Pregenerated sensors for CASC8 (Homo sapiens)
Ensembl gene IDs: ENSG00000246228Ensembl transcript IDs: ENST00000501396.5, ENST00000502056.1, ENST00000502082.5, ENST00000523825.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAACTTGAGCAGAGCTTAGTAGGGACAGCTTGTGTCTGCTTCATGTaGCATCAGCTGGGATGGCTCCACCAGGCAGGAGGATCGACGTTC | + |
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Preference number: 5 (lower is better) Translates to: QLEQSLVGTACVCFM*HQLGWLHQAGGSTF Trigger: GAACGTCGATCCTCCTGCCTGGTGGAGCCATCCCAGCTGATGCCACATGAAGCAGACACAAGCTGTCCCTACTAAGCTCTGCTCAAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS TCA 90 bp | GGTCCATGCCATTCATCAATTGGAAGAATGCCAAGCTGTTTCCGCTaGGGACAGAAGGCATTGGTCTCCCCTGCAGGAAGCCACTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GPCHSSIGRMPSCFR*GQKALVSPAGSHCC Trigger: GCAGCAGTGGCTTCCTGCAGGGGAGACCAATGCCTTCTGTCCTCAGCGGAAACAGCTTGGCATTCTTCCAATTGATGAATGGCATGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS GCA 90 bp | CAGCTGGAAGCCTTGCATCCTCTCCATAGGCTACTTGAGCTTTCTTaGAACCTGCACAGCCTTAGGACACTGCTCTCTGCATCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: QLEALHPLHRLLELS*NLHSLRTLLSASRP Trigger: TGGCCTGGATGCAGAGAGCAGTGTCCTAAGGCTGTGCAGGTTGCAAGAAAGCTCAAGTAGCCTATGGAGAGGATGCAAGGCTTCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS CCA 90 bp | TTAGTAGGGACAGCTTGTGTCTGCTTCATGTGGCATCAGCTGGGATaGCTCCACCAGGCAGGAGGATCGACGTTCAAGGTGGCTTATGCA | + |
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Preference number: 5 (lower is better) Translates to: LVGTACVCFMWHQLG*LHQAGGSTFKVAYA Trigger: TGCATAAGCCACCTTGAACGTCGATCCTCCTGCCTGGTGGAGCCATCCCAGCTGATGCCACATGAAGCAGACACAAGCTGTCCCTACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS GCA 90 bp | AAGCCTTGCATCCTCTCCATAGGCTACTTGAGCTTTCTTGCAACCTaGACAGCCTTAGGACACTGCTCTCTGCATCCAGGCCACTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: KPCILSIGYLSFLAT*TALGHCSLHPGHSS Trigger: ACTGGAGTGGCCTGGATGCAGAGAGCAGTGTCCTAAGGCTGTGCAGGTTGCAAGAAAGCTCAAGTAGCCTATGGAGAGGATGCAAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS GCA 90 bp | ATAGGCTACTTGAGCTTTCTTGCAACCTGCACAGCCTTAGGACACTaGTCTCTGCATCCAGGCCACTCCAGTTCCAGCCTCACTCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: IGYLSFLATCTALGH*SLHPGHSSSSLTQK Trigger: CTTTTGAGTGAGGCTGGAACTGGAGTGGCCTGGATGCAGAGAGCAGTGTCCTAAGGCTGTGCAGGTTGCAAGAAAGCTCAAGTAGCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS GCA 90 bp | ATGAATATCCAACTTGAGCAGAGCTTAGTAGGGACAGCTTGTGTCTaGTTCATGTGGCATCAGCTGGGATGGCTCCACCAGGCAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: MNIQLEQSLVGTACV*FMWHQLGWLHQAGG Trigger: TCCTCCTGCCTGGTGGAGCCATCCCAGCTGATGCCACATGAAGCAGACACAAGCTGTCCCTACTAAGCTCTGCTCAAGTTGGATATTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS GCA 90 bp | CCAAGATGCCAGGGCTACAGCAATCAACAAAACAGACAAAATCCCTaGCCTCGTGAAATGTACACTGTGGTGAGGCAGGTGAGGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PRCQGYSNQQNRQNP*PREMYTVVRQVRQA Trigger: TGCCTGCCTCACCTGCCTCACCACAGTGTACATTTCACGAGGGCAGGGATTTTGTCTGTTTTGTTGATTGCTGTAGCCCTGGCATCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS GCA 90 bp | ACTGGCCCGGTTATTCATGTGGCCTCTCATTGCTCCTTGGCTCACTaGATTGCAAGATTCAAGGATGCACTTCCAGGCCTCCACATCAAG | + |
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Preference number: 5 (lower is better) Translates to: TGPVIHVASHCSLAH*IARFKDALPGLHIK Trigger: CTTGATGTGGAGGCCTGGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CCA 90 bp | GCAAGGAGGAGGACATGTGTCTTGTCACTGGCCCGGTTATTCATGTaGCCTCTCATTGCTCCTTGGCTCACTGCATTGCAAGATTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ARRRTCVLSLARLFM*PLIAPWLTALQDSR Trigger: CCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTCCTCCTCCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CCA 90 bp | CATTCTGGTGTATACCAGCAAGGAGGAGGACATGTGTCTTGTCACTaGCCCGGTTATTCATGTGGCCTCTCATTGCTCCTTGGCTCACTG | + |
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Preference number: 5 (lower is better) Translates to: HSGVYQQGGGHVSCH*PGYSCGLSLLLGSL Trigger: CAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTCCTCCTCCTTGCTGGTATACACCAGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS TCA 90 bp | ACATGGCAGGTTGTGTGTCACGCCCTCCACTCATGTTTCATTGGCTaGAGCTCAATTGCATGGCTGTCCAATTGCAAGACAGTCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: TWQVVCHALHSCFIG*SSIAWLSNCKTVPE Trigger: CTCTGGGACTGTCTTGCAATTGGACAGCCATGCAATTGAGCTTCAGCCAATGAAACATGAGTGGAGGGCGTGACACACAACCTGCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS GCA 90 bp | AATGCCAAGCTGTTTCCGCTGAGGACAGAAGGCATTGGTCTCCCCTaGAGGAAGCCACTGCTGCTCCTTAATTGTTTGCTCTTTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NAKLFPLRTEGIGLP*RKPLLLLNCLLFLL Trigger: CAAGAGAAAGAGCAAACAATTAAGGAGCAGCAGTGGCTTCCTGCAGGGGAGACCAATGCCTTCTGTCCTCAGCGGAAACAGCTTGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS GCA 90 bp | CCCGGTTATTCATGTGGCCTCTCATTGCTCCTTGGCTCACTGCATTaGAAGATTCAAGGATGCACTTCCAGGCCTCCACATCAAGTCATA | + |
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Preference number: 5 (lower is better) Translates to: PGYSCGLSLLLGSLH*KIQGCTSRPPHQVI Trigger: TATGACTTGATGTGGAGGCCTGGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS GCA 90 bp | GACATGTGTCTTGTCACTGGCCCGGTTATTCATGTGGCCTCTCATTaGTCCTTGGCTCACTGCATTGCAAGATTCAAGGATGCACTTCCA | + |
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Preference number: 5 (lower is better) Translates to: DMCLVTGPVIHVASH*SLAHCIARFKDALP Trigger: TGGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CCA 90 bp | TTGAACATGGCAGGTTGTGTGTCACGCCCTCCACTCATGTTTCATTaGCTGAAGCTCAATTGCATGGCTGTCCAATTGCAAGACAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: LNMAGCVSRPPLMFH*LKLNCMAVQLQDSP Trigger: GGGACTGTCTTGCAATTGGACAGCCATGCAATTGAGCTTCAGCCAATGAAACATGAGTGGAGGGCGTGACACACAACCTGCCATGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS CCA 90 bp | CCAGCCTCACTCAAAAGGCCCCAGGTACAGTTCAGGTCACAGCTCTaGAAAGCACATTCTGTAAGCCTTGGTGGCTTCCATGTTGTATTA | + |
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Preference number: 5 (lower is better) Translates to: PASLKRPQVQFRSQL*KAHSVSLGGFHVVL Trigger: TAATACAACATGGAAGCCACCAAGGCTTACAGAATGTGCTTTCCAGAGCTGTGACCTGAACTGTACCTGGGGCCTTTTGAGTGAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS TCA 90 bp | ATGTTCATCAGCACAAAGCTGGAGGAGGGAAAGAGTATGGAGGCTTaGACATGGCAGGTTGTGTGTCACGCCCTCCACTCATGTTTCATT | + |
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Preference number: 5 (lower is better) Translates to: MFISTKLEEGKSMEA*TWQVVCHALHSCFI Trigger: AATGAAACATGAGTGGAGGGCGTGACACACAACCTGCCATGTTCAAGCCTCCATACTCTTTCCCTCCTCCAGCTTTGTGCTGATGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS TCA 90 bp | ACAGCATACCCTTCTGGTTCTCAAGGAGTTTCCAATGCAGATCTCTaGTCTGGAGTGCCTCTCTTCCTTTTTGCCCTGAAGGTAGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: TAYPSGSQGVSNADL*SGVPLFLFALKVVS Trigger: ACTGACTACCTTCAGGGCAAAAAGGAAGAGAGGCACTCCAGATCAGAGATCTGCATTGGAAACTCCTTGAGAACCAGAAGGGTATGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502056.1 |
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| CDS TCA 90 bp | TCCTTGCATTTTCTGGCTCTGCCATATTCAACACACCTTTCAAGGTaGCCATGTTCATCAGCACAAAGCTGGAGGAGGGAAAGAGTATGG | + |
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Preference number: 5 (lower is better) Translates to: SLHFLALPYSTHLSR*PCSSAQSWRRERVW Trigger: CCATACTCTTTCCCTCCTCCAGCTTTGTGCTGATGAACATGGTCACCTTGAAAGGTGTGTTGAATATGGCAGAGCCAGAAAATGCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS TCA 90 bp | TCCAAAATAGGGTTCCTGAGGAGCAAGTGGCTCTTCTTCAAGTGGTaGTCCAGAGAAGAAGCTCCTTGCATTTTCTGGCTCTGCCATATT | + |
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Preference number: 5 (lower is better) Translates to: SKIGFLRSKWLFFKW*SREEAPCIFWLCHI Trigger: AATATGGCAGAGCCAGAAAATGCAAGGAGCTTCTTCTCTGGATCACCACTTGAAGAAGAGCCACTTGCTCCTCAGGAACCCTATTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS GCA 90 bp | TCTAAACCCTCTTCAAGAGGCTGCAAACTCTTCAAAGACAGAAGCTaGTGTACGGATTTTTCACCTGCTTCAGTGCCATTGTCAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: SKPSSRGCKLFKDRS*CTDFSPASVPLSTA Trigger: TGCGGTTGACAATGGCACTGAAGCAGGTGAAAAATCCGTACAGCAGCTTCTGTCTTTGAAGAGTTTGCAGCCTCTTGAAGAGGGTTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CCA 90 bp | GTCTTTCTGGGCTCCTCACAGTTACAAAAATACAGCATACCCTTCTaGTTCTCAAGGAGTTTCCAATGCAGATCTCTGATCTGGAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: VFLGSSQLQKYSIPF*FSRSFQCRSLIWSA Trigger: GGCACTCCAGATCAGAGATCTGCATTGGAAACTCCTTGAGAACCAGAAGGGTATGCTGTATTTTTGTAACTGTGAGGAGCCCAGAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502056.1 |
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| CDS GCA 90 bp | AGTAAATATGTATTTAATGCTAACAGGTGCTGGCACTGCCCAAGATaGCAGGGCTACAGCAATCAACAAAACAGACAAAATCCCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: SKYVFNANRCWHCPR*QGYSNQQNRQNPCP Trigger: AGGGCAGGGATTTTGTCTGTTTTGTTGATTGCTGTAGCCCTGGCATCTTGGGCAGTGCCAGCACCTGTTAGCATTAAATACATATTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS TCA 72 bp | GTTGGTAGGCTAGTTCTGGCTGCTACTGAGCCTGGCTaGGGGCATCAGCTGGAAGCCTTGCATCCTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VGRLVLAATEPG*GHQLEALHPLH Trigger: ATGGAGAGGATGCAAGGCTTCCAGCTGATGCCCTCAGCCAGGCTCAGTAGCAGCCAGAACTAGCCTACCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS CCA 72 bp | TTCTGGCTGCTACTGAGCCTGGCTGAGGGCATCAGCTaGAAGCCTTGCATCCTCTCCATAGGCTACTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FWLLLSLAEGIS*KPCILSIGYLS Trigger: GCTCAAGTAGCCTATGGAGAGGATGCAAGGCTTCCAGCTGATGCCCTCAGCCAGGCTCAGTAGCAGCCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS CCA 72 bp | ACAGCTTGTGTCTGCTTCATGTGGCATCAGCTGGGATaGCTCCACCAGGCAGGAGGATCGACGTTCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TACVCFMWHQLG*LHQAGGSTFKV Trigger: CACCTTGAACGTCGATCCTCCTGCCTGGTGGAGCCATCCCAGCTGATGCCACATGAAGCAGACACAAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS CCA 72 bp | GATGGCTCCACCAGGCAGGAGGATCGACGTTCAAGGTaGCTTATGCACATGATCAGCAGGTTCGTTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: DGSTRQEDRRSR*LMHMISRFVGR Trigger: CCTACCAACGAACCTGCTGATCATGTGCATAAGCCACCTTGAACGTCGATCCTCCTGCCTGGTGGAGCCATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS CAA 72 bp | CAGCACAAAGCTGGAGGAGGGAAAGAGTATGGAGGCTaGAACATGGCAGGTTGTGTGTCACGCCCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: QHKAGGGKEYGG*NMAGCVSRPPL Trigger: GAGTGGAGGGCGTGACACACAACCTGCCATGTTCAAGCCTCCATACTCTTTCCCTCCTCCAGCTTTGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS CAA 90 bp | GCTGAGGGCATCAGCTGGAAGCCTTGCATCCTCTCCATAGGCTACTaGAGCTTTCTTGCAACCTGCACAGCCTTAGGACACTGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: AEGISWKPCILSIGY*SFLATCTALGHCSL Trigger: CAGAGAGCAGTGTCCTAAGGCTGTGCAGGTTGCAAGAAAGCTCAAGTAGCCTATGGAGAGGATGCAAGGCTTCCAGCTGATGCCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS CAA 90 bp | TGCGGGGCATTCTGGTGTATACCAGCAAGGAGGAGGACATGTGTCTaGTCACTGGCCCGGTTATTCATGTGGCCTCTCATTGCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CGAFWCIPARRRTCV*SLARLFMWPLIAPW Trigger: CCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTCCTCCTCCTTGCTGGTATACACCAGAATGCCCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS TCA 72 bp | AGCACAAAGCTGGAGGAGGGAAAGAGTATGGAGGCTTaGACATGGCAGGTTGTGTGTCACGCCCTCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: STKLEEGKSMEA*TWQVVCHALHS Trigger: TGAGTGGAGGGCGTGACACACAACCTGCCATGTTCAAGCCTCCATACTCTTTCCCTCCTCCAGCTTTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS GCA 72 bp | CTACTGAGCCTGGCTGAGGGCATCAGCTGGAAGCCTTaGATCCTCTCCATAGGCTACTTGAGCTTTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLSLAEGISWKP*ILSIGYLSFLA Trigger: TGCAAGAAAGCTCAAGTAGCCTATGGAGAGGATGCAAGGCTTCCAGCTGATGCCCTCAGCCAGGCTCAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS GCA 72 bp | GCCTTGCATCCTCTCCATAGGCTACTTGAGCTTTCTTaGAACCTGCACAGCCTTAGGACACTGCTCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ALHPLHRLLELS*NLHSLRTLLSA Trigger: TGCAGAGAGCAGTGTCCTAAGGCTGTGCAGGTTGCAAGAAAGCTCAAGTAGCCTATGGAGAGGATGCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS CCA 72 bp | TGTTCATCAGCACAAAGCTGGAGGAGGGAAAGAGTATaGAGGCTTGAACATGGCAGGTTGTGTGTCACGCCC | + |
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Preference number: 6 (lower is better) Translates to: CSSAQSWRRERV*RLEHGRLCVTP Trigger: GGGCGTGACACACAACCTGCCATGTTCAAGCCTCCATACTCTTTCCCTCCTCCAGCTTTGTGCTGATGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS CAA 90 bp | TGTCTTGTCACTGGCCCGGTTATTCATGTGGCCTCTCATTGCTCCTaGGCTCACTGCATTGCAAGATTCAAGGATGCACTTCCAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: CLVTGPVIHVASHCS*AHCIARFKDALPGL Trigger: GAGGCCTGGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 90 bp | CAAAGCTGGAGGAGGGAAAGAGTATGGAGGCTTGAACATGGCAGGTaGTGTGTCACGCCCTCCACTCATGTTTCATTGGCTGAAGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: QSWRRERVWRLEHGR*CVTPSTHVSLAEAQ Trigger: TTGAGCTTCAGCCAATGAAACATGAGTGGAGGGCGTGACACACAACCTGCCATGTTCAAGCCTCCATACTCTTTCCCTCCTCCAGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS CAA 90 bp | GCCCGGTTATTCATGTGGCCTCTCATTGCTCCTTGGCTCACTGCATaGCAAGATTCAAGGATGCACTTCCAGGCCTCCACATCAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: ARLFMWPLIAPWLTA*QDSRMHFQASTSSH Trigger: ATGACTTGATGTGGAGGCCTGGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 90 bp | GGACATGTGTCTTGTCACTGGCCCGGTTATTCATGTGGCCTCTCATaGCTCCTTGGCTCACTGCATTGCAAGATTCAAGGATGCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: GHVSCHWPGYSCGLS*LLGSLHCKIQGCTS Trigger: GGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS TCA 72 bp | GGGTTCCTGAGGAGCAAGTGGCTCTTCTTCAAGTGGTaGTCCAGAGAAGAAGCTCCTTGCATTTTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GFLRSKWLFFKW*SREEAPCIFWL Trigger: GAGCCAGAAAATGCAAGGAGCTTCTTCTCTGGATCACCACTTGAAGAAGAGCCACTTGCTCCTCAGGAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501396.5 ENST00000502082.5 ENST00000523825.1 |
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| CDS TCA 72 bp | CATTCATCAATTGGAAGAATGCCAAGCTGTTTCCGCTaGGGACAGAAGGCATTGGTCTCCCCTGCAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: HSSIGRMPSCFR*GQKALVSPAGS Trigger: GCTTCCTGCAGGGGAGACCAATGCCTTCTGTCCTCAGCGGAAACAGCTTGGCATTCTTCCAATTGATGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS GCA 72 bp | GTGCTCCTGGTCCATGCCATTCATCAATTGGAAGAATaGCAAGCTGTTTCCGCTGAGGACAGAAGGCATTGG | + |
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Preference number: 6 (lower is better) Translates to: VLLVHAIHQLEE*QAVSAEDRRHW Trigger: CCAATGCCTTCTGTCCTCAGCGGAAACAGCTTGGCATTCTTCCAATTGATGAATGGCATGGACCAGGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS GCA 72 bp | TCATGTGGCCTCTCATTGCTCCTTGGCTCACTGCATTaGAAGATTCAAGGATGCACTTCCAGGCCTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: SCGLSLLLGSLH*KIQGCTSRPPH Trigger: ATGTGGAGGCCTGGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CCA 72 bp | AGGACATGTGTCTTGTCACTGGCCCGGTTATTCATGTaGCCTCTCATTGCTCCTTGGCTCACTGCATTGCAA | + |
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Preference number: 6 (lower is better) Translates to: RTCVLSLARLFM*PLIAPWLTALQ Trigger: TTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CCA 72 bp | GTATACCAGCAAGGAGGAGGACATGTGTCTTGTCACTaGCCCGGTTATTCATGTGGCCTCTCATTGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VYQQGGGHVSCH*PGYSCGLSLLL Trigger: AAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTCCTCCTCCTTGCTGGTATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 72 bp | AGGAGGGAAAGAGTATGGAGGCTTGAACATGGCAGGTaGTGTGTCACGCCCTCCACTCATGTTTCATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RRERVWRLEHGR*CVTPSTHVSLA Trigger: AGCCAATGAAACATGAGTGGAGGGCGTGACACACAACCTGCCATGTTCAAGCCTCCATACTCTTTCCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS CAA 72 bp | TTCATGTGGCCTCTCATTGCTCCTTGGCTCACTGCATaGCAAGATTCAAGGATGCACTTCCAGGCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: FMWPLIAPWLTA*QDSRMHFQAST Trigger: TGTGGAGGCCTGGAAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 90 bp | CATGTTCATCAGCACAAAGCTGGAGGAGGGAAAGAGTATGGAGGCTaGAACATGGCAGGTTGTGTGTCACGCCCTCCACTCATGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: HVHQHKAGGGKEYGG*NMAGCVSRPPLMFH Trigger: ATGAAACATGAGTGGAGGGCGTGACACACAACCTGCCATGTTCAAGCCTCCATACTCTTTCCCTCCTCCAGCTTTGTGCTGATGAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS GCA 72 bp | CTTGTCACTGGCCCGGTTATTCATGTGGCCTCTCATTaGTCCTTGGCTCACTGCATTGCAAGATTCAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LVTGPVIHVASH*SLAHCIARFKD Trigger: ATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 72 bp | TTTCATTGGCTGAAGCTCAATTGCATGGCTGTCCAATaGCAAGACAGTCCCAGAGATGGTGAGCTCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FHWLKLNCMAVQ*QDSPRDGELRR Trigger: CCTCCTGAGCTCACCATCTCTGGGACTGTCTTGCAATTGGACAGCCATGCAATTGAGCTTCAGCCAATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS CAA 72 bp | ACGCCCTCCACTCATGTTTCATTGGCTGAAGCTCAATaGCATGGCTGTCCAATTGCAAGACAGTCCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TPSTHVSLAEAQ*HGCPIARQSQR Trigger: TCTCTGGGACTGTCTTGCAATTGGACAGCCATGCAATTGAGCTTCAGCCAATGAAACATGAGTGGAGGGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS CAA 72 bp | ACTGGCCCGGTTATTCATGTGGCCTCTCATTGCTCCTaGGCTCACTGCATTGCAAGATTCAAGGATGCACTT | + |
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Preference number: 6 (lower is better) Translates to: TGPVIHVASHCS*AHCIARFKDAL Trigger: AAGTGCATCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 72 bp | TCTTGTCACTGGCCCGGTTATTCATGTGGCCTCTCATaGCTCCTTGGCTCACTGCATTGCAAGATTCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SCHWPGYSCGLS*LLGSLHCKIQG Trigger: TCCTTGAATCTTGCAATGCAGTGAGCCAAGGAGCAATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 72 bp | TTCTGGTGTATACCAGCAAGGAGGAGGACATGTGTCTaGTCACTGGCCCGGTTATTCATGTGGCCTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: FWCIPARRRTCV*SLARLFMWPLI Trigger: AATGAGAGGCCACATGAATAACCGGGCCAGTGACAAGACACATGTCCTCCTCCTTGCTGGTATACACCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 90 bp | GGCATTGGTCTCCCCTGCAGGAAGCCACTGCTGCTCCTTAATTGTTaGCTCTTTCTCTTGCTCTCTCTCTCTCATTACATGGCCCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: GIGLPCRKPLLLLNC*LFLLLSLSHYMALY Trigger: ATAAAGGGCCATGTAATGAGAGAGAGAGAGCAAGAGAAAGAGCAAACAATTAAGGAGCAGCAGTGGCTTCCTGCAGGGGAGACCAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS TCA 72 bp | GTTGTGTGTCACGCCCTCCACTCATGTTTCATTGGCTaGAGCTCAATTGCATGGCTGTCCAATTGCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: VVCHALHSCFIG*SSIAWLSNCKT Trigger: TGTCTTGCAATTGGACAGCCATGCAATTGAGCTTCAGCCAATGAAACATGAGTGGAGGGCGTGACACACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501396.5 ENST00000523825.1 |
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| CDS TCA 72 bp | CCTTCTGGTTCTCAAGGAGTTTCCAATGCAGATCTCTaGTCTGGAGTGCCTCTCTTCCTTTTTGCCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PSGSQGVSNADL*SGVPLFLFALK Trigger: CTTCAGGGCAAAAAGGAAGAGAGGCACTCCAGATCAGAGATCTGCATTGGAAACTCCTTGAGAACCAGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502056.1 |
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| CDS CAA 72 bp | CTCCCCTGCAGGAAGCCACTGCTGCTCCTTAATTGTTaGCTCTTTCTCTTGCTCTCTCTCTCTCATTACATG | + |
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Preference number: 6 (lower is better) Translates to: LPCRKPLLLLNC*LFLLLSLSHYM Trigger: CATGTAATGAGAGAGAGAGAGCAAGAGAAAGAGCAAACAATTAAGGAGCAGCAGTGGCTTCCTGCAGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 72 bp | CACCTGCTTCAGTGCCATTGTCAACCGCAACACTGGTaGTGTTTAATGGTGATGGAATTCTGTCACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HLLQCHCQPQHW*CLMVMEFCHFH Trigger: GTGGAAGTGACAGAATTCCATCACCATTAAACACAACCAGTGTTGCGGTTGACAATGGCACTGAAGCAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 72 bp | ATCAGCTGGAAGCCTTGCATCCTCTCCATAGGCTACTaGAGCTTTCTTGCAACGTCAGTCCAAAATAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: ISWKPCILSIGY*SFLATSVQNRV Trigger: AACCCTATTTTGGACTGACGTTGCAAGAAAGCTCAAGTAGCCTATGGAGAGGATGCAAGGCTTCCAGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502082.5 ENST00000523825.1 |
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| CDS CAA 90 bp | TTGTGTTTAATGGTGATGGAATTCTGTCACTTCCACCAACACTTTTaGAGCATTCGCTGCATGCGGGGCATTCTGGTGTATACCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LCLMVMEFCHFHQHF*SIRCMRGILVYTSK Trigger: CTTGCTGGTATACACCAGAATGCCCCGCATGCAGCGAATGCTCAAAAAGTGTTGGTGGAAGTGACAGAATTCCATCACCATTAAACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS GCA 72 bp | GCTCAGAAGCTGAAGATAACTAGTGCTCCTGGTCCATaGCATTCATCAATTGGAAGAATGCCAAGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AQKLKITSAPGP*HSSIGRMPSCF Trigger: GAAACAGCTTGGCATTCTTCCAATTGATGAATGGCATGGACCAGGAGCACTAGTTATCTTCAGCTTCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CCA 72 bp | CAGGTCACAGCTCTGGAAAGCACATTCTGTAAGCCTTaGTGGCTTCCATGTTGTATTAAACGTCAGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: QVTALESTFCKP*WLPCCIKRQSK Trigger: TTTGGACTGACGTTTAATACAACATGGAAGCCACCAAGGCTTACAGAATGTGCTTTCCAGAGCTGTGACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS CCA 72 bp | GTCACAGCTCTGGAAAGCACATTCTGTAAGCCTTGGTaGCTTCCATGTTGTATTAAACGTCAGTCCAAAATA | + |
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Preference number: 6 (lower is better) Translates to: VTALESTFCKPW*LPCCIKRQSKI Trigger: TATTTTGGACTGACGTTTAATACAACATGGAAGCCACCAAGGCTTACAGAATGTGCTTTCCAGAGCTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501396.5 |
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| CDS CAA 72 bp | TCTGATTCTCTTCCTTCCAGATACCTCCTTATGCTTTaGAACTCAATTGTTGCCATGGGCTTGATTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SDSLPSRYLLML*NSIVAMGLIWP Trigger: TGGCCAAATCAAGCCCATGGCAACAATTGAGTTCAAAAGCATAAGGAGGTATCTGGAAGGAAGAGAATCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502056.1 |
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| CDS CAA 90 bp | TTGCTCTTTCTCTTGCTCTCTCTCTCTCATTACATGGCCCTTTATTaGTGCAACAATTCATTTTCCTACTTCTCTATGAAGGTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLFLLLSLSHYMALY*CNNSFSYFSMKVSL Trigger: AAGAGAGACCTTCATAGAGAAGTAGGAAAATGAATTGTTGCACAAATAAAGGGCCATGTAATGAGAGAGAGAGAGCAAGAGAAAGAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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| CDS CAA 72 bp | CTCTTGCTCTCTCTCTCTCATTACATGGCCCTTTATTaGTGCAACAATTCATTTTCCTACTTCTCTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLLSLSHYMALY*CNNSFSYFSMK Trigger: CTTCATAGAGAAGTAGGAAAATGAATTGTTGCACAAATAAAGGGCCATGTAATGAGAGAGAGAGAGCAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502056.1 ENST00000502082.5 |
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