGGCGCCGGTTCACCACCTCCCCGCCAGGCCCGATaGCCTCTTTGTGTTTCACTGAGGCCAGCACGGTGG +
Preference number: 6 (lower is better)
Translates to: CGAGSPPPRQAR*PLCVSLRPARW
Trigger: CCACCGTGCTGGCCTCAGTGAAACACAAAGAGGCCATCGGGCCTGGCGGGGAGGTGGTGAACCGGCGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GCCAGTGCCATTATGGTACACGGACAGTGGCGGTGGTaGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTTGGG +
Preference number: 6 (lower is better)
Translates to: ASAIMVHGQWRW*LRPGLPLLGLG
Trigger: CCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GCGCACGGTGCCAGTGCCATTATGGTACACGGACAGTaGCGGTGGTGGCTCAGGCCCGGCCTCCCGCTCCTT +
Preference number: 6 (lower is better)
Translates to: AHGASAIMVHGQ*RWWLRPGLPLL
Trigger: AAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACCGTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp GGCCGCACGGCAAAGGACTGGCTGCGGTTGACGTTCTaGTCGGCACCTGCGGGCGCCCTCACTGAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GRTAKDWLRLTF*SAPAGALTEWL
Trigger: CAGCCACTCAGTGAGGGCGCCCGCAGGTGCCGACAAGAACGTCAACCGCAGCCAGTCCTTTGCCGTGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp CGGTTCACCACCTCCCCGCCAGGCCCGATGGCCTCTTaGTGTTTCACTGAGGCCAGCACGGTGGCCACCCGG +
Preference number: 6 (lower is better)
Translates to: RFTTSPPGPMAS*CFTEASTVATR
Trigger: CCGGGTGGCCACCGTGCTGGCCTCAGTGAAACACAAAGAGGCCATCGGGCCTGGCGGGGAGGTGGTGAACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GACAGTGGCGGTGGTGGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTaGGGCCTGCGCTTGACCGTGTCAGACTCGGTCAGGATGAACTTG +
Preference number: 6 (lower is better)
Translates to: DSGGGGSGPASRSLA*GLRLTVSDSVRMNL
Trigger: CAAGTTCATCCTGACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp AGGACAGCTCCAGCATGGCCGCGATGCTCTTCACACTaGCGGCACTACCCGTGTCCACGCTGCCGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RTAPAWPRCSSH*RHYPCPRCRPG
Trigger: ACCTGGCCGGCAGCGTGGACACGGGTAGTGCCGGCAGTGTGAAGAGCATCGCGGCCATGCTGGAGCTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp AGCGCAGCCTCGTGCAGGGCCGTGCCGGACTTGGTCTaGCGGTTAATGTCGATGCCGGCTTGGAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: SAASCRAVPDLV*RLMSMPAWRRS
Trigger: GCTCCTCCTCCAAGCCGGCATCGACATTAACCGCCAGACCAAGTCCGGCACGGCCCTGCACGAGGCTGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GGTGCCAGTGCCATTATGGTACACGGACAGTGGCGGTaGTGGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: GASAIMVHGQWR*WLRPGLPLLGL
Trigger: AAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACCACCGCCACTGTCCGTGTACCATAATGGCACTGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CCTTCTTGGAGGTGGGTGTGGGCGAGCCCTGGAGCTTaGGCACAGGCTGCGTCAGGACGGGCTTGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: PSWRWVWASPGA*AQAASGRAWER
Trigger: TCTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp GGCCCGGCCTCCCGCTCCTTGGCCTTGGGCCTGCGCTaGACCGTGTCAGACTCGGTCAGGATGAACTTGACG +
Preference number: 6 (lower is better)
Translates to: GPASRSLALGLR*TVSDSVRMNLT
Trigger: CGTCAAGTTCATCCTGACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp ACCTTCTTGGAGGTGGGTGTGGGCGAGCCCTGGAGCTaGGGCACAGGCTGCGTCAGGACGGGCTTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: TFLEVGVGEPWS*GTGCVRTGLGE
Trigger: CTCTCCCAAGCCCGTCCTGACGCAGCCTGTGCCCAAGCTCCAGGGCTCGCCCACACCCACCTCCAAGAAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp TCCACAGCGGCCTGGGCCTCCAGCAGCAGGCTGATCAATTCCGTGTaGCCGTTCAGGGCCGCATGGTGCAGAGCCGAGAAGCCATCCGGG +
Preference number: 6 (lower is better)
Translates to: STAAWASSSRLINSV*PFRAAWCRAEKPSG
Trigger: CCCGGATGGCTTCTCGGCTCTGCACCATGCGGCCCTGAACGGCAACACGGAATTGATCAGCCTGCTGCTGGAGGCCCAGGCCGCTGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GGTGGCTCAGGCCCGGCCTCCCGCTCCTTGGCCTTGGGCCTGCGCTaGACCGTGTCAGACTCGGTCAGGATGAACTTGACGTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GGSGPASRSLALGLR*TVSDSVRMNLTFSC
Trigger: GCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGGCCAAGGAGCGGGAGGCCGGGCCTGAGCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS TCA 72 bp TCTCCTGCTGGTTCTGCTTGGCCCGGATGCGCCTCTTaGGTGTGGCGCTGGCTTCCACCTTGGCCAAGGGCG +
Preference number: 6 (lower is better)
Translates to: SPAGSAWPGCAS*VWRWLPPWPRA
Trigger: CGCCCTTGGCCAAGGTGGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp AGCCCACCCGGTCATTGCCCGTCCGGTTGTCATGGATaGAGCCCTTCCACCGGCCATCCGGATGCTGCTCGA +
Preference number: 6 (lower is better)
Translates to: SPPGHCPSGCHG*SPSTGHPDAAR
Trigger: TCGAGCAGCATCCGGATGGCCGGTGGAAGGGCTGCATCCATGACAACCGGACGGGCAATGACCGGGTGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp GGGCTGTCCCCCGGGCCGGACTCAGAGACGGACTTCTaGGAAAGCACCGTTGCCAGGAGCTTGACGCCTTCA +
Preference number: 6 (lower is better)
Translates to: GLSPGPDSETDF*ESTVARSLTPS
Trigger: TGAAGGCGTCAAGCTCCTGGCAACGGTGCTTTCCCAGAAGTCCGTCTCTGAGTCCGGCCCGGGGGACAGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CAGCCACACGGCCAGGTTAGCCTTGCCCTCCGATGCTaGCTCCAGCTTCTTGGGCGGCTGCTCCCCATAGAC +
Preference number: 6 (lower is better)
Translates to: QPHGQVSLALRC*LQLLGRLLPID
Trigger: GTCTATGGGGAGCAGCCGCCCAAGAAGCTGGAGCCAGCATCGGAGGGCAAGGCTAACCTGGCCGTGTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564289.1
CDS CAA 72 bp GCCTGGGCCTCCAGCAGCAGGCTGATCAATTCCGTGTaGCCGTTCAGGGCCGCATGGTGCAGAGCCGAGAAG +
Preference number: 6 (lower is better)
Translates to: AWASSSRLINSV*PFRAAWCRAEK
Trigger: CTTCTCGGCTCTGCACCATGCGGCCCTGAACGGCAACACGGAATTGATCAGCCTGCTGCTGGAGGCCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp TTCTCCTGCTGGTTCTGCTTGGCCCGGATGCGCCTCTaGAGTGTGGCGCTGGCTTCCACCTTGGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: FSCWFCLARMRL*SVALASTLAKG
Trigger: GCCCTTGGCCAAGGTGGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp AACTTGACGTTCTCCTGCTGGTTCTGCTTGGCCCGGATGCGCCTCTaGAGTGTGGCGCTGGCTTCCACCTTGGCCAAGGGCGGGCCTTCG +
Preference number: 6 (lower is better)
Translates to: NLTFSCWFCLARMRL*SVALASTLAKGGPS
Trigger: CGAAGGCCCGCCCTTGGCCAAGGTGGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp GCCTTGGGCCTGCGCTTGACCGTGTCAGACTCGGTCAGGATGAACTaGACGTTCTCCTGCTGGTTCTGCTTGGCCCGGATGCGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ALGLRLTVSDSVRMN*TFSCWFCLARMRLL
Trigger: CAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGACACGGTCAAGCGCAGGCCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp CTGATCAATTCCGTGTTGCCGTTCAGGGCCGCATGGTaGAGAGCCGAGAAGCCATCCGGGTCCTGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: LINSVLPFRAAW*RAEKPSGSWKL
Trigger: CAACTTCCAGGACCCGGATGGCTTCTCGGCTCTGCACCATGCGGCCCTGAACGGCAACACGGAATTGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp CTGATGATGTCGATGTGGCCGTTTTTAGCTGCGAGGTaGAAAGGGCTGGTGCCGTTGGGGTCGGTGGCGTCT +
Preference number: 6 (lower is better)
Translates to: LMMSMWPFLAAR*KGLVPLGSVAS
Trigger: AGACGCCACCGACCCCAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343516.8
ENST00000562055.1
CDS GCA 72 bp GAGGAGCCTGATGATGTCGATGTGGCCGTTTTTAGCTaGGAGGTGCAAAGGGCTGGTGCCGTTGGGGTCGGT +
Preference number: 6 (lower is better)
Translates to: EEPDDVDVAVFS*EVQRAGAVGVG
Trigger: ACCGACCCCAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp TTGTCATGGATGCAGCCCTTCCACCGGCCATCCGGATaGTGCTCGAGGACTGTGATGATGTCCCCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: LSWMQPFHRPSG*CSRTVMMSPAF
Trigger: GAAGGCAGGGGACATCATCACAGTCCTCGAGCAGCATCCGGATGGCCGGTGGAAGGGCTGCATCCATGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 72 bp GTCAGGATGAACTTGACGTTCTCCTGCTGGTTCTGCTaGGCCCGGATGCGCCTCTTGAGTGTGGCGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VRMNLTFSCWFC*ARMRLLSVALA
Trigger: AGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CAA 90 bp TCAGACTCGGTCAGGATGAACTTGACGTTCTCCTGCTGGTTCTGCTaGGCCCGGATGCGCCTCTTGAGTGTGGCGCTGGCTTCCACCTTG +
Preference number: 6 (lower is better)
Translates to: SDSVRMNLTFSCWFC*ARMRLLSVALASTL
Trigger: CAAGGTGGAAGCCAGCGCCACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp GCTCTACCTGATGATGTCGATGTGGCCGTTTTTAGCTaGGAGGTGCAAAGGGCTGGTGCCGTTGGGGTCGGT +
Preference number: 6 (lower is better)
Translates to: ALPDDVDVAVFS*EVQRAGAVGVG
Trigger: ACCGACCCCAACGGCACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGTAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562055.1
CDS CCA 72 bp ATGCCGGCTTGGAGGAGGAGCCTGATGATGTCGATGTaGCCGTTTTTAGCTGCGAGGTGCAAAGGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: MPAWRRSLMMSM*PFLAARCKGLV
Trigger: CACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGCTCCTCCTCCAAGCCGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp CCTCCCTGCTACCGGCTCTACCTGATGATGTCGATGTaGCCGTTTTTAGCTGCGAGGTGCAAAGGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PPCYRLYLMMSM*PFLAARCKGLV
Trigger: CACCAGCCCTTTGCACCTCGCAGCTAAAAACGGCCACATCGACATCATCAGGTAGAGCCGGTAGCAGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562055.1
CDS CAA 72 bp CTGCGCTTGACCGTGTCAGACTCGGTCAGGATGAACTaGACGTTCTCCTGCTGGTTCTGCTTGGCCCGGATG +
Preference number: 6 (lower is better)
Translates to: LRLTVSDSVRMN*TFSCWFCLARM
Trigger: CATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGACACGGTCAAGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp GTGTCAGACTCGGTCAGGATGAACTTGACGTTCTCCTaGTGGTTCTGCTTGGCCCGGATGCGCCTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: VSDSVRMNLTFS*WFCLARMRLLS
Trigger: ACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS CCA 72 bp TCAGACTCGGTCAGGATGAACTTGACGTTCTCCTGCTaGTTCTGCTTGGCCCGGATGCGCCTCTTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: SDSVRMNLTFSC*FCLARMRLLSV
Trigger: CACACTCAAGAGGCGCATCCGGGCCAAGCAGAACCAGCAGGAGAACGTCAAGTTCATCCTGACCGAGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343516.8
CDS GCA 72 bp ATCCGGATGCTGCTCGAGGACTGTGATGATGTCCCCTaGCTTCACGTTGAGGCTGGTCAGGTCGTAATTGTT +
Preference number: 6 (lower is better)
Translates to: IRMLLEDCDDVP*LHVEAGQVVIV
Trigger: AACAATTACGACCTGACCAGCCTCAACGTGAAGGCAGGGGACATCATCACAGTCCTCGAGCAGCATCCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343516.8