RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASK (Homo sapiens)

Ensembl gene IDs: ENSG00000147044

Ensembl transcript IDs: ENST00000378154.3, ENST00000378158.6, ENST00000378163.7, ENST00000378166.9, ENST00000378168.8, ENST00000378179.9, ENST00000421587.8, ENST00000442742.7, ENST00000468986.7, ENST00000472704.3, ENST00000477823.1, ENST00000486402.1, ENST00000642361.2, ENST00000642499.1, ENST00000642584.1, ENST00000642641.1, ENST00000643043.2, ENST00000643733.1, ENST00000643831.2, ENST00000643853.1, ENST00000644219.1, ENST00000644347.1, ENST00000644770.1, ENST00000645566.1, ENST00000645937.2, ENST00000645986.2, ENST00000646087.2, ENST00000646120.2, ENST00000647118.2, ENST00000675354.1

Found 2246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGAAGGAGAGACCACAGGTGGCCTCCAGTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTC +
Preference number: 1 (lower is better)
Translates to: EEGETTGGLQYTRGP*AHGSVRVRRGPAVL
Trigger: GAGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGGCCACCTGTGGTCTCTCCTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp ACAGCAAGAGGAAGGAGAGACCACAGGTGGCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGC +
Preference number: 1 (lower is better)
Translates to: TARGRRDHRWPPVHP*PLGAWLCASQTWSS
Trigger: GCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGGCCACCTGTGGTCTCTCCTTCCTCTTGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp GTACACCCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCAGGCTACTTTGTCACCCTGCCAACT +
Preference number: 1 (lower is better)
Translates to: VHPWPLGAWLCASQT*SSCALAGYFVTLPT
Trigger: AGTTGGCAGGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp TGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCCTGCCAACTGATACTCACTCCTGGG +
Preference number: 1 (lower is better)
Translates to: WAHGSVRVRRGPAVL*QATLSPCQLILTPG
Trigger: CCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp GCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGTTTCTGTaGGCTCTGTCTGCCCACCTGCTGCACAAAGCAAGGCAGGGGAAA +
Preference number: 1 (lower is better)
Translates to: AGPRDGAALFLLLFL*ALSAHLLHKARQGK
Trigger: TTTCCCCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAGCCCACAGAAACAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 90 bp AGATGGTGCGGCCCTCTTTCTACTTCTGTTTCTGTGGGCTCTGTCTaGCCACCTGCTGCACAAAGCAAGGCAGGGGAAAGACCGGATGGG +
Preference number: 1 (lower is better)
Translates to: RWCGPLSTSVSVGSV*PPAAQSKAGERPDG
Trigger: CCCATCCGGTCTTTCCCCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAGCCCACAGAAACAGAAGTAGAAAGAGGGCCGCACCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 90 bp CGGCCCTCTTTCTACTTCTGTTTCTGTGGGCTCTGTCTGCCCACCTaGTGCACAAAGCAAGGCAGGGGAAAGACCGGATGGGAACATGGT +
Preference number: 1 (lower is better)
Translates to: RPSFYFCFCGLCLPT*CTKQGRGKTGWEHG
Trigger: ACCATGTTCCCATCCGGTCTTTCCCCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAGCCCACAGAAACAGAAGTAGAAAGAGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp ATGGCAGATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTaGGCTCAAAGGGCAAGTGGGGGCGTGGGGGTTTCCACTAGAGGG +
Preference number: 1 (lower is better)
Translates to: MADGLRQASSASLEM*AQRASGGVGVSTRG
Trigger: CCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATCTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp TACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATTaGGCGGCCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGC +
Preference number: 1 (lower is better)
Translates to: YTAIKHDTRVLARED*AAFTSVTLPAAPGS
Trigger: GCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGGCCGCCCAATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp CATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAAGTGGGGGCGTaGGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGT +
Preference number: 1 (lower is better)
Translates to: HQHLWRCGLKGQVGA*GFPLEGGKFLFPMC
Trigger: ACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp GTGGTCCAGCTGTGCTCTGGCAGGCTACTTTGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCTAACA +
Preference number: 1 (lower is better)
Translates to: VVQLCSGRLLCHPAN*YSLLGLQRFNEHLT
Trigger: TGTTAGATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 90 bp GGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTaGGACATCTTTAGATATTCTGCCACCAATAGGATGGGCTGGGAC +
Preference number: 1 (lower is better)
Translates to: GEQEHLLHFYCSGGL*DIFRYSATNRMGWD
Trigger: GTCCCAGCCCATCCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp TTACAAAGAATCCAAACCTTTCCAATCCCTTCAGCTCCTGGGTGTTaGGGGACACCTCCTGCACAAACGCTCTTGCAAGCTAAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: LQRIQTFPIPSAPGC*GTPPAQTLLQAKAL
Trigger: CAGAGCCTTAGCTTGCAAGAGCGTTTGTGCAGGAGGTGTCCCTCAACACCCAGGAGCTGAAGGGATTGGAAAGGTTTGGATTCTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp GGTGTTCCAACACGTCCTCCAGCTACAAGTCCAGACTCCCCTAATTaGATAGCTACCCCAAAGCCTCCAAGTTTAACAGGTGCCGAGTTT +
Preference number: 1 (lower is better)
Translates to: GVPTRPPATSPDSPN*IATPKPPSLTGAEF
Trigger: AAACTCGGCACCTGTTAAACTTGGAGGCTTTGGGGTAGCTATTCAATTAGGGGAGTCTGGACTTGTAGCTGGAGGACGTGTTGGAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR GCA 90 bp TGCATGCAGGGATTTCACCATCGGAATGATGGCAAGAATGATGCCTaGCTGTGTGCTTCTCAGAGGACGTATAAAGCCACTGAGGATGAG +
Preference number: 1 (lower is better)
Translates to: CMQGFHHRNDGKNDA*LCASQRTYKATEDE
Trigger: CTCATCCTCAGTGGCTTTATACGTCCTCTGAGAAGCACACAGGCAGGCATCATTCTTGCCATCATTCCGATGGTGAAATCCCTGCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 90 bp GACGTCTACAGGCTTTCCGTAAGGCTCTCTTTTGACCACTTCTGGTaGCATAAAATGAGGTGTTCCAACACGTCCTCCAGCTACAAGTCC +
Preference number: 1 (lower is better)
Translates to: DVYRLSVRLSFDHFW*HKMRCSNTSSSYKS
Trigger: GGACTTGTAGCTGGAGGACGTGTTGGAACACCTCATTTTATGGCACCAGAAGTGGTCAAAAGAGAGCCTTACGGAAAGCCTGTAGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR CCA 90 bp CCAGACGTCTACAGGCTTTCCGTAAGGCTCTCTTTTGACCACTTCTaGTGCCATAAAATGAGGTGTTCCAACACGTCCTCCAGCTACAAG +
Preference number: 1 (lower is better)
Translates to: PDVYRLSVRLSFDHF*CHKMRCSNTSSSYK
Trigger: CTTGTAGCTGGAGGACGTGTTGGAACACCTCATTTTATGGCACCAGAAGTGGTCAAAAGAGAGCCTTACGGAAAGCCTGTAGACGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR TCA 90 bp GGAATACTATGGAGTTTCTCTTCTTCCCCTGTCACACAAGATAACTaGTTAGGGTTTCATCAACTTGTACTGTGCCGGCAGCGCACCAGC +
Preference number: 1 (lower is better)
Translates to: GILWSFSSSPVTQDN*LGFHQLVLCRQRTS
Trigger: GCTGGTGCGCTGCCGGCACAGTACAAGTTGATGAAACCCTAATCAGTTATCTTGTGTGACAGGGGAAGAAGAGAAACTCCATAGTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 90 bp TCTAGCAGCCTAAGAAGGAATTGGACGGGGAACAGGAACACCTCCTaGATTTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATT +
Preference number: 1 (lower is better)
Translates to: SSSLRRNWTGNRNTS*ISTAVGDFATSLDI
Trigger: AATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAATTCCTTCTTAGGCTGCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 90 bp GTTGAGGGACACCTCCTGCACAAACGCTCTTGCAAGCTAAGGCTCTaGTGTACCCTGCAAATACTTACAATTGGATACGGTGAAATATAC +
Preference number: 1 (lower is better)
Translates to: VEGHLLHKRSCKLRL*CTLQILTIGYGEIY
Trigger: GTATATTTCACCGTATCCAATTGTAAGTATTTGCAGGGTACAGCAGAGCCTTAGCTTGCAAGAGCGTTTGTGCAGGAGGTGTCCCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 90 bp ACCTCTGGCAAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTaGAAGAATGTGACTTCATGGAAGAGTTATGAGATGGTTAATGTC +
Preference number: 1 (lower is better)
Translates to: TSGKESENPSPNLLY*KNVTSWKSYEMVNV
Trigger: GACATTAACCATCTCATAACTCTTCCATGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp TCACATGCTAATGAAAAACATTCTACTGACCTCTGGCAAAGAGTCTaGGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTGACTTC +
Preference number: 1 (lower is better)
Translates to: SHANEKHSTDLWQRV*EPQPESPVLEECDF
Trigger: GAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAGGTCAGTAGAATGTTTTTCATTAGCATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp TTTAGATATTCTGCCACCAATAGGATGGGCTGGGACGATGCCTTCTaGATGCAAATAGCAAGAAGTAGGTCAACCATTTGTTTTCCTCTC +
Preference number: 1 (lower is better)
Translates to: FRYSATNRMGWDDAF*MQIARSRSTICFPL
Trigger: GAGAGGAAAACAAATGGTTGACCTACTTCTTGCTATTTGCATTCAGAAGGCATCGTCCCAGCCCATCCTATTGGTGGCAGAATATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp AAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTaGCTTCATGGAAGAGTTATGAGATGGTTAATGTCTCTAAAGCAA +
Preference number: 1 (lower is better)
Translates to: KSLRTPARISCIGRM*LHGRVMRWLMSLKQ
Trigger: TTGCTTTAGAGACATTAACCATCTCATAACTCTTCCATGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp TCTATCAGATTCGAATCAGTTCTAACACAGCCCTACCCAACTCTTTaGAGGTTTCTCTCTCTATCTAGTGTGAGACCACTGTTGAGCTTA +
Preference number: 1 (lower is better)
Translates to: SIRFESVLTQPYPTL*RFLSLSSVRPLLSL
Trigger: TAAGCTCAACAGTGGTCTCACACTAGATAGAGAGAGAAACCTTCAAAGAGTTGGGTAGGGCTGTGTTAGAACTGATTCGAATCTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 90 bp GGTGGGGGAGAGAACCTTCAAAATGTGGCTCTCCAATACTTCAATTaGCCACTAATAAGATTTAGTACTCTAAACATTCATTCTGGTCTT +
Preference number: 1 (lower is better)
Translates to: GGGENLQNVALQYFN*PLIRFSTLNIHSGL
Trigger: AAGACCAGAATGAATGTTTAGAGTACTAAATCTTATTAGTGGTCAATTGAAGTATTGGAGAGCCACATTTTGAAGGTTCTCTCCCCCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGGCTCAAAGGGCAAGTaGGGGCGTGGGGGTTTCCAC +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAGSKGK*GRGGFH
Trigger: GTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGA +
Preference number: 2 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRYTRGP*AHGSVR
Trigger: TCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 90 bp AGAGGAAGGAGAGACCACAGGTGGCCTCCAGTACACCCGTGGCCCTaGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: RGRRDHRWPPVHPWP*GAWLCASQTWSSCA
Trigger: AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGGCCACCTGTGGTCTCTCCTTCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACAGGTTCGAGGGAGTTaGTGGAGGGTCAGACGAGAG +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAQVRGS*WRVRRE
Trigger: CTCTCGTCTGACCCTCCATCAACTCCCTCGAACCTG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTTGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: PWPLGAWLCASQTWSSCACHPAN*YSLLGL
Trigger: AAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACA...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACTCTGGCAAAGAGTCTaGGAACCCCAGCCCGAATCT +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPALWQRV*EPQPES
Trigger: AGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGACGTGGTCCAGCTGTaGTCTGGCAGGCTACTTTGT +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPADVVQL*SGRLLC
Trigger: ACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGCTCAGAACACACCCTaGACATCCTGCCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAAQNTP*TSCQGT
Trigger: TGTGCCTTGGCAGGATGTGCAGGGTGTGTTCTGAGC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACCTGGGTGTGCCCCATaGACGGAATGTAGAATGTAC +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAPGCAP*TECRMY
Trigger: GTACATTCTACATTCCGTTCATGGGGCACACCCAGG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGGACGTGGTCCAGCTGTaGTCTGGCAGGCTACTTTGT +
Preference number: 2 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRDVVQL*SGRLLC
Trigger: ACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTC...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATCTGGTTTGGTGGCTTaGTCACCCCACTGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQSGLVA*SPHCGA
Trigger: GGCCCCACAGTGGGGTGACCAAGCCACCAAACCAGA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATCAGCTCCTGGGTGTTaGGGGACACCTCCTGCACAA +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQSAPGC*GTPPAQ
Trigger: TTGTGCAGGAGGTGTCCCTCAACACCCAGGAGCTGA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 90 bp GGTTTCATCAACTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTaGTTCCGGCGACAGGGCAAAGGGATCAGGATGGGAGGGCGTGTG +
Preference number: 2 (lower is better)
Translates to: GFINLYCAGSAPAFW*FRRQGKGIRMGGRV
Trigger: CACACGCCCTCCCATCCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAGTTGATGAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGGCTTTTCCACAAATaGGGTGCTCCCAGTTATGCT +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPARLFHK*GAPSYA
Trigger: AGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTGCTACTTTGTCACCCTaGCAACTGATACTCACTCCT +
Preference number: 2 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAATLSP*QLILTP
Trigger: AGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGC...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGCTCAGAACACACCCTaGACATCCTGCCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQAQNTP*TSCQGT
Trigger: TGTGCCTTGGCAGGATGTGCAGGGTGTGTTCTGAGC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATTTGCTCAGTCCATTTaGACAGGTTCGAGGGAGTTG +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAFAQSI*TGSREL
Trigger: CAACTCCCTCGAACCTGTGCAAATGGACTGAGCAAA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAAAGAGAGCTGGCTTTaGGCTGCCTTGTTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAKESWL*AALFFR
Trigger: CCTGAAAAACAAGGCAGCCCAAAGCCAGCTCTCTTT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGAGGCTTTTCCACAAATaGGGTGCTCCCAGTTATGCT +
Preference number: 2 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRRLFHK*GAPSYA
Trigger: AGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATCAATGAGTTCTGCATaGAGGGATTTCACCATCGGA +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPASMSSA*RDFTIG
Trigger: TCCGATGGTGAAATCCCTGCATGCAGAACTCATTGA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATTGAGGGACACCTCCTaGACAAACGCTCTTGCAAGC +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQLRDTS*TNALAS
Trigger: GCTTGCAAGAGCGTTTGTGCAGGAGGTGTCCCTCAA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAACTGATACTCACTCCTaGGCCTTCAAAGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPATDTHS*AFKGSM
Trigger: CATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGA +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGYTRGP*AHGSVR
Trigger: TCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTA...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGGGCTCAAAGGGCAAGTaGGGGCGTGGGGGTTTCCAC +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLGSKGK*GRGGFH
Trigger: GTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCC...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGATGGAGTTGTGCTTaGGGCCAGAAAGGAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRWSCA*GQKGGL
Trigger: GAGACCTCCTTTCTGGCCCCAAGCACAACTCCATCT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGGGAGCCACTCACTGTaGAGGAATGCCTGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQGSHSL*RNACFC
Trigger: ACAGAAACAGGCATTCCTCCACAGTGAGTGGCTCCC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGTGCTCCCAGTTATaGTCAGATATCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRCSQL*SDIWGE
Trigger: CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAACCTTGTTAGTAAGTTaGAGACTCATCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPATLLVS*RLIWSL
Trigger: CAGTGACCAGATGAGTCTGCAACTTACTAACAAGGT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGAAGTCAATGAGTTCTaGATGCAGGGATTTCACCAT +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAEVNEF*MQGFHH
Trigger: ATGGTGAAATCCCTGCATGCAGAACTCATTGACTTC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGATGGGCTGGGACGATaGCTTCTGAATGCAAATAGC +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQDGLGR*LLNANS
Trigger: GCTATTTGCATTCAGAAGGCATCGTCCCAGCCCATC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGTGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLCASQT*SSCALA
Trigger: TGCCAGAGCACAGCTGGACCACGTCTGACTCGCACA...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGGGGCAAGTGGGGGCGTaGGGGTTTCCACTAGAGGGA +
Preference number: 2 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLGQVGA*GFPLEG
Trigger: TCCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCC...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGGGACAAAAGAGAGCTaGCTTTGGGCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQGTKES*LWAALF
Trigger: AAACAAGGCAGCCCAAAGCCAGCTCTCTTTTGTCCC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 90 bp TCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCTGGCAGGCTACTTaGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTT +
Preference number: 2 (lower is better)
Translates to: SVRVRRGPAVLWQAT*SPCQLILTPGPSKV
Trigger: AACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTCTGACTCGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGCAGCAGCAATGTACTaGAATTACTCTGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAAAAMY*NYSEFR
Trigger: TCTGAATTCAGAGTAATTTCAGTACATTGCTGCTGC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACATTTAAGTTGGCATTaGTTTTCTCCTCCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAHLSWH*FSPPLL
Trigger: AAGCAGAGGAGGAGAAAAGCAATGCCAACTTAAATG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGCTTGGTTTTGGAATaGCGATTCCAAGGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQSLVLE*RFQGAF
Trigger: GAAGGCACCTTGGAATCGGCATTCCAAAACCAAGCT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGTGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLCASQT*SSCALA
Trigger: TGCCAGAGCACAGCTGGACCACGTCTGACTCGCACA...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACACCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGCATTTCTACTGCAGTaGGGGACTTTGCGACATCTT +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQAFLLQ*GTLRHL
Trigger: AAGATGTCGCAAAGTCCCCCACTGCAGTAGAAATGC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGACGTGGTCCAGCTGTaGTCTGGCAGGCTACTTTGT +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGDVVQL*SGRLLC
Trigger: ACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGGGCAAGAATGATGCCTaGCTGTGTGCTTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLGKNDA*LCASQR
Trigger: CCTCTGAGAAGCACACAGGCAGGCATCATTCTTGCC...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATCAATGAGTTCTGCATaGAGGGATTTCACCATCGGA +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQSMSSA*RDFTIG
Trigger: TCCGATGGTGAAATCCCTGCATGCAGAACTCATTGA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGTGTGGGGAATGGAGTTaGGTGGGGGAGAGAACCTTC +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLCGEWS*VGERTF
Trigger: GAAGGTTCTCTCCCCCACCCAACTCCATTCCCCACA...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGCTCCCTTTCTTGCTGTaGGGAATGGAGTTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLLPFLL*GMELGG
Trigger: CCCACCCAACTCCATTCCCCACAGCAAGAAAGGGAG...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCCCTGGGTGTGCCCCATaGACGGAATGTAGAATGTAC +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGPGCAP*TECRMY
Trigger: GTACATTCTACATTCCGTTCATGGGGCACACCCAGG...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGCTTCCTGGATGTAGGTaGCAGCTAAACTTCACCCAC +
Preference number: 2 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLLPGCR*QLNFTH
Trigger: GTGGGTGAAGTTTAGCTGTCACCTACATCCAGGAAG...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATCAGGTTCGAGGGAGTTaGTGGAGGGTCAGACGAGAG +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDQVRGS*WRVRRE
Trigger: CTCTCGTCTGACCCTCCATCAACTCCCTCGAACCTG...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGGCTTTTCTCCTCCTCTaGTTAATCCACCTTTATAAA +
Preference number: 2 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRAFLLL*LIHLYK
Trigger: TTTATAAAGGTGGATTAAGCAGAGGAGGAGAAAAGC...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATCTCTGTCTGCCCACCTaGTGCACAAAGCAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDLCLPT*CTKQGR
Trigger: CCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAG...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAACCGAATCTCCTGTATTaGAAGAATGTGACTTCATGG +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQPNLLY*KNVTSW
Trigger: CCATGAAGTCACATTCTTCCAATACAGGAGATTCGG...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGGGCTCAAAGGGCAAGTaGGGGCGTGGGGGTTTCCAC +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRGSKGK*GRGGFH
Trigger: GTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCC...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGGCATCTCTGGAGATGTaGGCTCAAAGGGCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLASLEM*AQRASG
Trigger: CCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGC...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGCATCATCAGCATCTCTaGAGATGTGGGCTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLHHQHL*RCGLKG
Trigger: CCCTTTGAGCCCACATCTCCAGAGATGCTGATGATG...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGCGCTGGGAATCTTCCTaGAGGGTGGTTCAATTGACT +
Preference number: 2 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLRWESS*RVVQLT
Trigger: AGTCAATTGAACCACCCTCCAGGAAGATTCCCAGCG...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 90 bp AGGAATGCCTGTTTCTGTTCCCAAGGACAATTCTCGCTACAGAGGTaGTACTTCCTCTGGGTCCAGAGAGGGTCACCCCTAAGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: RNACFCSQGQFSLQR*YFLWVQRGSPLSLC
Trigger: ACAGAGGCTTAGGGGTGACCCTCTCTGGACCCAGAGGAAGTACAACCTCTGTAGCGAGAATTGTCCTTGGGAACAGAAACAGGCATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCGCTCAGAACACACCCTaGACATCCTGCCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: RNCGQYHTRNDCLALASIAQNTP*TSCQGT
Trigger: TGTGCCTTGGCAGGATGTGCAGGGTGTGTTCTGAGC...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATGCAGAGATGGAGTTGTaGTTGGGGCCAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDAEMEL*LGPERR
Trigger: CCTCCTTTCTGGCCCCAAGCACAACTCCATCTCTGC...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGTTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGT +
Preference number: 2 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLLVTPL*GPYRSS
Trigger: ACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAA...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCTTATCTCTGGTTTGGTaGCTTGGTCACCCCACTGTG +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGLSLVW*LGHPTV
Trigger: CACAGTGGGGTGACCAAGCCACCAAACCAGAGATAA...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCAGCTTATCTCTGGTTTaGTGGCTTGGTCACCCCACT +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGSLSLV*WLGHPT
Trigger: AGTGGGGTGACCAAGCCACCAAACCAGAGATAAGCT...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATAGGTTGTACTTCCTCTaGGTCCAGAGAGGGTCACCC +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDRLYFL*VQRGSP
Trigger: GGGTGACCCTCTCTGGACCCAGAGGAAGTACAACCT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATAGCAACAAGGACAGATaGTTCCCCTGTGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDSNKDR*FPCAKG
Trigger: TCCCTTGGCACAGGGGAATCATCTGTCCTTGTTGCT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATAAGCCAATCAAGCCATaGGCTTGGAGGAGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDKPIKP*AWRRVL
Trigger: CAGGACTCTCCTCCAAGCTCATGGCTTGATTGGCTT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGCTACTTTGTCACCCTaGCAACTGATACTCACTCCT +
Preference number: 2 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGATLSP*QLILTP
Trigger: AGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGAACAGGAACACCTCCTaGATTTCTACTGCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLNRNTS*ISTAVG
Trigger: CCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTT...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAAAAGGTAACAGTAGCTaGAGCCCAGGCCTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTKGNSS*SPGLPG
Trigger: TCCAGGCAGGCCTGGGCTGCAGCTACTGTTACCTTT...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTTGGCCCTTGGGCGCATaGCTCTGTGCGAGTCAGACG +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISWPLGA*LCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATTTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGT +
Preference number: 2 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYLVTPL*GPYRSS
Trigger: ACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAA...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCATTATCTCTGGTTTGGTaGCTTGGTCACCCCACTGTG +
Preference number: 2 (lower is better)
Translates to: DGLRQASSASLEMWAQRALSLVW*LGHPTV
Trigger: CACAGTGGGGTGACCAAGCCACCAAACCAGAGATAA...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCGGGCAAGTGGGGGCGTaGGGGTTTCCACTAGAGGGA +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTIGQVGA*GFPLEG
Trigger: TCCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCC...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATATAAATATGGCAGATaGCTTAAGACAGGCATCATC +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQYKYGR*LKTGII
Trigger: GATGATGCCTGTCTTAAGCCATCTGCCATATTTATA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 90 bp GCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTaGGCATCTATCAGATTCGAATCAGTTCTAACACAGCCCTACCCA +
Preference number: 2 (lower is better)
Translates to: ARNCGQYHTRNDCLA*ASIRFESVLTQPYP
Trigger: TGGGTAGGGCTGTGTTAGAACTGATTCGAATCTGATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTTGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVCHPAN*YSLLGL
Trigger: AAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACA...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTCTCTGGCAAAGAGTCTaGGAACCCCAGCCCGAATCT +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVLWQRV*EPQPES
Trigger: AGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAG...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATCTTCCTGGATGTAGGTaGCAGCTAAACTTCACCCAC +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDLPGCR*QLNFTH
Trigger: GTGGGTGAAGTTTAGCTGTCACCTACATCCAGGAAG...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp ATCAGCATGCGACGTACTAGGTCTTTGGCACTTTCAGAGATATGGCTCCACTGCCCAGACTCCCCTAATTaGATAGCTACCCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: ISMRRTRSLALSEIWLHCPDSPN*IATPKP
Trigger: AGGCTTTGGGGTAGCTATTCAATTAGGGGAGTCTGG...GCAGTGGAGCCATATCTCTGAAAGTGCCAAAGACCTAGTACGTCGCATGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR GCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCAGGTGCTCCCAGTTATaGTCAGATATCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSRCSQL*SDIWGE
Trigger: CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCT...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGTTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACACTCCTGCATTTCTACTaGAGTGGGGGACTTTGCGAC +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTLLHFY*SGGLCD
Trigger: GTCGCAAAGTCCCCCACTGCAGTAGAAATGCAGGAG...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGAAACTGATGTGTGTGTaGACAGGCAAAGCCAATCAA +
Preference number: 2 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLKLMCV*TGKANQ
Trigger: TTGATTGGCTTTGCCTGTGCACACACACATCAGTTT...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGATGGCCCTTGGGCGCATaGCTCTGTGCGAGTCAGACG +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRWPLGA*LCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGGAAGAGTTATGAGATaGTTAATGTCTCTAAAGCAA +
Preference number: 2 (lower is better)
Translates to: LVLCRQRTSILVVPATGQGRVMR*LMSLKQ
Trigger: TTGCTTTAGAGACATTAACCATCTCATAACTCTTCC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ACCGCACCCCCAGACGTCTACAGGCTTTCCGTAAGGCTCTCTTTTGACCACTTCGTCTCATATAATGGCTaGCTACAGCTTCACTGTACA +
Preference number: 2 (lower is better)
Translates to: TAPPDVYRLSVRLSFDHFVSYNG*LQLHCT
Trigger: TGTACAGTGAAGCTGTAGCCAGCCATTATATGAGAC...GAAGTGGTCAAAAGAGAGCCTTACGGAAAGCCTGTAGACGTCTGGGGGTGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATAGGCTTTTCCACAAATaGGGTGCTCCCAGTTATGCT +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDRLFHK*GAPSYA
Trigger: AGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGGGGACCATGACCTGCTaGCACAAGGCCGATAACAAA +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRGTMTC*HKADNK
Trigger: TTTGTTATCGGCCTTGTGTCAGCAGGTCATGGTCCC...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp AAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTGACTTCAAGCAACAAGGACAGATaGTTCCCCTGTGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: KESENPSPNLLYWKNVTSSNKDR*FPCAKG
Trigger: TCCCTTGGCACAGGGGAATCATCTGTCCTTGTTGCT...TGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGTCTTTGAGAAGTCAATaGGTTCTGCATGCAGGGATT +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLSLRSQ*VLHAGI
Trigger: AATCCCTGCATGCAGAACTCATTGACTTCTCAAAGA...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGTGGGACGATGCCTTCTaGATGCAAATAGCAAGAAGT +
Preference number: 2 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLWDDAF*MQIARS
Trigger: ACTTCTTGCTATTTGCATTCAGAAGGCATCGTCCCA...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GCTGGATCCAGCATCAGCATGCGACGTACTAGGTCTTTGGCACTTTCAGAGATATGCCGAGTTTTCTTTTaGGGCAAGGAGAACACAGTG +
Preference number: 2 (lower is better)
Translates to: AGSSISMRRTRSLALSEICRVFF*GKENTV
Trigger: CACTGTGTTCTCCTTGCCTCAAAAGAAAACTCGGCA...TATCTCTGAAAGTGCCAAAGACCTAGTACGTCGCATGCTGATGCTGGATCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR TCA 90 bp ATCCTTTCAGCTGGATCCAGCATCAGCATGCGACGTACTAGGTCTTTGGCACTTTCTGGTGCCATAAAATaGGGTGTTCCAACACGTCCT +
Preference number: 2 (lower is better)
Translates to: ILSAGSSISMRRTRSLALSGAIK*GVPTRP
Trigger: AGGACGTGTTGGAACACCTCATTTTATGGCACCAGA...AAGTGCCAAAGACCTAGTACGTCGCATGCTGATGCTGGATCCAGCTGAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR GCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCTCGCGACTGTCCACATaGATTAAGAGTCAAGACCCA +
Preference number: 2 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSSRLST*IKSQDP
Trigger: TGGGTCTTGACTCTTAATGCATGTGGACAGTCGCGA...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATGCTACTTTGTCACCCTaGCAACTGATACTCACTCCT +
Preference number: 2 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYATLSP*QLILTP
Trigger: AGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGC...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACACAGATGATTCCCCTGTaGCAAGGGATACAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTQMIPL*QGIQQE
Trigger: CTCTTGCTGTATCCCTTGGCACAGGGGAATCATCTG...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGACCTTGTTAGTAAGTTaGAGACTCATCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLTLLVS*RLIWSL
Trigger: CAGTGACCAGATGAGTCTGCAACTTACTAACAAGGT...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAAACAGGAACACCTCCTaGATTTCTACTGCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTNRNTS*ISTAVG
Trigger: CCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTT...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCTTATTCTTATTCCCCTaGGTGTGCCCCATGAACGGA +
Preference number: 2 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSLFLFP*VCPMNG
Trigger: TCCGTTCATGGGGCACACCCAGGGGAATAAGAATAA...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGACTGATACTCACTCCTaGGCCTTCAAAGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLTDTHS*AFKGSM
Trigger: CATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGT...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTGGCAAAGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 2 (lower is better)
Translates to: STSHPHMLMKNILLTSGKGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...TTTGCCAGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AATATAAGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 2 (lower is better)
Translates to: NISTSHPHMLMKNILLTSPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...AGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCTTATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGTTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGT +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRLVTPL*GPYRSS
Trigger: ACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAA...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAAAGAGCCCGAAATTGTaGTCAGTACCATACCAGGAA +
Preference number: 2 (lower is better)
Translates to: DGLRQASSASLEMWAQRAKSPKL*SVPYQE
Trigger: TTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACACATCATCAGCATCTCTaGAGATGTGGGCTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTHHQHL*RCGLKG
Trigger: CCCTTTGAGCCCACATCTCCAGAGATGCTGATGATG...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 90 bp GTCACCCCACTGTGGGGCCCATACAGAAGTAGTTCACTCAATACCTaGTTAGTAAGTTGCAGACTCATCTGGTCACTGGCAAAGAACAAC +
Preference number: 2 (lower is better)
Translates to: VTPLWGPYRSSSLNT*LVSCRLIWSLAKNN
Trigger: GTTGTTCTTTGCCAGTGACCAGATGAGTCTGCAACTTACTAACAAGGTATTGAGTGAACTACTTCTGTATGGGCCCCACAGTGGGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CAA 90 bp AAACTGATGTGTGTGTGCACAGGCAAAGCCAATCAAGCCATGAGCTaGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KLMCVCTGKANQAMS*EESPVSRDSKQRGK
Trigger: TTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCAAGCTCATGGCTTGATTGGCTTTGCCTGTGCACACACACATCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGACTGAGGCTTTTCCACAAATaGGGTGCTCCCAGTTATGCT +
Preference number: 2 (lower is better)
Translates to: YRLFCPTQTHRQHKRSRLRLFHK*GAPSYA
Trigger: AGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCT...CAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
3UTR-3UTR TCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCCTCTGGCAAAGAGTCTaGGAACCCCAGCCCGAATCT +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTILWQRV*EPQPES
Trigger: AGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAG...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTTGCCAAGGCACAAAGTaGCAAGGCCATCTAACCTAC +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVCQGTK*QGHLTY
Trigger: GTAGGTTAGATGGCCTTGTCACTTTGTGCCTTGGCA...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGCAGATGATTCCCCTGTaGCAAGGGATACAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRQMIPL*QGIQQE
Trigger: CTCTTGCTGTATCCCTTGGCACAGGGGAATCATCTG...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATACTGATACTCACTCCTaGGCCTTCAAAGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDTDTHS*AFKGSM
Trigger: CATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATACTGATACTCACTCCTaGGCCTTCAAAGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYTDTHS*AFKGSM
Trigger: CATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGT...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGATGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRCASQT*SSCALA
Trigger: TGCCAGAGCACAGCTGGACCACGTCTGACTCGCACA...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATAGTTGCAGACTCATCTaGTCACTGGCAAAGAACAAC +
Preference number: 2 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYSCRLI*SLAKNN
Trigger: GTTGTTCTTTGCCAGTGACCAGATGAGTCTGCAACT...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCAGTTGCAGACTCATCTaGTCACTGGCAAAGAACAAC +
Preference number: 2 (lower is better)
Translates to: RNCGQYHTRNDCLALASISCRLI*SLAKNN
Trigger: GTTGTTCTTTGCCAGTGACCAGATGAGTCTGCAACT...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTCCAGGAACGACTGTCTaGCCTTGGCATCTATCAGAT +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVPGTTV*PWHLSD
Trigger: ATCTGATAGATGCCAAGGCCAGACAGTCGTTCCTGG...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTGCATCTCTGGAGATGTaGGCTCAAAGGGCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISASLEM*AQRASG
Trigger: CCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGC...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTTGTGGGGAATGGAGTTaGGTGGGGGAGAGAACCTTC +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISCGEWS*VGERTF
Trigger: GAAGGTTCTCTCCCCCACCCAACTCCATTCCCCACA...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTCTCCCTTTCTTGCTGTaGGGAATGGAGTTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISLPFLL*GMELGG
Trigger: CCCACCCAACTCCATTCCCCACAGCAAGAAAGGGAG...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTCTGCCACCAATAGGATaGGCTGGGACGATGCCTTCT +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISLPPIG*AGTMPS
Trigger: AGAAGGCATCGTCCCAGCCCATCCTATTGGTGGCAG...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATGCTACAATGTTATCTTaGCACTGGGAAACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDATMLS*HWETSR
Trigger: TCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGC...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACATGGGACGATGCCTTCTaGATGCAAATAGCAAGAAGT +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTWDDAF*MQIARS
Trigger: ACTTCTTGCTATTTGCATTCAGAAGGCATCGTCCCA...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: RNCGQYHTRNDCLALASIFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTGACTTCATCGCGACTGTCCACATaGATTAAGAGTCAAGACCCA +
Preference number: 2 (lower is better)
Translates to: KESENPSPNLLYWKNVTSSRLST*IKSQDP
Trigger: TGGGTCTTGACTCTTAATGCATGTGGACAGTCGCGA...TGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTTCGCGACTGTCCACATaGATTAAGAGTCAAGACCCA +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVSRLST*IKSQDP
Trigger: TGGGTCTTGACTCTTAATGCATGTGGACAGTCGCGA...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAGACGTGGTCCAGCTGTaGTCTGGCAGGCTACTTTGT +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRDVVQL*SGRLLC
Trigger: ACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTC...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAAGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDEGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAGCTCAGAACACACCCTaGACATCCTGCCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRAQNTP*TSCQGT
Trigger: TGTGCCTTGGCAGGATGTGCAGGGTGTGTTCTGAGC...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGGCTTTTCTCCTCCTCTaGTTAATCCACCTTTATAAA +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLAFLLL*LIHLYK
Trigger: TTTATAAAGGTGGATTAAGCAGAGGAGGAGAAAAGC...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTGGCAAGAATGATGCCTaGCTGTGTGCTTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISGKNDA*LCASQR
Trigger: CCTCTGAGAAGCACACAGGCAGGCATCATTCTTGCC...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACATCAATGAGTTCTGCATaGAGGGATTTCACCATCGGA +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTSMSSA*RDFTIG
Trigger: TCCGATGGTGAAATCCCTGCATGCAGAACTCATTGA...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp ATCCTTTCAGCTGGATCCAGCATCAGCATGCGACGTACTAGGTCTTTGGCACTTTTTGACCACTTCTGGTaGCATAAAATGAGGTGTTCC +
Preference number: 2 (lower is better)
Translates to: ILSAGSSISMRRTRSLALFDHFW*HKMRCS
Trigger: GGAACACCTCATTTTATGGCACCAGAAGTGGTCAAA...AAGTGCCAAAGACCTAGTACGTCGCATGCTGATGCTGGATCCAGCTGAAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR CCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGTTATTCTTATTCCCCTaGGTGTGCCCCATGAACGGA +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRLFLFP*VCPMNG
Trigger: TCCGTTCATGGGGCACACCCAGGGGAATAAGAATAA...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGAGCAAATGCCTAAACTaGTTTCTTCATTGCACAGTA +
Preference number: 2 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLSKCLN*FLHCTV
Trigger: TACTGTGCAATGAAGAAACCAGTTTAGGCATTTGCT...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAACTGATACTCACTCCTaGGCCTTCAAAGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTTDTHS*AFKGSM
Trigger: CATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGT...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCCGAATCTCCTGTATTaGAAGAATGTGACTTCATGG +
Preference number: 2 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYPNLLY*KNVTSW
Trigger: CCATGAAGTCACATTCTTCCAATACAGGAGATTCGG...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAAGCAACAAGGACAGATaGTTCCCCTGTGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRSNKDR*FPCAKG
Trigger: TCCCTTGGCACAGGGGAATCATCTGTCCTTGTTGCT...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCATGTATTGGAAGAATGTaGCTTCATGGAAGAGTTATG +
Preference number: 2 (lower is better)
Translates to: DGLRQASSASLEMWAQRACIGRM*LHGRVM
Trigger: CATAACTCTTCCATGAAGTCACATTCTTCCAATACA...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTTGCCAAGGCACAAAGTaGCAAGGCCATCTAACCTAC +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISCQGTK*QGHLTY
Trigger: GTAGGTTAGATGGCCTTGTCACTTTGTGCCTTGGCA...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAGCTACAATGTTATCTTaGCACTGGGAAACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTATMLS*HWETSR
Trigger: TCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGC...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGTGGGACGATGCCTTCTaGATGCAAATAGCAAGAAGT +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRWDDAF*MQIARS
Trigger: ACTTCTTGCTATTTGCATTCAGAAGGCATCGTCCCA...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTGGCAAAAGGTGCTCCCAGTTATaGTCAGATATCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: STSHPHMLMKNILLTSGKRCSQL*SDIWGE
Trigger: CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCT...TTTGCCAGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGACTGTTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: YRLFCPTQTHRQHKRSRLFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...CAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
3UTR-3UTR GCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGGCTTTTCTCCTCCTCTaGTTAATCCACCTTTATAAA +
Preference number: 2 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLAFLLL*LIHLYK
Trigger: TTTATAAAGGTGGATTAAGCAGAGGAGGAGAAAAGC...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGATTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGT +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRLVTPL*GPYRSS
Trigger: ACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAA...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTCCAGGAACGACTGTCTaGCCTTGGCATCTATCAGAT +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISPGTTV*PWHLSD
Trigger: ATCTGATAGATGCCAAGGCCAGACAGTCGTTCCTGG...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTAAGAGCCCGAAATTGTaGTCAGTACCATACCAGGAA +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVKSPKL*SVPYQE
Trigger: TTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTGGGACAAAAGAGAGCTaGCTTTGGGCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISGTKES*LWAALF
Trigger: AAACAAGGCAGCCCAAAGCCAGCTCTCTTTTGTCCC...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTGTATTGGAAGAATGTaGCTTCATGGAAGAGTTATG +
Preference number: 2 (lower is better)
Translates to: RNCGQYHTRNDCLALASICIGRM*LHGRVM
Trigger: CATAACTCTTCCATGAAGTCACATTCTTCCAATACA...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGTTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAAAAATGCAAGGGATGTaGATAGGTTTACAACTTAGT +
Preference number: 2 (lower is better)
Translates to: DGLRQASSASLEMWAQRAKMQGM*IGLQLS
Trigger: ACTAAGTTGTAAACCTATGCACATCCCTTGCATTTT...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCGCTACTTTGTCACCCTaGCAACTGATACTCACTCCT +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTIATLSP*QLILTP
Trigger: AGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGC...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGGAAGTCAATGAGTTCTaGATGCAGGGATTTCACCAT +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNREVNEF*MQGFHH
Trigger: ATGGTGAAATCCCTGCATGCAGAACTCATTGACTTC...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAAAAACAAAAGAACTCTaGAGCGATCAGATCAAAGGC +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTKTKEL*SDQIKG
Trigger: GCCTTTGATCTGATCGCTGCAGAGTTCTTTTGTTTT...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAAGCTTATCTCTGGTTTaGTGGCTTGGTCACCCCACT +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRSLSLV*WLGHPT
Trigger: AGTGGGGTGACCAAGCCACCAAACCAGAGATAAGCT...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAATGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDECHPAN*YSLLGL
Trigger: AAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACA...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGAGGCGGGTATGGTGTTaGCAATGTAAAAGAAGTATA +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRRRVWC*QCKRSI
Trigger: TATACTTCTTTTACATTGTCAACACCATACCCGCCT...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GACTGTCCACATGCATTAAGAGTCAAGACCCAACTTCAAATCTCTAAAAGGTTTAGGTGCTCCCAGTTATaGTCAGATATCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: DCPHALRVKTQLQISKRFRCSQL*SDIWGE
Trigger: CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCT...AAACCTTTTAGAGATTTGAAGTTGGGTCTTGACTCTTAATGCATGTGGACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
3UTR-3UTR GCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGATCGCGACTGTCCACATaGATTAAGAGTCAAGACCCA +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRSRLST*IKSQDP
Trigger: TGGGTCTTGACTCTTAATGCATGTGGACAGTCGCGA...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAAGACGTGGTCCAGCTGTaGTCTGGCAGGCTACTTTGT +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDEDVVQL*SGRLLC
Trigger: ACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTC...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTTCAATGAGTTCTGCATaGAGGGATTTCACCATCGGA +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISSMSSA*RDFTIG
Trigger: TCCGATGGTGAAATCCCTGCATGCAGAACTCATTGA...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGATTATTCTTATTCCCCTaGGTGTGCCCCATGAACGGA +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRLFLFP*VCPMNG
Trigger: TCCGTTCATGGGGCACACCCAGGGGAATAAGAATAA...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAATTTAATAATAGGCGGTaGGGGGCGGAGGCGGGTATG +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDEFNNRR*GAEAGM
Trigger: CATACCCGCCTCCGCCCCCCACCGCCTATTATTAAA...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCAGTTGCAGACTCATCTaGTCACTGGCAAAGAACAAC +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTISCRLI*SLAKNN
Trigger: GTTGTTCTTTGCCAGTGACCAGATGAGTCTGCAACT...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCAAGAGCCCGAAATTGTaGTCAGTACCATACCAGGAA +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTIKSPKL*SVPYQE
Trigger: TTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAAGCATCTCTGGAGATGTaGGCTCAAAGGGCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDEASLEM*AQRASG
Trigger: CCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGC...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTTCTTTGAGAAGTCAATaGGTTCTGCATGCAGGGATT +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISSLRSQ*VLHAGI
Trigger: AATCCCTGCATGCAGAACTCATTGACTTCTCAAAGA...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTTTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp AATATAAGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTCAGATGATTCCCCTGTaGCAAGGGATACAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: NISTSHPHMLMKNILLTSQMIPL*QGIQQE
Trigger: CTCTTGCTGTATCCCTTGGCACAGGGGAATCATCTG...AGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCTTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCACCTTGTTAGTAAGTTaGAGACTCATCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTITLLVS*RLIWSL
Trigger: CAGTGACCAGATGAGTCTGCAACTTACTAACAAGGT...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAGGAAGAGTTATGAGATaGTTAATGTCTCTAAAGCAA +
Preference number: 2 (lower is better)
Translates to: KNTGVFSQSHTRENGANTGRVMR*LMSLKQ
Trigger: TTGCTTTAGAGACATTAACCATCTCATAACTCTTCC...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAAAGAGCCCGAAATTGTaGTCAGTACCATACCAGGAA +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRKSPKL*SVPYQE
Trigger: TTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGTATAAATATGGCAGATaGCTTAAGACAGGCATCATC +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRYKYGR*LKTGII
Trigger: GATGATGCCTGTCTTAAGCCATCTGCCATATTTATA...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCAGGCGGGTATGGTGTTaGCAATGTAAAAGAAGTATA +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTIRRVWC*QCKRSI
Trigger: TATACTTCTTTTACATTGTCAACACCATACCCGCCT...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTGCAGCAGCAATGTACTaGAATTACTCTGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: WRRVLYPEIPNREGNLISAAAMY*NYSEFR
Trigger: TCTGAATTCAGAGTAATTTCAGTACATTGCTGCTGC...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAAAGGTGCTCCCAGTTATaGTCAGATATCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDERCSQL*SDIWGE
Trigger: CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCT...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGAAAATGCAAGGGATGTaGATAGGTTTACAACTTAGT +
Preference number: 2 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRKMQGM*IGLQLS
Trigger: ACTAAGTTGTAAACCTATGCACATCCCTTGCATTTT...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAACCTTGTTAGTAAGTTaGAGACTCATCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRTLLVS*RLIWSL
Trigger: CAGTGACCAGATGAGTCTGCAACTTACTAACAAGGT...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp AATATAAGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTTTATTCTTATTCCCCTaGGTGTGCCCCATGAACGGA +
Preference number: 2 (lower is better)
Translates to: NISTSHPHMLMKNILLTSLFLFP*VCPMNG
Trigger: TCCGTTCATGGGGCACACCCAGGGGAATAAGAATAA...AGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCTTATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTGGAAGAGTTATGAGATaGTTAATGTCTCTAAAGCAA +
Preference number: 2 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVGRVMR*LMSLKQ
Trigger: TTGCTTTAGAGACATTAACCATCTCATAACTCTTCC...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGACCGAATCTCCTGTATTaGAAGAATGTGACTTCATGG +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRPNLLY*KNVTSW
Trigger: CCATGAAGTCACATTCTTCCAATACAGGAGATTCGG...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAATTATCTCTGGTTTGGTaGCTTGGTCACCCCACTGTG +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDELSLVW*LGHPTV
Trigger: CACAGTGGGGTGACCAAGCCACCAAACCAGAGATAA...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAACCAGGAACGACTGTCTaGCCTTGGCATCTATCAGAT +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDEPGTTV*PWHLSD
Trigger: ATCTGATAGATGCCAAGGCCAGACAGTCGTTCCTGG...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAACATCATCAGCATCTCTaGAGATGTGGGCTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDEHHQHL*RCGLKG
Trigger: CCCTTTGAGCCCACATCTCCAGAGATGCTGATGATG...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCTGTATTGGAAGAATGTaGCTTCATGGAAGAGTTATG +
Preference number: 2 (lower is better)
Translates to: TGNIFEKSMSSACRDFTICIGRM*LHGRVM
Trigger: CATAACTCTTCCATGAAGTCACATTCTTCCAATACA...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp AGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTGGCAAATGTATTGGAAGAATGTaGCTTCATGGAAGAGTTATG +
Preference number: 2 (lower is better)
Translates to: STSHPHMLMKNILLTSGKCIGRM*LHGRVM
Trigger: CATAACTCTTCCATGAAGTCACATTCTTCCAATACA...TTTGCCAGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAAGGCGGGTATGGTGTTaGCAATGTAAAAGAAGTATA +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRRRVWC*QCKRSI
Trigger: TATACTTCTTTTACATTGTCAACACCATACCCGCCT...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GACTGTCCACATGCATTAAGAGTCAAGACCCAACTTCAAATCTCTAAAAGGTTTTTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: DCPHALRVKTQLQISKRFFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...AAACCTTTTAGAGATTTGAAGTTGGGTCTTGACTCTTAATGCATGTGGACAGTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
3UTR-3UTR CCA 90 bp AATATAAGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTACTGATACTCACTCCTaGGCCTTCAAAGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: NISTSHPHMLMKNILLTSTDTHS*AFKGSM
Trigger: CATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGT...AGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCTTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TTACTTCAGTTGTTGATGTTGCATATCTTTGGAACACATGTTGGCAGAGAAAAATCAGATGTTCACAGATaGTGTGCAGGAACAGCAAAC +
Preference number: 2 (lower is better)
Translates to: LLQLLMLHIFGTHVGREKSDVHR*CAGTAN
Trigger: GTTTGCTGTTCCTGCACATCATCTGTGAACATCTGA...TTTTTCTCTGCCAACATGTGTTCCAAAGATATGCAACATCAACAACTGAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486402.1
3UTR-3UTR TCA 90 bp ATTACTTCAGTTGTTGATGTTGCATATCTTTGGAACACATGTTGGCAGAGAAAACCTCTGATAGCTGCATaGCACTCAAATGGTATGTCT +
Preference number: 2 (lower is better)
Translates to: ITSVVDVAYLWNTCWQRKPLIAA*HSNGMS
Trigger: AGACATACCATTTGAGTGTCATGCAGCTATCAGAGG...TTTTCTCTGCCAACATGTGTTCCAAAGATATGCAACATCAACAACTGAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486402.1
3UTR-3UTR GCA 90 bp AATATAAGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTTTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: NISTSHPHMLMKNILLTSFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...AGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCTTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR TCA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAATCTTTGAGAAGTCAATaGGTTCTGCATGCAGGGATT +
Preference number: 2 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDESLRSQ*VLHAGI
Trigger: AATCCCTGCATGCAGAACTCATTGACTTCTCAAAGA...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR GCA 90 bp GTTTCCCATGTGTTAGTTGTAGTTGTCTTTGTGCTTCACCAGAAAAGAGGTAGAAAAATGCAAGGGATGTaGATAGGTTTACAACTTAGT +
Preference number: 2 (lower is better)
Translates to: VSHVLVVVVFVLHQKRGRKMQGM*IGLQLS
Trigger: ACTAAGTTGTAAACCTATGCACATCCCTTGCATTTT...TCTACCTCTTTTCTGGTGAAGCACAAAGACAACTACAACTAACACATGGGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp CACGTGAGGATTGGGCGGCCTTCACATCAGTCACGCTaGCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: HVRIGRPSHQSR*LLHPAAAYLPA
Trigger: TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGGCCGCCCAATCCTCACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp TCCAGTACACCCGTGGCCCTTGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAGCTGTGCTCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: SSTPVALGRMAL*ESDVVQLCSGR
Trigger: CCTGCCAGAGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTACTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp GAGACCACAGGTGGCCTCCAGTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCA +
Preference number: 3 (lower is better)
Translates to: ETTGGLQYTRGP*AHGSVRVRRGP
Trigger: TGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGGCCACCTGTGGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp GGAAGGAGAGACCACAGGTGGCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACG +
Preference number: 3 (lower is better)
Translates to: GRRDHRWPPVHP*PLGAWLCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGGCCACCTGTGGTCTCTCCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACTGTGGGGAATGGAGTaGGGTGGGGGAGAGAACCTT +
Preference number: 3 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPALWGME*GGGENL
Trigger: AAGGTTCTCTCCCCCACCCAACTCCATTCCCCACAG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp TGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCAGGCTACTTTGTCACC +
Preference number: 3 (lower is better)
Translates to: WPLGAWLCASQT*SSCALAGYFVT
Trigger: GGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACTCTGGCAGGCTACTTaGTCACCCTGCCAACTGATA +
Preference number: 3 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPALWQAT*SPCQLI
Trigger: TATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATGGCTTTGGGCTGCCTaGTTTTTCAGGGGCAGTTTC +
Preference number: 3 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAWLWAA*FFRGSF
Trigger: GAAACTGCCCCTGAAAAACAAGGCAGCCCAAAGCCA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGCCTGCACAAACGCTCTaGCAAGCTAAGGCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRPAQTL*QAKALL
Trigger: CAGCAGAGCCTTAGCTTGCAAGAGCGTTTGTGCAGG...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGTACACCCGTGGCCCTaGGGCGCATGGCTCTGTGCG +
Preference number: 3 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGVHPWP*GAWLCA
Trigger: CGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTAC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGTACACCCGTGGCCCTaGGGCGCATGGCTCTGTGCG +
Preference number: 3 (lower is better)
Translates to: DGLRQASSASLEMWAQRAVHPWP*GAWLCA
Trigger: CGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTAC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAACAAGGAGCTTGGTTTaGGAATGCCGATTCCAAGGT +
Preference number: 3 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPATRSLV*ECRFQG
Trigger: ACCTTGGAATCGGCATTCCAAAACCAAGCTCCTTGT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAACAGGTTCGAGGGAGTaGATGGAGGGTCAGACGAGA +
Preference number: 3 (lower is better)
Translates to: LVLCRQRTSILVVPATGQTGSRE*MEGQTR
Trigger: TCTCGTCTGACCCTCCATCAACTCCCTCGAACCTGT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp GGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCCTGCCAACTGATACTC +
Preference number: 3 (lower is better)
Translates to: GSVRVRRGPAVL*QATLSPCQLIL
Trigger: GAGTATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTCTGACTCGCACAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp GGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTaGGCTCAAAGGGCAAGTGGGGGCGTGGGGGTTTCC +
Preference number: 3 (lower is better)
Translates to: GLRQASSASLEM*AQRASGGVGVS
Trigger: GGAAACCCCCACGCCCCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGCTGTGGGGAATGGAGTaGGGTGGGGGAGAGAACCTT +
Preference number: 3 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLLWGME*GGGENL
Trigger: AAGGTTCTCTCCCCCACCCAACTCCATTCCCCACAG...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp CTCTGGAGATGTGGGCTCAAAGGGCAAGTGGGGGCGTaGGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: LWRCGLKGQVGA*GFPLEGGKFLF
Trigger: AAACAGAAACTTCCCTCCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCCCACATCTCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp ATCAACTTGTACTGTGCCGGCAGCGCACCAGCATTCTaGTTGTTCCGGCGACAGGGCAAAGGGATCAGGATG +
Preference number: 3 (lower is better)
Translates to: INLYCAGSAPAF*LFRRQGKGIRM
Trigger: CATCCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAGTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTGACTTCAGTACACCCGTGGCCCTaGGGCGCATGGCTCTGTGCG +
Preference number: 3 (lower is better)
Translates to: KESENPSPNLLYWKNVTSVHPWP*GAWLCA
Trigger: CGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTAC...TGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGATGACAAGGAGCTaGGTTTTGGAATGCCGATTC +
Preference number: 3 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRMTRS*VLECRF
Trigger: GAATCGGCATTCCAAAACCAAGCTCCTTGTCATCCT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR TCA 72 bp CTTTTGCTCAGTCCATTTGCACAGGTTCGAGGGAGTTaGTGGAGGGTCAGACGAGAGGTGGTGGGAGCTCAG +
Preference number: 3 (lower is better)
Translates to: LLLSPFAQVRGS*WRVRREVVGAQ
Trigger: CTGAGCTCCCACCACCTCTCGTCTGACCCTCCATCAACTCCCTCGAACCTGTGCAAATGGACTGAGCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp TACTTCTGTTTCTGTGGGCTCTGTCTGCCCACCTGCTaGACAAAGCAAGGCAGGGGAAAGACCGGATGGGAA +
Preference number: 3 (lower is better)
Translates to: YFCFCGLCLPTC*TKQGRGKTGWE
Trigger: TTCCCATCCGGTCTTTCCCCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAGCCCACAGAAACAGAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp TTCTACTTCTGTTTCTGTGGGCTCTGTCTGCCCACCTaGTGCACAAAGCAAGGCAGGGGAAAGACCGGATGG +
Preference number: 3 (lower is better)
Translates to: FYFCFCGLCLPT*CTKQGRGKTGW
Trigger: CCATCCGGTCTTTCCCCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAGCCCACAGAAACAGAAGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp AGAGATGGTGCGGCCCTCTTTCTACTTCTGTTTCTGTaGGCTCTGTCTGCCCACCTGCTGCACAAAGCAAGG +
Preference number: 3 (lower is better)
Translates to: RDGAALFLLLFL*ALSAHLLHKAR
Trigger: CCTTGCTTTGTGCAGCAGGTGGGCAGACAGAGCCCACAGAAACAGAAGTAGAAAGAGGGCCGCACCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACACTCTGGTTTGGTGGCTaGGTCACCCCACTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: KNTGVFSQSHTRENGANTLWFGG*VTPLWG
Trigger: GCCCCACAGTGGGGTGACCAAGCCACCAAACCAGAG...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp TCTAGTGTGAGACCACTGTTGAGCTTATCTCTGGTTTaGTGGCTTGGTCACCCCACTGTGGGGCCCATACAG +
Preference number: 3 (lower is better)
Translates to: SSVRPLLSLSLV*WLGHPTVGPIQ
Trigger: CTGTATGGGCCCCACAGTGGGGTGACCAAGCCACCAAACCAGAGATAAGCTCAACAGTGGTCTCACACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp ATTAAACACGATACTCGGGTCTTAGCACGTGAGGATTaGGCGGCCTTCACATCAGTCACGCTGCCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: IKHDTRVLARED*AAFTSVTLPAA
Trigger: TGCAGCAGGCAGCGTGACTGATGTGAAGGCCGCCCAATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGAGCTTATCTCTGGTTaGGTGGCTTGGTCACCCCAC +
Preference number: 3 (lower is better)
Translates to: DGLRQASSASLEMWAQRAELISG*VAWSPH
Trigger: GTGGGGTGACCAAGCCACCAAACCAGAGATAAGCTC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp CTGGGTGTTGAGGGACACCTCCTGCACAAACGCTCTTaGAAGCTAAGGCTCTGCTGTACCCTGCAAATACTT +
Preference number: 3 (lower is better)
Translates to: LGVEGHLLHKRS*KLRLCCTLQIL
Trigger: AAGTATTTGCAGGGTACAGCAGAGCCTTAGCTTGCAAGAGCGTTTGTGCAGGAGGTGTCCCTCAACACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGAGTGTGAGACCACTGTaGAGCTTATCTCTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLSVRPL*SLSLVW
Trigger: CCAAACCAGAGATAAGCTCAACAGTGGTCTCACACT...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACACTGTGGGGAATGGAGTaGGGTGGGGGAGAGAACCTT +
Preference number: 3 (lower is better)
Translates to: KNTGVFSQSHTRENGANTLWGME*GGGENL
Trigger: AAGGTTCTCTCCCCCACCCAACTCCATTCCCCACAG...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTCTGGCAGGCTACTTaGTCACCCTGCCAACTGATA +
Preference number: 3 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYLWQAT*SPCQLI
Trigger: TATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAG...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTCTCTGGTTTGGTGGCTaGGTCACCCCACTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: WRRVLYPEIPNREGNLISLWFGG*VTPLWG
Trigger: GCCCCACAGTGGGGTGACCAAGCCACCAAACCAGAG...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCAGTGTGAGACCACTGTaGAGCTTATCTCTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGSVRPL*SLSLVW
Trigger: CCAAACCAGAGATAAGCTCAACAGTGGTCTCACACT...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp CTAAGAAGGAATTGGACGGGGAACAGGAACACCTCCTaGATTTCTACTGCAGTGGGGGACTTTGCGACATCT +
Preference number: 3 (lower is better)
Translates to: LRRNWTGNRNTS*ISTAVGDFATS
Trigger: AGATGTCGCAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAATTCCTTCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp GCTTATCTCTGGTTTGGTGGCTTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGTTCACTCAATACCTTG +
Preference number: 3 (lower is better)
Translates to: AYLWFGGLVTPL*GPYRSSSLNTL
Trigger: CAAGGTATTGAGTGAACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAAGCCACCAAACCAGAGATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp CTGGATCCAGCATCAGCATGCGACGTACTAGGTCTTTaGCACTTTCAGAGATATGGCTCCACTGCCTTGGAT +
Preference number: 3 (lower is better)
Translates to: LDPASACDVLGL*HFQRYGSTALD
Trigger: ATCCAAGGCAGTGGAGCCATATCTCTGAAAGTGCCAAAGACCTAGTACGTCGCATGCTGATGCTGGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR CAA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGCCCGAATCTCCTGTATaGGAAGAATGTGACTTCATG +
Preference number: 3 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLPESPV*EECDFM
Trigger: CATGAAGTCACATTCTTCCAATACAGGAGATTCGGG...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGCCCTACCCAACTCTTaGAAGGTTTCTCTCTCTATC +
Preference number: 3 (lower is better)
Translates to: DGLRQASSASLEMWAQRAALPNS*KVSLSI
Trigger: GATAGAGAGAGAAACCTTCAAAGAGTTGGGTAGGGC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp AGGCTTTCCGTAAGGCTCTCTTTTGACCACTTCTGGTaGCATAAAATGAGGTGTTCCAACACGTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: RLSVRLSFDHFW*HKMRCSNTSSS
Trigger: GCTGGAGGACGTGTTGGAACACCTCATTTTATGGCACCAGAAGTGGTCAAAAGAGAGCCTTACGGAAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR CAA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAAGTACACCCGTGGCCCTaGGGCGCATGGCTCTGTGCG +
Preference number: 3 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDEVHPWP*GAWLCA
Trigger: CGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTAC...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATACAAGGAGCTTGGTTTaGGAATGCCGATTCCAAGGT +
Preference number: 3 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDTRSLV*ECRFQG
Trigger: ACCTTGGAATCGGCATTCCAAAACCAAGCTCCTTGT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR TCA 72 bp GACACAAGGCCGATAACAAAGAGGCTTTTCCACAAATaGGGTGCTCCCAGTTATGCTCAGATATCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: DTRPITKRLFHK*GAPSYAQISGE
Trigger: CTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
3UTR TCA 72 bp ACACGTCCTCCAGCTACAAGTCCAGACTCCCCTAATTaGATAGCTACCCCAAAGCCTCCAAGTTTAACAGGT +
Preference number: 3 (lower is better)
Translates to: TRPPATSPDSPN*IATPKPPSLTG
Trigger: ACCTGTTAAACTTGGAGGCTTTGGGGTAGCTATTCAATTAGGGGAGTCTGGACTTGTAGCTGGAGGACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR GCA 72 bp GGATTTCACCATCGGAATGATGGCAAGAATGATGCCTaGCTGTGTGCTTCTCAGAGGACGTATAAAGCCACT +
Preference number: 3 (lower is better)
Translates to: GFHHRNDGKNDA*LCASQRTYKAT
Trigger: AGTGGCTTTATACGTCCTCTGAGAAGCACACAGGCAGGCATCATTCTTGCCATCATTCCGATGGTGAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp TTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTaGAGTGGGGGACTTTGCGACATCTTTAGATATTCT +
Preference number: 3 (lower is better)
Translates to: LDGEQEHLLHFY*SGGLCDIFRYS
Trigger: AGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp GGAGGGATGAGGATGACAAGGAGCTTGGTTTTGGAATaGCGATTCCAAGGTGCCTTCTCTTTTCAAAGAGAC +
Preference number: 3 (lower is better)
Translates to: GGMRMTRSLVLE*RFQGAFSFQRD
Trigger: GTCTCTTTGAAAAGAGAAGGCACCTTGGAATCGGCATTCCAAAACCAAGCTCCTTGTCATCCTCATCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp CACCTCCTGCACAAACGCTCTTGCAAGCTAAGGCTCTaGTGTACCCTGCAAATACTTACAATTGGATACGGT +
Preference number: 3 (lower is better)
Translates to: HLLHKRSCKLRL*CTLQILTIGYG
Trigger: ACCGTATCCAATTGTAAGTATTTGCAGGGTACAGCAGAGCCTTAGCTTGCAAGAGCGTTTGTGCAGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp TACAGGCTTTCCGTAAGGCTCTCTTTTGACCACTTCTaGTGCCATAAAATGAGGTGTTCCAACACGTCCTCC +
Preference number: 3 (lower is better)
Translates to: YRLSVRLSFDHF*CHKMRCSNTSS
Trigger: GGAGGACGTGTTGGAACACCTCATTTTATGGCACCAGAAGTGGTCAAAAGAGAGCCTTACGGAAAGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647118.2
3UTR-3UTR CAA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGAGTTCACTCAATACCTaGTTAGTAAGTTGCAGACTC +
Preference number: 3 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLSSLNT*LVSCRL
Trigger: GAGTCTGCAACTTACTAACAAGGTATTGAGTGAACT...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCAGTTCACTCAATACCTaGTTAGTAAGTTGCAGACTC +
Preference number: 3 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGSSLNT*LVSCRL
Trigger: GAGTCTGCAACTTACTAACAAGGTATTGAGTGAACT...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTGAGCTTATCTCTGGTTaGGTGGCTTGGTCACCCCAC +
Preference number: 3 (lower is better)
Translates to: WRRVLYPEIPNREGNLISELISG*VAWSPH
Trigger: GTGGGGTGACCAAGCCACCAAACCAGAGATAAGCTC...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCGAGCTTATCTCTGGTTaGGTGGCTTGGTCACCCCAC +
Preference number: 3 (lower is better)
Translates to: TGNIFEKSMSSACRDFTIELISG*VAWSPH
Trigger: GTGGGGTGACCAAGCCACCAAACCAGAGATAAGCTC...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAAGTGTGAGACCACTGTaGAGCTTATCTCTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: KNTGVFSQSHTRENGANTSVRPL*SLSLVW
Trigger: CCAAACCAGAGATAAGCTCAACAGTGGTCTCACACT...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGCTGTAGATTACAGATaGTTTTGTCCAACACAGACA +
Preference number: 3 (lower is better)
Translates to: DGLRQASSASLEMWAQRAAVDYR*FCPTQT
Trigger: TGTCTGTGTTGGACAAAACAATCTGTAATCTACAGC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCCTCTGGCAGGCTACTTaGTCACCCTGCCAACTGATA +
Preference number: 3 (lower is better)
Translates to: TGNIFEKSMSSACRDFTILWQAT*SPCQLI
Trigger: TATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAG...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGAACGACTGTCTGGCCTaGGCATCTATCAGATTCGAA +
Preference number: 3 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRNDCLA*ASIRFE
Trigger: TTCGAATCTGATAGATGCCAAGGCCAGACAGTCGTT...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGACTAAGAGCCCGAAATaGTGGTCAGTACCATACCAG +
Preference number: 3 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRTKSPK*WSVPYQ
Trigger: CTGGTATGGTACTGACCACAATTTCGGGCTCTTAGT...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp TGGAGGAGAGTCCTGTATCCAGAGATTCCAAACAGAGAGGGAAATCTTATTTCTCAGCCTAAGAAGGAATaGGACGGGGAACAGGAACAC +
Preference number: 3 (lower is better)
Translates to: WRRVLYPEIPNREGNLISQPKKE*DGEQEH
Trigger: GTGTTCCTGTTCCCCGTCCAATTCCTTCTTAGGCTG...AGAAATAAGATTTCCCTCTCTGTTTGGAATCTCTGGATACAGGACTCTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR TCA 72 bp TCTGCCACCAATAGGATGGGCTGGGACGATGCCTTCTaGATGCAAATAGCAAGAAGTAGGTCAACCATTTGT +
Preference number: 3 (lower is better)
Translates to: SATNRMGWDDAF*MQIARSRSTIC
Trigger: ACAAATGGTTGACCTACTTCTTGCTATTTGCATTCAGAAGGCATCGTCCCAGCCCATCCTATTGGTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp GAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTaGGACATCTTTAGATATTCTGCCACCAATAGGATG +
Preference number: 3 (lower is better)
Translates to: EHLLHFYCSGGL*DIFRYSATNRM
Trigger: CATCCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp TTGAGCATATTCTTTATTTTGTGCCATAGCCATGGCTaGTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: LSIFFILCHSHG*SIPETRSLALQ
Trigger: CTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCAGCCATGGCTATGGCACAAAATAAAGAATATGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644770.1
3UTR TCA 72 bp TGGAGTTTCTCTTCTTCCCCTGTCACACAAGATAACTaGTTAGGGTTTCATCAACTTGTACTGTGCCGGCAG +
Preference number: 3 (lower is better)
Translates to: WSFSSSPVTQDN*LGFHQLVLCRQ
Trigger: CTGCCGGCACAGTACAAGTTGATGAAACCCTAATCAGTTATCTTGTGTGACAGGGGAAGAAGAGAAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR TCA 72 bp AATGAAAAACATTCTACTGACCTCTGGCAAAGAGTCTaGGAACCCCAGCCCGAATCTCCTGTATTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: NEKHSTDLWQRV*EPQPESPVLEE
Trigger: TTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAGGTCAGTAGAATGTTTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 72 bp TTCGAATCAGTTCTAACACAGCCCTACCCAACTCTTTaGAGGTTTCTCTCTCTATCTAGTGTGAGACCACTG +
Preference number: 3 (lower is better)
Translates to: FESVLTQPYPTL*RFLSLSSVRPL
Trigger: CAGTGGTCTCACACTAGATAGAGAGAGAAACCTTCAAAGAGTTGGGTAGGGCTGTGTTAGAACTGATTCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 72 bp GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATGTACTaGAATTACTCTGAATTCAGAAATGTAAGTATATGC +
Preference number: 3 (lower is better)
Translates to: AAAAAAAAAAMY*NYSEFRNVSIC
Trigger: GCATATACTTACATTTCTGAATTCAGAGTAATTTCAGTACATTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CCA 72 bp AAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTaGAAGAATGTGACTTCATGGAAGAGTTATGAGATG +
Preference number: 3 (lower is better)
Translates to: KESENPSPNLLY*KNVTSWKSYEM
Trigger: CATCTCATAACTCTTCCATGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTGCTGTAGATTACAGATaGTTTTGTCCAACACAGACA +
Preference number: 3 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVAVDYR*FCPTQT
Trigger: TGTCTGTGTTGGACAAAACAATCTGTAATCTACAGC...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp AGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTGGCAAACCCGAATCTCCTGTATaGGAAGAATGTGACTTCATG +
Preference number: 3 (lower is better)
Translates to: STSHPHMLMKNILLTSGKPESPV*EECDFM
Trigger: CATGAAGTCACATTCTTCCAATACAGGAGATTCGGG...TTTGCCAGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGAGTTCACTCAATACCTaGTTAGTAAGTTGCAGACTC +
Preference number: 3 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRSSLNT*LVSCRL
Trigger: GAGTCTGCAACTTACTAACAAGGTATTGAGTGAACT...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCTACAGTGCTTGTGAATaGTGGGGCCACAGACATTTA +
Preference number: 3 (lower is better)
Translates to: TGNIFEKSMSSACRDFTIYSACE*WGHRHL
Trigger: TAAATGTCTGTGGCCCCACAATTCACAAGCACTGTA...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR GCA 72 bp TACAGAAGTAGTTCACTCAATACCTTGTTAGTAAGTTaGAGACTCATCTGGTCACTGGCAAAGAACAACATC +
Preference number: 3 (lower is better)
Translates to: YRSSSLNTLLVS*RLIWSLAKNNI
Trigger: GATGTTGTTCTTTGCCAGTGACCAGATGAGTCTGCAACTTACTAACAAGGTATTGAGTGAACTACTTCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR-3UTR CAA 90 bp TTGCATTTAAAAAGGCTACAATGTTATCTTGACACTGGGAAACTTCCAGATGAAAGTTCACTCAATACCTaGTTAGTAAGTTGCAGACTC +
Preference number: 3 (lower is better)
Translates to: LHLKRLQCYLDTGKLPDESSLNT*LVSCRL
Trigger: GAGTCTGCAACTTACTAACAAGGTATTGAGTGAACT...TTCATCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGCCTTTTTAAATGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR TCA 72 bp CTGCTGTACCCTGCAAATACTTACAATTGGATACGGTaGAATATACAACAACCATTAACATCTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LLYPANTYNWIR*NIQQPLTSLSF
Trigger: AAAAGAGAGAGATGTTAATGGTTGTTGTATATTTCACCGTATCCAATTGTAAGTATTTGCAGGGTACAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGTCACGCTGCCTGCTaGACCCGGCAGCCGCCTACC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPASHAAC*TRQPPT
Trigger: GGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPARRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGAGTCACGCTGCCTGCTaGACCCGGCAGCCGCCTACC +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRSHAAC*TRQPPT
Trigger: GGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAATAGCGGCCGCAGCGTaGAGGGCTTCGAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAIAAAA*RASKTG
Trigger: CCCCGTTTTCGAAGCCCTCCACGCTGCGGCCGCTAT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATGGCCCTTGGGCGCATaGCTCTGTGCGAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAWPLGA*LCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 72 bp AGAGACCACAGGTGGCCTCCAGTACACCCGTGGCCCTaGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RDHRWPPVHPWP*GAWLCASQTWS
Trigger: GGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGGCCACCTGTGGTCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAACGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAACGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGGGCTCAAAGGGCAAGTaGGGGCGTGGGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRGSKGK*GRGGFH
Trigger: GTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCC...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTGCTGTCCAGCACCTGTaGGACTGCTCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAAVQHL*DCSFCC
Trigger: GCAGCAGAAAGAGCAGTCTCACAGGTGCTGGACAGC...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTTCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCASQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAATCAGCCCCTGCTCGTaGATCTTCCGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAISPCS*IFRMVS
Trigger: GGAGACCATCCGGAAGATCCACGAGCAGGGGCTGAT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCTCTGGCAAAGAGTCTaGGAACCCCAGCCCGAATCT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCALWQRV*EPQPES
Trigger: AGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAG...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATCGCATCCTCGTGGCTaGCGTACTCCAAGTACTCGT +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPASHPRG*RTPSTR
Trigger: ACGAGTACTTGGAGTACGGCAGCCACGAGGATGCGA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTGACGTGGTCCAGCTGTaGTCTGGCAGGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCADVVQL*SGRLLC
Trigger: ACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTC...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTTGGCCCCAGAGATGGTaGGGCCCTCTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAWPQRW*GPLSTS
Trigger: AGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCA...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRCASQT*SSCALA
Trigger: TGCCAGAGCACAGCTGGACCACGTCTGACTCGCACA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGGTTGTACTTCCTCTaGGTCCAGAGAGGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPARLYFL*VQRGSP
Trigger: GGGTGACCCTCTCTGGACCCAGAGGAAGTACAACCT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCCTGGGTGTGCCCCATaGACGGAATGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAPGCAP*TECRMY
Trigger: GTACATTCTACATTCCGTTCATGGGGCACACCCAGG...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGCTCCACGTCCAGTATTaGAATCAGCCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRLHVQY*NQPLLV
Trigger: CACGAGCAGGGGCTGATTGCAATACTGGACGTGGAG...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTGGCAAGAATGATGCCTaGCTGTGTGCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAGKNDA*LCASQR
Trigger: CCTCTGAGAAGCACACAGGCAGGCATCATTCTTGCC...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CATAGCCATGGCTGCTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAGCCAGAACGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: HSHGCSIPETRSLALQPERRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...TTCTGGCTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCAGCCATGGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644770.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCAAACCAAGTACAGCTaGCCTGCTGCTCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAQTKYS*PAAPVW
Trigger: CCAAACAGGAGCAGCAGGCCAGCTGTACTTGGTTTG...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACAAACCAAGTACAGCTaGCCTGCTGCTCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAQTKYS*PAAPVW
Trigger: CCAAACAGGAGCAGCAGGCCAGCTGTACTTGGTTTG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAATCGTCGTACAACACTaGAGGGACCCTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAIVVQH*RDPFRS
Trigger: TGATCGGAAAGGGTCCCTTCAGTGTTGTACGACGAT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCCAGACTCCCCTAATTaGATAGCTACCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAPDSPN*IATPKP
Trigger: AGGCTTTGGGGTAGCTATTCAATTAGGGGAGTCTGG...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGAGCAACAAGGACAGATaGTTCCCCTGTGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRSNKDR*FPCAKG
Trigger: TCCCTTGGCACAGGGGAATCATCTGTCCTTGTTGCT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCCCCGCGAGCCCTCGGTaGCGAGGACGCTCGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASIPASPR*RGRSSG
Trigger: CCCACTCGAGCGTCCTCGGCACCGAGGGCTCGCGGG...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGGTGCTCCCAGTTATaGTCAGATATCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPARCSQL*SDIWGE
Trigger: CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCAGTCACGCTGCCTGCTaGACCCGGCAGCCGCCTACC +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGSHAAC*TRQPPT
Trigger: GGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACT...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGGGGACTGTCTGGAAGTaGAAGGGGAATCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRGTVWK*KGNLSH
Trigger: GTGAGAGAGATTCCCCTTCCACTTCCAGACAGTCCC...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378163.7
ENST00000378168.8
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTGCTATGACCATTAGCTaGGGACTGTCTGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAAMTIS*GLSGSG
Trigger: TCCACTTCCAGACAGTCCCCAGCTAATGGTCATAGC...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644219.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCGTGGATCTTCCGGATaGTCTCCAGTTTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCARGSSG*SPVLSH
Trigger: ATGGGACAAAACTGGAGACCATCCGGAAGATCCACG...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRLVTPL*GPYRSS
Trigger: ACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATTATCTCTGGTTTGGTaGCTTGGTCACCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPALSLVW*LGHPTV
Trigger: CACAGTGGGGTGACCAAGCCACCAAACCAGAGATAA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGCTTATCTCTGGTTTaGTGGCTTGGTCACCCCACT +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPASLSLV*WLGHPT
Trigger: AGTGGGGTGACCAAGCCACCAAACCAGAGATAAGCT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCCAGGAACGACTGTCTaGCCTTGGCATCTATCAGAT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAPGTTV*PWHLSD
Trigger: ATCTGATAGATGCCAAGGCCAGACAGTCGTTCCTGG...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTCGCTGGGAATCTTCCTaGAGGGTGGTTCAATTGACT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCARWESS*RVVQLT
Trigger: AGTCAATTGAACCACCCTCCAGGAAGATTCCCAGCG...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATGCTGGCCCCAGAGATaGTGCGGCCCTCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQCWPQR*CGPLST
Trigger: AGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAACTCTGGCAAAGAGTCTaGGAACCCCAGCCCGAATCT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQLWQRV*EPQPES
Trigger: AGATTCGGGCTGGGGTTCTCAGACTCTTTGCCAGAG...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATTTTGGTTGGGTAGTTaGTGGCAAGTCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAFWLGS*WQVLTG
Trigger: TCCTGTGAGGACTTGCCATCAACTACCCAACCAAAA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGACCCGCGAGCCCTCGGTaGCGAGGACGCTCGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRPASPR*RGRSSG
Trigger: CCCACTCGAGCGTCCTCGGCACCGAGGGCTCGCGGG...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATTTGGCTCTCTGTACTaGATCGCTTGGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAFGSLY*IAWRIP
Trigger: AGGAATCCTCCAAGCGATGCAGTACAGAGAGCCAAA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAACTCCACGTCCAGTATTaGAATCAGCCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQLHVQY*NQPLLV
Trigger: CACGAGCAGGGGCTGATTGCAATACTGGACGTGGAG...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATGCCGCGGCAGGACCATaGAGCGAGGATCGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDAAAGP*SEDRRG
Trigger: TCCGCGGCGATCCTCGCTCCATGGTCCTGCCGCGGC...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACTTCCAATACCTCTTTaGCTCTCTGTACTGCATCGC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPALPIPL*LSVLHR
Trigger: GCGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATTTAATAATAGGCGGTaGGGGGCGGAGGCGGGTATG +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQFNNRR*GAEAGM
Trigger: CATACCCGCCTCCGCCCCCCACCGCCTATTATTAAA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTTATCTCTGGTTTGGTaGCTTGGTCACCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRLSLVW*LGHPTV
Trigger: CACAGTGGGGTGACCAAGCCACCAAACCAGAGATAA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGCATCTCTGGAGATGTaGGCTCAAAGGGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQASLEM*AQRASG
Trigger: CCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGGGGAAAGACCGGATaGGAACATGGTGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPARGKTG*EHGGEY
Trigger: ATATTCACCACCATGTTCCCATCCGGTCTTTCCCCT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTAGGGGAAAGACCGGATaGGAACATGGTGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCARGKTG*EHGGEY
Trigger: ATATTCACCACCATGTTCCCATCCGGTCTTTCCCCT...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGTTGTACTTCCTCTaGGTCCAGAGAGGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRLYFL*VQRGSP
Trigger: GGGTGACCCTCTCTGGACCCAGAGGAAGTACAACCT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGAACTGAGTTTGAATaGCGACGTGCCTACACTGCA +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPARTEFE*RRAYTA
Trigger: TGCAGTGTAGGCACGTCGCCATTCAAACTCAGTTCT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTAGAACTGAGTTTGAATaGCGACGTGCCTACACTGCA +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCARTEFE*RRAYTA
Trigger: TGCAGTGTAGGCACGTCGCCATTCAAACTCAGTTCT...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTCTGGTGCCATAAAATaGGGTGTTCCAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRSGAIK*GVPTRP
Trigger: AGGACGTGTTGGAACACCTCATTTTATGGCACCAGA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCACCCGCGAGCCCTCGGTaGCGAGGACGCTCGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSPASPR*RGRSSG
Trigger: CCCACTCGAGCGTCCTCGGCACCGAGGGCTCGCGGG...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTACTGTAAACTTCATGTaGCACTACGTCGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCATVNFM*HYVVSL
Trigger: CAGACTCACGACGTAGTGGCACATGAAGTTTACAGT...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGGCAAGAATGATGCCTaGCTGTGTGCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQGKNDA*LCASQR
Trigger: CCTCTGAGAAGCACACAGGCAGGCATCATTCTTGCC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTTTGCTCAGTCCATTTaGACAGGTTCGAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRFAQSI*TGSREL
Trigger: CAACTCCCTCGAACCTGTGCAAATGGACTGAGCAAA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGTCACATCAGTCACGCTaGCTGCTGCACCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLSHQSR*LLHPAA
Trigger: GGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGA...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAACATCAACTTGTACTGTaGCGGCAGCGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQHQLVL*RQRTSI
Trigger: AATGCTGGTGCGCTGCCGGCACAGTACAAGTTGATG...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCGCCGCGGCAGGACCATaGAGCGAGGATCGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCAAAGP*SEDRRG
Trigger: TCCGCGGCGATCCTCGCTCCATGGTCCTGCCGCGGC...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGERRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGCTTCCAATACCTCTTTaGCTCTCTGTACTGCATCGC +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRLPIPL*LSVLHR
Trigger: GCGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAG...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCTGGCCCTTGGGCGCATaGCTCTGTGCGAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGWPLGA*LCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAAGTTGCAGACTCATCTaGTCACTGGCAAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPASCRLI*SLAKNN
Trigger: GTTGTTCTTTGCCAGTGACCAGATGAGTCTGCAACT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQLVTPL*GPYRSS
Trigger: ACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGGCTCAAAGGGCAAGTaGGGGCGTGGGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGGSKGK*GRGGFH
Trigger: GTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CAA 72 bp GTCAGACGTGGTCCAGCTGTGCTCTGGCAGGCTACTTaGTCACCCTGCCAACTGATACTCACTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRRGPAVLWQAT*SPCQLILTPGP
Trigger: AGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
3UTR CAA 72 bp AACTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTaGTTCCGGCGACAGGGCAAAGGGATCAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: NLYCAGSAPAFW*FRRQGKGIRMG
Trigger: TCCCATCCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGACCCTGGACTTGATGTaGACTTGGCTACATCAACAA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRTLDLM*TWLHQQ
Trigger: TTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTTTTGGTTGGGTAGTTaGTGGCAAGTCCGAAACAGA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRFWLGS*WQVRNR
Trigger: TCTGTTTCGGACTTGCCATCAACTACCCAACCAAAA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378163.7
ENST00000378168.8
CDS-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGCTACAATGTTATCTTaGCACTGGGAAACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAATMLS*HWETSR
Trigger: TCTGGAAGTTTCCCAGTGTCAAGATAACATTGTAGC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTGGGACGATGCCTTCTaGATGCAAATAGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRWDDAF*MQIARS
Trigger: ACTTCTTGCTATTTGCATTCAGAAGGCATCGTCCCA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGGCTGTGTTCAGTTCTaGGAAAACAAGAAACACACA +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAGCVQF*ENKKHT
Trigger: TGTGTGTTTCTTGTTTTCTCAGAACTGAACACAGCC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGTCGGGTCTTAGCACGTaGGGATTGGGCGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLSGLST*GLGGLH
Trigger: GTGAAGGCCGCCCAATCCTCACGTGCTAAGACCCGA...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGCCCGCGAGCCCTCGGTaGCGAGGACGCTCGAGTGGG +
Preference number: 4 (lower is better)
Translates to: NKEAFPQMRCSQLCSDIWPASPR*RGRSSG
Trigger: CCCACTCGAGCGTCCTCGGCACCGAGGGCTCGCGGG...CCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGACGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACACGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCCGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATTTGACCACTTCTGGTaGCATAAAATGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAFDHFW*HKMRCS
Trigger: GGAACACCTCATTTTATGGCACCAGAAGTGGTCAAA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGCCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSIGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGATCAGTCACGCTGCCTaGTGCACCCGGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEISHAA*CTRQPP
Trigger: AGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGAT...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAATCAGTCACGCTGCCTaGTGCACCCGGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRISHAA*CTRQPP
Trigger: AGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGAT...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCTCACATCAGTCACGCTaGCTGCTGCACCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGSHQSR*LLHPAA
Trigger: GGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGA...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTGCAAGCTAAGGCTCTaGTGTACCCTGCAAATACTT +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRCKLRL*CTLQIL
Trigger: AAGTATTTGCAGGGTACAGCAGAGCCTTAGCTTGCA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp TGCTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAGCCAGAAGGAGTCAGGGCATGCCATAGCCATGGCTaGTCCATCCCTGAGACTAGG +
Preference number: 4 (lower is better)
Translates to: CSIPETRSLALQPEGVRACHSHG*SIPETR
Trigger: CCTAGTCTCAGGGATGGAGCAGCCATGGCTATGGCA...TGCCCTGACTCCTTCTGGCTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644770.1
CDS-3UTR CCA 90 bp AAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGCCGCGGCAGGACCATaGAGCGAGGATCGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: KEAFPQMRCSQLCSDIWGAAAGP*SEDRRG
Trigger: TCCGCGGCGATCCTCGCTCCATGGTCCTGCCGCGGC...TCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCACCGAGGACGCTCGAGTaGGGCCGCGAGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSPRTLE*GREAQR
Trigger: TCTCTGGGCCTCGCGGCCCCACTCGAGCGTCCTCGG...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000378154.3
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: QRGFSTNEVLPVMLRYLGRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...CCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGACGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAGTCTCATATAATGGCTaGCTACAGCTTCACTGTACA +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAVSYNG*LQLHCT
Trigger: TGTACAGTGAAGCTGTAGCCAGCCATTATATGAGAC...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACTGAGTGCGGTAACTTaGCACAATCTTGAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPALSAVT*HNLEGN
Trigger: ATTACCTTCAAGATTGTGCCAAGTTACCGCACTCAG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATTCTTCGTCTTTCTTTaGAGGTCTGGTTGTATGTGG +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAFFVFL*RSGCMW
Trigger: CCACATACAACCAGACCTCCAAAGAAAGACGAAGAA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGGGCAAGTGGGGGCGTaGGGGTTTCCACTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAGQVGA*GFPLEG
Trigger: TCCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCGGCTCAAAGGGCAAGTaGGGGCGTGGGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSIGSKGK*GRGGFH
Trigger: GTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCC...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGAGGTGGGAGGAGGTGTaGCCCTCAATGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLRWEEV*PSMLHH
Trigger: GTGATGAAGCATTGAGGGTCACACCTCCTCCCACCT...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCCAGGTTCGAGGGAGTTaGTGGAGGGTCAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGQVRGS*WRVRRE
Trigger: CTCTCGTCTGACCCTCCATCAACTCCCTCGAACCTG...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCCCCGCGAGCCCTCGGTaGCGAGGACGCTCGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DNKEAFPQMRCSQLCSDIPASPR*RGRSSG
Trigger: CCCACTCGAGCGTCCTCGGCACCGAGGGCTCGCGGG...GATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTGACTTCACGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: KESENPSPNLLYWKNVTSRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...TGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGCCATGGGTGATTCAGTaGTTCATAAACAGTGATCCT +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRPWVIQ*FINSDP
Trigger: AGGATCACTGTTTATGAAGCACTGAATCACCCATGG...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGACGAAGACTGAGTaGGGTAACTTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRTKTE*GNLAQS
Trigger: AGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGACTGCTTCTTTTTCTTaGCAAACCAAGTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRTASFS*QTKYSW
Trigger: CCAGCTGTACTTGGTTTGGCAAGAAAAAGAAGCAGT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGAAACTGATGTGTGTGTaGACAGGCAAAGCCAATCAA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRKLMCV*TGKANQ
Trigger: TTGATTGGCTTTGCCTGTGCACACACACATCAGTTT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGCTCTGTCTGCCCACCTaGTGCACAAAGCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLLCLPT*CTKQGR
Trigger: CCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAG...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCCTCTGTCTGCCCACCTaGTGCACAAAGCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGLCLPT*CTKQGR
Trigger: CCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAG...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGAGCCGCCTACCTGCCTaGACAGATGACATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLSRLPA*TDDIPG
Trigger: TCCCGGAATGTCATCTGTGCAGGCAGGTAGGCGGCT...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGAGTCACGCTGCCTGCTaGACCCGGCAGCCGCCTACC +
Preference number: 4 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRSHAAC*TRQPPT
Trigger: GGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACT...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAATCAGTCACGCTGCCTaGTGCACCCGGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTISHAA*CTRQPP
Trigger: AGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGAT...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGCCGCGGCAGGACCATaGAGCGAGGATCGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: NKEAFPQMRCSQLCSDIWAAAGP*SEDRRG
Trigger: TCCGCGGCGATCCTCGCTCCATGGTCCTGCCGCGGC...CCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAATAGCGGCCGCAGCGTaGAGGGCTTCGAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRIAAAA*RASKTG
Trigger: CCCCGTTTTCGAAGCCCTCCACGCTGCGGCCGCTAT...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATAGCGGCCGCAGCGTaGAGGGCTTCGAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSIAAAA*RASKTG
Trigger: CCCCGTTTTCGAAGCCCTCCACGCTGCGGCCGCTAT...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGGTCTCATATAATGGCTaGCTACAGCTTCACTGTACA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRVSYNG*LQLHCT
Trigger: TGTACAGTGAAGCTGTAGCCAGCCATTATATGAGAC...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAACCGCTCCTTAAGCCATaGGTGATTCAGTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQPLLKP*VIQCFI
Trigger: TATGAAGCACTGAATCACCCATGGCTTAAGGAGCGG...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCACTGCAGTTCCATTTTTaGAGTTTTCCAGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPALQFHF*SFPVYP
Trigger: AGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAG...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATTATTCTTATTCCCCTaGGTGTGCCCCATGAACGGA +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQLFLFP*VCPMNG
Trigger: TCCGTTCATGGGGCACACCCAGGGGAATAAGAATAA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATTGGCCCTTGGGCGCATaGCTCTGTGCGAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYWPLGA*LCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATTGGCCCTTGGGCGCATaGCTCTGTGCGAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDWPLGA*LCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGA +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYYTRGP*AHGSVR
Trigger: TCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTA...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGA +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASIYTRGP*AHGSVR
Trigger: TCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTA...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGA +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEYTRGP*AHGSVR
Trigger: TCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTA...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCATCTGGTTTGGTGGCTTaGTCACCCCACTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRASGLVA*SPHCGA
Trigger: GGCCCCACAGTGGGGTGACCAAGCCACCAAACCAGA...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCTCTGGTTTGGTGGCTTaGTCACCCCACTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSISGLVA*SPHCGA
Trigger: GGCCCCACAGTGGGGTGACCAAGCCACCAAACCAGA...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCGGGCAAGTGGGGGCGTaGGGGTTTCCACTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASIGQVGA*GFPLEG
Trigger: TCCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCC...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCGGGCAAGTGGGGGCGTaGGGGTTTCCACTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSGQVGA*GFPLEG
Trigger: TCCCTCTAGTGGAAACCCCCACGCCCCCACTTGCCC...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGTGTGGGGAATGGAGTTaGGTGGGGGAGAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLCGEWS*VGERTF
Trigger: GAAGGTTCTCTCCCCCACCCAACTCCATTCCCCACA...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGGAAAGACCGGATaGGAACATGGTGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQRGKTG*EHGGEY
Trigger: ATATTCACCACCATGTTCCCATCCGGTCTTTCCCCT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCTGCTGGCCCCAGAGATaGTGCGGCCCTCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGCWPQR*CGPLST
Trigger: AGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCA...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGGCATATGACAGATACTaGCTTCCCGCTTTAGATTTG +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRAYDRY*LPALDL
Trigger: CAAATCTAAAGCGGGAAGCCAGTATCTGTCATATGC...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378168.8
ENST00000421587.8
ENST00000675354.1
CDS-3UTR TCA 90 bp GCCATGGCTGCTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAGCCAGAAGGAGGCCCAGTTTCTCTGTTaGTACATCGTCGTACAACAC +
Preference number: 4 (lower is better)
Translates to: AMAAPSLRLGPLLFSQKEAQFLC*YIVVQH
Trigger: GTGTTGTACGACGATGTATCAACAGAGAAACTGGGC...CTCCTTCTGGCTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCAGCCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644770.1
CDS-3UTR TCA 90 bp TGCTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAGCCAGAAGGAGTCAGGGCAGGATGTTTCAGCATATaGCAGATACTGGCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: CSIPETRSLALQPEGVRAGCFSI*QILASR
Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAACATCC...TGCCCTGACTCCTTCTGGCTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644770.1
CDS-3UTR TCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGTGCTTCATAAACAGTaGTCCTTTCAGCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQVLHKQ*SFQLDP
Trigger: TGGATCCAGCTGAAAGGATCACTGTTTATGAAGCAC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGCTGTCCAGCACCTGTaGGACTGCTCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAAVQHL*DCSFCC
Trigger: GCAGCAGAAAGAGCAGTCTCACAGGTGCTGGACAGC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000675354.1
CDS-3UTR TCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCAATTCTCAGGGTAACATaGAATTTCTTCCAATACCTC +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAILRVT*NFFQYL
Trigger: GAGGTATTGGAAGAAATTTCATGTTACCCTGAGAAT...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGAGGCGGGTATGGTGTTaGCAATGTAAAAGAAGTATA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRRRVWC*QCKRSI
Trigger: TATACTTCTTTTACATTGTCAACACCATACCCGCCT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGAAGCCAATCAAGCCATaGGCTTGGAGGAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLKPIKP*AWRRVL
Trigger: CAGGACTCTCCTCCAAGCTCATGGCTTGATTGGCTT...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGTCGGGTCTTAGCACGTaGGGATTGGGCGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGESGLST*GLGGLH
Trigger: GTGAAGGCCGCCCAATCCTCACGTGCTAAGACCCGA...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGATCGGGTCTTAGCACGTaGGGATTGGGCGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRSGLST*GLGGLH
Trigger: GTGAAGGCCGCCCAATCCTCACGTGCTAAGACCCGA...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGCGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: NKEAFPQMRCSQLCSDIWRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...CCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCTCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGSQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCATCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRASQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGAAAGGTAACAGTAGCTaGAGCCCAGGCCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLKGNSS*SPGLPG
Trigger: TCCAGGCAGGCCTGGGCTGCAGCTACTGTTACCTTT...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGCTCTGTCTGCCCACCTaGTGCACAAAGCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLLCLPT*CTKQGR
Trigger: CCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACAGAG...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCAGCCGCCTACCTGCCTaGACAGATGACATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGSRLPA*TDDIPG
Trigger: TCCCGGAATGTCATCTGTGCAGGCAGGTAGGCGGCT...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTGACTTCAATCAGTCACGCTGCCTaGTGCACCCGGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KESENPSPNLLYWKNVTSISHAA*CTRQPP
Trigger: AGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGAT...TGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCAGTCACGCTGCCTaGTGCACCCGGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ADNKEAFPQMRCSQLCSDISHAA*CTRQPP
Trigger: AGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGAT...ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACATCACATCAGTCACGCTaGCTGCTGCACCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTSHQSR*LLHPAA
Trigger: GGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGA...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCATAGCGGCCGCAGCGTaGAGGGCTTCGAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCIAAAA*RASKTG
Trigger: CCCCGTTTTCGAAGCCCTCCACGCTGCGGCCGCTAT...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAATAGCGGCCGCAGCGTaGAGGGCTTCGAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRIAAAA*RASKTG
Trigger: CCCCGTTTTCGAAGCCCTCCACGCTGCGGCCGCTAT...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: NKEAFPQMRCSQLCSDIWRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...CCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCATCAGCCCCTGCTCGTaGATCTTCCGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGISPCS*IFRMVS
Trigger: GGAGACCATCCGGAAGATCCACGAGCAGGGGCTGAT...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp TACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGACTGGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: YRLFCPTQTHRQHKRSRLDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...CAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACATACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGA +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTYTRGP*AHGSVR
Trigger: TCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTA...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTACACCCGTGGCCCTTaGGCGCATGGCTCTGTGCGA +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCYTRGP*AHGSVR
Trigger: TCGCACAGAGCCATGCGCCCAAGGGCCACGGGTGTA...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTCTGGTTTGGTGGCTTaGTCACCCCACTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASISGLVA*SPHCGA
Trigger: GGCCCCACAGTGGGGTGACCAAGCCACCAAACCAGA...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCTCTGGTTTGGTGGCTTaGTCACCCCACTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSSGLVA*SPHCGA
Trigger: GGCCCCACAGTGGGGTGACCAAGCCACCAAACCAGA...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCGGCTCAAAGGGCAAGTaGGGGCGTGGGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCGSKGK*GRGGFH
Trigger: GTGGAAACCCCCACGCCCCCACTTGCCCTTTGAGCC...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGTGCTGGCCCCAGAGATaGTGCGGCCCTCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLCWPQR*CGPLST
Trigger: AGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCA...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGTGGCCCTTGGGCGCATGGCTCTGTGCGAGTCAGACGTGGTCCAGCTGTGCTAAAAGCCCAATTCTATaGTTTCCCATTACACAGCAT +
Preference number: 4 (lower is better)
Translates to: PWPLGAWLCASQTWSSCAKSPIL*FPITQH
Trigger: ATGCTGTGTAATGGGAAACCATAGAATTGGGCTTTT...AGCACAGCTGGACCACGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 72 bp TCTTTTGCTCAGTCCATTTGCACAGGTTCGAGGGAGTaGATGGAGGGTCAGACGAGAGGTGGTGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SFAQSICTGSRE*MEGQTRGGGSS
Trigger: TGAGCTCCCACCACCTCTCGTCTGACCCTCCATCAACTCCCTCGAACCTGTGCAAATGGACTGAGCAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAATGAGTTGAATTTGTaGCTTGACACAGCGGCTAGT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQNELNL*LDTAAS
Trigger: ACTAGCCGCTGTGTCAAGTCACAAATTCAACTCATT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGCTGTCCAGCACCTGTaGGACTGCTCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRAVQHL*DCSFCC
Trigger: GCAGCAGAAAGAGCAGTCTCACAGGTGCTGGACAGC...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378154.3
ENST00000378163.7
ENST00000378168.8
ENST00000645566.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCAGGTGGGAGGAGGTGTaGCCCTCAATGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGRWEEV*PSMLHH
Trigger: GTGATGAAGCATTGAGGGTCACACCTCCTCCCACCT...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGGGGACCATGACCTGCTaGCACAAGGCCGATAACAAA +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLGTMTC*HKADNK
Trigger: TTTGTTATCGGCCTTGTGTCAGCAGGTCATGGTCCC...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCTGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSICHPAN*YSLLGL
Trigger: AAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACA...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCTGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGCHPAN*YSLLGL
Trigger: AAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACA...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGTGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLCHPAN*YSLLGL
Trigger: AAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACA...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCAGCAACAAGGACAGATaGTTCCCCTGTGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGSNKDR*FPCAKG
Trigger: TCCCTTGGCACAGGGGAATCATCTGTCCTTGTTGCT...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGGCTGTGTTCAGTTCTaGGAAAACAAGAAACACACA +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQGCVQF*ENKKHT
Trigger: TGTGTGTTTCTTGTTTTCTCAGAACTGAACACAGCC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTCAGCTCCTGGGTGTTaGGGGACACCTCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASISAPGC*GTPPAQ
Trigger: TTGTGCAGGAGGTGTCCCTCAACACCCAGGAGCTGA...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTGGCAAACGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: STSHPHMLMKNILLTSGKRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...TTTGCCAGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCTTCACATCAGTCACGCTGCCTGCTGCACCCGGCAGCCGCCTACCTGCCTGCATTTACAGCAAATTGTTaGCCAGTTTCTCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: PSHQSRCLLHPAAAYLPAFTANC*PVSLLI
Trigger: TATCAACAGAGAAACTGGGCAACAATTTGCTGTAAA...TGCAGGCAGGTAGGCGGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCTCGCATCCTCGTGGCTaGCGTACTCCAAGTACTCGT +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGSHPRG*RTPSTR
Trigger: ACGAGTACTTGGAGTACGGCAGCCACGAGGATGCGA...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGTCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGESQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCTCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSSQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATTCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDSQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGCCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCCCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGAGGTGCTCCCAGTTATaGTCAGATATCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLRCSQL*SDIWGE
Trigger: CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCT...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAATTTCCACAAATGAGGTaGTCCCAGTTATGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQFPQMR*SQLCSD
Trigger: ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAA...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCGACGTGGTCCAGCTGTaGTCTGGCAGGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGDVVQL*SGRLLC
Trigger: ACAAAGTAGCCTGCCAGAGCACAGCTGGACCACGTC...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGGGCGCATGGCTCTGTaGGAGTCAGACGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KEAFPQMRCSQLCSDIWGGRMAL*ESDVVQ
Trigger: CTGGACCACGTCTGACTCGCACAGAGCCATGCGCCC...TCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCGCTCAGAACACACCCTaGACATCCTGCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSIAQNTP*TSCQGT
Trigger: TGTGCCTTGGCAGGATGTGCAGGGTGTGTTCTGAGC...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGAAGTCAATGAGTTCTaGATGCAGGGATTTCACCAT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQEVNEF*MQGFHH
Trigger: ATGGTGAAATCCCTGCATGCAGAACTCATTGACTTC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAAAAGGTAACAGTAGCTaGAGCCCAGGCCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAKGNSS*SPGLPG
Trigger: TCCAGGCAGGCCTGGGCTGCAGCTACTGTTACCTTT...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGTGTCTGCCCACCTGCTaGACAAAGCAAGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGECLPTC*TKQGRG
Trigger: TCCCCTGCCTTGCTTTGTGCAGCAGGTGGGCAGACA...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGTGGCCCCAGAGATGGTaGGGCCCTCTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLWPQRW*GPLSTS
Trigger: AGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCA...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATAGCCGCCTACCTGCCTaGACAGATGACATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYSRLPA*TDDIPG
Trigger: TCCCGGAATGTCATCTGTGCAGGCAGGTAGGCGGCT...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCATCACATCAGTCACGCTaGCTGCTGCACCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSSHQSR*LLHPAA
Trigger: GGCTGCCGGGTGCAGCAGGCAGCGTGACTGATGTGA...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGGCTCTGCTGTACCCTaGAAATACTTACAATTGGAT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQGSAVP*KYLQLD
Trigger: ATCCAATTGTAAGTATTTGCAGGGTACAGCAGAGCC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATAGCGGCCGCAGCGTaGAGGGCTTCGAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: ADNKEAFPQMRCSQLCSDIAAAA*RASKTG
Trigger: CCCCGTTTTCGAAGCCCTCCACGCTGCGGCCGCTAT...ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAATAGCGGCCGCAGCGTaGAGGGCTTCGAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: KEAFPQMRCSQLCSDIWGIAAAA*RASKTG
Trigger: CCCCGTTTTCGAAGCCCTCCACGCTGCGGCCGCTAT...TCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp GATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCCGTCGTCGTCGGCCATaGTCCGGAGGGGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: DNKEAFPQMRCSQLCSDIRRRRP*SGGDSG
Trigger: GCCGCTATCCCCTCCGGACCATGGCCGACGACGACG...GATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGCATATGACAGATACTaGCTTCCCGCTTTAGATCTT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQAYDRY*LPALDL
Trigger: AAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378163.7
ENST00000644347.1
CDS-3UTR CCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGCAAACAATCTTTCCTTaGTTCCGTAAAAAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRQTIFP*FRKKAN
Trigger: GTTTGCCTTTTTACGGAACCAAGGAAAGATTGTTTG...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAATCAGCCCCTGCTCGTaGATCTTCCGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRISPCS*IFRMVS
Trigger: GGAGACCATCCGGAAGATCCACGAGCAGGGGCTGAT...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATATCAGCCCCTGCTCGTaGATCTTCCGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDISPCS*IFRMVS
Trigger: GGAGACCATCCGGAAGATCCACGAGCAGGGGCTGAT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: ADNKEAFPQMRCSQLCSDDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...ATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: KEAFPQMRCSQLCSDIWGDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...TCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGGTCCAGCTGTGCTCTaGCAGGCTACTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRGPAVL*QATLSP
Trigger: GGGTGACAAAGTAGCCTGCCAGAGCACAGCTGGACC...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTTGGCCCTTGGGCGCATaGCTCTGTGCGAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVWPLGA*LCASQT
Trigger: CGTCTGACTCGCACAGAGCCATGCGCCCAAGGGCCA...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGTTTAATAATAGGCGGTaGGGGGCGGAGGCGGGTATG +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLFNNRR*GAEAGM
Trigger: CATACCCGCCTCCGCCCCCCACCGCCTATTATTAAA...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGTTGGTCACCCCACTGTaGGGCCCATACAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLLVTPL*GPYRSS
Trigger: ACTACTTCTGTATGGGCCCCACAGTGGGGTGACCAA...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGCCAGGAACGACTGTCTaGCCTTGGCATCTATCAGAT +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLPGTTV*PWHLSD
Trigger: ATCTGATAGATGCCAAGGCCAGACAGTCGTTCCTGG...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCGCATCTCTGGAGATGTaGGCTCAAAGGGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGASLEM*AQRASG
Trigger: CCCACTTGCCCTTTGAGCCCACATCTCCAGAGATGC...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGTGTGGGGAATGGAGTTaGGTGGGGGAGAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLCGEWS*VGERTF
Trigger: GAAGGTTCTCTCCCCCACCCAACTCCATTCCCCACA...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCTGTGGGGAATGGAGTTaGGTGGGGGAGAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGCGEWS*VGERTF
Trigger: GAAGGTTCTCTCCCCCACCCAACTCCATTCCCCACA...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCACTCCCTTTCTTGCTGTaGGGAATGGAGTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRALPFLL*GMELGG
Trigger: CCCACCCAACTCCATTCCCCACAGCAAGAAAGGGAG...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCACTGCCACCAATAGGATaGGCTGGGACGATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRALPPIG*AGTMPS
Trigger: AGAAGGCATCGTCCCAGCCCATCCTATTGGTGGCAG...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCCTGCCACCAATAGGATaGGCTGGGACGATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSILPPIG*AGTMPS
Trigger: AGAAGGCATCGTCCCAGCCCATCCTATTGGTGGCAG...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGGGAGCCACTCACTGTaGAGGAATGCCTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGGSHSL*RNACFC
Trigger: ACAGAAACAGGCATTCCTCCACAGTGAGTGGCTCCC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 72 bp AATCCAAACCTTTCCAATCCCTTCAGCTCCTGGGTGTaGAGGGACACCTCCTGCACAAACGCTCTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: NPNLSNPFSSWV*RDTSCTNALAS
Trigger: GCTTGCAAGAGCGTTTGTGCAGGAGGTGTCCCTCAACACCCAGGAGCTGAAGGGATTGGAAAGGTTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
3UTR CAA 72 bp GCTGGATCCAGCATCAGCATGCGACGTACTAGGTCTTaGGCACTTTCAGAGATATGGCTCCACTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: AGSSISMRRTRS*ALSEIWLHCLG
Trigger: TCCAAGGCAGTGGAGCCATATCTCTGAAAGTGCCAAAGACCTAGTACGTCGCATGCTGATGCTGGATCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647118.2
CDS-3UTR TCA 90 bp TGTGCCATAGCCATGGCTGCTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAGCACCCTGGACTTGATGTaGACTTGGCTACATCAACAA +
Preference number: 4 (lower is better)
Translates to: CAIAMAAPSLRLGPLLFSTLDLM*TWLHQQ
Trigger: TTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGT...GCTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCAGCCATGGCTATGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644770.1
CDS-3UTR TCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGGATGTTTCAGCATATaGCAGATACTGGCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGGCFSI*QILASR
Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAACATCC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CAGGATAAAAAGGATCACACCGCACCCCCAGACGTCTACAGGCTTTCCGTAAGGCCAGACTCCCCTAATTaGATAGCTACCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QDKKDHTAPPDVYRLSVRPDSPN*IATPKP
Trigger: AGGCTTTGGGGTAGCTATTCAATTAGGGGAGTCTGG...CCTTACGGAAAGCCTGTAGACGTCTGGGGGTGCGGTGTGATCCTTTTTATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000647118.2
CDS-3UTR TCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGCTGTCCAGCACCTGTaGGACTGCTCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRAVQHL*DCSFCC
Trigger: GCAGCAGAAAGAGCAGTCTCACAGGTGCTGGACAGC...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378154.3
ENST00000378163.7
ENST00000378168.8
ENST00000645566.1
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCACAGTCTGTAAGCGCATaGATCTCTTCCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAQSVSA*ISSRLS
Trigger: GGACAGCCTGGAAGAGATTCATGCGCTTACAGACTG...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATAGGTGGGAGGAGGTGTaGCCCTCAATGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDRWEEV*PSMLHH
Trigger: GTGATGAAGCATTGAGGGTCACACCTCCTCCCACCT...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGAGGTGGGAGGAGGTGTaGCCCTCAATGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGERWEEV*PSMLHH
Trigger: GTGATGAAGCATTGAGGGTCACACCTCCTCCCACCT...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCGCTACTCGCCATTCCTaGAGTTCAGGAGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGATRHS*SSGEGM
Trigger: CATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGC...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCGGGACCATGACCTGCTaGCACAAGGCCGATAACAAA +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSIGTMTC*HKADNK
Trigger: TTTGTTATCGGCCTTGTGTCAGCAGGTCATGGTCCC...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCACCTGGGTGTGCCCCATaGACGGAATGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAPGCAP*TECRMY
Trigger: GTACATTCTACATTCCGTTCATGGGGCACACCCAGG...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGCCTGGGTGTGCCCCATaGACGGAATGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLPGCAP*TECRMY
Trigger: GTACATTCTACATTCCGTTCATGGGGCACACCCAGG...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGCAGGTTCGAGGGAGTTaGTGGAGGGTCAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: QRGFSTNEVLPVMLRYLGQVRGS*WRVRRE
Trigger: CTCTCGTCTGACCCTCCATCAACTCCCTCGAACCTG...CCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCACCTGCCTGCACAGATaGCATTCCGGGAAACAGCTA +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGTCLHR*HSGKQL
Trigger: TAGCTGTTTCCCGGAATGTCATCTGTGCAGGCAGGT...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp AAAGAGTCTGAGAACCCCAGCCCGAATCTCCTGTATTGGAAGAATGTGACTTCATCGGGTCTTAGCACGTaGGGATTGGGCGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KESENPSPNLLYWKNVTSSGLST*GLGGLH
Trigger: GTGAAGGCCGCCCAATCCTCACGTGCTAAGACCCGA...TGAAGTCACATTCTTCCAATACAGGAGATTCGGGCTGGGGTTCTCAGACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGCTCCTGGGTGTTaGGGGACACCTCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCSAPGC*GTPPAQ
Trigger: TTGTGCAGGAGGTGTCCCTCAACACCCAGGAGCTGA...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGATCAGCTCCTGGGTGTTaGGGGACACCTCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRSAPGC*GTPPAQ
Trigger: TTGTGCAGGAGGTGTCCCTCAACACCCAGGAGCTGA...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGTTCAAAACACAGATCTaGTCCATCCATAAATTCGAA +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRFKTQI*SIHKFE
Trigger: TTCGAATTTATGGATGGAGCAGATCTGTGTTTTGAA...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CAGGATAAAAAGGATCACACCGCACCCCCAGACGTCTACAGGCTTTCCGTAAGGGATCCAGCATCAGCATaGGACGTACTAGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QDKKDHTAPPDVYRLSVRDPASA*DVLGLW
Trigger: CCAAAGACCTAGTACGTCGCATGCTGATGCTGGATC...CCTTACGGAAAGCCTGTAGACGTCTGGGGGTGCGGTGTGATCCTTTTTATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647118.2
CDS-3UTR GCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGTTTGGCTCTCTGTACTaGATCGCTTGGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLFGSLY*IAWRIP
Trigger: AGGAATCCTCCAAGCGATGCAGTACAGAGAGCCAAA...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGATCGCATCCTCGTGGCTaGCGTACTCCAAGTACTCGT +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRSHPRG*RTPSTR
Trigger: ACGAGTACTTGGAGTACGGCAGCCACGAGGATGCGA...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTCCACGTCCAGTATTaGAATCAGCCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYLHVQY*NQPLLV
Trigger: CACGAGCAGGGGCTGATTGCAATACTGGACGTGGAG...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATCTCCACGTCCAGTATTaGAATCAGCCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDLHVQY*NQPLLV
Trigger: CACGAGCAGGGGCTGATTGCAATACTGGACGTGGAG...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGATCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRSQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGTCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: QRGFSTNEVLPVMLRYLGSQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...CCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGCCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: QRGFSTNEVLPVMLRYLGPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...CCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGACCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp GCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAAGGGATCAGGAAAATGCAAGGGATGTaGATAGGTTTACAACTTAGT +
Preference number: 4 (lower is better)
Translates to: AGSAPAFWLFRRQGKGIRKMQGM*IGLQLS
Trigger: ACTAAGTTGTAAACCTATGCACATCCCTTGCATTTT...CCTGATCCCTTTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCTCAGAACACACCCTaGACATCCTGCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEAQNTP*TSCQGT
Trigger: TGTGCCTTGGCAGGATGTGCAGGGTGTGTTCTGAGC...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCGGCAAGAATGATGCCTaGCTGTGTGCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSIGKNDA*LCASQR
Trigger: CCTCTGAGAAGCACACAGGCAGGCATCATTCTTGCC...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGAAAGGTAACAGTAGCTaGAGCCCAGGCCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEKGNSS*SPGLPG
Trigger: TCCAGGCAGGCCTGGGCTGCAGCTACTGTTACCTTT...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATTGGCCCCAGAGATGGTaGGGCCCTCTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDWPQRW*GPLSTS
Trigger: AGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCA...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGATGGCCCCAGAGATGGTaGGGCCCTCTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRWPQRW*GPLSTS
Trigger: AGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCA...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCGCAGAGATGGAGTTGTaGTTGGGGCCAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSAEMEL*LGPERR
Trigger: CCTCCTTTCTGGCCCCAAGCACAACTCCATCTCTGC...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACAAGCCGCCTACCTGCCTaGACAGATGACATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTSRLPA*TDDIPG
Trigger: TCCCGGAATGTCATCTGTGCAGGCAGGTAGGCGGCT...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCACATCAACTTGTACTGTaGCGGCAGCGCACCAGCATT +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAHQLVL*RQRTSI
Trigger: AATGCTGGTGCGCTGCCGGCACAGTACAAGTTGATG...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GCCATAGCCATGGCTGCTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAGCCAGGCATATGACAGATACTaGCTTCCCGCTTTAGATCTT +
Preference number: 4 (lower is better)
Translates to: AIAMAAPSLRLGPLLFSQAYDRY*LPALDL
Trigger: AAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGC...CTGGCTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCAGCCATGGCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644770.1
CDS-3UTR CCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAATGGCTCCACTGCCTTaGATTCATCTTATATTTTCC +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQMAPLP*IHLIFS
Trigger: GGAAAATATAAGATGAATCCAAGGCAGTGGAGCCAT...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCCTGCTGCTCCTGTTTaGTCTTCTCCATGGCAATGC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGPAAPV*SSPWQC
Trigger: GCATTGCCATGGAGAAGACCAAACAGGAGCAGCAGG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp GTTTTTCAGGGGCAGTTTCCACGCTGGGAATCTTCCTGGAGGGTGGTTCAATTGCCTGCTGCTCCTGTTTaGTCTTCTCCATGGCAATGC +
Preference number: 4 (lower is better)
Translates to: VFQGQFPRWESSWRVVQLPAAPV*SSPWQC
Trigger: GCATTGCCATGGAGAAGACCAAACAGGAGCAGCAGG...CAATTGAACCACCCTCCAGGAAGATTCCCAGCGTGGAAACTGCCCCTGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCACCTGCTGCTCCTGTTTaGTCTTCTCCATGGCAATGC +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAPAAPV*SSPWQC
Trigger: GCATTGCCATGGAGAAGACCAAACAGGAGCAGCAGG...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCAAACCAAGTACAGCTaGCCTGCTGCTCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGQTKYS*PAAPVW
Trigger: CCAAACAGGAGCAGCAGGCCAGCTGTACTTGGTTTG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGGTACGCAAACCGGTCTaGGTGCTTTGTGATGAGAGT +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLVRKPV*VLCDES
Trigger: ACTCTCATCACAAAGCACCCAGACCGGTTTGCGTAC...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAATCAGCCCCTGCTCGTaGATCTTCCGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRISPCS*IFRMVS
Trigger: GGAGACCATCCGGAAGATCCACGAGCAGGGGCTGAT...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCATCAGCCCCTGCTCGTaGATCTTCCGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCISPCS*IFRMVS
Trigger: GGAGACCATCCGGAAGATCCACGAGCAGGGGCTGAT...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp TACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGACTGATCAGCCCCTGCTCGTaGATCTTCCGGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: YRLFCPTQTHRQHKRSRLISPCS*IFRMVS
Trigger: GGAGACCATCCGGAAGATCCACGAGCAGGGGCTGAT...CAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR CCA 90 bp AACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGACAGGGACCCACTGTaGGGCTGTGCACACGAGCTC +
Preference number: 4 (lower is better)
Translates to: NKEAFPQMRCSQLCSDIWDRDPL*GCAHEL
Trigger: GAGCTCGTGTGCACAGCCCCACAGTGGGTCCCTGTC...CCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR CCA 90 bp TACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGACTGTGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: YRLFCPTQTHRQHKRSRLCASQT*SSCALA
Trigger: TGCCAGAGCACAGCTGGACCACGTCTGACTCGCACA...CAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACATGTGCGAGTCAGACGTaGTCCAGCTGTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTCASQT*SSCALA
Trigger: TGCCAGAGCACAGCTGGACCACGTCTGACTCGCACA...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AGCACTTCACACCCTCACATGCTAATGAAAAACATTCTACTGACCTCTGGCAAACCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: STSHPHMLMKNILLTSGKPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...TTTGCCAGAGGTCAGTAGAATGTTTTTCATTAGCATGTGAGGGTGTGAAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp ACAGGTAACATCTTTGAGAAGTCAATGAGTTCTGCATGCAGGGATTTCACCATCCCTCCAGTACACCCGTaGCCCTTGGGCGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: TGNIFEKSMSSACRDFTIPPVHP*PLGAWL
Trigger: GAGCCATGCGCCCAAGGGCCACGGGTGTACTGGAGG...GATGGTGAAATCCCTGCATGCAGAACTCATTGACTTCTCAAAGATGTTACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTTTAATAATAGGCGGTaGGGGGCGGAGGCGGGTATG +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASIFNNRR*GAEAGM
Trigger: CATACCCGCCTCCGCCCCCCACCGCCTATTATTAAA...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCCCAGGAACGACTGTCTaGCCTTGGCATCTATCAGAT +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGPGTTV*PWHLSD
Trigger: ATCTGATAGATGCCAAGGCCAGACAGTCGTTCCTGG...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCTCCCTTTCTTGCTGTaGGGAATGGAGTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYLPFLL*GMELGG
Trigger: CCCACCCAACTCCATTCCCCACAGCAAGAAAGGGAG...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCTACTTCTGTTTCTGTaGGCTCTGTCTGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGLLLFL*ALSAHL
Trigger: CAGGTGGGCAGACAGAGCCCACAGAAACAGAAGTAG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACATGCTGGCCCCAGAGATaGTGCGGCCCTCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTCWPQR*CGPLST
Trigger: AGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCA...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAAGATGGAGTTGTGCTTaGGGCCAGAAAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRARWSCA*GQKGGL
Trigger: GAGACCTCCTTTCTGGCCCCAAGCACAACTCCATCT...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCTTAGCACGTGAGGATTaGGCGGCCTTCACATCAGTC +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSILARED*AAFTSV
Trigger: GACTGATGTGAAGGCCGCCCAATCCTCACGTGCTAA...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAAGCGCACCAGCATTCTaGTTGTTCCGGCGACAGGGC +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSSAPAF*LFRRQG
Trigger: GCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCT...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR CCA 90 bp TTCTACTGCAGTGGGGGACTTTGCGACATCTTTAGATATTCTGCCACCAATAGGAGCGCACCAGCATTCTaGTTGTTCCGGCGACAGGGC +
Preference number: 4 (lower is better)
Translates to: FYCSGGLCDIFRYSATNRSAPAF*LFRRQG
Trigger: GCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCT...CCTATTGGTGGCAGAATATCTAAAGATGTCGCAAAGTCCCCCACTGCAGTAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCATCGTCGTACAACACTaGAGGGACCCTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGIVVQH*RDPFRS
Trigger: TGATCGGAAAGGGTCCCTTCAGTGTTGTACGACGAT...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCGGATGTTTCAGCATATaGCAGATACTGGCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGGCFSI*QILASR
Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAACATCC...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCGGATGTTTCAGCATATaGCAGATACTGGCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSIGCFSI*QILASR
Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAACATCC...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCTGCCGAGTTTTCTTTTaGGGCAAGGAGAACACAGTG +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGCRVFF*GKENTV
Trigger: CACTGTGTTCTCCTTGCCTCAAAAGAAAACTCGGCA...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp ATTGGACGGGGAACAGGAACACCTCCTGCATTTCTACTGCAGTGGGGGACTTTGTGCCGAGTTTTCTTTTaGGGCAAGGAGAACACAGTG +
Preference number: 4 (lower is better)
Translates to: IGRGTGTPPAFLLQWGTLCRVFF*GKENTV
Trigger: CACTGTGTTCTCCTTGCCTCAAAAGAAAACTCGGCA...CAAAGTCCCCCACTGCAGTAGAAATGCAGGAGGTGTTCCTGTTCCCCGTCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CAGGATAAAAAGGATCACACCGCACCCCCAGACGTCTACAGGCTTTCCGTAAGGTGCCGAGTTTTCTTTTaGGGCAAGGAGAACACAGTG +
Preference number: 4 (lower is better)
Translates to: QDKKDHTAPPDVYRLSVRCRVFF*GKENTV
Trigger: CACTGTGTTCTCCTTGCCTCAAAAGAAAACTCGGCA...CCTTACGGAAAGCCTGTAGACGTCTGGGGGTGCGGTGTGATCCTTTTTATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000647118.2
CDS-3UTR TCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCCCAGACTCCCCTAATTaGATAGCTACCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGPDSPN*IATPKP
Trigger: AGGCTTTGGGGTAGCTATTCAATTAGGGGAGTCTGG...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCTCTGGTGCCATAAAATaGGGTGTTCCAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGSGAIK*GVPTRP
Trigger: AGGACGTGTTGGAACACCTCATTTTATGGCACCAGA...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGCTGTCCAGCACCTGTaGGACTGCTCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSAVQHL*DCSFCC
Trigger: GCAGCAGAAAGAGCAGTCTCACAGGTGCTGGACAGC...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378154.3
ENST00000378163.7
ENST00000378168.8
ENST00000645566.1
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCAGTCTGTAAGCGCATaGATCTCTTCCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYQSVSA*ISSRLS
Trigger: GGACAGCCTGGAAGAGATTCATGCGCTTACAGACTG...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGCAGTCTGTAAGCGCATaGATCTCTTCCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEQSVSA*ISSRLS
Trigger: GGACAGCCTGGAAGAGATTCATGCGCTTACAGACTG...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGACAGTCTGTAAGCGCATaGATCTCTTCCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRQSVSA*ISSRLS
Trigger: GGACAGCCTGGAAGAGATTCATGCGCTTACAGACTG...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR TCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCCAGTCTGTAAGCGCATaGATCTCTTCCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASIQSVSA*ISSRLS
Trigger: GGACAGCCTGGAAGAGATTCATGCGCTTACAGACTG...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCAGGTGGGAGGAGGTGTaGCCCTCAATGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCRWEEV*PSMLHH
Trigger: GTGATGAAGCATTGAGGGTCACACCTCCTCCCACCT...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp CAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGGTGGGAGGAGGTGTaGCCCTCAATGCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: QRGFSTNEVLPVMLRYLGRWEEV*PSMLHH
Trigger: GTGATGAAGCATTGAGGGTCACACCTCCTCCCACCT...CCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAAGTGTACCTTGCCTGTaGATCATGCCCCCATGCATA +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRASVPCL*IMPPCI
Trigger: TATGCATGGGGGCATGATTCACAGGCAAGGTACACT...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCAGTGTACCTTGCCTGTaGATCATGCCCCCATGCATA +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGSVPCL*IMPPCI
Trigger: TATGCATGGGGGCATGATTCACAGGCAAGGTACACT...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCGCTACTCGCCATTCCTaGAGTTCAGGAGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSIATRHS*SSGEGM
Trigger: CATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGC...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GATGGCTTAAGACAGGCATCATCAGCATCTCTGGAGATGTGGGCTCAAAGGGCAGCTACTCGCCATTCCTaGAGTTCAGGAGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: DGLRQASSASLEMWAQRAATRHS*SSGEGM
Trigger: CATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGC...TGCCCTTTGAGCCCACATCTCCAGAGATGCTGATGATGCCTGTCTTAAGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGGGACCATGACCTGCTaGCACAAGGCCGATAACAAA +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRGTMTC*HKADNK
Trigger: TTTGTTATCGGCCTTGTGTCAGCAGGTCATGGTCCC...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR TCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGGGACCATGACCTGCTaGCACAAGGCCGATAACAAA +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEGTMTC*HKADNK
Trigger: TTTGTTATCGGCCTTGTGTCAGCAGGTCATGGTCCC...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR TCA 90 bp CAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGACCTGGGTGTGCCCCATaGACGGAATGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: QHRHTDSINARDCPHALRPGCAP*TECRMY
Trigger: GTACATTCTACATTCCGTTCATGGGGCACACCCAGG...TCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR TCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGCCTGGGTGTGCCCCATaGACGGAATGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEPGCAP*TECRMY
Trigger: GTACATTCTACATTCCGTTCATGGGGCACACCCAGG...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGAACACTGGCGTGTTCTCTCAGTCACACACCAGAGAGAATGGAGCTAACACATGTCACCCTGCCAACTaGTACTCACTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KNTGVFSQSHTRENGANTCHPAN*YSLLGL
Trigger: AAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACA...TGTGTTAGCTCCATTCTCTCTGGTGTGTGACTGAGAGAACACGCCAGTGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CGACGTGCCTACACTGCAATTAAACACGATACTCGGGTCTTAGCACGTGAGGATGTGCTACAGTGCTTGTaGATTGTGGGGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: RRAYTAIKHDTRVLAREDVLQCL*IVGPQT
Trigger: TGTCTGTGGCCCCACAATTCACAAGCACTGTAGCAC...ATCCTCACGTGCTAAGACCCGAGTATCGTGTTTAATTGCAGTGTAGGCACGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGTGCTACAGTGCTTGTaGATTGTGGGGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: EAFPQMRCSQLCSDIWGEVLQCL*IVGPQT
Trigger: TGTCTGTGGCCCCACAATTCACAAGCACTGTAGCAC...CTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp TTTGTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCGTGCTACAGTGCTTGTaGATTGTGGGGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: FVTLPTDTHSWAFKGSMSVLQCL*IVGPQT
Trigger: TGTCTGTGGCCCCACAATTCACAAGCACTGTAGCAC...GCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CTAAGACTTAGGAGTGCTGGCCCCAGAGATGGTGCGGCCCTCTTTCTACTTCTGTGGGACGATGCCTTCTaGATGCAAATAGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LRLRSAGPRDGAALFLLLWDDAF*MQIARS
Trigger: ACTTCTTGCTATTTGCATTCAGAAGGCATCGTCCCA...CAGAAGTAGAAAGAGGGCCGCACCATCTCTGGGGCCAGCACTCCTAAGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GTCACCCTGCCAACTGATACTCACTCCTGGGCCTTCAAAGGTTCAATGAGCATCCTTCCTGGATGTAGGTaGCAGCTAAACTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: VTLPTDTHSWAFKGSMSILPGCR*QLNFTH
Trigger: GTGGGTGAAGTTTAGCTGTCACCTACATCCAGGAAG...GATGCTCATTGAACCTTTGAAGGCCCAGGAGTGAGTATCAGTTGGCAGGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCACAGGTTCGAGGGAGTTaGTGGAGGGTCAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSQVRGS*WRVRRE
Trigger: CTCTCGTCTGACCCTCCATCAACTCCCTCGAACCTG...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATACCTGCCTGCACAGATaGCATTCCGGGAAACAGCTA +
Preference number: 4 (lower is better)
Translates to: PKLWSVPYQERLSGLGIYTCLHR*HSGKQL
Trigger: TAGCTGTTTCCCGGAATGTCATCTGTGCAGGCAGGT...ATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCATCTATCACCTGCCTGCACAGATaGCATTCCGGGAAACAGCTA +
Preference number: 4 (lower is better)
Translates to: RNCGQYHTRNDCLALASITCLHR*HSGKQL
Trigger: TAGCTGTTTCCCGGAATGTCATCTGTGCAGGCAGGT...GATAGATGCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp CTTGTACTGTGCCGGCAGCGCACCAGCATTCTGGTTGTTCCGGCGACAGGGCAAGTCACACAAGATAACTaGTTAGGGTTTCATCAACTT +
Preference number: 4 (lower is better)
Translates to: LVLCRQRTSILVVPATGQVTQDN*LGFHQL
Trigger: AAGTTGATGAAACCCTAATCAGTTATCTTGTGTGAC...TTGCCCTGTCGCCGGAACAACCAGAATGCTGGTGCGCTGCCGGCACAGTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644347.1
ENST00000675354.1
CDS-3UTR TCA 90 bp GCTGCTCCATCCCTGAGACTAGGTCCCTTGCTCTTCAGCCAGAAGGAGTCAGGGACATTCAAGTCATGCTaGGCTCAAAGCTGTATTAAG +
Preference number: 4 (lower is better)
Translates to: AAPSLRLGPLLFSQKESGTFKSC*AQSCIK
Trigger: CTTAATACAGCTTTGAGCTCAGCATGACTTGAATGT...CCCTGACTCCTTCTGGCTGAAGAGCAAGGGACCTAGTCTCAGGGATGGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644770.1
CDS-3UTR GCA 90 bp GACTGTCCACATGCATTAAGAGTCAAGACCCAACTTCAAATCTCTAAAAGGTTTCGCCCAAGAGCTCAGTaGCCAGCCCCGGGATCGCCT +
Preference number: 4 (lower is better)
Translates to: DCPHALRVKTQLQISKRFRPRAQ*PAPGSP
Trigger: AGGCGATCCCGGGGCTGGGCACTGAGCTCTTGGGCG...AAACCTTTTAGAGATTTGAAGTTGGGTCTTGACTCTTAATGCATGTGGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645986.2
ENST00000675354.1
CDS-3UTR GCA 90 bp GGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGAGGCGATCCAGCATCAGCATaGGACGTACTAGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GFSTNEVLPVMLRYLGRGDPASA*DVLGLW
Trigger: CCAAAGACCTAGTACGTCGCATGCTGATGCTGGATC...GCCTCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCAGGACGAAGACTGAGTaGGGTAACTTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGRTKTE*GNLAQS
Trigger: AGATTGTGCCAAGTTACCGCACTCAGTCTTCGTCCT...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGAGCCCGAAATTGTGGTCAGTACCATACCAGGAACGACTGTCTGGCCTTGGCTCTTCTCCATGGCAATaGAAGCTACTCGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: KSPKLWSVPYQERLSGLGSSPWQ*KLLAIP
Trigger: AGGAATGGCGAGTAGCTTGCATTGCCATGGAGAAGA...GCCAAGGCCAGACAGTCGTTCCTGGTATGGTACTGACCACAATTTCGGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378163.7
ENST00000378168.8
ENST00000421587.8
ENST00000644219.1
ENST00000644347.1
ENST00000675354.1
CDS-3UTR GCA 90 bp AGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGAGATCGCATCCTCGTGGCTaGCGTACTCCAAGTACTCGT +
Preference number: 4 (lower is better)
Translates to: RGFSTNEVLPVMLRYLGRSHPRG*RTPSTR
Trigger: ACGAGTACTTGGAGTACGGCAGCCACGAGGATGCGA...TCTCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp TACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGACTGTCGCATCCTCGTGGCTaGCGTACTCCAAGTACTCGT +
Preference number: 4 (lower is better)
Translates to: YRLFCPTQTHRQHKRSRLSHPRG*RTPSTR
Trigger: ACGAGTACTTGGAGTACGGCAGCCACGAGGATGCGA...CAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CACAAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCCTCCACGTCCAGTATTaGAATCAGCCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: HKADNKEAFPQMRCSQLCLHVQY*NQPLLV
Trigger: CACGAGCAGGGGCTGATTGCAATACTGGACGTGGAG...GCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp CAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGCTCCACGTCCAGTATTaGAATCAGCCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: QRGFSTNEVLPVMLRYLGLHVQY*NQPLLV
Trigger: CACGAGCAGGGGCTGATTGCAATACTGGACGTGGAG...CCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp TACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGACTGCTCCACGTCCAGTATTaGAATCAGCCCCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: YRLFCPTQTHRQHKRSRLLHVQY*NQPLLV
Trigger: CACGAGCAGGGGCTGATTGCAATACTGGACGTGGAG...CAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCATCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSSQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGATCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: KEAFPQMRCSQLCSDIWGSQDLQ*LRLHVQ
Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGA...TCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCAGATATCTGGGGACCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: KEAFPQMRCSQLCSDIWGPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...TCCCCAGATATCTGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp AAGGCCGATAACAAAGAGGCTTTTCCACAAATGAGGTGCTCCCAGTTATGCTCACCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: KADNKEAFPQMRCSQLCSPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...TGAGCATAACTGGGAGCACCTCATTTGTGGAAAAGCCTCTTTGTTATCGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000378154.3
ENST00000378158.6
ENST00000378163.7
ENST00000378166.9
ENST00000378168.8
ENST00000378179.9
ENST00000421587.8
ENST00000442742.7
ENST00000643733.1
ENST00000644219.1
ENST00000644347.1
ENST00000645566.1
ENST00000645986.2
ENST00000646087.2
ENST00000646120.2
ENST00000675354.1
CDS-3UTR GCA 90 bp GGGGTTTCCACTAGAGGGAGGGAAGTTTCTGTTTCCCATGTGTTAGTTGTAGTTCCCACTGTGGGGCTGTaGACACGAGCTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: GVSTRGREVSVSHVLVVVPTVGL*TRAQQL
Trigger: AAGCTGTTGAGCTCGTGTGCACAGCCCCACAGTGGG...AACTACAACTAACACATGGGAAACAGAAACTTCCCTCCCTCTAGTGGAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Match