Pregenerated sensors for CASC22 (Homo sapiens)
Ensembl gene IDs: ENSG00000260887Ensembl transcript IDs: ENST00000569713.1, ENST00000628396.1, ENST00000653084.1, ENST00000656784.1, ENST00000660275.1, ENST00000661626.1, ENST00000661876.1, ENST00000662008.1, ENST00000665777.1, ENST00000668506.1, ENST00000668976.1, ENST00000670500.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCTCATTGGTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTaGGATCATGGGTGGTGGTCTGGGATCTCCTCTTTGCAGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GSLVLNSASLLLPPA*DHGWWSGISSLQGA Trigger: TGCACCCTGCAAAGAGGAGATCCCAGACCACCACCCATGATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGACCAATGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661876.1 |
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| CDS GCA 90 bp | GCTCTCCCAGTGGAAACCCAGCTACTCTGCCAACACTCCTTGCTGTaGAGCCTTCAAGGAGGGCTTCCTCTTAGCTGCAATGCAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ALPVETQLLCQHSLL*SLQGGLPLSCNAAL Trigger: CAAGGCTGCATTGCAGCTAAGAGGAAGCCCTCCTTGAAGGCTGCACAGCAAGGAGTGTTGGCAGAGTAGCTGGGTTTCCACTGGGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS GCA 90 bp | CTCGTGCTCTCCCAGTGGAAACCCAGCTACTCTGCCAACACTCCTTaGTGTGCAGCCTTCAAGGAGGGCTTCCTCTTAGCTGCAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: LVLSQWKPSYSANTP*CAAFKEGFLLAAMQ Trigger: CTGCATTGCAGCTAAGAGGAAGCCCTCCTTGAAGGCTGCACAGCAAGGAGTGTTGGCAGAGTAGCTGGGTTTCCACTGGGAGAGCACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CCA 90 bp | ATCCCGGGTCCAGTTCCAGACTGCTTTGCAGCCAAGCTTCTTCTTTaGCAGGGTTTGCCAGTGCTTTGTCATGGGGGAAGGAGGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: IPGPVPDCFAAKLLL*QGLPVLCHGGRRVG Trigger: TCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTGGAACTGGACCCGGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS CCA 90 bp | GGCTCATTGGTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTaGGATCATGGGTGGTGGTCTGGGATCTCTGCAGTATTTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSLVLNSASLLLPPA*DHGWWSGISAVFLW Trigger: CCAGAGAAATACTGCAGAGATCCCAGACCACCACCCATGATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGACCAATGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628396.1 ENST00000660275.1 |
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| CDS CCA 90 bp | GGCTCATTGGTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTaGGATCATGGGTGGTGGTCTGGGATCTCAGAGTTAGTAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: GSLVLNSASLLLPPA*DHGWWSGISELVAD Trigger: GTCTGCTACTAACTCTGAGATCCCAGACCACCACCCATGATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGACCAATGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000662008.1 ENST00000665777.1 ENST00000670500.1 |
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| CDS GCA 90 bp | AGCATGATGCTGACTCGTGCTCTCCCAGTGGAAACCCAGCTACTCTaGCAACACTCCTTGCTGTGCAGCCTTCAAGGAGGGCTTCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SMMLTRALPVETQLL*QHSLLCSLQGGLPL Trigger: AAGAGGAAGCCCTCCTTGAAGGCTGCACAGCAAGGAGTGTTGGCAGAGTAGCTGGGTTTCCACTGGGAGAGCACGAGTCAGCATCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS GCA 90 bp | CAGACTGCTTTGCAGCCAAGCTTCTTCTTTGGCAGGGTTTGCCAGTaGTTTGTCATGGGGGAAGGAGGGTGGGATGTGAGCTCTGCATTG | + |
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Preference number: 5 (lower is better) Translates to: QTALQPSFFFGRVCQ*FVMGEGGWDVSSAL Trigger: CAATGCAGAGCTCACATCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS GCA 90 bp | CAGTTCCAGACTGCTTTGCAGCCAAGCTTCTTCTTTGGCAGGGTTTaGCAGTGCTTTGTCATGGGGGAAGGAGGGTGGGATGTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QFQTALQPSFFFGRV*QCFVMGEGGWDVSS Trigger: AGAGCTCACATCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTGGAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS CCA 90 bp | TTCTTTGGCAGGGTTTGCCAGTGCTTTGTCATGGGGGAAGGAGGGTaGGATGTGAGCTCTGCATTGGGTCCTCTTTCCTGGCTCATTGGT | + |
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Preference number: 5 (lower is better) Translates to: FFGRVCQCFVMGEGG*DVSSALGPLSWLIG Trigger: ACCAATGAGCCAGGAAAGAGGACCCAATGCAGAGCTCACATCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS TCA 90 bp | CTTGCAAATTATGATGCTCTGGCAGCAGCAGTGCATATCCATGCTTaGGCCCAGCATGATGCTGACTCGTGCTCTCCCAGTGGAAACCCA | + |
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Preference number: 5 (lower is better) Translates to: LANYDALAAAVHIHA*AQHDADSCSPSGNP Trigger: TGGGTTTCCACTGGGAGAGCACGAGTCAGCATCATGCTGGGCTCAAGCATGGATATGCACTGCTGCTGCCAGAGCATCATAATTTGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CCA 90 bp | AAGGGGTGTGGAGCTTTCACACCCTCTCTGGGCATGACCTCCATGTaGTCAGCAACCTGGAAGCTCTCTGAAGGTCTTCTGTTAAGATTT | + |
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Preference number: 5 (lower is better) Translates to: KGCGAFTPSLGMTSM*SATWKLSEGLLLRF Trigger: AAATCTTAACAGAAGACCTTCAGAGAGCTTCCAGGTTGCTGACCACATGGAGGTCATGCCCAGAGAGGGTGTGAAAGCTCCACACCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS TCA 90 bp | GTCTGGGATCTCAGAGTTAGTAGCAGACCCCACAGGTTAAGAGCTTaGTCCCACAAGACTGCTCCCGCTTCAAATGTTGATGGAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: VWDLRVSSRPHRLRA*SHKTAPASNVDGKS Trigger: GGACTTTCCATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCTCTTAACCTGTGGGGTCTGCTACTAACTCTGAGATCCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000662008.1 ENST00000665777.1 ENST00000670500.1 |
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| CDS TCA 90 bp | CACGTGAAGCACAGAGTTAGTAGCAGACCCCACAGGTTAAGAGCTTaGTCCCACAAGACTGCTCCCGCTTCAAATGTTGATGGAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: HVKHRVSSRPHRLRA*SHKTAPASNVDGKS Trigger: GGACTTTCCATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCTCTTAACCTGTGGGGTCTGCTACTAACTCTGTGCTTCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668976.1 |
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| CDS GCA 90 bp | GTACTCGATAAATGCTTGCAAATTATGATGCTCTGGCAGCAGCAGTaGATATCCATGCTTGAGCCCAGCATGATGCTGACTCGTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: VLDKCLQIMMLWQQQ*ISMLEPSMMLTRAL Trigger: GAGAGCACGAGTCAGCATCATGCTGGGCTCAAGCATGGATATGCACTGCTGCTGCCAGAGCATCATAATTTGCAAGCATTTATCGAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS TCA 90 bp | TTCATTGGATTCAGAGTTAGTAGCAGACCCCACAGGTTAAGAGCTTaGTCCCACAAGACTGCTCCCGCTTCAAATGTTGATGGAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FIGFRVSSRPHRLRA*SHKTAPASNVDGKS Trigger: GGACTTTCCATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCTCTTAACCTGTGGGGTCTGCTACTAACTCTGAATCCAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS GCA 90 bp | CTGCTCCCGCTTCAAATGTTGATGGAAAGTCCAGGTTGTCATGTGTaGTTCTTACCAATGGCTGTAAACCAGAGGTTCATACCATTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LLPLQMLMESPGCHV*FLPMAVNQRFIPFP Trigger: AGGGAATGGTATGAACCTCTGGTTTACAGCCATTGGTAAGAAGCACACATGACAACCTGGACTTTCCATCAACATTTGAAGCGGGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000665777.1 ENST00000668506.1 |
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| CDS TCA 90 bp | ACCAATGGCTGTAAACCAGAGGTTCATACCATTCCCTCCTGGGTTTaGCCATTTGCTGCAGTATTTCTCTGGTTTTGTAGACTCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: TNGCKPEVHTIPSWV*PFAAVFLWFCRLSS Trigger: GGATGAGAGTCTACAAAACCAGAGAAATACTGCAGCAAATGGTCAAACCCAGGAGGGAATGGTATGAACCTCTGGTTTACAGCCATTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653084.1 ENST00000668506.1 |
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| CDS CCA 90 bp | AGGCAAATAAATGGTGGAGAATCATCAACTTGGCCAAAGGAGTGTTaGGTCCATGTGTTCATTGGATTCAGAGTTAGTAGCAGACCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RQINGGESSTWPKEC*VHVFIGFRVSSRPH Trigger: GTGGGGTCTGCTACTAACTCTGAATCCAATGAACACATGGACCCAACACTCCTTTGGCCAAGTTGATGATTCTCCACCATTTATTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS TCA 90 bp | ACCAATGGCTGTAAACCAGAGGTTCATACCATTCCCTCCTGGGTTTaGCCATTTGCTAGAATGGGTCACAGAACTCAGAGAAAGTTCATT | + |
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Preference number: 5 (lower is better) Translates to: TNGCKPEVHTIPSWV*PFARMGHRTQRKFI Trigger: AATGAACTTTCTCTGAGTTCTGTGACCCATTCTAGCAAATGGTCAAACCCAGGAGGGAATGGTATGAACCTCTGGTTTACAGCCATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS GCA 90 bp | TGGAGGCTTCATTACATAGACGTGATTGATGAAATCATTGCCCATTaGAAATTAAGTCAACTTCCAGCCACTTTCCCTTCCCTGGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: WRLHYIDVIDEIIAH*KLSQLPATFPSLEV Trigger: GACCTCCAGGGAAGGGAAAGTGGCTGGAAGTTGACTTAATTTGCAATGGGCAATGATTTCATCAATCACGTCTATGTAATGAAGCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS CCA 90 bp | CAGAGGTTCATACCATTCCCTCCTGGGTTTGACCATTTGCTAGAATaGGTCACAGAACTCAGAGAAAGTTCATTTACAACATTATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QRFIPFPPGFDHLLE*VTELRESSFTTLLL Trigger: AAGCAATAATGTTGTAAATGAACTTTCTCTGAGTTCTGTGACCCATTCTAGCAAATGGTCAAACCCAGGAGGGAATGGTATGAACCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS CCA 90 bp | AGTCAGAAGCTTTCCACGAAAGGTTATATAATGAGTCTCCATCGATaGCTCTATGGAATAGACTGTATTAAAACAAATGCAGTAACTGGA | + |
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Preference number: 5 (lower is better) Translates to: SQKLSTKGYIMSLHR*LYGIDCIKTNAVTG Trigger: TCCAGTTACTGCATTTGTTTTAATACAGTCTATTCCATAGAGCCATCGATGGAGACTCATTATATAACCTTTCGTGGAAAGCTTCTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668506.1 |
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| CDS CCA 72 bp | GTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTaGGATCATGGGTGGTGGTCTGGGATCTTCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VLNSASLLLPPA*DHGWWSGIFWH Trigger: GTGCCAGAAGATCCCAGACCACCACCCATGATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668506.1 ENST00000668976.1 |
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| CDS TCA 72 bp | CTCTGCATTGGGTCCTCTTTCCTGGCTCATTGGTCCTaGATTCCGCTAGCCTGCTGCTTCCTCCAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LCIGSSFLAHWS*IPLACCFLQPG Trigger: CCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGACCAATGAGCCAGGAAAGAGGACCCAATGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS GCA 72 bp | CTGACTCGTGCTCTCCCAGTGGAAACCCAGCTACTCTaGCAACACTCCTTGCTGTGCAGCCTTCAAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LTRALPVETQLL*QHSLLCSLQGG Trigger: CCCTCCTTGAAGGCTGCACAGCAAGGAGTGTTGGCAGAGTAGCTGGGTTTCCACTGGGAGAGCACGAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CCA 72 bp | GTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTaGGATCATGGGTGGTGGTCTGGGATCTCTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: VLNSASLLLPPA*DHGWWSGISAV Trigger: TACTGCAGAGATCCCAGACCACCACCCATGATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628396.1 ENST00000660275.1 |
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| CDS CCA 72 bp | GTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTaGGATCATGGGTGGTGGTCTGGGATCTCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VLNSASLLLPPA*DHGWWSGISSL Trigger: CAAAGAGGAGATCCCAGACCACCACCCATGATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661876.1 |
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| CDS CAA 90 bp | TATCCCGGGTCCAGTTCCAGACTGCTTTGCAGCCAAGCTTCTTCTTaGGCAGGGTTTGCCAGTGCTTTGTCATGGGGGAAGGAGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: YPGSSSRLLCSQASS*AGFASALSWGKEGG Trigger: CCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTGGAACTGGACCCGGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS CCA 72 bp | GTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTaGGATCATGGGTGGTGGTCTGGGATCTCAGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: VLNSASLLLPPA*DHGWWSGISEL Trigger: TAACTCTGAGATCCCAGACCACCACCCATGATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000662008.1 ENST00000665777.1 ENST00000670500.1 |
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| CDS CAA 72 bp | CTCCCAGTGGAAACCCAGCTACTCTGCCAACACTCCTaGCTGTGCAGCCTTCAAGGAGGGCTTCCTCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LPVETQLLCQHS*LCSLQGGLPLS Trigger: GCTAAGAGGAAGCCCTCCTTGAAGGCTGCACAGCAAGGAGTGTTGGCAGAGTAGCTGGGTTTCCACTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CAA 90 bp | CCAGTTCCAGACTGCTTTGCAGCCAAGCTTCTTCTTTGGCAGGGTTaGCCAGTGCTTTGTCATGGGGGAAGGAGGGTGGGATGTGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PVPDCFAAKLLLWQG*PVLCHGGRRVGCEL Trigger: GAGCTCACATCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTGGAACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS CAA 90 bp | TCACTGCCTCCAGGAAGTCTTCACCAGTACCTCTTTCCTGGCTCATaGGTCCTGAATTCCGCTAGCCTGCTGCTTCCTCCAGCCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SLPPGSLHQYLFPGS*VLNSASLLLPPAWD Trigger: ATCCCAGGCTGGAGGAAGCAGCAGGCTAGCGGAATTCAGGACCAATGAGCCAGGAAAGAGGTACTGGTGAAGACTTCCTGGAGGCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628396.1 |
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| CDS CAA 90 bp | ACTCGTGCTCTCCCAGTGGAAACCCAGCTACTCTGCCAACACTCCTaGCTGTGCAGCCTTCAAGGAGGGCTTCCTCTTAGCTGCAATGCA | + |
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Preference number: 6 (lower is better) Translates to: TRALPVETQLLCQHS*LCSLQGGLPLSCNA Trigger: TGCATTGCAGCTAAGAGGAAGCCCTCCTTGAAGGCTGCACAGCAAGGAGTGTTGGCAGAGTAGCTGGGTTTCCACTGGGAGAGCACGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS TCA 72 bp | AAAAGGGGTGTGGAGCTTTCACACCCTCTCTGGGCATaGCCTCCATGTGGTCAGCAACCTGGAAGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KRGVELSHPLWA*PPCGQQPGSSL Trigger: CAGAGAGCTTCCAGGTTGCTGACCACATGGAGGTCATGCCCAGAGAGGGTGTGAAAGCTCCACACCCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS GCA 72 bp | TTGCAGCCAAGCTTCTTCTTTGGCAGGGTTTGCCAGTaGTTTGTCATGGGGGAAGGAGGGTGGGATGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LQPSFFFGRVCQ*FVMGEGGWDVS Trigger: GCTCACATCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS GCA 72 bp | TCCCAGTGGAAACCCAGCTACTCTGCCAACACTCCTTaGTGTGCAGCCTTCAAGGAGGGCTTCCTCTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SQWKPSYSANTP*CAAFKEGFLLA Trigger: AGCTAAGAGGAAGCCCTCCTTGAAGGCTGCACAGCAAGGAGTGTTGGCAGAGTAGCTGGGTTTCCACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CCA 72 bp | GGAGCTTTCACACCCTCTCTGGGCATGACCTCCATGTaGTCAGCAACCTGGAAGCTCTCTGAAGGTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GAFTPSLGMTSM*SATWKLSEGLL Trigger: CAGAAGACCTTCAGAGAGCTTCCAGGTTGCTGACCACATGGAGGTCATGCCCAGAGAGGGTGTGAAAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS CAA 72 bp | GACTGCTTTGCAGCCAAGCTTCTTCTTTGGCAGGGTTaGCCAGTGCTTTGTCATGGGGGAAGGAGGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: DCFAAKLLLWQG*PVLCHGGRRVG Trigger: TCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS TCA 72 bp | TATGATGCTCTGGCAGCAGCAGTGCATATCCATGCTTaGGCCCAGCATGATGCTGACTCGTGCTCTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: YDALAAAVHIHA*AQHDADSCSPS Trigger: ACTGGGAGAGCACGAGTCAGCATCATGCTGGGCTCAAGCATGGATATGCACTGCTGCTGCCAGAGCATCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS GCA 72 bp | ACTGCTTTGCAGCCAAGCTTCTTCTTTGGCAGGGTTTaGCAGTGCTTTGTCATGGGGGAAGGAGGGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: TALQPSFFFGRV*QCFVMGEGGWD Trigger: ATCCCACCCTCCTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS GCA 72 bp | GCTCCTGGTGAATCTATCCCGGGTCCAGTTCCAGACTaGTTTGCAGCCAAGCTTCTTCTTTGGCAGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: APGESIPGPVPD*FAAKLLLWQGL Trigger: CAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTGGAACTGGACCCGGGATAGATTCACCAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS CAA 72 bp | CTGGTGAATCTATCCCGGGTCCAGTTCCAGACTGCTTaGCAGCCAAGCTTCTTCTTTGGCAGGGTTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVNLSRVQFQTA*QPSFFFGRVCQ Trigger: CTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTGGAACTGGACCCGGGATAGATTCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS GCA 72 bp | TTCAAGGAGGGCTTCCTCTTAGCTGCAATGCAGCCTTaGAGTGGCTTGCTAGAAGTGTATAGTGAGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: FKEGFLLAAMQP*SGLLEVYSEAG Trigger: GCCTGCCTCACTATACACTTCTAGCAAGCCACTGCAAGGCTGCATTGCAGCTAAGAGGAAGCCCTCCTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS GCA 72 bp | TTGCTGTGCAGCCTTCAAGGAGGGCTTCCTCTTAGCTaGAATGCAGCCTTGCAGTGGCTTGCTAGAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LLCSLQGGLPLS*NAALQWLARSV Trigger: TACACTTCTAGCAAGCCACTGCAAGGCTGCATTGCAGCTAAGAGGAAGCCCTCCTTGAAGGCTGCACAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CAA 72 bp | TCCAGTTCCAGACTGCTTTGCAGCCAAGCTTCTTCTTaGGCAGGGTTTGCCAGTGCTTTGTCATGGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSRLLCSQASS*AGFASALSWGK Trigger: CTTCCCCCATGACAAAGCACTGGCAAACCCTGCCAAAGAAGAAGCTTGGCTGCAAAGCAGTCTGGAACTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000569713.1 ENST00000653084.1 ENST00000656784.1 ENST00000660275.1 ENST00000661876.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS GCA 72 bp | TCATGGGTGGTGGTCTGGGATCTCCTCTTTGCAGGGTaGAGGAGGATGTGTATGATCTTAACCTTTACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SWVVVWDLLFAG*RRMCMILTFTA Trigger: TGCTGTAAAGGTTAAGATCATACACATCCTCCTGCACCCTGCAAAGAGGAGATCCCAGACCACCACCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661876.1 |
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| CDS TCA 72 bp | CTCAGAGTTAGTAGCAGACCCCACAGGTTAAGAGCTTaGTCCCACAAGACTGCTCCCGCTTCAAATGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LRVSSRPHRLRA*SHKTAPASNVD Trigger: ATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCTCTTAACCTGTGGGGTCTGCTACTAACTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000662008.1 ENST00000665777.1 ENST00000670500.1 |
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| CDS TCA 72 bp | ATGGGTGGTGGTCTGGGATCTTCTGGCACTAAAATGTaGGCTAGGGCAGTCAGCTATAACTCAAAAGTCACG | + |
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Preference number: 6 (lower is better) Translates to: MGGGLGSSGTKM*ARAVSYNSKVT Trigger: CGTGACTTTTGAGTTATAGCTGACTGCCCTAGCTCACATTTTAGTGCCAGAAGATCCCAGACCACCACCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000668506.1 ENST00000668976.1 |
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| CDS TCA 72 bp | CACAGAGTTAGTAGCAGACCCCACAGGTTAAGAGCTTaGTCCCACAAGACTGCTCCCGCTTCAAATGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: HRVSSRPHRLRA*SHKTAPASNVD Trigger: ATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCTCTTAACCTGTGGGGTCTGCTACTAACTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668976.1 |
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| CDS CAA 90 bp | TCCCACAAGACTGCTCCCGCTTCAAATGTTGATGGAAAGTCCAGGTaGTCATGTGTGCTTCTTACCAATGGCTGTAAACCAGAGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SHKTAPASNVDGKSR*SCVLLTNGCKPEVH Trigger: ATGAACCTCTGGTTTACAGCCATTGGTAAGAAGCACACATGACAACCTGGACTTTCCATCAACATTTGAAGCGGGAGCAGTCTTGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000665777.1 ENST00000668506.1 |
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| CDS CAA 90 bp | TCCCACAAGACTGCTCCCGCTTCAAATGTTGATGGAAAGTCCAGGTaGTCATGTGTGCTTCTTACCAATGGCTGCAGTATTTCTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: SHKTAPASNVDGKSR*SCVLLTNGCSISLV Trigger: AACCAGAGAAATACTGCAGCCATTGGTAAGAAGCACACATGACAACCTGGACTTTCCATCAACATTTGAAGCGGGAGCAGTCTTGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000670500.1 |
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| CDS TCA 72 bp | AGCTTGATCCCACAAGACTGCTCCCGCTTCAAATGTTaGTGGAAAGTCCAGGTTGTCATGTGTGCTTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: SLIPQDCSRFKC*WKVQVVMCASY Trigger: GTAAGAAGCACACATGACAACCTGGACTTTCCATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000661626.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS TCA 72 bp | TTCAGAGTTAGTAGCAGACCCCACAGGTTAAGAGCTTaGTCCCACAAGACTGCTCCCGCTTCAAATGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FRVSSRPHRLRA*SHKTAPASNVD Trigger: ATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCTCTTAACCTGTGGGGTCTGCTACTAACTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CAA 72 bp | GAGCTTGATCCCACAAGACTGCTCCCGCTTCAAATGTaGATGGAAAGTCCAGGTTGTCATGTGTGCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: ELDPTRLLPLQM*MESPGCHVCFL Trigger: TAAGAAGCACACATGACAACCTGGACTTTCCATCAACATTTGAAGCGGGAGCAGTCTTGTGGGATCAAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653084.1 ENST00000656784.1 ENST00000661626.1 ENST00000662008.1 ENST00000665777.1 ENST00000668506.1 ENST00000668976.1 ENST00000670500.1 |
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| CDS CAA 72 bp | CAGAGGTTCATACCATTCCCTCCTGGGTTTGACCATTaGCACTTAGGACATTCCAAGGACTTTAGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: QRFIPFPPGFDH*HLGHSKDFRSS Trigger: AGAGCTCCTAAAGTCCTTGGAATGTCCTAAGTGCAAATGGTCAAACCCAGGAGGGAATGGTATGAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656784.1 |
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| CDS CAA 72 bp | GTGAGGCAGGCAAATAAATGGTGGAGAATCATCAACTaGGCCAAAGGAGTGTTGGGTCCATGTGTTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: VRQANKWWRIIN*AKGVLGPCVHW Trigger: CCAATGAACACATGGACCCAACACTCCTTTGGCCAAGTTGATGATTCTCCACCATTTATTTGCCTGCCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS CAA 90 bp | GCTGTAAACCAGAGGTTCATACCATTCCCTCCTGGGTTTGACCATTaGCTGCAGTATTTCTCTGGTTTTGTAGACTCTCATCCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVNQRFIPFPPGFDH*LQYFSGFVDSHPFQ Trigger: CTGGAAAGGATGAGAGTCTACAAAACCAGAGAAATACTGCAGCAAATGGTCAAACCCAGGAGGGAATGGTATGAACCTCTGGTTTACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653084.1 ENST00000668506.1 |
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| CDS CAA 90 bp | GCTGTAAACCAGAGGTTCATACCATTCCCTCCTGGGTTTGACCATTaGCACTTAGGACATTCCAAGGACTTTAGGAGCTCTGCAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: AVNQRFIPFPPGFDH*HLGHSKDFRSSAVF Trigger: AAATACTGCAGAGCTCCTAAAGTCCTTGGAATGTCCTAAGTGCAAATGGTCAAACCCAGGAGGGAATGGTATGAACCTCTGGTTTACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656784.1 |
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| CDS CCA 72 bp | TGGAAAGTCCAGGTTGTCATGTGTGCTTCTTACCAATaGCACTTAGGACATTCCAAGGACTTTAGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: WKVQVVMCASYQ*HLGHSKDFRSS Trigger: AGAGCTCCTAAAGTCCTTGGAATGTCCTAAGTGCCATTGGTAAGAAGCACACATGACAACCTGGACTTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662008.1 ENST00000668976.1 |
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| CDS CAA 72 bp | GTGTCCCAGTTTAGAAGGCTAACTGCCAGAAGTTTATaGTGTGCAAGTGTAGCAATTTCTAGTTTCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VSQFRRLTARSL*CASVAISSFRR Trigger: CCTGCGGAAACTAGAAATTGCTACACTTGCACACAATAAACTTCTGGCAGTTAGCCTTCTAAACTGGGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS TCA 72 bp | TTAGATGAAGGGTACTCGATAAATGCTTGCAAATTATaGTGCTCTGGCAGCAGCAGTGCATATCCATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LDEGYSINACKL*CSGSSSAYPCL Trigger: CAAGCATGGATATGCACTGCTGCTGCCAGAGCATCATAATTTGCAAGCATTTATCGAGTACCCTTCATCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS GCA 72 bp | CTTCAAATGTTGATGGAAAGTCCAGGTTGTCATGTGTaGTTCTTACCAATGGCTGCAGTATTTCTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LQMLMESPGCHV*FLPMAAVFLWF Trigger: AAACCAGAGAAATACTGCAGCCATTGGTAAGAAGCACACATGACAACCTGGACTTTCCATCAACATTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000670500.1 |
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| CDS CCA 72 bp | ATACCATTCCCTCCTGGGTTTGACCATTTGCTAGAATaGGTCACAGAACTCAGAGAAAGTTCATTTACAACA | + |
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Preference number: 6 (lower is better) Translates to: IPFPPGFDHLLE*VTELRESSFTT Trigger: TGTTGTAAATGAACTTTCTCTGAGTTCTGTGACCCATTCTAGCAAATGGTCAAACCCAGGAGGGAATGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS CAA 90 bp | CAAATGGTAGTGTCCCAGTTTAGAAGGCTAACTGCCAGAAGTTTATaGTGTGCAAGTGTAGCAATTTCTAGTTTCCGCAGGATGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: QMVVSQFRRLTARSL*CASVAISSFRRMKI Trigger: AATTTTCATCCTGCGGAAACTAGAAATTGCTACACTTGCACACAATAAACTTCTGGCAGTTAGCCTTCTAAACTGGGACACTACCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661626.1 ENST00000668506.1 |
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| CDS GCA 72 bp | CATTACATAGACGTGATTGATGAAATCATTGCCCATTaGAAATTAAGTCAACTTCCAGCCACTTTCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HYIDVIDEIIAH*KLSQLPATFPS Trigger: GGAAGGGAAAGTGGCTGGAAGTTGACTTAATTTGCAATGGGCAATGATTTCATCAATCACGTCTATGTAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665777.1 |
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| CDS CCA 72 bp | CTTTCCACGAAAGGTTATATAATGAGTCTCCATCGATaGCTCTATGGAATAGACTGTATTAAAACAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: LSTKGYIMSLHR*LYGIDCIKTNA Trigger: TGCATTTGTTTTAATACAGTCTATTCCATAGAGCCATCGATGGAGACTCATTATATAACCTTTCGTGGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668506.1 |
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